MC02g_new0152 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g_new0152
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	auxin-responsive protein SAUR23-like
Location	MC02: 7009199 .. 7010331 (-)
RNA-Seq Expression	MC02g_new0152
Synteny	MC02g_new0152

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATGGACGATCTGTTCTCCCATTTTCTATGTAATACACTGTCTGTAAACAATAAATTCAGAATGAAAAGCTTGGACAATGATTTGACTTGTGATAATTGAACAACTTGGCTAATGAAAATGGAACTTTGTGGTGTAAACTGCAAGAATGTGGAGGGTGAGAGAGGGAAATTGGTGCGACTTTTCTAAGGTGAACAAAACCATGTGAAGGGGTCTACTCAAATACCTAACCATCAGACTTCAATACCCCACTTGGTCATTTGAACATTTCCAATCTTCAACATCACTCTTTCTTCAAAATCTCTATAAATATGAACATCAAATGAGCCTTGAAACGCCAAATTCAACTCAGTTCAAGTGTTGATTTCTCTTCCAGTTGGTTCTATACCAATCAGAGCTTTAAACCTTTCTAGCAGTGTTTCATCGTGAGAAAATGGGGATCCGATTGCTTTCCTTGGTTCCTCATGCCAAGCACATCCTAAAGATGCAGTCAGGTTTCACCAAAAATCATTTGGATGTGCCAAAGGGTCATGTGGCAGTTTATGTGGGAGAGATCCAAAGGAAACGGTTCGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAACAACTACTCAGCCATGCTGAGGAAGAGTTTGGATTCCATCATCCACAGGGGGGTCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCATCTTGAAGAATGAAGAGCAAAGCGCAGTCTGCCATTTTTGACAAACGTTTCTTGTTTTTTTTCAACTCGTTTACTTTTTGACACAGGCTAGAGTGTTGTAGAGTGGGAAACATTCCTTCCTGTAAATGAGTCGCATTGTAAAGGTACATTTACCAACAGGATTAATGAAAAATATATCAATTCAGCATGAATTTCTTATAGCTTATTTGTTGGTGATCTATCTGTGATGGCTAATCCGAGCTGTTGGAAAGAAATAAAAATTGTTGCTAGATTTATTATTATATACCAAAAGCAAACTTCAAACATTAAACATATCCAAAGAGAAACGGATTACCACGCTTCTCTTAGTTTCTGTTGAAACTTCGAATCCCTTGGTTGATTTAATAAACACATCCACATCCTTCCACGGTTCCAAC

mRNA sequence

ATGGGGATCCGATTGCTTTCCTTGGTTCCTCATGCCAAGCACATCCTAAAGATGCAGTCAGGTTTCACCAAAAATCATTTGGATGTGCCAAAGGGTCATGTGGCAGTTTATGTGGGAGAGATCCAAAGGAAACGGTTCGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAACAACTACTCAGCCATGCTGAGGAAGAGTTTGGATTCCATCATCCACAGGGGGGTCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCATCTTGAAGAATGA

Coding sequence (CDS)

ATGGGGATCCGATTGCTTTCCTTGGTTCCTCATGCCAAGCACATCCTAAAGATGCAGTCAGGTTTCACCAAAAATCATTTGGATGTGCCAAAGGGTCATGTGGCAGTTTATGTGGGAGAGATCCAAAGGAAACGGTTCGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAACAACTACTCAGCCATGCTGAGGAAGAGTTTGGATTCCATCATCCACAGGGGGGTCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCATCTTGAAGAATGA

Protein sequence

MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE

Homology

[Close]

BLAST of MC02g_new0152 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.1e-24
Identity = 49/66 (74.24%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRLH 96
          +TSRLH
Sbjct: 85 VTSRLH 90

[Close]

BLAST of MC02g_new0152 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-23
Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 12 AKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRL 95
           HP GGLTIPC ED FI++TSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of MC02g_new0152 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSR 94
          +TSR
Sbjct: 85 VTSR 88

[Close]

BLAST of MC02g_new0152 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 90 LTSRL 95
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of MC02g_new0152 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.6e-22
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI+
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRL 95
          +TSRL
Sbjct: 83 VTSRL 87

[Close]

BLAST of MC02g_new0152 vs. NCBI nr
Match: XP_022146161.1 (auxin-responsive protein SAUR23-like [Momordica charantia])

HSP 1 Score: 204 bits (519), Expect = 2.60e-66
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE 98

[Close]

BLAST of MC02g_new0152 vs. NCBI nr
Match: XP_022947576.1 (auxin-responsive protein SAUR23-like [Cucurbita moschata] >KAG6605026.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189 bits (480), Expect = 2.25e-60
Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAK ILKMQSGFTK+ LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL 96
          LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLH+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHV 96

[Close]

BLAST of MC02g_new0152 vs. NCBI nr
Match: XP_022944371.1 (auxin-responsive protein SAUR23-like [Cucurbita moschata])

HSP 1 Score: 188 bits (477), Expect = 6.47e-60
Identity = 90/96 (93.75%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAK ILKMQ GFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL 96
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLH+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHV 96

[Close]

BLAST of MC02g_new0152 vs. NCBI nr
Match: XP_023533294.1 (auxin-responsive protein SAUR23-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187 bits (475), Expect = 1.31e-59
Identity = 88/96 (91.67%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAK ILKMQSGFTK+ LDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL 96
          +LSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLH+
Sbjct: 61 ILSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHV 96

[Close]

BLAST of MC02g_new0152 vs. NCBI nr
Match: XP_022944365.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022986731.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986733.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986734.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986735.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >KAG6571048.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187 bits (474), Expect = 1.86e-59
Identity = 90/96 (93.75%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAK ILKMQSGFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL 96
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRL +
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of MC02g_new0152 vs. ExPASy TrEMBL
Match: A0A6J1CYH2 (auxin-responsive protein SAUR23-like OS=Momordica charantia OX=3673 GN=LOC111015444 PE=3 SV=1)

HSP 1 Score: 204 bits (519), Expect = 1.26e-66
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE 98

[Close]

BLAST of MC02g_new0152 vs. ExPASy TrEMBL
Match: A0A6J1G6U1 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111451399 PE=3 SV=1)

HSP 1 Score: 189 bits (480), Expect = 1.09e-60
Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAK ILKMQSGFTK+ LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL 96
          LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLH+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHV 96

[Close]

BLAST of MC02g_new0152 vs. ExPASy TrEMBL
Match: A0A6J1FU85 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111448836 PE=3 SV=1)

HSP 1 Score: 188 bits (477), Expect = 3.13e-60
Identity = 90/96 (93.75%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAK ILKMQ GFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL 96
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLH+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHV 96

[Close]

BLAST of MC02g_new0152 vs. ExPASy TrEMBL
Match: A0A6J1JHE3 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398 PE=3 SV=1)

HSP 1 Score: 187 bits (474), Expect = 8.98e-60
Identity = 90/96 (93.75%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAK ILKMQSGFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL 96
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRL +
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of MC02g_new0152 vs. ExPASy TrEMBL
Match: A0A6J1FVI4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448832 PE=3 SV=1)

HSP 1 Score: 187 bits (474), Expect = 8.98e-60
Identity = 90/96 (93.75%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAK ILKMQSGFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL 96
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRL +
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of MC02g_new0152 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.1 bits (292), Expect = 8.0e-27
Identity = 57/99 (57.58%), Postives = 71/99 (71.72%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILK----MQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++  +K IL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLH 96
          SFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of MC02g_new0152 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-26
Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQ 60
          M IR+  ++  +K +LK  S  + N++ +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL 95
          +LL  AEEEFGF HP GGLTIPC E  FIDL SRL
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRL 94

[Close]

BLAST of MC02g_new0152 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.8 bits (286), Expect = 4.0e-26
Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 1   MGIRLLSLVPHAKHILKMQSGFTKNHLD------VPKGHVAVYVG---EIQRKRFVVPIS 60
           MG+   ++    K ILK+ S   +N         VPKGHVAVYVG   E+++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-TSRL 95
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRL
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

[Close]

BLAST of MC02g_new0152 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 5.8e-25
Identity = 49/66 (74.24%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRLH 96
          +TSRLH
Sbjct: 85 VTSRLH 90

[Close]

BLAST of MC02g_new0152 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 12 AKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRL 95
           HP GGLTIPC ED FI++TSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

The following BLAST results are available for this feature:

BLAST of MC02g_new0152 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF6	8.1e-24	74.24	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
Q9FK62	2.4e-23	63.86	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	1.5e-22	75.00	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	1.5e-22	72.31	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJF9	2.6e-22	72.31	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of MC02g_new0152 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146161.1	2.60e-66	100.00	auxin-responsive protein SAUR23-like [Momordica charantia]	[more]
XP_022947576.1	2.25e-60	93.75	auxin-responsive protein SAUR23-like [Cucurbita moschata] >KAG6605026.1 Auxin-re...	[more]
XP_022944371.1	6.47e-60	93.75	auxin-responsive protein SAUR23-like [Cucurbita moschata]	[more]
XP_023533294.1	1.31e-59	91.67	auxin-responsive protein SAUR23-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944365.1	1.86e-59	93.75	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-...	[more]

BLAST of MC02g_new0152 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYH2	1.26e-66	100.00	auxin-responsive protein SAUR23-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1G6U1	1.09e-60	93.75	auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1FU85	3.13e-60	93.75	auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1JHE3	8.98e-60	93.75	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398...	[more]
A0A6J1FVI4	8.98e-60	93.75	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]

BLAST of MC02g_new0152 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	8.0e-27	57.58	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.1e-26	58.95	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	4.0e-26	56.73	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	5.8e-25	74.24	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.7e-24	63.86	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 e-value: 8.1E-27 score: 93.2
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..96
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g_new0152.1	MC02g_new0152.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin