MC02g_new0344 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g_new0344
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 14465218 .. 14465964 (+)
RNA-Seq ExpressionMC02g_new0344
SyntenyMC02g_new0344
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCTTTATTACCTCAAACACAGTCCCGATGATAACTTTCAATTTTATCTTAGTTCTCGGAACCAGGTTCTCGTTATGGGTCCTTCCTCAGTGAAGCATTGGAAGAGTGAGTGGTTCTTTGTCGGTGGCGATTGGTTAGCCCGTGACGAGGGAGGACTATACTTTCTCGTCCCGACTGAGTGTAGGGAGTTAGCTAAGTAGATTCCCGAGCTCTATCAAGACTTTCGTAGATATCTATTATGATATTTCTCTTTTTTGTTGACAGTTTCCCGTAATTGTGAGCTTACTGTCGATGCATTCAATTTCTACCATACTGTTATCCAGTACCCAGATACCGAGTGTTGGGGTCCATATCTGGTTAAGGAGCAGAACTTATTGGACTTTGGCTTGGCTCCCCCTCATAACCCTCCAGGTACTTGTCGAAATCCTTTTTTCGTTTTGCGTGAAAGTCGATTTTTACATTTATCTCTACTTGTAGAAACGTCGAGACGGAGTGCTTCCCTGTATGAAAGAGAACGCCGCTGAAACACTCGATGTTCGAGAGCCGGCTCTAGCCGGGCTTTGGATATCGATATGACTGACTTGACCGAGGAAGGACCCCCTTCTCAACATGCTCGCTCCTCTATGCCTCCTACAGTCCCGAGGCATTCCGCTCGACTTCATGGGACGTCTATCCCGTCAGCCCCTCGAGGTTATCCAGGGAGCTCCTCCTGGAAAGGGCATTTAGCCTTTAGCAATGGCTGA

mRNA sequence

ATGTTGCTTTATTACCTCAAACACAGTCCCGATGATAACTTTCAATTTTATCTTAGTTCTCGGAACCAGGTTCTCGTTATGGGTCCTTCCTCAGTGAAGCATTGGAAGAGTGAGTGGTTCTTTGTCGGTGGCGATTGGTTAGCCCGTGACGAGGGAGGACTATACTTTCTCGTCCCGACTGAGTTTTCCCGTAATTGTGAGCTTACTGTCGATGCATTCAATTTCTACCATACTGTTATCCAGTACCCAGATACCGAGTGTTGGGGTCCATATCTGGTTAAGGAGCAGAACTTATTGGACTTTGGCTTGGCTCCCCCTCATAACCCTCCAGGACCCCCTTCTCAACATGCTCGCTCCTCTATGCCTCCTACAGTCCCGAGGCATTCCGCTCGACTTCATGGGACGTCTATCCCGTCAGCCCCTCGAGGTTATCCAGGGAGCTCCTCCTGGAAAGGGCATTTAGCCTTTAGCAATGGCTGA

Coding sequence (CDS)

ATGTTGCTTTATTACCTCAAACACAGTCCCGATGATAACTTTCAATTTTATCTTAGTTCTCGGAACCAGGTTCTCGTTATGGGTCCTTCCTCAGTGAAGCATTGGAAGAGTGAGTGGTTCTTTGTCGGTGGCGATTGGTTAGCCCGTGACGAGGGAGGACTATACTTTCTCGTCCCGACTGAGTTTTCCCGTAATTGTGAGCTTACTGTCGATGCATTCAATTTCTACCATACTGTTATCCAGTACCCAGATACCGAGTGTTGGGGTCCATATCTGGTTAAGGAGCAGAACTTATTGGACTTTGGCTTGGCTCCCCCTCATAACCCTCCAGGACCCCCTTCTCAACATGCTCGCTCCTCTATGCCTCCTACAGTCCCGAGGCATTCCGCTCGACTTCATGGGACGTCTATCCCGTCAGCCCCTCGAGGTTATCCAGGGAGCTCCTCCTGGAAAGGGCATTTAGCCTTTAGCAATGGCTGA

Protein sequence

MLLYYLKHSPDDNFQFYLSSRNQVLVMGPSSVKHWKSEWFFVGGDWLARDEGGLYFLVPTEFSRNCELTVDAFNFYHTVIQYPDTECWGPYLVKEQNLLDFGLAPPHNPPGPPSQHARSSMPPTVPRHSARLHGTSIPSAPRGYPGSSSWKGHLAFSNG
Homology
BLAST of MC02g_new0344 vs. NCBI nr
Match: XP_022156747.1 (uncharacterized protein LOC111023586 [Momordica charantia])

HSP 1 Score: 83.6 bits (205), Expect = 3.19e-15
Identity = 44/75 (58.67%), Postives = 48/75 (64.00%), Query Frame = 0

Query: 41   FVGGDWLA-----RDEGGLYFLVPTEFSRNCELTVDAFNFYHTVIQYPDTECWGPYLVKE 100
            F+  DW +     R   G  F V    SRNCELT +A  FYHTVIQ PD E WGP LV E
Sbjct: 981  FIDSDWASDPDDRRSTSG--FCVYLGVSRNCELTNEASTFYHTVIQLPDIERWGPDLVTE 1040

Query: 101  QNLLDFGLAPPHNPP 110
            QNL+DFGLA PHNPP
Sbjct: 1041 QNLVDFGLALPHNPP 1053

BLAST of MC02g_new0344 vs. NCBI nr
Match: XP_038891101.1 (uncharacterized protein LOC120080500 [Benincasa hispida])

HSP 1 Score: 60.5 bits (145), Expect = 2.84e-08
Identity = 30/91 (32.97%), Postives = 44/91 (48.35%), Query Frame = 0

Query: 17  YLSSRNQVLVMGPSSVKHWKSEWFFVGGDWLARDEGGLYFLVPTEFS----RNCELTVDA 76
           Y+ +  + L+   SSVKHW   WFF  GDWL+ DE G+ ++VPT F     R    +  A
Sbjct: 24  YIVAHKKALMCNVSSVKHWTEHWFFARGDWLSTDEAGMCYVVPTRFRDFVPRKFSCSTIA 83

Query: 77  FNFYHTVIQYPDTECWGPYLVKEQNLLDFGL 103
            N    +         G   + ++NL+  GL
Sbjct: 84  RNLARAIQSSNKETKHGSNFISQENLILVGL 114

BLAST of MC02g_new0344 vs. NCBI nr
Match: XP_022151345.1 (uncharacterized protein LOC111019307 [Momordica charantia])

HSP 1 Score: 52.4 bits (124), Expect = 2.28e-05
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0

Query: 15 QFYLSSRNQV--LVMGPSSVKHWKSEWFFVGGDWLARDEGGLYFL-VPTEFSR 64
          +FY+ +R     +V GP+S+K W  +WF+  G+WLA+DE G  F+ VPT F  
Sbjct: 46 RFYMCARKGACGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFIDVPTRFGN 98

BLAST of MC02g_new0344 vs. NCBI nr
Match: XP_022158122.1 (uncharacterized protein LOC111024680 [Momordica charantia])

HSP 1 Score: 53.1 bits (126), Expect = 4.33e-05
Identity = 36/101 (35.64%), Postives = 53/101 (52.48%), Query Frame = 0

Query: 15  QFYLSSRNQV--LVMGPSSVKHWKSEWFFVGGDWLARDEGGL-YFLVPTEFSRNC----- 74
           +FY+ +R     +V GP+S+K W  +WF+  G+WLA+DE G  +F VPT F         
Sbjct: 76  RFYMCARKGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVSIRPV 135

Query: 75  -ELT---VDAFNFYHTVIQYPDTECWGPYLVKEQNLLDFGL 103
            ELT    D   +Y    ++P     G  LV ++ LL+ GL
Sbjct: 136 PELTQASFDTLKYYKE--RFPRGRKVGT-LVTDELLLESGL 173

BLAST of MC02g_new0344 vs. NCBI nr
Match: XP_022155229.1 (uncharacterized protein LOC111022371 [Momordica charantia])

HSP 1 Score: 52.0 bits (123), Expect = 6.79e-05
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0

Query: 15  QFYLSSRNQV--LVMGPSSVKHWKSEWFFVGGDWLARDEGGL-YFLVPTEFSR 64
           +FY+ +R     +V GP+S+K W  +WF+  G+WLA+DE G  +F VPT F  
Sbjct: 76  RFYMCARKGAXGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGN 128

BLAST of MC02g_new0344 vs. ExPASy TrEMBL
Match: A0A6J1DSS1 (uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023586 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.54e-15
Identity = 44/75 (58.67%), Postives = 48/75 (64.00%), Query Frame = 0

Query: 41   FVGGDWLA-----RDEGGLYFLVPTEFSRNCELTVDAFNFYHTVIQYPDTECWGPYLVKE 100
            F+  DW +     R   G  F V    SRNCELT +A  FYHTVIQ PD E WGP LV E
Sbjct: 981  FIDSDWASDPDDRRSTSG--FCVYLGVSRNCELTNEASTFYHTVIQLPDIERWGPDLVTE 1040

Query: 101  QNLLDFGLAPPHNPP 110
            QNL+DFGLA PHNPP
Sbjct: 1041 QNLVDFGLALPHNPP 1053

BLAST of MC02g_new0344 vs. ExPASy TrEMBL
Match: A0A6J1DAX1 (uncharacterized protein LOC111019307 OS=Momordica charantia OX=3673 GN=LOC111019307 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.10e-05
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0

Query: 15 QFYLSSRNQV--LVMGPSSVKHWKSEWFFVGGDWLARDEGGLYFL-VPTEFSR 64
          +FY+ +R     +V GP+S+K W  +WF+  G+WLA+DE G  F+ VPT F  
Sbjct: 46 RFYMCARKGACGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFIDVPTRFGN 98

BLAST of MC02g_new0344 vs. ExPASy TrEMBL
Match: A0A6J1DWD2 (uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024680 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.10e-05
Identity = 36/101 (35.64%), Postives = 53/101 (52.48%), Query Frame = 0

Query: 15  QFYLSSRNQV--LVMGPSSVKHWKSEWFFVGGDWLARDEGGL-YFLVPTEFSRNC----- 74
           +FY+ +R     +V GP+S+K W  +WF+  G+WLA+DE G  +F VPT F         
Sbjct: 76  RFYMCARKGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVSIRPV 135

Query: 75  -ELT---VDAFNFYHTVIQYPDTECWGPYLVKEQNLLDFGL 103
            ELT    D   +Y    ++P     G  LV ++ LL+ GL
Sbjct: 136 PELTQASFDTLKYYKE--RFPRGRKVGT-LVTDELLLESGL 173

BLAST of MC02g_new0344 vs. ExPASy TrEMBL
Match: A0A6J1DPM7 (uncharacterized protein LOC111022371 OS=Momordica charantia OX=3673 GN=LOC111022371 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.29e-05
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0

Query: 15  QFYLSSRNQV--LVMGPSSVKHWKSEWFFVGGDWLARDEGGL-YFLVPTEFSR 64
           +FY+ +R     +V GP+S+K W  +WF+  G+WLA+DE G  +F VPT F  
Sbjct: 76  RFYMCARKGAXGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGN 128

BLAST of MC02g_new0344 vs. ExPASy TrEMBL
Match: A0A6J1DPT7 (uncharacterized protein LOC111023202 OS=Momordica charantia OX=3673 GN=LOC111023202 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 3.67e-05
Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 0

Query: 25  LVMGPSSVKHWKSEWFFVGGDWLARDEGGL-YFLVPTEFSRNC------ELT---VDAFN 84
           +V GP+S+K W  +WF+  G+WLA+DE G  +F VPT F          ELT    D   
Sbjct: 10  IVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTXFGNLVSIRPVPELTQASFDTLK 69

Query: 85  FYHTVIQYPDTECWGPYLVKEQNLLDFGLAPPHNPPGPPSQHAR 118
           +Y    ++P     G  LV ++ LL+ GL   +NP   P + +R
Sbjct: 70  YYKE--RFPRGRKVGT-LVTDELLLESGLLD-YNPAVXPIESSR 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022156747.13.19e-1558.67uncharacterized protein LOC111023586 [Momordica charantia][more]
XP_038891101.12.84e-0832.97uncharacterized protein LOC120080500 [Benincasa hispida][more]
XP_022151345.12.28e-0543.40uncharacterized protein LOC111019307 [Momordica charantia][more]
XP_022158122.14.33e-0535.64uncharacterized protein LOC111024680 [Momordica charantia][more]
XP_022155229.16.79e-0543.40uncharacterized protein LOC111022371 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1DSS11.54e-1558.67uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DAX11.10e-0543.40uncharacterized protein LOC111019307 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6J1DWD22.10e-0535.64uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DPM73.29e-0543.40uncharacterized protein LOC111022371 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DPT73.67e-0535.58uncharacterized protein LOC111023202 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..148

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g_new0344.1MC02g_new0344.1mRNA