MC01g0163 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g0163
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC01: 7595096 .. 7595274 (-)
RNA-Seq ExpressionMC01g0163
SyntenyMC01g0163
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCAGTCTCTTGAAATTGATAGTAAAGTTCATTGAAGCAGCCAACTCAAATTCAAGATTTTGTTGGAGAAGATTGTAGAGCTTTAACAGATTGTGGAGAAGGGAGATTCTACGAGAGAGGCAGTCATGGCCATCCAATTCAGATATAGCTCTCAAGGTGCCCAAGACTCCATGCTCTCT

mRNA sequence

TGCAGTCTCTTGAAATTGATAGTAAAGTTCATTGAAGCAGCCAACTCAAATTCAAGATTTTTGGAGAAGATTGTAGAGCTTTAACAGATTGTGGAGAAGGGAGATTCTACGAGAGAGGCAGTCATGGCCATCCAATTCAGATATAGCTCTCAAGGTGCCCAAGACTCCATGCTCTCT

Coding sequence (CDS)

TGCAGTCTCTTGAAATTGATAGTAAAGTTCATTGAAGCAGCCAACTCAAATTCAAGATTTTTGGAGAAGATTGTAGAGCTTTAACAGATTGTGGAGAAGGGAGATTCTACGAGAGAGGCAGTCATGGCCATCCAATTCAGATATAGCTCTCAAGGTGCCCAAGACTCCATGCTCTCT

Protein sequence

CSLLKLIVKFIEAANSNSRFLEKIVELUQIVEKGDSTREAVMAIQFRYSSQGAQDSMLS
Homology
BLAST of MC01g0163 vs. NCBI nr
Match: XP_022141406.1 (uncharacterized protein LOC111011816 [Momordica charantia])

HSP 1 Score: 70.9 bits (172), Expect = 1.34e-13
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 1   CSLLKLIVKFIEAANSNSRFL-EKIVELXQIVEKGDSTREAVMAIQFRYSSQGAQDS 56
           CS L+   K +E+ NSNSRFL EKIVEL QIVEKGDSTREA MAIQ RYSSQ +  S
Sbjct: 88  CSALETASKLVESTNSNSRFLLEKIVELEQIVEKGDSTREAAMAIQTRYSSQDSMSS 144

BLAST of MC01g0163 vs. NCBI nr
Match: XP_022964546.1 (uncharacterized protein LOC111464539 [Cucurbita moschata])

HSP 1 Score: 70.5 bits (171), Expect = 2.03e-13
Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 1   CSLLKLIVKFIEAANSNSRFL-EKIVELXQIVEKGDSTREAVMAIQFRYSSQGAQDSMLS 59
           CS L    K +E+ NSNSRFL EKIVEL Q++EKGDSTREA MAIQ  +SSQ AQDS+ S
Sbjct: 88  CSALDTASKLVESTNSNSRFLLEKIVELEQVLEKGDSTREAAMAIQTSFSSQVAQDSISS 147

BLAST of MC01g0163 vs. NCBI nr
Match: XP_023516408.1 (uncharacterized protein LOC111780279 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 70.5 bits (171), Expect = 2.03e-13
Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 1   CSLLKLIVKFIEAANSNSRFL-EKIVELXQIVEKGDSTREAVMAIQFRYSSQGAQDSMLS 59
           CS L    K +E+ NSNSRFL EKIVEL Q++EKGDSTREA MAIQ  +SSQ AQDS+ S
Sbjct: 88  CSALDTASKLVESTNSNSRFLLEKIVELEQVLEKGDSTREAAMAIQTSFSSQVAQDSISS 147

BLAST of MC01g0163 vs. NCBI nr
Match: KAG7032788.1 (hypothetical protein SDJN02_06838 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 70.5 bits (171), Expect = 2.03e-13
Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 1   CSLLKLIVKFIEAANSNSRFL-EKIVELXQIVEKGDSTREAVMAIQFRYSSQGAQDSMLS 59
           CS L    K +E+ NSNSRFL EKIVEL Q++EKGDSTREA MAIQ  +SSQ AQDS+ S
Sbjct: 88  CSALDTASKLVESTNSNSRFLLEKIVELEQVLEKGDSTREAAMAIQTSFSSQVAQDSISS 147

BLAST of MC01g0163 vs. NCBI nr
Match: XP_022989818.1 (uncharacterized protein LOC111486891 [Cucurbita maxima])

HSP 1 Score: 69.3 bits (168), Expect = 5.72e-13
Identity = 40/60 (66.67%), Postives = 45/60 (75.00%), Query Frame = 0

Query: 1   CSLLKLIVKFIEAANSNSRFL-EKIVELXQIVEKGDSTREAVMAIQFRYSSQGAQDSMLS 59
           CS L    K +E+ NSNSRFL EKIVEL QI+EKGDSTREA MAIQ  +SSQ  QDS+ S
Sbjct: 88  CSALDTASKLVESTNSNSRFLLEKIVELEQILEKGDSTREAAMAIQTSFSSQVTQDSISS 147

BLAST of MC01g0163 vs. ExPASy TrEMBL
Match: A0A6J1CJ28 (uncharacterized protein LOC111011816 OS=Momordica charantia OX=3673 GN=LOC111011816 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.50e-14
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 1   CSLLKLIVKFIEAANSNSRFL-EKIVELXQIVEKGDSTREAVMAIQFRYSSQGAQDS 56
           CS L+   K +E+ NSNSRFL EKIVEL QIVEKGDSTREA MAIQ RYSSQ +  S
Sbjct: 88  CSALETASKLVESTNSNSRFLLEKIVELEQIVEKGDSTREAAMAIQTRYSSQDSMSS 144

BLAST of MC01g0163 vs. ExPASy TrEMBL
Match: A0A6J1HJ70 (uncharacterized protein LOC111464539 OS=Cucurbita moschata OX=3662 GN=LOC111464539 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.81e-14
Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 1   CSLLKLIVKFIEAANSNSRFL-EKIVELXQIVEKGDSTREAVMAIQFRYSSQGAQDSMLS 59
           CS L    K +E+ NSNSRFL EKIVEL Q++EKGDSTREA MAIQ  +SSQ AQDS+ S
Sbjct: 88  CSALDTASKLVESTNSNSRFLLEKIVELEQVLEKGDSTREAAMAIQTSFSSQVAQDSISS 147

BLAST of MC01g0163 vs. ExPASy TrEMBL
Match: A0A6J1JRF3 (uncharacterized protein LOC111486891 OS=Cucurbita maxima OX=3661 GN=LOC111486891 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.77e-13
Identity = 40/60 (66.67%), Postives = 45/60 (75.00%), Query Frame = 0

Query: 1   CSLLKLIVKFIEAANSNSRFL-EKIVELXQIVEKGDSTREAVMAIQFRYSSQGAQDSMLS 59
           CS L    K +E+ NSNSRFL EKIVEL QI+EKGDSTREA MAIQ  +SSQ  QDS+ S
Sbjct: 88  CSALDTASKLVESTNSNSRFLLEKIVELEQILEKGDSTREAAMAIQTSFSSQVTQDSISS 147

BLAST of MC01g0163 vs. ExPASy TrEMBL
Match: A0A5D3BZV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00780 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.83e-13
Identity = 39/60 (65.00%), Postives = 45/60 (75.00%), Query Frame = 0

Query: 1   CSLLKLIVKFIEAANSNSRFL-EKIVELXQIVEKGDSTREAVMAIQFRYSSQGAQDSMLS 59
           CS L    K +E+ NSNSRFL EKIVEL  ++EKGD+TREA MAIQ  YSSQ AQDS+ S
Sbjct: 89  CSALDTATKLVESTNSNSRFLLEKIVELEHVLEKGDATREAAMAIQTSYSSQIAQDSISS 148

BLAST of MC01g0163 vs. ExPASy TrEMBL
Match: A0A1S3BCT2 (uncharacterized protein LOC103488633 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.89e-13
Identity = 39/60 (65.00%), Postives = 45/60 (75.00%), Query Frame = 0

Query: 1   CSLLKLIVKFIEAANSNSRFL-EKIVELXQIVEKGDSTREAVMAIQFRYSSQGAQDSMLS 59
           CS L    K +E+ NSNSRFL EKIVEL  ++EKGD+TREA MAIQ  YSSQ AQDS+ S
Sbjct: 89  CSALDTATKLVESTNSNSRFLLEKIVELEHVLEKGDATREAAMAIQTSYSSQIAQDSISS 148

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022141406.11.34e-1370.18uncharacterized protein LOC111011816 [Momordica charantia][more]
XP_022964546.12.03e-1366.67uncharacterized protein LOC111464539 [Cucurbita moschata][more]
XP_023516408.12.03e-1366.67uncharacterized protein LOC111780279 [Cucurbita pepo subsp. pepo][more]
KAG7032788.12.03e-1366.67hypothetical protein SDJN02_06838 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022989818.15.72e-1366.67uncharacterized protein LOC111486891 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1CJ286.50e-1470.18uncharacterized protein LOC111011816 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A6J1HJ709.81e-1466.67uncharacterized protein LOC111464539 OS=Cucurbita moschata OX=3662 GN=LOC1114645... [more]
A0A6J1JRF32.77e-1366.67uncharacterized protein LOC111486891 OS=Cucurbita maxima OX=3661 GN=LOC111486891... [more]
A0A5D3BZV12.83e-1365.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BCT22.89e-1365.00uncharacterized protein LOC103488633 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g0163.1MC01g0163.1mRNA