MC01g0156 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g0156
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC01: 7323094 .. 7323282 (+)
RNA-Seq ExpressionMC01g0156
SyntenyMC01g0156
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCTCATCATTCGTCAATTCAATAAGAGTCATCACAATTACCAATCTATGTTCTACTACGATCTTTTAAAGCGTTTTCTCAATTTCGATGAAGGTCCATTGTGCTACAATCCTTCCACTCACTTCACTACCATACCAGGTTTCGCAAAATCATCGATGAACTTCGACAATGACAAATCCTCCTTCATG

mRNA sequence

AAGCTCATCATTCGTCAATTCAATAAGAGTCATCACAATTACCAATCTATGTTCTACTACGATCTTTTAAAGCGTTTTCTCAATTTCGATGAAGGTCCATTGTGCTACAATCCTTCCACTCACTTCACTACCATACCAGGTTTCGCAAAATCATCGATGAACTTCGACAATGACAAATCCTCCTTCATG

Coding sequence (CDS)

AAGCTCATCATTCGTCAATTCAATAAGAGTCATCACAATTACCAATCTATGTTCTACTACGATCTTTTAAAGCGTTTTCTCAATTTCGATGAAGGTCCATTGTGCTACAATCCTTCCACTCACTTCACTACCATACCAGGTTTCGCAAAATCATCGATGAACTTCGACAATGACAAATCCTCCTTCATG

Protein sequence

KLIIRQFNKSHHNYQSMFYYDLLKRFLNFDEGPLCYNPSTHFTTIPGFAKSSMNFDNDKSSFM
Homology
[Close]
BLAST of MC01g0156 vs. NCBI nr
Match: XP_022134303.1 (uncharacterized protein LOC111006597 [Momordica charantia])

HSP 1 Score: 55.5 bits (132), Expect = 1.80e-07
Identity = 35/73 (47.95%), Postives = 40/73 (54.79%), Query Frame = 0 

Query: 1   KLIIRQFNKSHHNYQSMFYYDLLKRFLNFDEGPLCYNP----------STHFTTIPGFAK 60
           K  IRQFNKS  N QS F YD L   LNFDEGP+  +P          ST F  +P  AK
Sbjct: 86  KTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAK 145

Query: 61  SSMNFDNDKSSFM 63
           SSM+   D  SF+
Sbjct: 146 SSMDLGKDGLSFI 158

[Close]
BLAST of MC01g0156 vs. NCBI nr
Match: XP_031741765.1 (uncharacterized protein LOC116403956 [Cucumis sativus] >KGN52385.1 hypothetical protein Csa_008790 [Cucumis sativus])

HSP 1 Score: 50.4 bits (119), Expect = 1.36e-05
Identity = 34/73 (46.58%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 1   KLIIRQFNKSHHNYQSMFYYDLLKRFLNFDEGPLCYNP----------STHFTTIPGFAK 60
           K  IRQF+K+  N QS F YD L   LNFDEGP   +P          ST F  IP  AK
Sbjct: 81  KTFIRQFHKNR-NRQSTFRYDPLSYSLNFDEGPAHDDPFTDDFVRRDFSTRFAAIPASAK 140

Query: 61  SSMNFDNDKSSFM 63
           SSM+   D  SF+
Sbjct: 141 SSMDLGKDSPSFI 152

[Close]
BLAST of MC01g0156 vs. NCBI nr
Match: XP_038889212.1 (uncharacterized protein LOC120079097 [Benincasa hispida])

HSP 1 Score: 49.7 bits (117), Expect = 2.65e-05
Identity = 34/73 (46.58%), Postives = 38/73 (52.05%), Query Frame = 0 

Query: 1   KLIIRQFNKSHHNYQSMFYYDLLKRFLNFDEGPLCYNP----------STHFTTIPGFAK 60
           K  IRQFNK+  N QS F YD L   LNFDEGP   +P          ST F  IP  AK
Sbjct: 80  KTFIRQFNKNR-NRQSTFRYDPLSYSLNFDEGPAHDDPFSDDLVRRDFSTRFAAIPASAK 139

Query: 61  SSMNFDNDKSSFM 63
           SSM+   D   F+
Sbjct: 140 SSMDLGKDGPPFI 151

[Close]
BLAST of MC01g0156 vs. NCBI nr
Match: XP_023533538.1 (uncharacterized protein LOC111795380 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 48.9 bits (115), Expect = 5.29e-05
Identity = 32/73 (43.84%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 1   KLIIRQFNKSHHNYQSMFYYDLLKRFLNFDEGPLCYNP----------STHFTTIPGFAK 60
           K  IRQF+K+ H  QS + YD L   LNFDEGP   +P          S  F +IP  AK
Sbjct: 81  KTFIRQFHKNRHR-QSTYRYDPLSYALNFDEGPALDDPFSEDFMRRDFSMRFASIPASAK 140

Query: 61  SSMNFDNDKSSFM 63
           SSM+   D  SF+
Sbjct: 141 SSMDLGKDGPSFI 152

[Close]
BLAST of MC01g0156 vs. NCBI nr
Match: KAG6602448.1 (hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033131.1 hypothetical protein SDJN02_07184, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 48.9 bits (115), Expect = 5.29e-05
Identity = 32/73 (43.84%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 1   KLIIRQFNKSHHNYQSMFYYDLLKRFLNFDEGPLCYNP----------STHFTTIPGFAK 60
           K  IRQF+K+ H  QS + YD L   LNFDEGP   +P          S  F +IP  AK
Sbjct: 81  KTFIRQFHKNRHR-QSTYRYDPLSYALNFDEGPALDDPFSEDFMRRDFSMRFASIPASAK 140

Query: 61  SSMNFDNDKSSFM 63
           SSM+   D  SF+
Sbjct: 141 SSMDLGKDGPSFI 152

[Close]
BLAST of MC01g0156 vs. ExPASy TrEMBL
Match: A0A6J1C1N0 (uncharacterized protein LOC111006597 OS=Momordica charantia OX=3673 GN=LOC111006597 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.71e-08
Identity = 35/73 (47.95%), Postives = 40/73 (54.79%), Query Frame = 0 

Query: 1   KLIIRQFNKSHHNYQSMFYYDLLKRFLNFDEGPLCYNP----------STHFTTIPGFAK 60
           K  IRQFNKS  N QS F YD L   LNFDEGP+  +P          ST F  +P  AK
Sbjct: 86  KTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAK 145

Query: 61  SSMNFDNDKSSFM 63
           SSM+   D  SF+
Sbjct: 146 SSMDLGKDGLSFI 158

[Close]
BLAST of MC01g0156 vs. ExPASy TrEMBL
Match: A0A0A0KRY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630870 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 6.60e-06
Identity = 34/73 (46.58%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 1   KLIIRQFNKSHHNYQSMFYYDLLKRFLNFDEGPLCYNP----------STHFTTIPGFAK 60
           K  IRQF+K+  N QS F YD L   LNFDEGP   +P          ST F  IP  AK
Sbjct: 81  KTFIRQFHKNR-NRQSTFRYDPLSYSLNFDEGPAHDDPFTDDFVRRDFSTRFAAIPASAK 140

Query: 61  SSMNFDNDKSSFM 63
           SSM+   D  SF+
Sbjct: 141 SSMDLGKDSPSFI 152

[Close]
BLAST of MC01g0156 vs. ExPASy TrEMBL
Match: A0A6J1HFG4 (uncharacterized protein LOC111462557 OS=Cucurbita moschata OX=3662 GN=LOC111462557 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.56e-05
Identity = 32/73 (43.84%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 1   KLIIRQFNKSHHNYQSMFYYDLLKRFLNFDEGPLCYNP----------STHFTTIPGFAK 60
           K  IRQF+K+ H  QS + YD L   LNFDEGP   +P          S  F +IP  AK
Sbjct: 81  KTFIRQFHKNRHR-QSTYRYDPLSYALNFDEGPALDDPFSEDFMRRDFSMRFASIPASAK 140

Query: 61  SSMNFDNDKSSFM 63
           SSM+   D  SF+
Sbjct: 141 SSMDLGKDGPSFI 152

[Close]
BLAST of MC01g0156 vs. ExPASy TrEMBL
Match: A0A6J1JTQ3 (uncharacterized protein LOC111487422 OS=Cucurbita maxima OX=3661 GN=LOC111487422 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 7.06e-05
Identity = 31/73 (42.47%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 1   KLIIRQFNKSHHNYQSMFYYDLLKRFLNFDEGPLCYNP----------STHFTTIPGFAK 60
           K  IRQF+K+ H  QS + YD L   LNFD+GP   +P          S  F +IP  AK
Sbjct: 81  KTFIRQFHKNRHR-QSTYRYDPLSYALNFDDGPALDDPFREDFMRRDFSMRFASIPASAK 140

Query: 61  SSMNFDNDKSSFM 63
           SSM+   D  SF+
Sbjct: 141 SSMDLGKDGPSFI 152

The following BLAST results are available for this feature:
BLAST of MC01g0156 vs.
Match NameE-valueIdentityDescription
BLAST of MC01g0156 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022134303.11.80e-0747.95uncharacterized protein LOC111006597 [Momordica charantia][more]
XP_031741765.11.36e-0546.58uncharacterized protein LOC116403956 [Cucumis sativus] >KGN52385.1 hypothetical ... [more]
XP_038889212.12.65e-0546.58uncharacterized protein LOC120079097 [Benincasa hispida][more]
XP_023533538.15.29e-0543.84uncharacterized protein LOC111795380 [Cucurbita pepo subsp. pepo][more]
KAG6602448.15.29e-0543.84hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of MC01g0156 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C1N08.71e-0847.95uncharacterized protein LOC111006597 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A0A0KRY76.60e-0646.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630870 PE=4 SV=1[more]
A0A6J1HFG42.56e-0543.84uncharacterized protein LOC111462557 OS=Cucurbita moschata OX=3662 GN=LOC1114625... [more]
A0A6J1JTQ37.06e-0542.47uncharacterized protein LOC111487422 OS=Cucurbita maxima OX=3661 GN=LOC111487422... [more]
BLAST of MC01g0156 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g0156.1MC01g0156.1mRNA