MC01g1203 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g1203
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC01: 17223147 .. 17223869 (-)
RNA-Seq ExpressionMC01g1203
SyntenyMC01g1203
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAAATACTCTCTCCCACCCCACTTCAACACCCTCTCTTCTTTAAATCAAATCTCATCCTGGGTTATCGACTCCATAATTGACGTTTTCTTTCCACTCGAGACCTGTAGAAAAGGAAAAGAAAGAAGAAAAGAAGAAGATGATGCATCGTCATATAGCAACCAAGAGCAATCTTGTCGATTCAAGTCCTGAAACAAACAACAACGTTAACTGTCTCCCTCTCTGCCCCAAGCCTCGTCGTCCTAGACCCACCATCCCCAATTTCCTCGTCCCTCTCAGATGCGCTGATCGCATCCACAGGTCACTTTCTCATCTTACTCTTCTCCAACTTAGTTTTATTACGTATGGAAAAGTTTATGGAAAATTTTGAGAGATTTTCAAAATCTTATTTAATTTGTTCTCTTACTTTAACCAGCCAATCGAGTGGCGAAGGAAGAAATGGGATTCTGAATATCATTGCTGGAAAGGTAAGAAACGGATTACCTTTCTAGAAAATGGATTTCCTTCCCATGATTGGGAATTATTTTGAAAAATTCATGAATATGTGTTGTGTGCAGAATGTTGAAGGGAGAGATTGCTTGTGCTCCAATTGCTACCCATCGTGTTATTCGGGTTCGCCTCCACGAAGAACAGAGAATCCGCTCGTTCACGACGTGTATTTCCTTCATCAAATGGAGCTTCTTTCACCATTTTCGCACACCAAGCTCTCGGAGAAGTTCAGCT

mRNA sequence

AGGAAATACTCTCTCCCACCCCACTTCAACACCCTCTCTTCTTTAAATCAAATCTCATCCTGGGTTATCGACTCCATAATTGACGTTTTCTTTCCACTCGAGACCTGTAGAAAAGGAAAAGAAAGAAGAAAAGAAGAAGATGATGCATCGTCATATAGCAACCAAGAGCAATCTTGTCGATTCAAGTCCTGAAACAAACAACAACGTTAACTGTCTCCCTCTCTGCCCCAAGCCTCGTCGTCCTAGACCCACCATCCCCAATTTCCTCGTCCCTCTCAGATGCGCTGATCGCATCCACAGAATGTTGAAGGGAGAGATTGCTTGTGCTCCAATTGCTACCCATCGTGTTATTCGGGTTCGCCTCCACGAAGAACAGAGAATCCGCTCGTTCACGACGTGTATTTCCTTCATCAAATGGAGCTTCTTTCACCATTTTCGCACACCAAGCTCTCGGAGAAGTTCAGCT

Coding sequence (CDS)

ATGATGCATCGTCATATAGCAACCAAGAGCAATCTTGTCGATTCAAGTCCTGAAACAAACAACAACGTTAACTGTCTCCCTCTCTGCCCCAAGCCTCGTCGTCCTAGACCCACCATCCCCAATTTCCTCGTCCCTCTCAGATGCGCTGATCGCATCCACAGAATGTTGAAGGGAGAGATTGCTTGTGCTCCAATTGCTACCCATCGTGTTATTCGGGTTCGCCTCCACGAAGAACAGAGAATCCGCTCGTTCACGACGTGTATTTCCTTCATCAAATGGAGCTTCTTTCACCATTTTCGCACACCAAGCTCTCGGAGAAGTTCAGCT

Protein sequence

MMHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRMLKGEIACAPIATHRVIRVRLHEEQRIRSFTTCISFIKWSFFHHFRTPSSRRSSA
Homology
BLAST of MC01g1203 vs. NCBI nr
Match: XP_022133306.1 (uncharacterized protein LOC111005918 [Momordica charantia])

HSP 1 Score: 118 bits (295), Expect = 1.61e-31
Identity = 55/59 (93.22%), Postives = 55/59 (93.22%), Query Frame = 0

Query: 1  MMHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRMLKGE 59
          MMHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIH    GE
Sbjct: 1  MMHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHSQSSGE 59

BLAST of MC01g1203 vs. NCBI nr
Match: KAF5454610.1 (hypothetical protein F2P56_024261 [Juglans regia])

HSP 1 Score: 79.7 bits (195), Expect = 2.37e-16
Identity = 53/121 (43.80%), Postives = 62/121 (51.24%), Query Frame = 0

Query: 2   MHRHIATKSNLVDSSPETNNNV----NCLPLCPKPRRPRPTIPNFLVPLRCADR------ 61
           MH     KSNLVDS  ETNN V    N  PLCPKPRR    IP FL P RC+        
Sbjct: 1   MHHLAGGKSNLVDSGSETNNLVSRGNNDHPLCPKPRRLGAAIPEFLKPQRCSKHSQFNTD 60

Query: 62  --------IHRMLKGEIACAPIATHRVIRVRLHEEQRIRSFTTCISFIKWSFFHHFRTPS 104
                   I   ++G+++ A  A H V R  L EE+ I  F  C  FI+W+ FHH R PS
Sbjct: 61  GRKDILNIISEKMEGKLS-AMAAHHHVFRGLLREERVILWFMMCSLFIRWNLFHHLREPS 120

BLAST of MC01g1203 vs. NCBI nr
Match: KAG7026720.1 (hypothetical protein SDJN02_10724, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.4 bits (176), Expect = 1.10e-13
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 0

Query: 2  MHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIH 53
          MH HIA KSNLVDSSPET++N    PLCPKPRR RP IP+FL P RCA RIH
Sbjct: 4  MH-HIAAKSNLVDSSPETDHNAP--PLCPKPRRIRPAIPSFLAPFRCAHRIH 52

BLAST of MC01g1203 vs. NCBI nr
Match: KAG6594753.1 (hypothetical protein SDJN03_11306, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.4 bits (176), Expect = 1.10e-13
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 0

Query: 2  MHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIH 53
          MH HIA KSNLVDSSPET++N    PLCPKPRR RP IP+FL P RCA RIH
Sbjct: 4  MH-HIAAKSNLVDSSPETDHNAP--PLCPKPRRLRPAIPSFLAPFRCAHRIH 52

BLAST of MC01g1203 vs. NCBI nr
Match: KAA0025640.1 (hypothetical protein E6C27_scaffold253G001330 [Cucumis melo var. makuwa] >TYK12513.1 hypothetical protein E5676_scaffold255G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 3.32e-13
Identity = 40/62 (64.52%), Postives = 43/62 (69.35%), Query Frame = 0

Query: 2  MHRHIATKSNLVDSSPETNN----NVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRMLK 59
          MH HIATKSNLVDS  ETN     + N LPLCPKPRR  P IP+FLVPLRCA  IH    
Sbjct: 1  MH-HIATKSNLVDSDLETNQPGFKDNNGLPLCPKPRRLEPAIPSFLVPLRCAHHIHSQSS 60

BLAST of MC01g1203 vs. ExPASy TrEMBL
Match: A0A6J1BUP6 (uncharacterized protein LOC111005918 OS=Momordica charantia OX=3673 GN=LOC111005918 PE=4 SV=1)

HSP 1 Score: 118 bits (295), Expect = 7.78e-32
Identity = 55/59 (93.22%), Postives = 55/59 (93.22%), Query Frame = 0

Query: 1  MMHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRMLKGE 59
          MMHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIH    GE
Sbjct: 1  MMHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHSQSSGE 59

BLAST of MC01g1203 vs. ExPASy TrEMBL
Match: A0A5D3CKV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00940 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.61e-13
Identity = 40/62 (64.52%), Postives = 43/62 (69.35%), Query Frame = 0

Query: 2  MHRHIATKSNLVDSSPETNN----NVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRMLK 59
          MH HIATKSNLVDS  ETN     + N LPLCPKPRR  P IP+FLVPLRCA  IH    
Sbjct: 1  MH-HIATKSNLVDSDLETNQPGFKDNNGLPLCPKPRRLEPAIPSFLVPLRCAHHIHSQSS 60

BLAST of MC01g1203 vs. ExPASy TrEMBL
Match: A0A0A0KHD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507270 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.12e-10
Identity = 37/62 (59.68%), Postives = 40/62 (64.52%), Query Frame = 0

Query: 2  MHRHIATKSNLVDSSPETNNNV----NCLPLCPKPRRPRPTIPNFLVPLRCADRIHRMLK 59
          MH H ATKSNLVDS  ETN +     N LPLCPKPRR  P IP+FL PL CA  IH    
Sbjct: 1  MH-HRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSS 60

BLAST of MC01g1203 vs. ExPASy TrEMBL
Match: A0A6P4PL11 (uncharacterized protein LOC108474001 isoform X1 OS=Gossypium arboreum OX=29729 GN=LOC108474001 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.86e-09
Identity = 41/103 (39.81%), Postives = 46/103 (44.66%), Query Frame = 0

Query: 4   RHIATKSNLVDSSPETNN---NVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRMLKGEI 63
           +H+  KSNL+DS  ET          PLCPKPRR  P +P FL PLRC         G  
Sbjct: 2   QHLPVKSNLLDSGSETTKFGFGGYEQPLCPKPRRVGPVVPEFLKPLRCTKHSELNTDGRS 61

Query: 64  ACAPIATHRVIRVRLHEEQRIRSFTTCISFIKWSFFHHFRTPS 103
               I         L  EQ    F T  SF +WSFFH    PS
Sbjct: 62  GVLNIIAETG---HLQAEQATLWFMTSTSFTRWSFFHLSPEPS 101

BLAST of MC01g1203 vs. ExPASy TrEMBL
Match: B9T722 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0311070 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.53e-06
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 0

Query: 2  MHRHIATKSNLVDSSPETNN---NVNCLPLCPKPRRPRPTIPNFLVPLRCAD 50
          MH H+  KSNLVDS  ET       N  PLCPKPRR  PT+P FL PLRC++
Sbjct: 1  MH-HLPVKSNLVDSGSETAKLCFGGNNQPLCPKPRRVGPTVPEFLKPLRCSN 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022133306.11.61e-3193.22uncharacterized protein LOC111005918 [Momordica charantia][more]
KAF5454610.12.37e-1643.80hypothetical protein F2P56_024261 [Juglans regia][more]
KAG7026720.11.10e-1373.08hypothetical protein SDJN02_10724, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6594753.11.10e-1373.08hypothetical protein SDJN03_11306, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0025640.13.32e-1364.52hypothetical protein E6C27_scaffold253G001330 [Cucumis melo var. makuwa] >TYK125... [more]
Match NameE-valueIdentityDescription
A0A6J1BUP67.78e-3293.22uncharacterized protein LOC111005918 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A5D3CKV61.61e-1364.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KHD11.12e-1059.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507270 PE=4 SV=1[more]
A0A6P4PL111.86e-0939.81uncharacterized protein LOC108474001 isoform X1 OS=Gossypium arboreum OX=29729 G... [more]
B9T7221.53e-0657.69Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0311070 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g1203.1MC01g1203.1mRNA