MC01g_new0419 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACGTCATGGGTGGTGAAGCATTCTTTCGCCGCCTCCCAGCTGTTGATCACGACGGCTTTGCGGATACCCAATTGGATGGAGAAGATTGGACCGTATTCATCTGCCAAAGCACTCAGCTTTATATGGGGCAGTTCAGGCCCTCCGAGGAGAGGAAGGTGCCCAATTAGAGGCCACCCGCCGGCCACTGTGGGCGGATTTAGACCCTTTGATGCAGCGGCGCCGGTGAATGTTTTGAGGAGAAAACGGAAGACATTGATGGCAATGACACCGGCGAGAAGGGTGGTAATCACGTTGAGCCAATTGAACTGCGGATTTGATTCCTTCGTCGAAGGAGGGGCGGAGGATTAA ATGGCAACGTCATGGGTGGTGAAGCATTCTTTCGCCGCCTCCCAGCTGTTGATCACGACGGCTTTGCGGATACCCAATTGGATGGAGAAGATTGGACCGTATTCATCTGCCAAAGCACTCAGCTTTATATGGGGCAGTTCAGGCCCTCCGAGGAGAGGAAGGTGCCCAATTAGAGGCCACCCGCCGGCCACTGTGGGCGGATTTAGACCCTTTGATGCAGCGGCGCCGGTGAATGTTTTGAGGAGAAAACGGAAGACATTGATGGCAATGACACCGGCGAGAAGGGTGGTAATCACGTTGAGCCAATTGAACTGCGGATTTGATTCCTTCGTCGAAGGAGGGGCGGAGGATTAA ATGGCAACGTCATGGGTGGTGAAGCATTCTTTCGCCGCCTCCCAGCTGTTGATCACGACGGCTTTGCGGATACCCAATTGGATGGAGAAGATTGGACCGTATTCATCTGCCAAAGCACTCAGCTTTATATGGGGCAGTTCAGGCCCTCCGAGGAGAGGAAGGTGCCCAATTAGAGGCCACCCGCCGGCCACTGTGGGCGGATTTAGACCCTTTGATGCAGCGGCGCCGGTGAATGTTTTGAGGAGAAAACGGAAGACATTGATGGCAATGACACCGGCGAGAAGGGTGGTAATCACGTTGAGCCAATTGAACTGCGGATTTGATTCCTTCGTCGAAGGAGGGGCGGAGGATTAA MATSWVVKHSFAASQLLITTALRIPNWMEKIGPYSSAKALSFIWGSSGPPRRGRCPIRGHPPATVGGFRPFDAAAPVNVLRRKRKTLMAMTPARRVVITLSQLNCGFDSFVEGGAED Homology
BLAST of MC01g_new0419 vs. NCBI nr
Match: XP_017603111.1 (PREDICTED: dynein assembly factor with WDR repeat domains 1 [Gossypium arboreum]) HSP 1 Score: 63.9 bits (154), Expect = 5.24e-09 Identity = 34/67 (50.75%), Postives = 39/67 (58.21%), Query Frame = 0
BLAST of MC01g_new0419 vs. NCBI nr
Match: KAG5543331.1 (hypothetical protein RHGRI_016160 [Rhododendron griersonianum]) HSP 1 Score: 61.2 bits (147), Expect = 4.28e-08 Identity = 32/61 (52.46%), Postives = 37/61 (60.66%), Query Frame = 0
BLAST of MC01g_new0419 vs. NCBI nr
Match: GER40627.1 (hypothetical protein STAS_17307, partial [Striga asiatica]) HSP 1 Score: 57.0 bits (136), Expect = 1.13e-06 Identity = 37/89 (41.57%), Postives = 47/89 (52.81%), Query Frame = 0
BLAST of MC01g_new0419 vs. ExPASy TrEMBL
Match: A0A6N2LJN9 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS178029 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.61e-12 Identity = 43/89 (48.31%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of MC01g_new0419 vs. ExPASy TrEMBL
Match: A0A6P4LKT5 (dynein assembly factor with WDR repeat domains 1 OS=Gossypium arboreum OX=29729 GN=LOC108450133 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.54e-09 Identity = 34/67 (50.75%), Postives = 39/67 (58.21%), Query Frame = 0
BLAST of MC01g_new0419 vs. ExPASy TrEMBL
Match: A0A5A7Q8B3 (Uncharacterized protein (Fragment) OS=Striga asiatica OX=4170 GN=STAS_17307 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 5.49e-07 Identity = 37/89 (41.57%), Postives = 47/89 (52.81%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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