MC01g1080 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1080
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Translation initiation factor IF-2, putative isoform 1
Location	MC01: 16190544 .. 16193375 (+)
RNA-Seq Expression	MC01g1080
Synteny	MC01g1080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCCGCCCAATCCTTTCCAAATCTCAACACTGCTTCTTGGCCGGAGCTGGAACGGAGGACGAGAGGGAATTCGCGGCAGTTTCCGACGTAGTCCGATTCATTTATTCCCGCATCCGGTGGATAGATTTCGTCAAGTTCCAAAACTAATTGAAATAAATTCAGGTTATTGGCTTTAATTTGTGTTTATTTATGTCCATTATTGCTGCAAAACTTCAATTAATGTCACTATGCGCTACATTTAGGGTTTTGAAAGTCTTTGTATTGCTGCCGTTTATGAAAATTCAGGTGTAAAGCACTGATTCGTTTCAGAATGCCGCAACGTGAGTAGTCCATTAAAGTCAAGAAAGAGTCGTCGCTGAGCATGGCGAGGCGAAAGGCGAAGAAAACAGCTAAGAAGTTGAGCCCTTCTCCTGTGCGTGAAGCAGAGAATGAGTCAAAACCTGAGGAGCAAGCACCTTTGGTGTCCAACGAGGATGGTATGTTGAAATTCATATTGGTTCCAATCCTTTTCCCGAAGTCGGAGCTTAGTTGTAGGATGGAAACTTTATTTTGTTTTTCTTCCAATGGCAAATTGTCCGGAGGTTTTAAAGTAATTGGTCCGCTGCTTTTGCCTTCATTTCTGTATAGTTGAGCGGCATGCTGCTGCAATACGTGCCATTCGGGATGTGGAAATCGAGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTATATTGCAATTTTTCGAAGAAAAACTTCCAAACTTGTCCATTTCAGCAACAGGCGAACAAGGGGAAATAGAAGTGCAATGGAAGGATGCAGCGGGAGAATTACACACTAAGCCTGCTGACGGAATAGACATACATGCTTCTCTCCTGCATCGCTTGTCCATAGCTTATCCTAACTGCTCTGCCGGAATGCAATCTATGAACGGTTTTGAATTTTCCAGTAAATCAGGTATCTGCGGATTCTGCATTATGGTGTATAAAACTAATTGGTAAGTACCCCCATATGTTTTTCTTGTTTGTTGAAACTAACCATATTTTCTCTATTGGCGGCAGTGAAAACAAATGCTTTCAATGTCGAGAACTTGCAAATTCCGAGCTTCGTAAGTAATTTTGCATTTGATATCTTAATTTTTTTTAACTGAAATTCTAATATTTGAATGAACGATATCTTACGAGCTCCCAAAATATGTTTTAGTTTGTCTATATCTCTTGTTCGTATTTTTGATCTGTTGAAGAATGCCTTCTCATCTTCACGAGAAATAAAAGCATGTATTGAATTATCATTCATCAGAAGAATGCTTTGGTATTGACTGATCTATTTATGGATGATTTCTGCTTTTTAGGTTTTGGAGGAGCCTTCGGATAGTATGATGCTTGGCATGCCAGACATTCTCCAAACTCCCGGGGTACGTACTATCGCTTGTTATATTAGATTTTTCTTGTTAATATCTTAGAGTTGTCTGTTATTGGTTTTTTCCAACATGGGTTGCCTCGTCGACTCAAATTATTTAGGCACATAGTAGCGTAGGAACAGAATTACAATAGTGGCAGCGTGTTTGTAATAAATTGTTAATGTTATTTTTTAAAATAACTATGGGTACCTAAGCCAACTTATGTGTATATAAACTAATCCAGTAAATAACTATTTAGACTTTTATTAGCTAAATCATGAGCTTCGCAAAGATGGGATATATTGTCCTGGTAATAACTTGGAATCCTGTTTAAGACAGTTGCTTTGTATACCAGTTGGTAAATGGGAAATGAAGTTTGTACTGGTCTTGGTTTTATGATAGGATATTATTTGAAAATACTAGTCTATGAAAGGTTAGATTATAGTTTTTTTCTCTTTCAATTGTTCATTTTGATTTTTGGGTTTGGTTCTTTTCTATATGAGTCGTCAGTGGAAGTGTTACTATGGATGCCAATACCATGCTAAATAGGTAAAGGTTGTCCAGGTTTGTACGTGCACTATCATCTATTGATCAAAGCTATCAACTAGAAGTGAAAAATTTATTGCAGGACTAAGTTGTGAGGCAATAACTAATTCTCTCTCATTAAAAGTACAATTTAGAACGTATGAAATAATGACTGCAGTGTGATTGGATTGTTGAGGGATTGATGGGAATGATGACCTCATTTCGGTTACTACTATTATTTTAGTAAGAAACAATTTTATTGATGGAATGGAACTCTGCAAGAGGAGGGAAAAGCAGGGAGCTACAAAAAAGAATTCCAATAAGTACAAAGACTAGTAAGGCTATAATTAGAAAACGATTATGAATTTTATACTTGGTAAAGTCTCAGGCTTCTTGGAGATTGTTTCAAAACAATTTTCTCATCTTTTTTGAAAAATTCAGCAATATGTTTGGATAACTGGTTTTTTTTTTTTTTTTTAGTGTATTCTACAAAAAGCTTAACCCCAAGGAAGGAAGTCGTAAAGACTTCCAACATCTACAAAGAGTAGCAAGGCTATAATTAGAAAAACAATTGTGAAGTTTACACCAAGTTGTGATGTCCTAGGTTTTAGAATTTTTTTACAATGGTTTTCTGTTTTTCGTAAAACTCATTAGCATAGATAACTGTTTAGGTTATACATATACACAATCTATAGCGTTGTTTCGGGTTTAATTATTGATTGTGCTTCAAATGCTAAAGTAATTAGTTATTGTTTAATAGGTATGCAACCAAAGATTGTCCATTGGGATGACACCGAAAACCCGAAGGCTGCCGAAGCCTGGTGAGATGCTTGTATCCATCCATGGATCTCCCCTTGGTGTTTACAAGGAAGACAACATGGAAGCAATACATGGTATG

mRNA sequence

TCCCCGCCCAATCCTTTCCAAATCTCAACACTGCTTCTTGGCCGGAGCTGGAACGGAGGACGAGAGGGAATTCGCGGCAGTTTCCGACGTAGTCCGATTCATTTATTCCCGCATCCGGTGGATAGATTTCGTCAAGTTCCAAAACTAATTGAAATAAATTCAGGTGTAAAGCACTGATTCGTTTCAGAATGCCGCAACGTGAGTAGTCCATTAAAGTCAAGAAAGAGTCGTCGCTGAGCATGGCGAGGCGAAAGGCGAAGAAAACAGCTAAGAAGTTGAGCCCTTCTCCTGTGCGTGAAGCAGAGAATGAGTCAAAACCTGAGGAGCAAGCACCTTTGGTGTCCAACGAGGATGTTGAGCGGCATGCTGCTGCAATACGTGCCATTCGGGATGTGGAAATCGAGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTATATTGCAATTTTTCGAAGAAAAACTTCCAAACTTGTCCATTTCAGCAACAGGCGAACAAGGGGAAATAGAAGTGCAATGGAAGGATGCAGCGGGAGAATTACACACTAAGCCTGCTGACGGAATAGACATACATGCTTCTCTCCTGCATCGCTTGTCCATAGCTTATCCTAACTGCTCTGCCGGAATGCAATCTATGAACGGTTTTGAATTTTCCAGTAAATCAGTGAAAACAAATGCTTTCAATGTCGAGAACTTGCAAATTCCGAGCTTCGTTTTGGAGGAGCCTTCGGATAGTATGATGCTTGGCATGCCAGACATTCTCCAAACTCCCGGGGTATGCAACCAAAGATTGTCCATTGGGATGACACCGAAAACCCGAAGGCTGCCGAAGCCTGGTGAGATGCTTGTATCCATCCATGGATCTCCCCTTGGTGTTTACAAGGAAGACAACATGGAAGCAATACATGGTATG

Coding sequence (CDS)

ATGGCGAGGCGAAAGGCGAAGAAAACAGCTAAGAAGTTGAGCCCTTCTCCTGTGCGTGAAGCAGAGAATGAGTCAAAACCTGAGGAGCAAGCACCTTTGGTGTCCAACGAGGATGTTGAGCGGCATGCTGCTGCAATACGTGCCATTCGGGATGTGGAAATCGAGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTATATTGCAATTTTTCGAAGAAAAACTTCCAAACTTGTCCATTTCAGCAACAGGCGAACAAGGGGAAATAGAAGTGCAATGGAAGGATGCAGCGGGAGAATTACACACTAAGCCTGCTGACGGAATAGACATACATGCTTCTCTCCTGCATCGCTTGTCCATAGCTTATCCTAACTGCTCTGCCGGAATGCAATCTATGAACGGTTTTGAATTTTCCAGTAAATCAGTGAAAACAAATGCTTTCAATGTCGAGAACTTGCAAATTCCGAGCTTCGTTTTGGAGGAGCCTTCGGATAGTATGATGCTTGGCATGCCAGACATTCTCCAAACTCCCGGGGTATGCAACCAAAGATTGTCCATTGGGATGACACCGAAAACCCGAAGGCTGCCGAAGCCTGGTGAGATGCTTGTATCCATCCATGGATCTCCCCTTGGTGTTTACAAGGAAGACAACATGGAAGCAATACATGGTATG

Protein sequence

MARRKAKKTAKKLSPSPVREAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGIDIHASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSMMLGMPDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHGM

Homology

[Close]

BLAST of MC01g1080 vs. NCBI nr
Match: XP_022133198.1 (uncharacterized protein LOC111005854 [Momordica charantia])

HSP 1 Score: 452 bits (1162), Expect = 7.26e-160
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MARRKAKKTAKKLSPSPVREAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLITE 60
           MARRKAKKTAKKLSPSPVREAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLITE
Sbjct: 1   MARRKAKKTAKKLSPSPVREAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLITE 60

Query: 61  LRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGIDI 120
           LRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGIDI
Sbjct: 61  LRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGIDI 120

Query: 121 HASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSMMLGM 180
           HASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSMMLGM
Sbjct: 121 HASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSMMLGM 180

Query: 181 PDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 232
           PDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH
Sbjct: 181 PDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 232

[Close]

BLAST of MC01g1080 vs. NCBI nr
Match: KAG6604007.1 (hypothetical protein SDJN03_04616, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390 bits (1003), Expect = 1.43e-135
Identity = 201/236 (85.17%), Postives = 215/236 (91.10%), Query Frame = 0


Query: 1   MARRKAKKTAKKLSPSPVREAE----NESKPEEQAPLVSNEDVERHAAAIRAIRDVEIER 60
           MARRKAKK+ KK SPSP+REA+    NE K E+QA LVS+EDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPIREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPAD 120
           LITELRLLRSYFNKEQLQTP+LQFFEEKLP+LSIS  GEQGEIEVQWKD   ELHT PAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSM 180
           GIDIHASLLHRLS AYPNCSAGM+S NGFEFSSKSVKTN FNVENLQIP+F LEEPSD+M
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 181 MLGMPDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 232
           +LGMPD+LQTPGV NQRLSIGMTPKTRRLPKPGE+LVSIHGSPLGVY+EDNMEAIH
Sbjct: 181 VLGMPDLLQTPGVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREDNMEAIH 236

[Close]

BLAST of MC01g1080 vs. NCBI nr
Match: XP_023543921.1 (uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387 bits (995), Expect = 2.36e-134
Identity = 200/236 (84.75%), Postives = 215/236 (91.10%), Query Frame = 0


Query: 1   MARRKAKKTAKKLSPSPVREAE----NESKPEEQAPLVSNEDVERHAAAIRAIRDVEIER 60
           MARRKAKK+ KK SPSPVREA+    NE K E+QA LVS+EDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPAD 120
           LITELRLLRSYFNKEQLQTP+LQFFEEKLP+LSIS  GEQGEIEVQWK+   ELHT PAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSM 180
           GIDIHASLLHRLS AYPNCSAGM+S NGFEFSSKSVKTN FNVENLQIP+F LEEPSD+M
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 181 MLGMPDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 232
           +LGMPD+LQTPGV NQRLSIGMTPKTRRLPKPGE+LVSIHGSPLGVY+E+NMEAIH
Sbjct: 181 VLGMPDLLQTPGVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREENMEAIH 236

[Close]

BLAST of MC01g1080 vs. NCBI nr
Match: KAG7034170.1 (hypothetical protein SDJN02_03897, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385 bits (988), Expect = 3.29e-133
Identity = 202/241 (83.82%), Postives = 215/241 (89.21%), Query Frame = 0


Query: 1   MARRKAKKTAKKLSPSPVREAE----NESKPEEQAPLVSNEDVERHAAAIRAIRDVEIER 60
           MARRKAKK+ KK SPSPVREA+    NE K E+QA LVS+EDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPAD 120
           LITELRLLRSYFNKEQLQTP+LQFFEEKLP+LSIS  GEQGEIEVQWKD   ELHT PAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSM 180
           GIDIHASLLHRLS AYPNCSAGM+S NGFEFSSKSVKTN FNVENLQIP+F LEEPSD+M
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 181 MLGMPDILQTPGV-----CNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAI 232
           +LGMPD+LQTPGV      NQRLSIGMTPKTRRLPKPGE+LVSIHGSPLGVY+EDNMEAI
Sbjct: 181 VLGMPDLLQTPGVRIFMVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREDNMEAI 240

[Close]

BLAST of MC01g1080 vs. NCBI nr
Match: XP_022978547.1 (uncharacterized protein LOC111478496 [Cucurbita maxima])

HSP 1 Score: 382 bits (982), Expect = 2.26e-132
Identity = 198/236 (83.90%), Postives = 213/236 (90.25%), Query Frame = 0


Query: 1   MARRKAKKTAKKLSPSPVREAE----NESKPEEQAPLVSNEDVERHAAAIRAIRDVEIER 60
           MARRKAKK+ KK SPSPVREA+    NE K E+QA LVS+EDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPAD 120
           LITELRLLRSYFNKEQLQTP+LQFF EKLP+LSIS  GEQGEIEVQWKD   ELHT PAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFVEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSM 180
           GIDIHASLLHRLS AYPNCSAG++S NGFEFSSKSVKTN FNVENLQIP+FVLEEPSD+M
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGIRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNM 180

Query: 181 MLGMPDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 232
           +LGMPD+LQTPG  NQRLSIGMTPKTRRLPKPGE++VSIHGSPLGVY+E NMEAIH
Sbjct: 181 VLGMPDLLQTPGASNQRLSIGMTPKTRRLPKPGEVIVSIHGSPLGVYREYNMEAIH 236

[Close]

BLAST of MC01g1080 vs. ExPASy TrEMBL
Match: A0A6J1BYE7 (uncharacterized protein LOC111005854 OS=Momordica charantia OX=3673 GN=LOC111005854 PE=4 SV=1)

HSP 1 Score: 452 bits (1162), Expect = 3.51e-160
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MARRKAKKTAKKLSPSPVREAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLITE 60
           MARRKAKKTAKKLSPSPVREAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLITE
Sbjct: 1   MARRKAKKTAKKLSPSPVREAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLITE 60

Query: 61  LRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGIDI 120
           LRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGIDI
Sbjct: 61  LRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGIDI 120

Query: 121 HASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSMMLGM 180
           HASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSMMLGM
Sbjct: 121 HASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSMMLGM 180

Query: 181 PDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 232
           PDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH
Sbjct: 181 PDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 232

[Close]

BLAST of MC01g1080 vs. ExPASy TrEMBL
Match: A0A6J1ILD3 (uncharacterized protein LOC111478496 OS=Cucurbita maxima OX=3661 GN=LOC111478496 PE=4 SV=1)

HSP 1 Score: 382 bits (982), Expect = 1.09e-132
Identity = 198/236 (83.90%), Postives = 213/236 (90.25%), Query Frame = 0


Query: 1   MARRKAKKTAKKLSPSPVREAE----NESKPEEQAPLVSNEDVERHAAAIRAIRDVEIER 60
           MARRKAKK+ KK SPSPVREA+    NE K E+QA LVS+EDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPAD 120
           LITELRLLRSYFNKEQLQTP+LQFF EKLP+LSIS  GEQGEIEVQWKD   ELHT PAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFVEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSM 180
           GIDIHASLLHRLS AYPNCSAG++S NGFEFSSKSVKTN FNVENLQIP+FVLEEPSD+M
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGIRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNM 180

Query: 181 MLGMPDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 232
           +LGMPD+LQTPG  NQRLSIGMTPKTRRLPKPGE++VSIHGSPLGVY+E NMEAIH
Sbjct: 181 VLGMPDLLQTPGASNQRLSIGMTPKTRRLPKPGEVIVSIHGSPLGVYREYNMEAIH 236

[Close]

BLAST of MC01g1080 vs. ExPASy TrEMBL
Match: A0A5A7SXV4 (Translation initiation factor IF-2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002410 PE=4 SV=1)

HSP 1 Score: 376 bits (966), Expect = 2.33e-130
Identity = 194/234 (82.91%), Postives = 210/234 (89.74%), Query Frame = 0


Query: 1   MARRKAKKTAKKLSPSPVREAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLITE 60
           MARRKAKKT KK SPS  R A++E+   ++    S+EDVERHAAAIRAIRDVEIERLITE
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAA--DKIKTHSDEDVERHAAAIRAIRDVEIERLITE 60

Query: 61  LRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGIDI 120
           LRLLRSYFNKEQLQTP+LQFFEEKLP+LSIS  G+QGEIEVQWKD   ELHT PADG+DI
Sbjct: 61  LRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPADGVDI 120

Query: 121 HASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSMMLGM 180
           HASLLHRLS AYP CSAGM+S NGFEFSSKSVKTN FN ENLQIP+FVLEEPSD+M+LGM
Sbjct: 121 HASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMVLGM 180

Query: 181 PDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHGM 234
           PDILQTPG+ NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHG+
Sbjct: 181 PDILQTPGISNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHGI 232

[Close]

BLAST of MC01g1080 vs. ExPASy TrEMBL
Match: A0A5D3CLG2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002490 PE=4 SV=1)

HSP 1 Score: 375 bits (962), Expect = 7.95e-130
Identity = 196/232 (84.48%), Postives = 207/232 (89.22%), Query Frame = 0


Query: 1   MARRKAKKTAKKLSPSPVREAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLITE 60
           MARRKAKKT KK +PSPV EA++E+         ++EDVERHAAAIRAIRDVEI RLITE
Sbjct: 1   MARRKAKKTVKKSNPSPVLEAKDET--------ANDEDVERHAAAIRAIRDVEIGRLITE 60

Query: 61  LRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGIDI 120
           LRLLRSYFNKEQLQTP+LQFFEEKLP LSIS TGEQGEIEVQWKD   EL T PADGIDI
Sbjct: 61  LRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDI 120

Query: 121 HASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSMMLGM 180
           HASLLHRLSIAYPNCSAGM+S NGFEFSSKSVKTN F VENLQIP+F LEEPSD+M+LGM
Sbjct: 121 HASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGM 180

Query: 181 PDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 232
           PDILQTPGV NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH
Sbjct: 181 PDILQTPGVINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 224

[Close]

BLAST of MC01g1080 vs. ExPASy TrEMBL
Match: A0A1S3B1M1 (uncharacterized protein LOC103485008 OS=Cucumis melo OX=3656 GN=LOC103485008 PE=4 SV=1)

HSP 1 Score: 375 bits (962), Expect = 7.95e-130
Identity = 196/232 (84.48%), Postives = 207/232 (89.22%), Query Frame = 0


Query: 1   MARRKAKKTAKKLSPSPVREAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLITE 60
           MARRKAKKT KK +PSPV EA++E+         ++EDVERHAAAIRAIRDVEI RLITE
Sbjct: 1   MARRKAKKTVKKSNPSPVLEAKDET--------ANDEDVERHAAAIRAIRDVEIGRLITE 60

Query: 61  LRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGIDI 120
           LRLLRSYFNKEQLQTP+LQFFEEKLP LSIS TGEQGEIEVQWKD   EL T PADGIDI
Sbjct: 61  LRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDI 120

Query: 121 HASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSMMLGM 180
           HASLLHRLSIAYPNCSAGM+S NGFEFSSKSVKTN F VENLQIP+F LEEPSD+M+LGM
Sbjct: 121 HASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGM 180

Query: 181 PDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 232
           PDILQTPGV NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH
Sbjct: 181 PDILQTPGVINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 224

[Close]

BLAST of MC01g1080 vs. TAIR 10
Match: AT4G39630.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 196.8 bits (499), Expect = 1.9e-50
Identity = 115/233 (49.36%), Postives = 155/233 (66.52%), Query Frame = 0


Query: 1   MARRKAKKTAKKLSPSPVREAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLITE 60
           M +RKAK+  K       R  E   + EE+     +E+VER  AAIRAIRDVEIE+++T 
Sbjct: 1   MPKRKAKECVKLTEED--RNDEKRIRIEEKKEDFVDEEVERQIAAIRAIRDVEIEQMLTA 60

Query: 61  LRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGIDI 120
           LRLLRSYF +EQL TP+L FF+E LP+LSIS   E GEIE++W+D  G+      +G+D+
Sbjct: 61  LRLLRSYFTEEQLHTPVLDFFKENLPDLSISRNEETGEIELKWRDENGDSFAGNENGVDM 120

Query: 121 HASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSMMLGM 180
           + S+L RLS+ + +  +   S+ G++    +VK N    +N Q+ + V +  S++ ML  
Sbjct: 121 NYSILKRLSMRFTDLYS-RSSLGGYDLPD-NVKANLLGTDNPQLDNLVFQGTSENQMLPG 180

Query: 181 PDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKED-NMEAIH 233
            D  QTPGV  QRLS GMTPKT RLPK GEM++S+HGSPLGVYKED NM AI+
Sbjct: 181 HDAFQTPGVNGQRLSFGMTPKTLRLPKAGEMMLSVHGSPLGVYKEDHNMGAIN 229

The following BLAST results are available for this feature:

BLAST of MC01g1080 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g1080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133198.1	7.26e-160	100.00	uncharacterized protein LOC111005854 [Momordica charantia]	[more]
KAG6604007.1	1.43e-135	85.17	hypothetical protein SDJN03_04616, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023543921.1	2.36e-134	84.75	uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo]	[more]
KAG7034170.1	3.29e-133	83.82	hypothetical protein SDJN02_03897, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022978547.1	2.26e-132	83.90	uncharacterized protein LOC111478496 [Cucurbita maxima]	[more]

BLAST of MC01g1080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYE7	3.51e-160	100.00	uncharacterized protein LOC111005854 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1ILD3	1.09e-132	83.90	uncharacterized protein LOC111478496 OS=Cucurbita maxima OX=3661 GN=LOC111478496...	[more]
A0A5A7SXV4	2.33e-130	82.91	Translation initiation factor IF-2, putative isoform 1 OS=Cucumis melo var. maku...	[more]
A0A5D3CLG2	7.95e-130	84.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B1M1	7.95e-130	84.48	uncharacterized protein LOC103485008 OS=Cucumis melo OX=3656 GN=LOC103485008 PE=...	[more]

BLAST of MC01g1080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39630.1	1.9e-50	49.36	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..36
None	No IPR available	PANTHER	PTHR37248	TRANSLATION INITIATION FACTOR	coord: 1..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1080.1	MC01g1080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0003743	translation initiation factor activity