MC02g0954 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g0954
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionorgan-specific protein P4
LocationMC02: 7631484 .. 7631666 (-)
RNA-Seq ExpressionMC02g0954
SyntenyMC02g0954
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAAGGATCAAGGGGAGTATTGGAAGAAAATAATGAAAGAGGAAGAAATTCCAGAGGTTCTAAAGGAGCTGTTATATGATGATTCAGTGGGCGGCCAAAACGAGCGTTTTATGAGCAATTTTGACCCTCATCCCAACGCTATAATATACCACTCCCACTCCCATGGCGCCGCCGCCGGCCAT

mRNA sequence

AGGAAGGATCAAGGGGAGTATTGGAAGAAAATAATGAAAGAGGAAGAAATTCCAGAGGTTCTAAAGGAGCTGTTATATGATGATTCAGTGGGCGGCCAAAACGAGCGTTTTATGAGCAATTTTGACCCTCATCCCAACGCTATAATATACCACTCCCACTCCCATGGCGCCGCCGCCGGCCAT

Coding sequence (CDS)

AGGAAGGATCAAGGGGAGTATTGGAAGAAAATAATGAAAGAGGAAGAAATTCCAGAGGTTCTAAAGGAGCTGTTATATGATGATTCAGTGGGCGGCCAAAACGAGCGTTTTATGAGCAATTTTGACCCTCATCCCAACGCTATAATATACCACTCCCACTCCCATGGCGCCGCCGCCGGCCAT

Protein sequence

RKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFMSNFDPHPNAIIYHSHSHGAAAGH
Homology
BLAST of MC02g0954 vs. NCBI nr
Match: XP_022148637.1 (organ-specific protein P4 [Momordica charantia])

HSP 1 Score: 129 bits (325), Expect = 2.31e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0

Query: 1  RKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFMSNFDPHPNAIIYHSHSHGAAAG 60
          RKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFMSNFDPHPNAIIYHSHSHGAAAG
Sbjct: 23 RKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFMSNFDPHPNAIIYHSHSHGAAAG 82

BLAST of MC02g0954 vs. NCBI nr
Match: XP_022986644.1 (organ-specific protein S2-like [Cucurbita maxima])

HSP 1 Score: 98.6 bits (244), Expect = 6.26e-25
Identity = 46/62 (74.19%), Postives = 54/62 (87.10%), Query Frame = 0

Query: 1  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNERFMSNFDPHPNAIIYHSHSHGAAA 60
          RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +RFM+NFDPHPNAIIYH+H+H  A 
Sbjct: 24 RKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQRFMNNFDPHPNAIIYHAHAHAHAH 83

BLAST of MC02g0954 vs. NCBI nr
Match: KAG6571127.1 (hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010938.1 hypothetical protein SDJN02_27736, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 94.7 bits (234), Expect = 1.97e-23
Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 1  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNERFMSNFDPHPNAIIYHSHSHGAAA 60
          RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +RFM+NFDPHPNAIIYH+H+H    
Sbjct: 24 RKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQRFMNNFDPHPNAIIYHAHAHAHGH 83

BLAST of MC02g0954 vs. NCBI nr
Match: XP_022944721.1 (organ-specific protein P4-like [Cucurbita moschata])

HSP 1 Score: 94.7 bits (234), Expect = 1.97e-23
Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 1  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNERFMSNFDPHPNAIIYHSHSHGAAA 60
          RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +RFM+NFDPHPNAIIYH+H+H    
Sbjct: 24 RKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQRFMNNFDPHPNAIIYHAHAHAHGH 83

BLAST of MC02g0954 vs. NCBI nr
Match: XP_023513271.1 (organ-specific protein S2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 94.7 bits (234), Expect = 1.97e-23
Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 1  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNERFMSNFDPHPNAIIYHSHSHGAAA 60
          RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +RFM+NFDPHPNAIIYH+H+H    
Sbjct: 24 RKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQRFMNNFDPHPNAIIYHAHAHAHGH 83

BLAST of MC02g0954 vs. ExPASy TrEMBL
Match: A0A6J1D5L4 (organ-specific protein P4 OS=Momordica charantia OX=3673 GN=LOC111017249 PE=4 SV=1)

HSP 1 Score: 129 bits (325), Expect = 1.12e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0

Query: 1  RKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFMSNFDPHPNAIIYHSHSHGAAAG 60
          RKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFMSNFDPHPNAIIYHSHSHGAAAG
Sbjct: 23 RKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFMSNFDPHPNAIIYHSHSHGAAAG 82

BLAST of MC02g0954 vs. ExPASy TrEMBL
Match: A0A6J1JGL9 (organ-specific protein S2-like OS=Cucurbita maxima OX=3661 GN=LOC111484322 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.03e-25
Identity = 46/62 (74.19%), Postives = 54/62 (87.10%), Query Frame = 0

Query: 1  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNERFMSNFDPHPNAIIYHSHSHGAAA 60
          RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +RFM+NFDPHPNAIIYH+H+H  A 
Sbjct: 24 RKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQRFMNNFDPHPNAIIYHAHAHAHAH 83

BLAST of MC02g0954 vs. ExPASy TrEMBL
Match: A0A6J1FYV4 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111449094 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.54e-24
Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 1  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNERFMSNFDPHPNAIIYHSHSHGAAA 60
          RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +RFM+NFDPHPNAIIYH+H+H    
Sbjct: 24 RKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQRFMNNFDPHPNAIIYHAHAHAHGH 83

BLAST of MC02g0954 vs. ExPASy TrEMBL
Match: A0A6J1L3N5 (organ-specific protein P4-like OS=Cucurbita maxima OX=3661 GN=LOC111499606 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.50e-20
Identity = 40/57 (70.18%), Postives = 48/57 (84.21%), Query Frame = 0

Query: 1  RKDQGEYWKKIMKEEEIPEVLKELLYDD----SVGGQNERFMSNFDPHPNAIIYHSH 53
          RK++GEYWKK+MK+E IPE+LKELL+DD    S   Q+ERFM+NFD HPNAIIYHSH
Sbjct: 22 RKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSERFMNNFDTHPNAIIYHSH 78

BLAST of MC02g0954 vs. ExPASy TrEMBL
Match: A0A6J1G7K5 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111451468 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.60e-19
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 0

Query: 1  RKDQGEYWKKIMKEEEIPEVLKELLYDD----SVGGQNERFMSNFDPHPNAIIYHSH 53
          RK++GEYWKK+MK+E IPE+LKELL+DD    S   Q+E FM+NFD HPNAIIYHSH
Sbjct: 22 RKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSH 78

BLAST of MC02g0954 vs. TAIR 10
Match: AT1G49310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; Has 11 Blast hits to 11 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 2.2e-06
Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 0

Query: 6  EYWKKIMKEEEIPEVLKELLYDDSVGGQNERFMSNFDPHPNAIIYHS 53
          EYWKK+MK E +PE +KELL +     Q ERF+ NFD     IIYH+
Sbjct: 34 EYWKKMMKNEPLPEPIKELLNNPFRTAQ-ERFIQNFDTKSVVIIYHN 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022148637.12.31e-37100.00organ-specific protein P4 [Momordica charantia][more]
XP_022986644.16.26e-2574.19organ-specific protein S2-like [Cucurbita maxima][more]
KAG6571127.11.97e-2372.13hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022944721.11.97e-2372.13organ-specific protein P4-like [Cucurbita moschata][more]
XP_023513271.11.97e-2372.13organ-specific protein S2-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A6J1D5L41.12e-37100.00organ-specific protein P4 OS=Momordica charantia OX=3673 GN=LOC111017249 PE=4 SV... [more]
A0A6J1JGL93.03e-2574.19organ-specific protein S2-like OS=Cucurbita maxima OX=3661 GN=LOC111484322 PE=4 ... [more]
A0A6J1FYV49.54e-2472.13organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111449094 PE=... [more]
A0A6J1L3N54.50e-2070.18organ-specific protein P4-like OS=Cucurbita maxima OX=3661 GN=LOC111499606 PE=4 ... [more]
A0A6J1G7K52.60e-1968.42organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111451468 PE=... [more]
Match NameE-valueIdentityDescription
AT1G49310.12.2e-0653.19unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024489Organ specific proteinPFAMPF10950Organ_specificcoord: 2..27
e-value: 1.7E-6
score: 28.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g0954.1MC02g0954.1mRNA