MC02g0579 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g0579
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSmall ubiquitin-related modifier
LocationMC02: 4656933 .. 4658749 (-)
RNA-Seq ExpressionMC02g0579
SyntenyMC02g0579
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATGACTTTTAGAGTAATTTACATCTACACTATCTTTAAAAAAAGATGGAATTTTCCTTATTTTTATATATTGCAAAATGCAACTGTCCGCTTCACTATTTTGGGCTGGCCCAACAAAAGTCTGGTAGTGAGATCCACAGTTCAAGCTAAGGCCCAATAGTCACAGCCCACCAGCCCACTTCCACGAAGGCGACTGAGCTCTCTTCAGTCTTCACGAGGCGGAAGTCAGAAGATTTAAACCCTAATTTCTGCTACAATCGGCCAAGATTAAGAATGTCGGGCGTCACAAACACACCGAATGCACAGCAAGAGGAAGACAAGAAGCCCAACGACCAATCGGCGCATATCAACCTTAAGGTCAAAGGCCAGGTTGGTTTCCTGTGGGATTATATTTCGTCTGATACTTTTTTGGTGGTTCTTGATGAATAAAGCTTGGGTTTGAGGGTTTCAATTTGATATTTCTTTGATGTGTTTTGGGTTTCTTGGCATTAAATTGCCTTGCCTTCTCTTTTCGATTTCTTTAGGCTATATCGGCTAGGTAACAGGAACTAAAGTATCAATTATAGACTTGTAAGGTGTTGTTGATCGTGATCCCTATAATTCACTCTATGTTCTATATTTGGGCAACACTTTTGGTCATTCGCAAAAATTGAAGCCGGAAAATGAAATGAACATTGTAAGTGGCAGGTGCGGTAGTTATCTTTCGTTATTTGAATTCTCCCCCTCCCAGAATCTAGCAAAGCCAATTCAGTTTCTAAATAGTGCTGCTCTGTGGTCTTCGTTGATTATTGTTACAGATGATGGTGGGTTAACTTGAGGGTGTGTTTAATCTGATAAATTTTTTCATTCTTAAGCAGTGTGCTAGGAGATTGAAGTGTTTATGAATCCTTGGCCCCATTCTTACTGCTCTAGTTTTCCTGTCATGGAGTGATTGATCCAAGCCTTTTTCTTGCCTCTTGGCAAATTTCCAGAGATTGAATCGACTCAAATTGTCTTTTTCCTGTTGTCTGTCCTGTTTGTCTTCCCGTGACATATGTCTCAGTTCCCTGTATCTGTTCTATCTCATTTTATCTGTTACCATTTCCTTTCTCCATCATTCTCCTTTATCAAGTACTTTATGAAATGCTCCGTACACTTTTATTCCTTCTCTATTTTTGGTTATCAATTACAGCAATTAGTTCAAATAAATTTTGGTTAGAAATAGTCTTAGGATCGCAAAACTTTCTTGATTTCGACGAGTCTGTATTTACGAAAGAAGAAAGATAGATAACCTCATTAGTTATCATTCTTTGAGTTTCTTTAGGATGGGAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTTGATGGTCGTCGTCTTCGTGGAGAGCAGACTCCCGATGAGGTAGCCTTTTATCTGATCTAAGCTCAGATAGGTATTCTAGATTAAATTCATGTAATTCTAATAAAACCATGTGTCGTATCAGCTAGAGATGGAGGATGGTGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCTACTCATTGAATACGTGCTGCTGGCTCTGTTCCTTTACGAACTAGTATTTTCATTGTACTTGCTTGCAGGCTTATTAGTAGGCTTTGTAGATTCGAATGTTCTCATAATAGTCTCCTTTCTAAAATGTCAAAACTAGCTTTAACTGGTTAAAGGGCTTTAGTGTTTGGTCAGTAATCTCTTCTCACATCAAATATTTCTTGGCTTGCTGTACGGATTGGAAGCCT

mRNA sequence

CAATGACTTTTAGAGTAATTTACATCTACACTATCTTTAAAAAAAGATGGAATTTTCCTTATTTTTATATATTGCAAAATGCAACTGTCCGCTTCACTATTTTGGGCTGGCCCAACAAAAGTCTGGTAGTGAGATCCACAGTTCAAGCTAAGGCCCAATAGTCACAGCCCACCAGCCCACTTCCACGAAGGCGACTGAGCTCTCTTCAGTCTTCACGAGGCGGAAGTCAGAAGATTTAAACCCTAATTTCTGCTACAATCGGCCAAGATTAAGAATGTCGGGCGTCACAAACACACCGAATGCACAGCAAGAGGAAGACAAGAAGCCCAACGACCAATCGGCGCATATCAACCTTAAGGTCAAAGGCCAGGATGGGAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTTGATGGTCGTCGTCTTCGTGGAGAGCAGACTCCCGATGAGCTAGAGATGGAGGATGGTGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCTACTCATTGAATACGTGCTGCTGGCTCTGTTCCTTTACGAACTAGTATTTTCATTGTACTTGCTTGCAGGCTTATTAGTAGGCTTTGTAGATTCGAATGTTCTCATAATAGTCTCCTTTCTAAAATGTCAAAACTAGCTTTAACTGGTTAAAGGGCTTTAGTGTTTGGTCAGTAATCTCTTCTCACATCAAATATTTCTTGGCTTGCTGTACGGATTGGAAGCCT

Coding sequence (CDS)

ATGTCGGGCGTCACAAACACACCGAATGCACAGCAAGAGGAAGACAAGAAGCCCAACGACCAATCGGCGCATATCAACCTTAAGGTCAAAGGCCAGGATGGGAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTTGATGGTCGTCGTCTTCGTGGAGAGCAGACTCCCGATGAGCTAGAGATGGAGGATGGTGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCTACTCATTGA

Protein sequence

MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH
Homology
[Close]
BLAST of MC02g0579 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-42
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 9   NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 68
           +A QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2   SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 69  FDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGS 102
           FDGRRLR EQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 62  FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]
BLAST of MC02g0579 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.9e-41
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0 

Query: 9   NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 68
           +A  EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFL
Sbjct: 2   SATPEEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFL 61

Query: 69  FDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
           FDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 62  FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]
BLAST of MC02g0579 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-39
Identity = 83/95 (87.37%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 9   NAQQEEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 68
           +A  EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+I
Sbjct: 2   SAAGEEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAI 61

Query: 69  AFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
           AFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 62  AFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]
BLAST of MC02g0579 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 5.9e-25
Identity = 56/102 (54.90%), Postives = 73/102 (71.57%), Query Frame = 0 

Query: 2   SGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD 61
           S +T T     ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   
Sbjct: 15  SAITPTTGDTSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKS 74

Query: 62  LNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH 104
           +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG TH
Sbjct: 75  MNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGGCTH 114

[Close]
BLAST of MC02g0579 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0 

Query: 14  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 73
           +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5   QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 74  RRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
            R+ G +TPDEL+MEDGD IDA    +GG
Sbjct: 65  ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]
BLAST of MC02g0579 vs. NCBI nr
Match: XP_022149763.1 (small ubiquitin-related modifier 1-like [Momordica charantia])

HSP 1 Score: 206 bits (523), Expect = 9.21e-67
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH 103
           DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH
Sbjct: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH 103

[Close]
BLAST of MC02g0579 vs. NCBI nr
Match: XP_004150752.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiquitin-related modifier 1-like [Benincasa hispida] >KGN46994.1 hypothetical protein Csa_020805 [Cucumis sativus])

HSP 1 Score: 189 bits (479), Expect = 4.33e-60
Identity = 98/102 (96.08%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]
BLAST of MC02g0579 vs. NCBI nr
Match: XP_022986050.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima])

HSP 1 Score: 188 bits (478), Expect = 6.15e-60
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNTP   QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNTP---QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of MC02g0579 vs. NCBI nr
Match: XP_008456407.1 (PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa] >TYK14581.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (475), Expect = 1.76e-59
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of MC02g0579 vs. NCBI nr
Match: XP_022943304.1 (small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022986048.1 small ubiquitin-related modifier 1 [Cucurbita maxima] >XP_023512038.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >XP_023513384.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >KAG6570547.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010405.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7010406.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187 bits (475), Expect = 1.76e-59
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of MC02g0579 vs. ExPASy TrEMBL
Match: A0A6J1D7M3 (Small ubiquitin-related modifier OS=Momordica charantia OX=3673 GN=LOC111018116 PE=3 SV=1)

HSP 1 Score: 206 bits (523), Expect = 4.46e-67
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH 103
           DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH
Sbjct: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH 103

[Close]
BLAST of MC02g0579 vs. ExPASy TrEMBL
Match: A0A0A0KDV8 (Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3 SV=1)

HSP 1 Score: 189 bits (479), Expect = 2.09e-60
Identity = 98/102 (96.08%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]
BLAST of MC02g0579 vs. ExPASy TrEMBL
Match: A0A6J1JCZ0 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483905 PE=3 SV=1)

HSP 1 Score: 188 bits (478), Expect = 2.98e-60
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNTP   QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNTP---QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of MC02g0579 vs. ExPASy TrEMBL
Match: A0A6J1FTW7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 PE=3 SV=1)

HSP 1 Score: 187 bits (475), Expect = 8.54e-60
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of MC02g0579 vs. ExPASy TrEMBL
Match: A0A5A7UHK7 (Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00760 PE=3 SV=1)

HSP 1 Score: 187 bits (475), Expect = 8.54e-60
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60
           MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV
Sbjct: 1   MSGVTNT---QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  DLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGST 102
           DLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  DLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of MC02g0579 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 173.3 bits (438), Expect = 9.9e-44
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 9   NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 68
           +A QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2   SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 69  FDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGS 102
           FDGRRLR EQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 62  FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]
BLAST of MC02g0579 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 167.9 bits (424), Expect = 4.2e-42
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0 

Query: 9   NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 68
           +A  EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFL
Sbjct: 2   SATPEEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFL 61

Query: 69  FDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
           FDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 62  FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]
BLAST of MC02g0579 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 158.7 bits (400), Expect = 2.5e-39
Identity = 85/105 (80.95%), Postives = 86/105 (81.90%), Query Frame = 0 

Query: 9   NAQQEEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYC 68
           +A  EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYC
Sbjct: 2   SATPEEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYC 61

Query: 69  DRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
           DRQSVD NSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 62  DRQSVDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 105

[Close]
BLAST of MC02g0579 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0 

Query: 14  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 73
           +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5   QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 74  RRLRGEQTPDELEMEDGDEIDAMLHQTGG 101
            R+ G +TPDEL+MEDGD IDA    +GG
Sbjct: 65  ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]
BLAST of MC02g0579 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.3e-19
Identity = 45/86 (52.33%), Postives = 63/86 (73.26%), Query Frame = 0 

Query: 15  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 74
           DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R+
Sbjct: 5   DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64

Query: 75  RGEQTPDELEMEDGDEIDAMLHQTGG 101
           +  QTP+EL +ED DEI+A   Q GG
Sbjct: 65  KLNQTPNELGLEDEDEIEAFGEQLGG 90

The following BLAST results are available for this feature:
BLAST of MC02g0579 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P558521.4e-4291.40Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1... [more]
Q9FLP65.9e-4192.39Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1... [more]
P558571.9e-3987.37Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S... [more]
O133515.9e-2554.90Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
Q9FLP51.5e-2056.18Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1... [more]
BLAST of MC02g0579 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022149763.19.21e-67100.00small ubiquitin-related modifier 1-like [Momordica charantia][more]
XP_004150752.14.33e-6096.08small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiqu... [more]
XP_022986050.16.15e-6095.10small ubiquitin-related modifier 1-like [Cucurbita maxima][more]
XP_008456407.11.76e-5995.10PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small... [more]
XP_022943304.11.76e-5995.10small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ub... [more]
BLAST of MC02g0579 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D7M34.46e-67100.00Small ubiquitin-related modifier OS=Momordica charantia OX=3673 GN=LOC111018116 ... [more]
A0A0A0KDV82.09e-6096.08Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3... [more]
A0A6J1JCZ02.98e-6095.10Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483905 PE=... [more]
A0A6J1FTW78.54e-6095.10Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 P... [more]
A0A5A7UHK78.54e-6095.10Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
BLAST of MC02g0579 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G26840.19.9e-4491.40small ubiquitin-like modifier 1 [more]
AT5G55160.14.2e-4292.39small ubiquitin-like modifier 2 [more]
AT5G55160.22.5e-3980.95small ubiquitin-like modifier 2 [more]
AT5G55170.11.1e-2156.18small ubiquitin-like modifier 3 [more]
AT5G55856.11.3e-1952.33Ubiquitin-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 25..96
e-value: 5.1E-14
score: 62.6
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 23..100
score: 15.94969
NoneNo IPR availableGENE3D3.10.20.90coord: 2..100
e-value: 2.2E-41
score: 142.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR10562SMALL UBIQUITIN-RELATED MODIFIERcoord: 9..101
NoneNo IPR availablePANTHERPTHR10562:SF87SMALL UBIQUITIN-RELATED MODIFIERcoord: 9..101
NoneNo IPR availableCDDcd16116Ubl_Smt3_likecoord: 23..96
e-value: 1.09253E-48
score: 147.375
IPR022617Rad60/SUMO-like domainPFAMPF11976Rad60-SLDcoord: 25..95
e-value: 7.1E-25
score: 86.6
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 10..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g0579.1MC02g0579.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016925 protein sumoylation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0031386 protein tag
molecular_function GO:0044389 ubiquitin-like protein ligase binding
molecular_function GO:0005515 protein binding