MC03g0558 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0558
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein PHLOEM PROTEIN 2-LIKE A9-like
LocationMC03: 12343863 .. 12344021 (-)
RNA-Seq ExpressionMC03g0558
SyntenyMC03g0558
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAGCAGTGCAACTTTTGCAAGTTTCATGGCTTTCAACAGATAATGCAGAGGTTTATGGGAAGAAGTACAAAGTGGGCTTCAATGTGATCACTGTAACCAGATGCTTTGGGTGGAATAATAATGGGCTTGCAGTTTACATCATGGCTAAGAATGGAAGA

mRNA sequence

TCAGCAGTGCAACTTTTGCAAGTTTCATGGCTTTCAACAGATAATGCAGAGGTTTATGGGAAGAAGTACAAAGTGGGCTTCAATGTGATCACTGTAACCAGATGCTTTGGGTGGAATAATAATGGGCTTGCAGTTTACATCATGGCTAAGAATGGAAGA

Coding sequence (CDS)

TCAGCAGTGCAACTTTTGCAAGTTTCATGGCTTTCAACAGATAATGCAGAGGTTTATGGGAAGAAGTACAAAGTGGGCTTCAATGTGATCACTGTAACCAGATGCTTTGGGTGGAATAATAATGGGCTTGCAGTTTACATCATGGCTAAGAATGGAAGA

Protein sequence

SAVQLLQVSWLSTDNAEVYGKKYKVGFNVITVTRCFGWNNNGLAVYIMAKNGR
Homology
BLAST of MC03g0558 vs. NCBI nr
Match: XP_022142415.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 2.60e-09
Identity = 34/57 (59.65%), Postives = 38/57 (66.67%), Query Frame = 0

Query: 1   SAVQLLQVSWL----STDNAEVYGKKYKVGFNVITVTRCFGWNNNGLAVYIMAKNGR 53
           S  +L QVSWL    STDN EV GKKYKVGFNV      FGWN  G+ VY+MAK G+
Sbjct: 52  SVAELKQVSWLEVTCSTDNVEV-GKKYKVGFNVSMKPDAFGWN--GIEVYVMAKVGK 105

BLAST of MC03g0558 vs. NCBI nr
Match: XP_023541318.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 53.9 bits (128), Expect = 5.83e-07
Identity = 30/54 (55.56%), Postives = 36/54 (66.67%), Query Frame = 0

Query: 4   QLLQVSWL----STDNAEVYGKKYKVGFNVITVTRCFGWNNNGLAVYIMAKNGR 53
           +L QVSWL    STD  E +GK+YKVGFNV+     FGW   GL VY+MAK G+
Sbjct: 55  ELKQVSWLEVTCSTDKVE-FGKRYKVGFNVLLRPDAFGWK--GLDVYVMAKVGK 105

BLAST of MC03g0558 vs. NCBI nr
Match: KAG6573454.1 (Protein PHLOEM PROTEIN 2-LIKE A9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 52.4 bits (124), Expect = 2.10e-06
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0

Query: 4   QLLQVSWL----STDNAEVYGKKYKVGFNVITVTRCFGWNNNGLAVYIMAKNGR 53
           +L QVSWL    STD  E +GK+YKVGFNV      FGW   GL VY+MAK G+
Sbjct: 50  ELKQVSWLEVTCSTDKVE-FGKRYKVGFNVSLRPDAFGWK--GLDVYVMAKVGK 100

BLAST of MC03g0558 vs. NCBI nr
Match: KAG7012601.1 (Protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 52.4 bits (124), Expect = 2.64e-06
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0

Query: 4   QLLQVSWL----STDNAEVYGKKYKVGFNVITVTRCFGWNNNGLAVYIMAKNGR 53
           +L QVSWL    STD  E +GK+YKVGFNV      FGW   GL VY+MAK G+
Sbjct: 68  ELKQVSWLEVTCSTDKVE-FGKRYKVGFNVSLRPDAFGWK--GLDVYVMAKVGK 118

BLAST of MC03g0558 vs. NCBI nr
Match: XP_023880760.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Quercus suber])

HSP 1 Score: 49.7 bits (117), Expect = 2.73e-05
Identity = 26/55 (47.27%), Postives = 32/55 (58.18%), Query Frame = 0

Query: 1   SAVQLLQVSWLSTDNA--EVYGKKYKVGFNVITVTRCFGWNNNGLAVYIMAKNGR 53
           S  +L+QVSWL        V GKKY++GF V      FGWN  G  VY+MAK G+
Sbjct: 56  SPAELIQVSWLEVTGTFDGVKGKKYEIGFEVSLTPDAFGWN--GCHVYVMAKVGK 108

BLAST of MC03g0558 vs. ExPASy TrEMBL
Match: A0A6J1CKW1 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012556 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.26e-09
Identity = 34/57 (59.65%), Postives = 38/57 (66.67%), Query Frame = 0

Query: 1   SAVQLLQVSWL----STDNAEVYGKKYKVGFNVITVTRCFGWNNNGLAVYIMAKNGR 53
           S  +L QVSWL    STDN EV GKKYKVGFNV      FGWN  G+ VY+MAK G+
Sbjct: 52  SVAELKQVSWLEVTCSTDNVEV-GKKYKVGFNVSMKPDAFGWN--GIEVYVMAKVGK 105

BLAST of MC03g0558 vs. ExPASy TrEMBL
Match: A0A6J1K417 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC111490460 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.46e-04
Identity = 27/56 (48.21%), Postives = 32/56 (57.14%), Query Frame = 0

Query: 2   AVQLLQVSWL----STDNAEVYGKKYKVGFNVITVTRCFGWNNNGLAVYIMAKNGR 53
           A +L QVSWL    S D    YGK YKVGF V      FGW +  + VY+MAK G+
Sbjct: 49  AAELKQVSWLEVACSIDKKLKYGKTYKVGFEVSLKPDAFGWKD--VDVYVMAKVGK 102

BLAST of MC03g0558 vs. ExPASy TrEMBL
Match: A0A5B7A104 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_018939 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 1.94e-04
Identity = 27/57 (47.37%), Postives = 33/57 (57.89%), Query Frame = 0

Query: 1  SAVQLLQVSWL----STD-NAEVYGKKYKVGFNVITVTRCFGWNNNGLAVYIMAKNG 52
          S  +LLQV WL    STD N    GKKYK+GFNV   +  FGW  +   + +MAK G
Sbjct: 8  SPAELLQVRWLQVISSTDTNKLTAGKKYKIGFNVALTSDAFGWGPDS-NILVMAKIG 63

BLAST of MC03g0558 vs. ExPASy TrEMBL
Match: A0A5B7A1B0 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_018937 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 3.05e-04
Identity = 27/57 (47.37%), Postives = 33/57 (57.89%), Query Frame = 0

Query: 1  SAVQLLQVSWL----STD-NAEVYGKKYKVGFNVITVTRCFGWNNNGLAVYIMAKNG 52
          S  +LLQV WL    STD N    GKKYK+GFNV   +  FGW  +   + +MAK G
Sbjct: 43 SPAELLQVRWLQVISSTDTNKLTAGKKYKIGFNVALTSDAFGWGPDS-NILVMAKIG 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022142415.12.60e-0959.65protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia][more]
XP_023541318.15.83e-0755.56protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita pepo subsp. pepo][more]
KAG6573454.12.10e-0655.56Protein PHLOEM PROTEIN 2-LIKE A9, partial [Cucurbita argyrosperma subsp. sororia... [more]
KAG7012601.12.64e-0655.56Protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023880760.12.73e-0547.27protein PHLOEM PROTEIN 2-LIKE A9-like [Quercus suber][more]
Match NameE-valueIdentityDescription
A0A6J1CKW11.26e-0959.65protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A6J1K4171.46e-0448.21protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC11149046... [more]
A0A5B7A1041.94e-0447.37Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_018939 PE=4 SV=1[more]
A0A5B7A1B03.05e-0447.37Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_018937 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0558.1MC03g0558.1mRNA