MC02g1256 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g1256
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein ALP1-like protein
LocationMC02: 11629660 .. 11630140 (-)
RNA-Seq ExpressionMC02g1256
SyntenyMC02g1256
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTTTGAGGATTGTGAGGATGAAAATGATGAATTTTTATACATATTTGTATGTTTATTGTGCATTGACGTCTACAAGATGCAATCCTCTAAACAACCTAGTAGAACATATTCGCTTAAAGGTCATGATTATGTGATTGAGTTATTAAATGACAATGACACAAGATGCTTTGATTATTTTAAGATGAAAAAAGATACATTCATAGCTTTTTGTGAAGAATTAAAAGCTAAAACGGATTTGAAAGCATCTAGGTATCTTACCGTTAAAGAGCAAGTTGCCATTTTTTCGTTAATCGTATCACATAATGAAAGAAATCGTATGAGCATAAAGATTTCAACACTCAGGTCATACCATTTCTCGATCCTTCAACCATGTTTTAAAGAAAGTTTACAAGCTTGGAGTATAAATTATTTGTCCACCAAACTTAGACATTATACCACTGGAAATCATATTCAAGCCTAAATATTATCTTTTCTTTAAG

mRNA sequence

AACTTTGAGGATTGTGAGGATGAAAATGATGAATTTTTATACATATTTGTATGTTTATTGTGCATTGACGTCTACAAGATGCAATCCTCTAAACAACCTAGTAGAACATATTCGCTTAAAGGTCATGATTATGTGATTGAGTTATTAAATGACAATGACACAAGATGCTTTGATTATTTTAAGATGAAAAAAGATACATTCATAGCTTTTTGTGAAGAATTAAAAGCTAAAACGGATTTGAAAGCATCTAGGTATCTTACCGTTAAAGAGCAAGTTGCCATTTTTTCGTTAATCGTATCACATAATGAAAGAAATCGTATGAGCATAAGATTTCAACACTCAGGTCATACCATTTCTCGATCCTTCAACCATGTTTTAAAGAAAGTTTACAAGCTTGGAGTATAAATTATTTGTCCACCAAACTTAGACATTATACCACTGGAAATCATATTCAAGCCTAAATATTATCTTTTCTTTAAG

Coding sequence (CDS)

AACTTTGAGGATTGTGAGGATGAAAATGATGAATTTTTATACATATTTGTATGTTTATTGTGCATTGACGTCTACAAGATGCAATCCTCTAAACAACCTAGTAGAACATATTCGCTTAAAGGTCATGATTATGTGATTGAGTTATTAAATGACAATGACACAAGATGCTTTGATTATTTTAAGATGAAAAAAGATACATTCATAGCTTTTTGTGAAGAATTAAAAGCTAAAACGGATTTGAAAGCATCTAGGTATCTTACCGTTAAAGAGCAAGTTGCCATTTTTTCGTTAATCGTATCACATAATGAAAGAAATCGTATGAGCATAAGATTTCAACACTCAGGTCATACCATTTCTCGATCCTTCAACCATGTTTTAAAGAAAGTTTACAAGCTTGGAGTATAAATTATTTGTCCACCAAACTTAGACATTATACCACTGGAAATCATATTCAAGCCTAAATATTATCTTTTCTTTAAG

Protein sequence

NFEDCEDENDEFLYIFVCLLCIDVYKMQSSKQPSRTYSLKGHDYVIELLNDNDTRCFDYFKMKKDTFIAFCEELKAKTDLKASRYLTVKEQVAIFSLIVSHNERNRMSIRFQHSGHTISRSFNHVLKKVYKLGVUIICPPNLDIIPLEIIFKPKYYLFFK
Homology
BLAST of MC02g1256 vs. NCBI nr
Match: KAF3433792.1 (hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis])

HSP 1 Score: 191 bits (486), Expect = 2.91e-53
Identity = 95/160 (59.38%), Postives = 123/160 (76.88%), Query Frame = 0

Query: 2   FEDCEDENDEFLYIFVCLLCIDVYKMQSSKQPSRTYSLKGHDYVIELLNDNDTRCFDYFK 61
           FED  D++DE ++IF+ L+C +  ++ S +QP RT  L+GHDYV+ELLN +++RC+D F+
Sbjct: 540 FED--DDDDELIFIFLYLVCNEYAQIDSLRQPCRTSLLRGHDYVLELLNGHESRCYDCFR 599

Query: 62  MKKDTFIAFCEELKAKTDLKASRYLTVKEQVAIFSLIVSHNERNRM-SIRFQHSGHTISR 121
           M K  FI FCEELK+KT+LK SR++TV+EQVAIF L + HNERNR+ + RFQHSG TISR
Sbjct: 600 MDKSVFITFCEELKSKTNLKNSRFVTVQEQVAIFLLTICHNERNRLVAERFQHSGETISR 659

Query: 122 SFNHVLKKVYKLGVXIICPPNLDIIPLEIIFKPKYYLFFK 160
            FNHVLKKV  LGV +IC  N D++  EI F PKYY FFK
Sbjct: 660 YFNHVLKKVCMLGVELICHSNSDVVSPEIRFNPKYYPFFK 697

BLAST of MC02g1256 vs. NCBI nr
Match: XP_030504874.1 (uncharacterized protein LOC115719826 [Cannabis sativa])

HSP 1 Score: 149 bits (377), Expect = 1.32e-42
Identity = 73/156 (46.79%), Postives = 104/156 (66.67%), Query Frame = 0

Query: 6   EDENDEFLYIFVCLLCIDVYKMQSSKQPSRTYSLKGHDYVIELLNDNDTRCFDYFKMKKD 65
           +D +DEF  + V   C++  ++  +K+P R  +L GH+YV+E+L+ +++RC+D F+M KD
Sbjct: 16  DDSDDEFGELLVLFACVEYNQLYLTKEPCRNSALSGHEYVMEVLHGHESRCYDLFRMDKD 75

Query: 66  TFIAFCEELKAKTDLKASRYLTVKEQVAIFSLIVSHNERNRM-SIRFQHSGHTISRSFNH 125
            F  FC  LK K  LK SRYL+V+EQVA+F  ++ HNER+R+ + RFQHS  T S  F  
Sbjct: 76  VFKLFCGVLKEKNLLKNSRYLSVEEQVAMFLYVIGHNERHRVVAERFQHSTSTTSEYFRK 135

Query: 126 VLKKVYKLGVXIICPPNLDIIPLEIIFKPKYYLFFK 160
           VLK +  L   +I PP  D++P EI F PKYY FFK
Sbjct: 136 VLKAICHLSKELITPPLFDVVPSEIRFNPKYYPFFK 171

BLAST of MC02g1256 vs. NCBI nr
Match: KAF7123090.1 (hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii])

HSP 1 Score: 157 bits (398), Expect = 1.34e-41
Identity = 82/156 (52.56%), Postives = 103/156 (66.03%), Query Frame = 0

Query: 6   EDENDEFLYIFVCLLCIDVYKMQSSKQPSRTYSLKGHDYVIELLNDNDTRCFDYFKMKKD 65
           +D  DE + + + L   + Y M    +P RT  L+GHDYV+E+LN ++ RC   F+MK  
Sbjct: 275 DDSEDEEVVVLLSLALYEYYDMYIDHRPCRTSMLRGHDYVLEVLNGHEDRCHQNFRMKPQ 334

Query: 66  TFIAFCEELKAKTDLKASRYLTVKEQVAIFSLIVSHNERNRM-SIRFQHSGHTISRSFNH 125
            FIAFCE LK   +LK SRYLT++EQV IF L + HNERNR+   RFQHSGHTIS  F+ 
Sbjct: 335 VFIAFCEALKLHANLKHSRYLTLQEQVCIFLLTIGHNERNRVVQERFQHSGHTISIYFHR 394

Query: 126 VLKKVYKLGVXIICPPNLDIIPLEIIFKPKYYLFFK 160
           VLK V KLGV II PP+ D IP +I    KY+ FFK
Sbjct: 395 VLKAVCKLGVVIIQPPSFDSIPHQIRRNAKYFPFFK 430

BLAST of MC02g1256 vs. NCBI nr
Match: KAF7148819.1 (hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii])

HSP 1 Score: 158 bits (399), Expect = 2.71e-41
Identity = 82/156 (52.56%), Postives = 103/156 (66.03%), Query Frame = 0

Query: 6   EDENDEFLYIFVCLLCIDVYKMQSSKQPSRTYSLKGHDYVIELLNDNDTRCFDYFKMKKD 65
           +D  DE + + + L   + Y M    +P RT  L+GHDYV+E+LN ++ RC   F+MK  
Sbjct: 628 DDSEDEEVVVLLSLALYEYYNMYIDHRPCRTSILRGHDYVVEVLNGHEDRCHQNFRMKPQ 687

Query: 66  TFIAFCEELKAKTDLKASRYLTVKEQVAIFSLIVSHNERNRM-SIRFQHSGHTISRSFNH 125
            FIAFCE LK   +LK SRYLT++EQV IF L + HNERNR+   RFQHSGHTIS  F+ 
Sbjct: 688 VFIAFCEALKLHANLKHSRYLTLQEQVCIFLLTIGHNERNRVVQERFQHSGHTISIYFHR 747

Query: 126 VLKKVYKLGVXIICPPNLDIIPLEIIFKPKYYLFFK 160
           VLK V KLGV II PP+ D IP +I    KY+ FFK
Sbjct: 748 VLKAVCKLGVVIIQPPSFDSIPHQIRRNAKYFPFFK 783

BLAST of MC02g1256 vs. NCBI nr
Match: XP_030486358.1 (protein ALP1-like isoform X1 [Cannabis sativa])

HSP 1 Score: 152 bits (384), Expect = 4.02e-41
Identity = 74/156 (47.44%), Postives = 105/156 (67.31%), Query Frame = 0

Query: 6   EDENDEFLYIFVCLLCIDVYKMQSSKQPSRTYSLKGHDYVIELLNDNDTRCFDYFKMKKD 65
           +D +DEF  + +   C++  ++  +K+P R  +L GH+YV+E+L+ +D+RC+D F+M KD
Sbjct: 16  DDSDDEFGELLILFACVEYNQLYLTKEPCRNSALSGHEYVMEVLHGHDSRCYDLFRMDKD 75

Query: 66  TFIAFCEELKAKTDLKASRYLTVKEQVAIFSLIVSHNERNRM-SIRFQHSGHTISRSFNH 125
            F  FC  LK K  LK SRYL+V+EQVA+F  ++ HNER+R+ + RFQHS  T S  F  
Sbjct: 76  VFKLFCGVLKEKKLLKNSRYLSVEEQVAMFLFVIGHNERHRVVAERFQHSTSTTSEYFRK 135

Query: 126 VLKKVYKLGVXIICPPNLDIIPLEIIFKPKYYLFFK 160
           VLK V +L   +I PP  D++P EI F PKYY FFK
Sbjct: 136 VLKAVCRLSKELITPPLFDVVPSEIRFNPKYYPFFK 171

BLAST of MC02g1256 vs. ExPASy TrEMBL
Match: A0A0A0LCZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G398940 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 1.48e-36
Identity = 72/140 (51.43%), Postives = 89/140 (63.57%), Query Frame = 0

Query: 41  GHDYVIELLNDNDTRCFDYFKMKKDTFIAFCEELKAKTDLK------------------- 100
           GHDYVIELLN ND+RCFD F+ ++ TF+ FCE+LK+KT+LK                   
Sbjct: 18  GHDYVIELLNGNDSRCFDCFRRRRVTFVRFCEDLKSKTNLKKASRYLTVQEKVAIFLLIK 77

Query: 101 ------------------ASRYLTVKEQVAIFSLIVSHNERNRMSI-RFQHSGHTISRSF 142
                             ASRYLTV+E+VAIF LI+SHNE NR+ + RFQHSGHTIS +F
Sbjct: 78  ASRYLTVQEKVAIFLLIKASRYLTVQEKVAIFLLIISHNESNRIVVERFQHSGHTISLAF 137

BLAST of MC02g1256 vs. ExPASy TrEMBL
Match: A0A2P5ATJ1 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_341650 PE=4 SV=1)

HSP 1 Score: 110 bits (275), Expect = 1.26e-27
Identity = 62/141 (43.97%), Postives = 84/141 (59.57%), Query Frame = 0

Query: 7   DENDEFLYIFVCLLCIDVYKMQSSKQPSRTYSLKGHDYVIELLNDNDTRCFDYFKMKKDT 66
           D++D  L   + L  +  Y     K+  R   L G++YV+E+LN    RCFD F+M+K+ 
Sbjct: 17  DDSDNDLAEVLMLYSLGSY---IPKELCRDSILSGYEYVVEVLNSYRNRCFDSFRMEKNV 76

Query: 67  FIAFCEELKAKTDLKASRYLTVKEQVAIFSLIVSHNERNRMSI-RFQHSGHTISRSFNHV 126
           F A C  LK K  LK S+Y+ V+EQVAIF  I+S NER++M+  RFQHS   ISR F  +
Sbjct: 77  FKALCSVLKEKKFLKDSKYILVEEQVAIFLYIISQNERHQMAAKRFQHSSEIISRHFRKM 136

Query: 127 LKKVYKLGVXIICPPNLDIIP 146
           LK + +LG  I  PP  D  P
Sbjct: 137 LKAICRLGKEITAPPYFDTTP 154

BLAST of MC02g1256 vs. ExPASy TrEMBL
Match: A0A3Q7Y331 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852522 PE=3 SV=1)

HSP 1 Score: 114 bits (286), Expect = 3.43e-27
Identity = 63/156 (40.38%), Postives = 96/156 (61.54%), Query Frame = 0

Query: 6   EDENDEFLYIFVCLLCIDVYKMQSSKQPSRTYSLKGHDYVIELLNDNDTRCFDYFKMKKD 65
           ++ +D+F+   +  +  D +    +K    T SL G ++V E+LN ++T CFD F+MKK+
Sbjct: 30  DESDDDFVEFLISNVIYDYHHKFFNKGKVLTSSLSGREFVAEVLNGSETSCFDLFRMKKE 89

Query: 66  TFIAFCEELKAKTDLKASRYLTVKEQVAIFSLIVSHNERNRM-SIRFQHSGHTISRSFNH 125
            F+ FC EL+ K  L  SR + V+E+VA F  I+ HN R+R+ S RFQHS  TISR+F  
Sbjct: 90  CFLNFCNELRGKNYLSDSRDVLVEEKVATFLFIIGHNVRHRVASNRFQHSTETISRNFKE 149

Query: 126 VLKKVYKLGVXIICPPNLDIIPLEIIFKPKYYLFFK 160
           VL+ V +LG  +I   ++++ P  I    KYY +FK
Sbjct: 150 VLRAVCRLGKELIKQESIEL-PERIKNNSKYYPWFK 184

BLAST of MC02g1256 vs. ExPASy TrEMBL
Match: A0A1S3E695 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852030 PE=3 SV=1)

HSP 1 Score: 114 bits (286), Expect = 4.26e-27
Identity = 63/156 (40.38%), Postives = 96/156 (61.54%), Query Frame = 0

Query: 6   EDENDEFLYIFVCLLCIDVYKMQSSKQPSRTYSLKGHDYVIELLNDNDTRCFDYFKMKKD 65
           ++ +D+F+   +  +  D +    +K    T SL G ++V E+LN ++T CFD F+MKK+
Sbjct: 20  DESDDDFVEFLISNVIYDYHHKFFNKGKVLTSSLSGREFVAEVLNGSETSCFDLFRMKKE 79

Query: 66  TFIAFCEELKAKTDLKASRYLTVKEQVAIFSLIVSHNERNRM-SIRFQHSGHTISRSFNH 125
            F+ FC EL+ K  L  SR + V+E+VA F  I+ HN R+R+ S RFQHS  TISR+F  
Sbjct: 80  CFLNFCNELRGKNYLSDSRDVLVEEKVATFLFIIGHNVRHRVASNRFQHSTETISRNFKE 139

Query: 126 VLKKVYKLGVXIICPPNLDIIPLEIIFKPKYYLFFK 160
           VL+ V +LG  +I   ++++ P  I    KYY +FK
Sbjct: 140 VLRAVCRLGKELIKQESIEL-PERIKNNSKYYPWFK 174

BLAST of MC02g1256 vs. ExPASy TrEMBL
Match: A0A443P2U0 (Protein ALP1-like protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01388400 PE=4 SV=1)

HSP 1 Score: 110 bits (275), Expect = 1.07e-26
Identity = 60/156 (38.46%), Postives = 89/156 (57.05%), Query Frame = 0

Query: 6   EDENDEFLYIFVCLLCIDVYKMQSSKQPSRTYSLKGHDYVIELLNDNDTRCFDYFKMKKD 65
           E   DE  +     L I  Y+++ ++   R     G+++V ++L  +  RC+D F+M+K 
Sbjct: 7   ETNRDEEAFTAFIFLMIGQYQLRIARHAIRDKGEPGYEFVNKVLCGHPKRCYDLFRMEKH 66

Query: 66  TFIAFCEELKAKTDLKASRYLTVKEQVAIFSLIVSHNERNRMSI-RFQHSGHTISRSFNH 125
            F   C  LK++  L  S++L+V+EQVAIF + + H+ RNRM   RFQHSG TIS  F  
Sbjct: 67  MFHGLCNTLKSRNLLHDSKFLSVEEQVAIFLMTIGHSMRNRMMADRFQHSGETISCHFKR 126

Query: 126 VLKKVYKLGVXIICPPNLDIIPLEIIFKPKYYLFFK 160
           VLK +  LG  +I PP+    P EI+   KYY +F 
Sbjct: 127 VLKAIVNLGKELITPPSFTDTPPEILNNSKYYPWFN 162

BLAST of MC02g1256 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11
Identity = 37/110 (33.64%), Postives = 61/110 (55.45%), Query Frame = 0

Query: 31  KQPSRTYSLKGHDYVIELLNDNDTRCFDYFKMKKDTFIAFCEELKAKTDLKASRYLTVKE 90
           K+ S+     G+ +V ++LN  + +CF+ F+M K  F   C+ L+ +  L+ +  + ++ 
Sbjct: 17  KEVSKISISDGNKFVYQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEA 76

Query: 91  QVAIFSLIVSHNERNR-MSIRFQHSGHTISRSFNHVLKKVYKLGVXIICP 140
           Q+AIF  I+ HN R R +   F +SG TISR FN+VL  V  +      P
Sbjct: 77  QLAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFFQP 126

BLAST of MC02g1256 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 8.3e-05
Identity = 32/115 (27.83%), Postives = 50/115 (43.48%), Query Frame = 0

Query: 49  LNDNDTRCFDYFKMKKDTFIAFCEELKAKTDLKASRYLTVKEQVAIFSLIVSHNERNR-M 108
           L  +   C    +M    F   C  L+   DL+ +  ++++E VA+F  I  HNE  R +
Sbjct: 59  LQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDV 118

Query: 109 SIRFQHSGHTISRSFNHVLKKVYKLGVXIICPP---NLDIIPLEIIFKPKYYLFF 160
            +RF  +  T+ R F  VL     L    I  P    L  IP  +    +Y+ +F
Sbjct: 119 GLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYF 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAF3433792.12.91e-5359.38hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis][more]
XP_030504874.11.32e-4246.79uncharacterized protein LOC115719826 [Cannabis sativa][more]
KAF7123090.11.34e-4152.56hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii][more]
KAF7148819.12.71e-4152.56hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii][more]
XP_030486358.14.02e-4147.44protein ALP1-like isoform X1 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
A0A0A0LCZ71.48e-3651.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G398940 PE=4 SV=1[more]
A0A2P5ATJ11.26e-2743.97Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_341650 PE=4 SV... [more]
A0A3Q7Y3313.43e-2740.38protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=... [more]
A0A1S3E6954.26e-2740.38protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=... [more]
A0A443P2U01.07e-2638.46Protein ALP1-like protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKA... [more]
Match NameE-valueIdentityDescription
AT5G41980.11.2e-1133.64CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT1G43722.18.3e-0527.83unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 25..133
NoneNo IPR availablePANTHERPTHR22930:SF218DUAL SPECIFICITY PHOSPHATASE DOMAIN PROTEINcoord: 25..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g1256.1MC02g1256.1mRNA