MC03g0292 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0292
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionmicrotubule-associated proteins 70-1
LocationMC03: 8767049 .. 8767174 (+)
RNA-Seq ExpressionMC03g0292
SyntenyMC03g0292
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTATGTCCTTCACGAAGAAAGGAAAAACTTGACGAAGAGTTACTCTTGCCAAAGTAACAACCATTTGACTGTACTTGTAGCAAATGAATGGAAAGATGCAATTGACAAGGTTATGCCACTAAAA

mRNA sequence

TTCTATGTCCTTCACGAAGAAAGGAAAAACTTGACGAAGAGTTACTCTTGCCAAAGTAACAACCATTTGACTGTACTTGTAGCAAATGAATGGAAAGATGCAATTGACAAGGTTATGCCACTAAAA

Coding sequence (CDS)

TTCTATGTCCTTCACGAAGAAAGGAAAAACTTGACGAAGAGTTACTCTTGCCAAAGTAACAACCATTTGACTGTACTTGTAGCAAATGAATGGAAAGATGCAATTGACAAGGTTATGCCACTAAAA

Protein sequence

FYVLHEERKNLTKSYSCQSNNHLTVLVANEWKDAIDKVMPLK
Homology
[Close]
BLAST of MC03g0292 vs. TAIR 10
Match: AT1G24764.1 (microtubule-associated proteins 70-2 )

HSP 1 Score: 40.4 bits (93), Expect = 4.1e-04
Identity = 20/44 (45.45%), Postives = 28/44 (63.64%), Query Frame = 0 

Query: 1   FYVLHEERKNLTKSYSCQ--SNNHLTVLVANEWKDAIDKVMPLK 43
           F  ++EERK L +  +    + N +  +VANEWKD  DKVMP+K
Sbjct: 301 FQEMNEERKTLDRELARAKVTANRVATVVANEWKDGNDKVMPVK 344

[Close]
BLAST of MC03g0292 vs. TAIR 10
Match: AT1G68060.1 (microtubule-associated proteins 70-1 )

HSP 1 Score: 40.4 bits (93), Expect = 4.1e-04
Identity = 20/44 (45.45%), Postives = 28/44 (63.64%), Query Frame = 0 

Query: 1   FYVLHEERKNLTKSYSCQ--SNNHLTVLVANEWKDAIDKVMPLK 43
           F  ++EERK L +  +    + N +  +VANEWKD  DKVMP+K
Sbjct: 293 FQEMNEERKTLDRELARAKVTANRVATVVANEWKDGNDKVMPVK 336

The following BLAST results are available for this feature:
BLAST of MC03g0292 vs.
Match NameE-valueIdentityDescription
BLAST of MC03g0292 vs.
Match NameE-valueIdentityDescription
BLAST of MC03g0292 vs.
Match NameE-valueIdentityDescription
BLAST of MC03g0292 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G24764.14.1e-0445.45microtubule-associated proteins 70-2 [more]
AT1G68060.14.1e-0445.45microtubule-associated proteins 70-1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009768Microtubule-associated protein 70PFAMPF07058MAP70coord: 4..42
e-value: 3.0E-7
score: 29.6

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0292.1MC03g0292.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007010 cytoskeleton organization
molecular_function GO:0008017 microtubule binding