MC01g1119 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g1119
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC01: 16540084 .. 16540188 (+)
RNA-Seq ExpressionMC01g1119
SyntenyMC01g1119
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCCTCGCCGGATTCCAAAACGCGGCCAAATCCTCCGCCGTGTTGTTAAAAAGTTGTTCTTCATCTTTCTCTGTTCCGTCGACCGGAATTCTCCTCCACCGCCC

mRNA sequence

GCTCCTCGCCGGATTCCAAAACGCGGCCAAATCCTCCGCCGTGTTGTTAAAAAGTTGTTCTTCATCTTTCTCTGTTCCGTCGACCGGAATTCTCCTCCACCGCCC

Coding sequence (CDS)

GCTCCTCGCCGGATTCCAAAACGCGGCCAAATCCTCCGCCGTGTTGTTAAAAAGTTGTTCTTCATCTTTCTCTGTTCCGTCGACCGGAATTCTCCTCCACCGCCC

Protein sequence

APRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP
Homology
[Close]
BLAST of MC01g1119 vs. NCBI nr
Match: KAG6594821.1 (hypothetical protein SDJN03_11374, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 51.2 bits (121), Expect = 9.64e-07
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0 

Query: 1  APRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP 35
          APR IPKRGQ+LRR++KKLFF+  CS    SPPPP
Sbjct: 56 APRWIPKRGQVLRRILKKLFFLCFCS----SPPPP 86

[Close]
BLAST of MC01g1119 vs. NCBI nr
Match: KGN49746.1 (hypothetical protein Csa_017810 [Cucumis sativus])

HSP 1 Score: 48.5 bits (114), Expect = 3.75e-06
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0 

Query: 1  APRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP 35
          APR IPKRG++LRRV+K LFF  LCS     PP P
Sbjct: 6  APRWIPKRGEVLRRVLKNLFFFCLCSPPALPPPTP 40

[Close]
BLAST of MC01g1119 vs. NCBI nr
Match: KAG6579170.1 (hypothetical protein SDJN03_23618, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 47.4 bits (111), Expect = 1.32e-05
Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 0 

Query: 1  APRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP 35
           PR IPKRG +LRRV++KLFF  +CS      PPP
Sbjct: 15 TPRLIPKRGAVLRRVLEKLFFFCICSAANPKAPPP 49

[Close]
BLAST of MC01g1119 vs. ExPASy TrEMBL
Match: A0A0A0KPU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G098990 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.82e-06
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0 

Query: 1  APRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP 35
          APR IPKRG++LRRV+K LFF  LCS     PP P
Sbjct: 6  APRWIPKRGEVLRRVLKNLFFFCLCSPPALPPPTP 40

The following BLAST results are available for this feature:
BLAST of MC01g1119 vs.
Match NameE-valueIdentityDescription
BLAST of MC01g1119 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6594821.19.64e-0768.57hypothetical protein SDJN03_11374, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN49746.13.75e-0662.86hypothetical protein Csa_017810 [Cucumis sativus][more]
KAG6579170.11.32e-0557.14hypothetical protein SDJN03_23618, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of MC01g1119 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPU01.82e-0662.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G098990 PE=4 SV=1[more]
BLAST of MC01g1119 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g1119.1MC01g1119.1mRNA