MC02g0181 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5CDSpolypeptideutr3 Hold the cursor over a type above to highlight its positions in the sequence below.ATCCGTTTTAATCCCCACCCTTCACAAGTTTCAGTTGCACATATCACAGAGACTGAGAGCAGACGCTGAGTAAGGCTTCTCACTTTAATTATGTACTACTACTACTACTACTACTACTTATTTTCTTTTGTGTGTTTTAACTATATATAATATTCTCACATGATTTTATATTGAAGGAGGGAAATGAGCAAGAGATCCAGAAGCCCAGAGGCAGAGGTGGGGATGAACCTGAGCTTGAACCTGAACCTGAACCGGTCTCCGGCGTGGTCGTCCACGGAGGAGGAGTCGCTGAGCAGTGCCGTTGTGGGGCTGTCGTCGTCGTTGTCATCTTCGTCCTCATTGTCGGATATGTCGTGTGAGGGAGATCAGGAGCAGGTGAGATATTGTTCGGATAATGAGACGATAACGAGGTCGATGGCGCTGGTGGGTTGCCCCGGATGCTTCATGTATGTGATGTTGACGGACAAGAGCTCCCAATGCCCAAAATGCAAGAACAATGTGTTCCTTGATTTCTTCCAGCACCACCGTCAACATAATTACAAGAACTAGAGGATCATGTATTTTGATTCTCATCTTTCTTTCTTAATTTAATAATTTAAGCTAGCTAGGTAGGGTCCCGACTAATAATTTAATTTTCTGTATTTTATTTTGGTCCGATGTCGTATTTGTGCTGTGGGTGATATTGTCATCGGCCATGAAAGTAGGGTTTAGCAGACCTTTTCTATCAATAATTGACTACTCACCCTCTCTTGTAAGTCTCTTCTACTTCATCTTATTCTTTGCCCTTACTTTTCACTATCATGCGGTTGTATGTCTGGAT ATCCGTTTTAATCCCCACCCTTCACAAGTTTCAGTTGCACATATCACAGAGACTGAGAGCAGACGCTGAGAGGGAAATGAGCAAGAGATCCAGAAGCCCAGAGGCAGAGGTGGGGATGAACCTGAGCTTGAACCTGAACCTGAACCGGTCTCCGGCGTGGTCGTCCACGGAGGAGGAGTCGCTGAGCAGTGCCGTTGTGGGGCTGTCGTCGTCGTTGTCATCTTCGTCCTCATTGTCGGATATGTCGTGTGAGGGAGATCAGGAGCAGGTGAGATATTGTTCGGATAATGAGACGATAACGAGGTCGATGGCGCTGGTGGGTTGCCCCGGATGCTTCATGTATGTGATGTTGACGGACAAGAGCTCCCAATGCCCAAAATGCAAGAACAATGTGTTCCTTGATTTCTTCCAGCACCACCGTCAACATAATTACAAGAACTAGAGGATCATGTATTTTGATTCTCATCTTTCTTTCTTAATTTAATAATTTAAGCTAGCTAGGTAGGGTCCCGACTAATAATTTAATTTTCTGTATTTTATTTTGGTCCGATGTCGTATTTGTGCTGTGGGTGATATTGTCATCGGCCATGAAAGTAGGGTTTAGCAGACCTTTTCTATCAATAATTGACTACTCACCCTCTCTTGTAAGTCTCTTCTACTTCATCTTATTCTTTGCCCTTACTTTTCACTATCATGCGGTTGTATGTCTGGAT ATGAGCAAGAGATCCAGAAGCCCAGAGGCAGAGGTGGGGATGAACCTGAGCTTGAACCTGAACCTGAACCGGTCTCCGGCGTGGTCGTCCACGGAGGAGGAGTCGCTGAGCAGTGCCGTTGTGGGGCTGTCGTCGTCGTTGTCATCTTCGTCCTCATTGTCGGATATGTCGTGTGAGGGAGATCAGGAGCAGGTGAGATATTGTTCGGATAATGAGACGATAACGAGGTCGATGGCGCTGGTGGGTTGCCCCGGATGCTTCATGTATGTGATGTTGACGGACAAGAGCTCCCAATGCCCAAAATGCAAGAACAATGTGTTCCTTGATTTCTTCCAGCACCACCGTCAACATAATTACAAGAACTAG MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSLSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFQHHRQHNYKN Homology
BLAST of MC02g0181 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.8e-10 Identity = 47/114 (41.23%), Postives = 67/114 (58.77%), Query Frame = 0
BLAST of MC02g0181 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.2e-10 Identity = 41/97 (42.27%), Postives = 50/97 (51.55%), Query Frame = 0
BLAST of MC02g0181 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 3.6e-05 Identity = 36/101 (35.64%), Postives = 52/101 (51.49%), Query Frame = 0
BLAST of MC02g0181 vs. NCBI nr
Match: KGN48041.1 (hypothetical protein Csa_002820 [Cucumis sativus]) HSP 1 Score: 112 bits (281), Expect = 1.73e-29 Identity = 71/121 (58.68%), Postives = 80/121 (66.12%), Query Frame = 0
BLAST of MC02g0181 vs. NCBI nr
Match: KAA0061725.1 (hypothetical protein E6C27_scaffold212G001000 [Cucumis melo var. makuwa] >TYJ96061.1 hypothetical protein E5676_scaffold182G00200 [Cucumis melo var. makuwa]) HSP 1 Score: 111 bits (278), Expect = 4.53e-29 Identity = 71/118 (60.17%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of MC02g0181 vs. NCBI nr
Match: KAG7010337.1 (hypothetical protein SDJN02_27130, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 102 bits (254), Expect = 1.94e-25 Identity = 65/116 (56.03%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of MC02g0181 vs. NCBI nr
Match: KAG7035922.1 (hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 102 bits (253), Expect = 6.23e-25 Identity = 62/117 (52.99%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of MC02g0181 vs. NCBI nr
Match: KAG6605971.1 (hypothetical protein SDJN03_03288, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 102 bits (253), Expect = 2.72e-24 Identity = 62/117 (52.99%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of MC02g0181 vs. ExPASy TrEMBL
Match: A0A0A0KJX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425780 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 8.38e-30 Identity = 71/121 (58.68%), Postives = 80/121 (66.12%), Query Frame = 0
BLAST of MC02g0181 vs. ExPASy TrEMBL
Match: A0A5D3BBS4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00200 PE=4 SV=1) HSP 1 Score: 111 bits (278), Expect = 2.19e-29 Identity = 71/118 (60.17%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of MC02g0181 vs. ExPASy TrEMBL
Match: S8CR85 (Uncharacterized protein OS=Genlisea aurea OX=192259 GN=M569_05015 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 9.08e-15 Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of MC02g0181 vs. ExPASy TrEMBL
Match: A0A0K9QVF9 (Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_141940 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.11e-14 Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 0
BLAST of MC02g0181 vs. ExPASy TrEMBL
Match: A0A1S3VZ34 (uncharacterized protein LOC106779913 OS=Vigna radiata var. radiata OX=3916 GN=LOC106779913 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 7.94e-14 Identity = 49/110 (44.55%), Postives = 59/110 (53.64%), Query Frame = 0
BLAST of MC02g0181 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 3.4e-11 Identity = 47/114 (41.23%), Postives = 67/114 (58.77%), Query Frame = 0
BLAST of MC02g0181 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 64.7 bits (156), Expect = 5.9e-11 Identity = 41/97 (42.27%), Postives = 50/97 (51.55%), Query Frame = 0
BLAST of MC02g0181 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 2.5e-06 Identity = 36/101 (35.64%), Postives = 52/101 (51.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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