MC01g1672 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1672
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Excitatory amino acid transporter
Location	MC01: 20889996 .. 20890367 (-)
RNA-Seq Expression	MC01g1672
Synteny	MC01g1672

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGCGACGATGATCGGAGCCCTTCTGGGCCTCGGCACTCAGATGTATTCTAATGCTCTCCGTAAACTCCCTTACATGCGCCGTACGTTCCTCTCATGAGAAAGCAAAACCCTAACCTTCTCCATTCCTGATTCAGTTTTCACACTTCTTCCTTTGTTTTTTTTAGTTCTGTCATTGATTCCATTTTGTAACTATGCAGATCCGTGGGAGCACGTCGTTGGAATGGGATTGGGAGCCGTCTTCGTCAATCAGCTCGTCAAATGGGACGCTAAGCTCCAGCAGGACCTTGACAAGATGCTCGACAAAGCCAAAGCAGCCAACGAGCGCCGCTACTTTGGTCACTTTCTTCTTCTATCATCTAATTACATTTCT

mRNA sequence

AGTGCGACGATGATCGGAGCCCTTCTGGGCCTCGGCACTCAGATGTATTCTAATGCTCTCCGTAAACTCCCTTACATGCGCCATCCGTGGGAGCACGTCGTTGGAATGGGATTGGGAGCCGTCTTCGTCAATCAGCTCGTCAAATGGGACGCTAAGCTCCAGCAGGACCTTGACAAGATGCTCGACAAAGCCAAAGCAGCCAACGAGCGCCGCTACTTTGGTCACTTTCTTCTTCTATCATCTAATTACATTTCT

Coding sequence (CDS)

AGTGCGACGATGATCGGAGCCCTTCTGGGCCTCGGCACTCAGATGTATTCTAATGCTCTCCGTAAACTCCCTTACATGCGCCATCCGTGGGAGCACGTCGTTGGAATGGGATTGGGAGCCGTCTTCGTCAATCAGCTCGTCAAATGGGACGCTAAGCTCCAGCAGGACCTTGACAAGATGCTCGACAAAGCCAAAGCAGCCAACGAGCGCCGCTACTTTGGTCACTTTCTTCTTCTATCATCTAATTACATTTCT

Protein sequence

SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKMLDKAKAANERRYFGHFLLLSSNYIS

Homology

[Close]

BLAST of MC01g1672 vs. NCBI nr
Match: KAG2689400.1 (hypothetical protein I3760_09G137100 [Carya illinoinensis] >KAG6696262.1 hypothetical protein I3842_09G139500 [Carya illinoinensis] >KAG7963797.1 hypothetical protein I3843_09G135800 [Carya illinoinensis])

HSP 1 Score: 159 bits (401), Expect = 1.03e-48
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 60
          SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDA+LQ+DLDKM
Sbjct: 4  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAQLQEDLDKM 63

Query: 61 LDKAKAANERRYFGHFLLL 79
          LDKAKAANERRYFG+F LL
Sbjct: 64 LDKAKAANERRYFGNFFLL 82

[Close]

BLAST of MC01g1672 vs. NCBI nr
Match: KAE8647788.1 (hypothetical protein Csa_003686 [Cucumis sativus])

HSP 1 Score: 159 bits (401), Expect = 5.66e-48
Identity = 76/84 (90.48%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 60
          SATMIGALLGLGTQMYSNALRKLPYMRHPWEH+VGMGLGAVFVNQLVKWDAKLQ+DLDKM
Sbjct: 4  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDLDKM 63

Query: 61 LDKAKAANERRYFGHFLLLSSNYI 84
          LDKAKAANERRYFG   LLSS ++
Sbjct: 64 LDKAKAANERRYFGICFLLSSYFL 87

[Close]

BLAST of MC01g1672 vs. NCBI nr
Match: EXB83240.1 (hypothetical protein L484_011534 [Morus notabilis])

HSP 1 Score: 155 bits (391), Expect = 5.98e-47
Identity = 74/82 (90.24%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 60
          S+TMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDA+LQ+DLDKM
Sbjct: 4  SSTMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAQLQEDLDKM 63

Query: 61 LDKAKAANERRYFGHFLLLSSN 82
          L+KAKAANERRYFG  LLL S+
Sbjct: 64 LEKAKAANERRYFGCVLLLRSH 85

[Close]

BLAST of MC01g1672 vs. NCBI nr
Match: KAB1221590.1 (hypothetical protein CJ030_MR2G027097 [Morella rubra])

HSP 1 Score: 154 bits (390), Expect = 7.98e-47
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0


Query: 1  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 60
          SATM+GAL GLGTQMYSNALRKLPYMRHPWEHV+GMGLGAVFVNQLVKWDA+LQ DLDKM
Sbjct: 4  SATMVGALFGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAQLQVDLDKM 63

Query: 61 LDKAKAANERRYFGHFLLLS 80
          LDKAKAANERRYFG F LLS
Sbjct: 64 LDKAKAANERRYFGTFFLLS 83

[Close]

BLAST of MC01g1672 vs. NCBI nr
Match: XP_022146717.1 (uncharacterized protein LOC111015853 [Momordica charantia])

HSP 1 Score: 153 bits (387), Expect = 1.25e-46
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 60
          SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM
Sbjct: 4  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 63

Query: 61 LDKAKAANERRYF 73
          LDKAKAANERRYF
Sbjct: 64 LDKAKAANERRYF 76

[Close]

BLAST of MC01g1672 vs. ExPASy TrEMBL
Match: W9RNQ1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011534 PE=4 SV=1)

HSP 1 Score: 155 bits (391), Expect = 2.89e-47
Identity = 74/82 (90.24%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 60
          S+TMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDA+LQ+DLDKM
Sbjct: 4  SSTMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAQLQEDLDKM 63

Query: 61 LDKAKAANERRYFGHFLLLSSN 82
          L+KAKAANERRYFG  LLL S+
Sbjct: 64 LEKAKAANERRYFGCVLLLRSH 85

[Close]

BLAST of MC01g1672 vs. ExPASy TrEMBL
Match: A0A6A1WFF1 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G027097 PE=4 SV=1)

HSP 1 Score: 154 bits (390), Expect = 3.87e-47
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0


Query: 1  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 60
          SATM+GAL GLGTQMYSNALRKLPYMRHPWEHV+GMGLGAVFVNQLVKWDA+LQ DLDKM
Sbjct: 4  SATMVGALFGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAQLQVDLDKM 63

Query: 61 LDKAKAANERRYFGHFLLLS 80
          LDKAKAANERRYFG F LLS
Sbjct: 64 LDKAKAANERRYFGTFFLLS 83

[Close]

BLAST of MC01g1672 vs. ExPASy TrEMBL
Match: A0A6J1D0C2 (uncharacterized protein LOC111015853 OS=Momordica charantia OX=3673 GN=LOC111015853 PE=4 SV=1)

HSP 1 Score: 153 bits (387), Expect = 6.07e-47
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 60
          SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM
Sbjct: 4  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 63

Query: 61 LDKAKAANERRYF 73
          LDKAKAANERRYF
Sbjct: 64 LDKAKAANERRYF 76

[Close]

BLAST of MC01g1672 vs. ExPASy TrEMBL
Match: A0A5N6NHP9 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_24116 PE=4 SV=1)

HSP 1 Score: 153 bits (386), Expect = 7.89e-47
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 1  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 60
          SATMIGALLGLGTQMYSNALRKLPYMRHPWEHV+GMGLGAVF NQLVKWDAKLQQDLDKM
Sbjct: 4  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFANQLVKWDAKLQQDLDKM 63

Query: 61 LDKAKAANERRYFG 74
          LDKAKAANERRYFG
Sbjct: 64 LDKAKAANERRYFG 77

[Close]

BLAST of MC01g1672 vs. ExPASy TrEMBL
Match: A0A6J1DWB2 (uncharacterized protein LOC111025064 OS=Momordica charantia OX=3673 GN=LOC111025064 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 2.47e-46
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 60
          SATMIGALLGLGTQMYSNALRKLPYMRHPWEHV+GMGLGAVFVNQLVKWDAKLQ+DLDKM
Sbjct: 4  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVIGMGLGAVFVNQLVKWDAKLQEDLDKM 63

Query: 61 LDKAKAANERRYF 73
          LDKAKAANERRYF
Sbjct: 64 LDKAKAANERRYF 76

[Close]

BLAST of MC01g1672 vs. TAIR 10
Match: AT4G20150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 139.4 bits (350), Expect = 1.3e-33
Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = 0


Query: 1  SATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDLDKM 60
          SATM+GALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVF NQLVKWD KL++DLD M
Sbjct: 4  SATMVGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFANQLVKWDVKLKEDLDVM 63

Query: 61 LDKAKAANERRYF 74
          L KA+AANERRYF
Sbjct: 64 LAKARAANERRYF 76

The following BLAST results are available for this feature:

BLAST of MC01g1672 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g1672 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG2689400.1	1.03e-48	94.94	hypothetical protein I3760_09G137100 [Carya illinoinensis] >KAG6696262.1 hypothe...	[more]
KAE8647788.1	5.66e-48	90.48	hypothetical protein Csa_003686 [Cucumis sativus]	[more]
EXB83240.1	5.98e-47	90.24	hypothetical protein L484_011534 [Morus notabilis]	[more]
KAB1221590.1	7.98e-47	91.25	hypothetical protein CJ030_MR2G027097 [Morella rubra]	[more]
XP_022146717.1	1.25e-46	100.00	uncharacterized protein LOC111015853 [Momordica charantia]	[more]

BLAST of MC01g1672 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
W9RNQ1	2.89e-47	90.24	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011534 PE=4 SV=1	[more]
A0A6A1WFF1	3.87e-47	91.25	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G027097 PE=4 SV=1	[more]
A0A6J1D0C2	6.07e-47	100.00	uncharacterized protein LOC111015853 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A5N6NHP9	7.89e-47	97.30	Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_24116 PE=4 SV=1	[more]
A0A6J1DWB2	2.47e-46	97.26	uncharacterized protein LOC111025064 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of MC01g1672 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20150.1	1.3e-33	89.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70
None	No IPR available	PANTHER	PTHR36052	EXCITATORY AMINO ACID TRANSPORTER	coord: 1..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1672.1	MC01g1672.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane