MC00g_new0368 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g_new0368
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	leucine-rich repeat extensin-like protein 2
Location	scaffold163: 423552 .. 432765 (-)
RNA-Seq Expression	MC00g_new0368
Synteny	MC00g_new0368

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGAGGTGTCACGAAGATGTGAGCACCATTTAAGTATTTGATTGGAGCGTGAGCAATGAGCGGAGAGTGGGAAAAGGGTAAAGTTGGAGGACAAAGTAAAGCAACGGTCAAAAGATTTGAAATTAAAATCCCCGATTTTGAAAGGATTCCACAGGGCAACTTCAGAAATCTAATCTAATCCCAAAATGCTGAAGGCCGCCAAGAAACTCAAGTTCTGGTCCAAAGACAAGAAGAGAAGAAAGACTCGCGATTCCTCCTATCTTCCTCCTCCGCCGCCGCCGTACTGTTCCTGCTCTTGCTCTTACTCTGCGATCCGGCCCTCTGCTCCGCCGCTGCCGCCCTGGCTAGACGATCGGACTCTTCTCTTGCAATCGGAACCCCCAGCGGCCACCGGAGTTGAAGCGGCGGCGTCGTACCAGCAATACACGGCTCCGAATCCGGTGTACGGATTGCCGATTGTGGAAATGGGTAGCATAAGGACAAGGGAGAGATCTCTGTTCACCGATTTGGGCGCTAGGTTGATTAGGTGCTTCTGTCCATGTCTTCACGTTCGAGAAGCTTATTACCTGCCAGATCAGTGACTCAATCTCAATCTCACTTGAATTTCTCTTTCTGTATGTGATTTACTTTCCCTCTCTTCCATCTCAATTTCTTTATTATCACAAAAGGAAACCATACATGGATTTTAGCCTAAATATATATATATATTTTATACAAGTTTCATTATATATGTTTATTTACTTATTAATTTGGCATGATGTTTTACTTGCGGAAAGAATTTAGAAGTTTGCGTATTTATTAATTTTCAAGTCATGTGGTAAATGTAATTTGTATATGAAACGAGAATACTTACATTGTTCACTTGAAACATAACTCTCGTAACTGCTTTTATTTCATCCAAAAAGTTTAGATAATTATTCTCATCTATATATTATGGATCACCGCCTTTTCTAATCAATCTAATGTGGGACTTTATTATTTCTTAATAAGTCCTCCGAGTTATTTAAATGTGATATACACGCTTGTTTGCTTCAGCGTACTCATGTCAAGGTGTACTAAACACATGTTCAAAAATCAAAACTATGATTCCCGCGGGACAGGCTCTGTTTCAACCACCTATATTGTCTACTCTAAAATTTAATCTTAAAATACACACACTGTAGTTAAATACATGAAGCCCAACTAAGTAAAAGCTAAATCTACCACCGACAAAACTCACAGATAGAAAAATCCATGAAAATTCAAATAAATAGATAAAGGGAAAGAGTGGGGAAACTACGGGTACATACCCAAATCGATGAATTTGAAAAGTTAAAAATAAAAAAATAAATGGAACTCAACTGAATCGATTTTTCAGTTTATGTGAGTGTATGGGTAAATGGCTCAAACAAGCAAATTAGTTGAGAAAAATTGAAAATTACGTAAAACCTCGATCTACGGTCTAGCCTCCGCTCACGTTTTTAGAGAAAATAGTTTTATAAGTAATGAGAGATAAAACAGTGGAAAACATCTTTAAAACAAACCCTGTAGACATCAGGTGCAAAAAGAACTTGATTGCAAGAAGATATACAATGCTTGGTCAGGGGAGGTTTGATGACTACTTGGCCCCCCCATAGTAGGGGTGTTCACGGTTCAAGGGCCAAACTGAATTTGATAAAATGAAAAAATATAAACCGCACCGAATCAAATGTATTATATGAACCGAACCGAAAGTTCGGTTTGGTTCGGTTCGGTTTTGCGGTTTCTCGGCTTTCCAGACCTCTTCCTTATGGGCCCGTCTTTTGGTTCTGACTAGACAATTTTTGGACGGACGCGATGGTGGCGGTGGAGACGAAAATGTGTGATGGCAGTGACAGAGTAGGATATAGTTCGGTTATAGCCTTGAGAAAGAGTTGAGTAAAGAAAGTTGAGGGAAATGAAAAAGAAATGAAAGGGAAGATAAGAAAATTAAAAATTGAAGGGATAGAAAGTAATGGTGAGAAAGAATAAGAGTCCACGAAGAAGAAGAAAAGGGTTGAGGTTTGGAAAATGGAGAAGGAAATGAAAGGCAAAGTTGAAAAGATAGACAAAGTTGAAAGGATAGAAAGTGGAAATCTAAAAACTTAAAACAACCAAATAAAATAAAAAAGAAAAAAGAAGGTAAAAGTTACTTTAGCATTTTCAATTTTAAATTTTAAATTTTGAAATTTAAGATATTTATTAATTATTATTTAGTCTTTAAATAAAAGAAAAAATATAAAAAAATTCTGTCATGTGTGTAGTAACCCAAGGCAAAGGTCAATCTCAGCCATCCCATCCATGTAAGCTGTAAAGTAATTATTATTATTTTTTGAAAAGTGGCAAGTTATTATATATATGCACGTGGTTCGGTTCGGTTCGGTTCGATTTTAGATTTTATTCTAAACTGAAACCCAACCGAATTATTCGGTTTTAAAATTTTAACAAATCGAACTGAACTGAGAAACCGCTAAAATCGATTTTGGATTGGTTCAGTTCAGTTTCATCAGTTTGGCGTTCCCACAACTATGATGAATGCAAGTGCAAGTGTACACTATACTCGTCGCTTGTAGTATGAACGAGGTCGATCCACTGGGACTAAGGATGTTACTTTAAAACATGCGTTCAAGAATACCAAAAATGCAAATAAAAGATAAAAAATGCTTGTATAACTAAACTAAGTAAAATACTATAAAAATGCAGAAATGAAATCCAAGAGATAAATACTGTAATAACATATGCTGGGGCAAAGAAATTCTTTAACACAGAATGCGAATGAGAGGTTAACAGATATCAAAAAGATGGGGAAGATTCAGCATACTTTCACAAGTTATCAACCTACCCTCTAGCTTACTAGTATCTATTAATGCCCAGCTCGACTCGGTTCCCTTCCGAGACACCCCAAACATGAGTAAGTACAACTTCTGTTGCTAAATACCCAAGCAATAAACGCAAGCACTAGGCAAGATTAAGGGACCCCATTCCTGAGTATCCCAAAAGCTATAGAAAAGTGCTAACCACAAATAAAGCAAATCAGCACTCATAAGCTCTCCCGACTCAATAAAAAAGCTAGAAAACACGACAGAGTGACCAAGAATGTCACGCAAGATCGAAGAAATACAAAACAACTTTATTTAAAAATATATGCAGCAGCTAGAGGTTCAGTATCAAGTTAGTTACAACATATAAATCTCCCCAAAATGAAGTTTAATTCATGGAAAAAGGGAAAACAAGATGGGTAAAGGAAAGATACAACATATAAATCTCCCCAAAATGGAGTTTAATTCTAAAGATTGACTATTTCACGGTCTGGTCTTATACAAACTCATTGTATAGGATACCCCCACTCGCATGTCTCCACACGAACGACCTGGATTGAGTTGTCTGTAACCTTTATAGAGTGGGCCGTATCCATAGTGTTGCCAGGATAAGGTACTCAGCCTTATCCATATACTATAGACCCTTTAGGTTATTCACGGGACATTATCCACTTGTATATCAGGGTATATCAAATATATACCTCGTATATAAGAGGTATATCAAATATATACCCAGTACATATACTGACACTAAAATAACCTCGGATGTTTAGTTTATTGGATTTTGGACAATGCAATGCTATGAATTCAACAACAAATTTATTGAATAAAACTTTATTGAATATACATTTGTTTTTACACAAAATACAAACTACGAGTTTAGGGCAACACACCCAACAGATCCATGGGTGGGATAACTCATAATTAGTGTGCAATTCCATATTCGTTCTGATGCACGAGTATTTTTTAGTGAGTCAGTTAGTAGCAAATCTGAGTTTGAGTTTCAGGTAGTCATCAAGACGATGTCGGGTTTAAATGGGAGAGAGTGTTACCATTCAACGTGTGATAAATGGATTTTACCCCATTAGTATGTCATTGAAAATGATGACATGATAAGTGGGAGAGAATGCAACAACAGTACTAGAAGAGAGTATGTTGTGATGCCAACAAAGTGGACAAGTGGTAACAAGATGCATGTGTCGCCCATCGAGTCATCAAGGAGGATGATACATCACCTAACACAACAAAATAATGTGCGTGAGAAAGCCTAGTTAAGGCGCAAGCAAGATTGGAAGCAATGACATGATTAGTTGTGTTAGTGACAAGCTAAGTGAGGGTAGTTAAGGCCCTGGGCCATGACCTAGAAGTAATGGTTTCGTTGAGAGTTTAGATGATCAACTTTGAAGTTAGATGCATATTATTGAGATATGCATGCACACCAAGTTTCATGTCAATCAAAGTTCAAACGTGCGCTCTATGCTGGTGGCCGATTCCTCGCAACTTTGCATGTACAAACATGCCAAGAACAATAATACCTTAGAATGTACTATAGTAGGAGGCATGGTGTTAGCTCTCCACCACCCTTTGATTTTATGGCCTTAGCAAGCTACCCTATGGCACATATATGTGTCATGGCATGGGCGAGAGTTTCAAGACTAAGGTTTTGGGCGTCTTCCTTTGGGAATGAGAATCTCAAGGATAGTGTCGGATGGAACAGGTGTGCTAGCATTATGCCTCGTCCAACGGGTCGGAGGTTGCGACAAGGGGTCGATGTCCAGTACAATATGTTCAAATGACTTGGCACGAGCGCGTGGGTCGTCGTGTCATGATACTGTCTGAATGGATGGATGTTCGGGATAACTTCGATAAAAAGTAAAGGCCAGCGTCTCGATAAACATGCACAAGTAAGAAAGAAATATAAAGTCAGATGACACCTAAATGCTCGGGGTGGCATCGTAAAGCATTTGTTGACTCAATAGTGTCTCGGTTAAAAGGTTAAGATATTCCTTGTCCGATTGCCGGAATAATTATCCCGGGAAGACTTGGTAAGCTCATCAAGCTTGTTATGGCTTAGATATGTGGTAGAAATGGTCTTAGAAGCATTTGATTGACCTGATAAGCTAGTTATGACATGGTCAAGTGGCAAGAATCACCAATTAGAACCTTAAGCCTTATGGTTTAGAGTGTAAGCAAGGCGGTTAGAGACACGAAAGATTTAAAATGCACGTACATGCAGCGTGCATTACGAAGACAAGAAAGTTGCTCAAGTAGTGAAGCTCGATCAAGGAAGAAAGAACCTTACCTAAGGTCCGACGAAGCCACAAAAGGGGCGAAAAGTATATTGAGGCTAGAGTTCATTTTAAGGCTGATCATGATCAAGGTAAGATCATGTCGTCGCACAGTTGAACAAAGTATTATCGTGACATTGCGCACATTGGGCAACGGGCGATAGGCAGCAAATGGTGGAGGAGTAAGAGGTTATTGTTACTGAAAGGAGGAGGATGAGTAAGAGCAAAGGTCTAAAAGATAAACACAGAAGCAAAAGTAAGAACAACCGATTTAGTAATATTGAGAGTTTTCATTGTGGCATAAAAGGACATATGATGGAGAATTGTCTATAACTTAAGAGAAAATAAAAATGATAAAGGTAAGGAAAAGAAGAATGATGATGTTAATGACTCAGATAGATTTGTTGCAGCTACTGATAACTCTCCAAAGGAGAGTTATTCTGGTGTTTATTTTAGTGAAAAAGGTAGTAAAATATCTTAGTGTGTCGATTTCAGGTCATAAATAGCTAGAATAGTGTTAAAATGTGAAATCCTAGCTAAATACCTTTAGTCTTGAGAGCTTTGGACAAAAACAACATAAACTCTCGTATTTTTGGTTCATTTGCACAGGTTTGTAAAGAAGATCCAAAGTAGGAAGCAAGTGTTGAACCAGATAAGAGCAGTCCATGCGTTTTCAAGACAGAGCATGTGAAACCAGAGCAAAGCGGAGCTGGAGCATGGAGTTACTGCACAGTTAAAGTCAAAACACAGGATTTACCTATGTCCGTACAAACCCCAGTTGGGTGCCCTAAAAACGGAACTCGATATTTAAGGGATGTTTTGCCCTAGCCGACAAATACACTGATCCCAAGGGAGACAAATTTGGAGAGCTGAAAAGACAAGAGAAATGAATATCTCCATTTTTGAGGCAACACTTGATTCGGAAAAGAGAAGGGCCACCTGCTTCGACGAGCTGACAGCTTCTTATTCTTTGTGTTTTGTTGCTGCTACCCTGAAATGGGTTGTATTATCTTTTCTTCCATTTTATTTTCTTTACCTATTATGAACTAAACTCCATTTTGGGGGAGGCTCACATGCTGTAACTGATTTAATACTGAACTCTAGTTGCTACATCCGTTTTTAAGTAAAGCTGTATTGTATTTCTTCAATCTTGCGTGACATCGTTGGTCGCTCTGTCGTGTTCGCTAGCTTCTGTATTGACCTGGAAGGGCTTATGGGTGCTGACTTGCTTTACTTGAGATTAGCGTTTTTCTACAGCTTTAGGGATACTCAGGAATGAGGTCCCCTAGTCTTGTTTATAGCTTGCTTTTATTGCTTGGGTATTTAGCAACGGAAGTTGTATTTACTCATGTTTGGGGTGTCTCGAAAGGAAACCGAGTCGAGCTGGCATTAATAGATGTTAGTCAAGCTAGAGGGTAGGTTGATAATTGGTGAAAGCATGCTGAATCTCCCCCGCCTTTCTCATATCAGTTAACTCGTCATTTTCGTTTTCTGTGTTAGAGCTTTTTCTTGTCGTCAGCTTCGATATTGGTTTCTGTTGCGAGCATTTGCTGTCGTGTTGTTATTTTATTTCTTTTAGATAAATTCCATAGACCAAACTCTTTGTATTCTTCTTTGTTGGTATCTACGAGTGTAGTTAAAATATTATCCAAAAATCCATGTGGAATCGACCTCGTTACGTAATACAATCGATGATTTCGTGTATACTTGCACGTGTTGTCAGCACAGTTGTGTGGACTTAACAACTACTGAGGAGTTCCTTATATTATTTTATGGTGATGTTATAAATCTATCTACACAATAGAGTAGTTGAATAGTAGTGCGTCAATTCATGATACATCTAAGAGTGATTCTTTACATCCTACAGATGTGGTGATTTCAACAGTGTTAGGATTGACAATTATGGATTAGGTAAACCCTGTGGTATTGTTGTTGTACGCTTGGAGGCCAAGAATGATACTATGCAGATTTTGAAGAATGTGAAACATATCCCTGATATTTGCATGAATTTAATCTCCACAAGTAAGCTTGATGATGAAGATTTTTTTAAATACCCTCTATGGTGGTAAGTAGAAGTTTACTAAAGGCTCAATGGTTGTAGCTAGGGAGAGAAGTGTTCCTCACTATATTTGATGTAGGCAAATGTTACTGATTCCCATAAGTGTAGTGGATGATGGAAAGATCGTTGAGCTTGGCATAAAAGGCTTAGTCATATTAGTGAGAAGGTCTTAATGATTTTGGCCAAGAAGAATTATTTTTCTGGTATAAAGAATGCACCTTTGAAAACAAGTGCTCATGTCTTAGCAATGAAGCAAACAAGAGTTTCTTTTAAGGCGTTTCAGCACTCAAGGAAGCTAAATATACTTGACTTGGTATATTCTGATGTACGTGGTCTGATGGGAGGTTCCTTATATTTTGTGATATTTATAGATGATCATTCGAGGAAAATATGGTATACGTTGAAATCTAAAGAGTAGATGTTGCAAGTATTTAAATAATTTCATGCTCTTGTTAAAGAGAAATTGGTAAGAAGTCAAAGTACATTGGACCAATAATGGAAGTGAGCATTATGTACCTTTTGATGAGTATTGTAAACGTCATGGTATTCGACATCAAAAGACACCTCCTAAGACTTCTCAGTTAAATGGGCCTAGCTGATAGAATGAACATAACACTAGTTGAACGGGTAAGATGCTTGCTTTCACAGTCACAGTTACTAAGATCTTTCTAAGTGGGAAGCATTGAGTACAGTTTTGCATGTTTTGAATCTCACGCCATGTGTTCCTTTGAGTTTTGAAGTCCCAAATAGAATTTGGTTAGGTAAGGAAATGTCTTATAATCACCTGCGTACATGTTCACAAAGATGATAGATCAAAGCTTGATACAAAGACAAGATCATGTGTGTTCATTGACTATGACCAAGATGAGTTCGGTTAGAGACTGTATGATCCAATACAGAAAATGCTCTTAAGAAGTTGAGATGTTGTATTTGTAGAAGACCATACCATACAAGACATCAAGAAGATATATGAAACAAAGTTTCAACACAGTGATGATTTGATTGACTTGGATTTAGTTCCTTTAACACAACCTTACACACAAACTAAGAATGAGGTTTAAAATGATAAGCTTGATGATACAGATGAGGTAGAGGGTCCATACGAGGTTTAAGTAGATGATGATGTTCATGATCAGTCGTTGAAAACAAAAATTCCAATAGATCTTTCACTTAGGAGATTTGTCAATGCATTGATATCCTGTTAATGAGCATGTATTACTAGCTAAGGGAGGAGAGCCTAAAAGTTATGAGAATGTCATGAAAAATGAGCACAAAAGAGGGTGGACTGATGCAACGAAAGATGAAATGAAGTCATTGCATGGAAACTACAATTTTAAGTTTGTCAAGTTGCCTAAAGAGAAAGTCACACTAAAAAATAAGTGGGTTTATGATAACTCTCAAGAAAAGAGTTATTTTGAATTTATTTTAGTGTAAAGTTGGGTATTAAGGAAGATTTCAACCTTGACTTGCATGTATTTAGAGCTTAAATAATGATATTTTTAGATTCAACCACTTTTCAGCTTTATTTCAAAAAGTTGTAAACATTACATTCATTTGTGGCATTTTGTGCTGGTCCCAGGCTTTGTTATAGCATTGAAGATCTCTGCTAAGTAGCGGCTTTCTCTAGGCGCTTTTATTGTTTGGAAAAATGCAGAGGCGCATGTTGTTGAGTTCCACACAACCACGTGAGTTCAAGTGTAAGTGTACACTATAAATATCGTTTGTAGTGGTAAACAATGTCAAAATTCACAGGGTTTGAGTAAAATACTTCAAAAATACACTTAAGAATACCAATCATACCAAACTTATAATAATGAATGACATTAATTATAAAATAACAAGAAATCATAAACAGAACACAAGTAAATGCAATGTCGATTAAAGGGGAACACTAGTGTTGCCTAAAAACTGAGTTGAATAATTCATGAAGCAATGGAAGTGATGAAAACAAAATCTGGATGATTCGGAAGAATATCGTGTCTGTTTGGCTGTAGTGGATTTTGATGCCAGAGAGCATTAGGTAGTAGCAACAAAGCAATAGAAGTTAAC

mRNA sequence

ATGCTGAAGGCCGCCAAGAAACTCAAGTTCTGGTCCAAAGACAAGAAGAGAAGAAAGACTCGCGATTCCTCCTATCTTCCTCCTCCGCCGCCGCCGTACTGTTCCTGCTCTTGCTCTTACTCTGCGATCCGGCCCTCTGCTCCGCCGCTGCCGCCCTGGCTAGACGATCGGACTCTTCTCTTGCAATCGGAACCCCCAGCGGCCACCGGAGTTGAAGCGGCGGCGTCGTACCAGCAATACACGGCTCCGAATCCGGTGTACGGATTGCCGATTGTGGAAATGGGTAGCATAAGGACAAGGGAGAGATCTCTGTTCACCGATTTGGGCGCTAGGTTGATTAGGTGCTTCTGTCCATGTCTTCACGTTCGAGAAGCTTATTACCTGCCAGATCAGTGA

Coding sequence (CDS)

ATGCTGAAGGCCGCCAAGAAACTCAAGTTCTGGTCCAAAGACAAGAAGAGAAGAAAGACTCGCGATTCCTCCTATCTTCCTCCTCCGCCGCCGCCGTACTGTTCCTGCTCTTGCTCTTACTCTGCGATCCGGCCCTCTGCTCCGCCGCTGCCGCCCTGGCTAGACGATCGGACTCTTCTCTTGCAATCGGAACCCCCAGCGGCCACCGGAGTTGAAGCGGCGGCGTCGTACCAGCAATACACGGCTCCGAATCCGGTGTACGGATTGCCGATTGTGGAAATGGGTAGCATAAGGACAAGGGAGAGATCTCTGTTCACCGATTTGGGCGCTAGGTTGATTAGGTGCTTCTGTCCATGTCTTCACGTTCGAGAAGCTTATTACCTGCCAGATCAGTGA

Protein sequence

MLKAAKKLKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATGVEAAASYQQYTAPNPVYGLPIVEMGSIRTRERSLFTDLGARLIRCFCPCLHVREAYYLPDQ

Homology

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BLAST of MC00g_new0368 vs. NCBI nr
Match: XP_022155153.1 (uncharacterized protein LOC111022295 [Momordica charantia])

HSP 1 Score: 271 bits (694), Expect = 6.00e-92
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MLKAAKKLKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLL 60
           MLKAAKKLKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLL
Sbjct: 1   MLKAAKKLKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLL 60

Query: 61  LQSEPPAATGVEAAASYQQYTAPNPVYGLPIVEMGSIRTRERSLFTDLGARLIRCFCPCL 120
           LQSEPPAATGVEAAASYQQYTAPNPVYGLPIVEMGSIRTRERSLFTDLGARLIRCFCPCL
Sbjct: 61  LQSEPPAATGVEAAASYQQYTAPNPVYGLPIVEMGSIRTRERSLFTDLGARLIRCFCPCL 120

Query: 121 HVREAYYLPDQ 131
           HVREAYYLPDQ
Sbjct: 121 HVREAYYLPDQ 131

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BLAST of MC00g_new0368 vs. NCBI nr
Match: KAG6601672.1 (hypothetical protein SDJN03_06905, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 115 bits (287), Expect = 7.15e-30
Identity = 74/140 (52.86%), Postives = 86/140 (61.43%), Query Frame = 0


Query: 1   MLKAAKK-LKFWSKDKKRRKTRD-SSYLPPPPPPY--CSCSCSYSAIRPSAPPLPPWLDD 60
           MLKAAKK LKFWS+ KKR+K  D + + PPPPPP   C+C CS SAI+PSAPPLPPWLDD
Sbjct: 1   MLKAAKKKLKFWSRSKKRKKIPDPNDFTPPPPPPCHCCTCHCS-SAIQPSAPPLPPWLDD 60

Query: 61  RTLLLQSEPPAA---TGVEAAASYQQYTAPNPVYGLPI-VEMGSIRTRERS-------LF 120
           R       P  A     + AA  YQQY  P+PVYG+PI V+  S R   RS         
Sbjct: 61  RIFPPPEHPEEAEIAAPLVAAPLYQQYMDPDPVYGVPIIVQTDSRRDGSRSRRFAVSGCV 120

Query: 121 TDLGARLIRCFCPCLHVREA 125
            DLG R+I CFCPC    +A
Sbjct: 121 GDLGIRIIGCFCPCFRTPKA 139

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BLAST of MC00g_new0368 vs. NCBI nr
Match: KAE8007888.1 (hypothetical protein FH972_004447 [Carpinus fangiana])

HSP 1 Score: 107 bits (268), Expect = 1.04e-26
Identity = 68/162 (41.98%), Postives = 86/162 (53.09%), Query Frame = 0


Query: 1   MLKAAKKLKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLD----- 60
           M+KA KKLKFWS+ K+++KT+D  YLPPPP   C C  S  + +PSAPPLPPWLD     
Sbjct: 3   MMKAVKKLKFWSRKKRKKKTQDPYYLPPPP---CHCYHSCYSTQPSAPPLPPWLDLEQTH 62

Query: 61  -------------DRTLLLQSEPPAATGV-------------EAAAS---YQQYTAPNPV 120
                        D +   Q+  P+   V             +AA S   YQQY APNPV
Sbjct: 63  DQAIPEPALQPVPDLSYPNQARVPSIQEVVTETSPIMYPTLPDAAVSTPSYQQYMAPNPV 122

Query: 121 YGLPIVEMGSIRTRERSLF----TDLGARLIRCFCPCLHVRE 124
           YG+P+V   + R   R+ F     + G  L RCFCPCL +RE
Sbjct: 123 YGIPVVVGETARRERRAGFFGCVVNFGIHLFRCFCPCLSIRE 161

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BLAST of MC00g_new0368 vs. NCBI nr
Match: XP_022933064.1 (uncharacterized protein LOC111439771 [Cucurbita moschata])

HSP 1 Score: 105 bits (261), Expect = 5.51e-26
Identity = 69/137 (50.36%), Postives = 81/137 (59.12%), Query Frame = 0


Query: 1   MLKAAKK-LKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTL 60
           MLKAAKK LKFWS+ KKR+K  + +  PPP    C+C CS SAI+PSAPPLPPWLDDR  
Sbjct: 1   MLKAAKKKLKFWSRSKKRKKIPNPNDFPPPCH-CCTCHCS-SAIQPSAPPLPPWLDDRIF 60

Query: 61  LLQSEPPAA---TGVEAAASYQQYTAPNPVYGLPI-VEMGSIRTRERS-------LFTDL 120
                P  A     + AA  YQ Y  P+PVYG+PI V+  S R   RS          +L
Sbjct: 61  PPSEHPEEAEIAAPLVAAPLYQHYMDPDPVYGVPIIVQTDSRRDGSRSRRFAVSGCVGEL 120

Query: 121 GARLIRCFCPCLHVREA 125
           G R+I CFCPC    EA
Sbjct: 121 GIRIIGCFCPCFRTPEA 135

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BLAST of MC00g_new0368 vs. NCBI nr
Match: XP_002527837.1 (uncharacterized protein LOC8262569 [Ricinus communis] >EEF34540.1 conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 105 bits (262), Expect = 7.96e-26
Identity = 65/163 (39.88%), Postives = 83/163 (50.92%), Query Frame = 0


Query: 1   MLKAAKKL-KFWSKDKKRRKTRDSSY--LPPPPPPYCSCSCSYSA-IRPSAPPLPPWLDD 60
           M+KAAKKL K W + KKR+KT    Y  LPPP    C C CSYS  ++PSAPPLPPWL+ 
Sbjct: 1   MIKAAKKLRKLWPRKKKRKKTYQEPYYFLPPPS---CHCCCSYSTPVQPSAPPLPPWLES 60

Query: 61  ----------------------------RTLLLQSEP----PAATGVEAAASYQQYTAPN 120
                                       + ++++++     P     +   +YQQY  PN
Sbjct: 61  AQTHEAISSTEVQQLPEEGYQSQFQFPSQEIVVETDTNAIYPTLPNTDTPLTYQQYAVPN 120

Query: 121 PVYGLPIVEMGSIRTRERSLF---TDLGARLIRCFCPCLHVRE 124
           PVYG+P+VE    R R    F      GA LIRCFCPC H+RE
Sbjct: 121 PVYGVPVVEQTPRRERSAGFFGCFVKFGANLIRCFCPCFHIRE 160

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BLAST of MC00g_new0368 vs. ExPASy TrEMBL
Match: A0A6J1DM77 (uncharacterized protein LOC111022295 OS=Momordica charantia OX=3673 GN=LOC111022295 PE=4 SV=1)

HSP 1 Score: 271 bits (694), Expect = 2.90e-92
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MLKAAKKLKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLL 60
           MLKAAKKLKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLL
Sbjct: 1   MLKAAKKLKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLL 60

Query: 61  LQSEPPAATGVEAAASYQQYTAPNPVYGLPIVEMGSIRTRERSLFTDLGARLIRCFCPCL 120
           LQSEPPAATGVEAAASYQQYTAPNPVYGLPIVEMGSIRTRERSLFTDLGARLIRCFCPCL
Sbjct: 61  LQSEPPAATGVEAAASYQQYTAPNPVYGLPIVEMGSIRTRERSLFTDLGARLIRCFCPCL 120

Query: 121 HVREAYYLPDQ 131
           HVREAYYLPDQ
Sbjct: 121 HVREAYYLPDQ 131

[Close]

BLAST of MC00g_new0368 vs. ExPASy TrEMBL
Match: A0A5N6QN08 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004447 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 5.06e-27
Identity = 68/162 (41.98%), Postives = 86/162 (53.09%), Query Frame = 0


Query: 1   MLKAAKKLKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLD----- 60
           M+KA KKLKFWS+ K+++KT+D  YLPPPP   C C  S  + +PSAPPLPPWLD     
Sbjct: 3   MMKAVKKLKFWSRKKRKKKTQDPYYLPPPP---CHCYHSCYSTQPSAPPLPPWLDLEQTH 62

Query: 61  -------------DRTLLLQSEPPAATGV-------------EAAAS---YQQYTAPNPV 120
                        D +   Q+  P+   V             +AA S   YQQY APNPV
Sbjct: 63  DQAIPEPALQPVPDLSYPNQARVPSIQEVVTETSPIMYPTLPDAAVSTPSYQQYMAPNPV 122

Query: 121 YGLPIVEMGSIRTRERSLF----TDLGARLIRCFCPCLHVRE 124
           YG+P+V   + R   R+ F     + G  L RCFCPCL +RE
Sbjct: 123 YGIPVVVGETARRERRAGFFGCVVNFGIHLFRCFCPCLSIRE 161

[Close]

BLAST of MC00g_new0368 vs. ExPASy TrEMBL
Match: A0A6J1EYP6 (uncharacterized protein LOC111439771 OS=Cucurbita moschata OX=3662 GN=LOC111439771 PE=4 SV=1)

HSP 1 Score: 105 bits (261), Expect = 2.67e-26
Identity = 69/137 (50.36%), Postives = 81/137 (59.12%), Query Frame = 0


Query: 1   MLKAAKK-LKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTL 60
           MLKAAKK LKFWS+ KKR+K  + +  PPP    C+C CS SAI+PSAPPLPPWLDDR  
Sbjct: 1   MLKAAKKKLKFWSRSKKRKKIPNPNDFPPPCH-CCTCHCS-SAIQPSAPPLPPWLDDRIF 60

Query: 61  LLQSEPPAA---TGVEAAASYQQYTAPNPVYGLPI-VEMGSIRTRERS-------LFTDL 120
                P  A     + AA  YQ Y  P+PVYG+PI V+  S R   RS          +L
Sbjct: 61  PPSEHPEEAEIAAPLVAAPLYQHYMDPDPVYGVPIIVQTDSRRDGSRSRRFAVSGCVGEL 120

Query: 121 GARLIRCFCPCLHVREA 125
           G R+I CFCPC    EA
Sbjct: 121 GIRIIGCFCPCFRTPEA 135

[Close]

BLAST of MC00g_new0368 vs. ExPASy TrEMBL
Match: B9SPB8 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0496640 PE=4 SV=1)

HSP 1 Score: 105 bits (262), Expect = 3.85e-26
Identity = 65/163 (39.88%), Postives = 83/163 (50.92%), Query Frame = 0


Query: 1   MLKAAKKL-KFWSKDKKRRKTRDSSY--LPPPPPPYCSCSCSYSA-IRPSAPPLPPWLDD 60
           M+KAAKKL K W + KKR+KT    Y  LPPP    C C CSYS  ++PSAPPLPPWL+ 
Sbjct: 1   MIKAAKKLRKLWPRKKKRKKTYQEPYYFLPPPS---CHCCCSYSTPVQPSAPPLPPWLES 60

Query: 61  ----------------------------RTLLLQSEP----PAATGVEAAASYQQYTAPN 120
                                       + ++++++     P     +   +YQQY  PN
Sbjct: 61  AQTHEAISSTEVQQLPEEGYQSQFQFPSQEIVVETDTNAIYPTLPNTDTPLTYQQYAVPN 120

Query: 121 PVYGLPIVEMGSIRTRERSLF---TDLGARLIRCFCPCLHVRE 124
           PVYG+P+VE    R R    F      GA LIRCFCPC H+RE
Sbjct: 121 PVYGVPVVEQTPRRERSAGFFGCFVKFGANLIRCFCPCFHIRE 160

[Close]

BLAST of MC00g_new0368 vs. ExPASy TrEMBL
Match: A0A6P4PX64 (uncharacterized protein LOC108483150 OS=Gossypium arboreum OX=29729 GN=LOC108483150 PE=4 SV=1)

HSP 1 Score: 103 bits (257), Expect = 3.16e-25
Identity = 69/164 (42.07%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 1   MLKAAKKLKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCS-------------YSAIRPSA 60
           M KA KKLKFWS+ K++RK +  +    P P +C C CS             YS ++PSA
Sbjct: 1   MFKAVKKLKFWSRKKRKRKRKSLA----PQPSHCICHCSHSTSPHYYQCNYPYSPLQPSA 60

Query: 61  PPLPPWL------DDRTLLLQSEPP----------------AATGVEAAA--SYQQYTAP 120
           PPLPPWL      D+   L Q+E                  +AT + AAA  SYQQY   
Sbjct: 61  PPLPPWLQAELTQDEFPTLEQAEAEPFPEFSHPTDLVQDIESATMIPAAAGPSYQQYMVS 120

Query: 121 NPVYGLPIVEMGSIRTRERSLF---TDLGARLIRCFCPCLHVRE 124
           NPVYG P+V+    R R    F    D+  RLIRCFCPC+HVRE
Sbjct: 121 NPVYGPPVVQQTGRRERSGGYFGCIIDISLRLIRCFCPCVHVRE 160

[Close]

BLAST of MC00g_new0368 vs. TAIR 10
Match: AT4G24265.1 (unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08
Identity = 48/145 (33.10%), Postives = 64/145 (44.14%), Query Frame = 0


Query: 6   KKLKFWSKDKKRRKTRDSSYLPPPPPPYCSCSCSYSA----IRPSAPPLPPWLDDRTLLL 65
           KKL FWS+ K++RK        P  P +CSC  S +A    + P+APPLP W D+   L 
Sbjct: 2   KKLTFWSRKKRKRK-----QACPSQPHHCSCEYSSTAVAVLVEPTAPPLPYWFDETRSLC 61

Query: 66  QSEPPA-------------ATGVEAA------------ASYQQYTAPNPVYGLPIVEMGS 119
             E  +              T VEA              SYQQY  PNP   +  VE  +
Sbjct: 62  PPETSSFPWTTHHLPHQQEETIVEATPLLSQVSDLRIYQSYQQYMVPNPTSNVHFVEPAT 121

The following BLAST results are available for this feature:

BLAST of MC00g_new0368 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g_new0368 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155153.1	6.00e-92	100.00	uncharacterized protein LOC111022295 [Momordica charantia]	[more]
KAG6601672.1	7.15e-30	52.86	hypothetical protein SDJN03_06905, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8007888.1	1.04e-26	41.98	hypothetical protein FH972_004447 [Carpinus fangiana]	[more]
XP_022933064.1	5.51e-26	50.36	uncharacterized protein LOC111439771 [Cucurbita moschata]	[more]
XP_002527837.1	7.96e-26	39.88	uncharacterized protein LOC8262569 [Ricinus communis] >EEF34540.1 conserved hypo...	[more]

BLAST of MC00g_new0368 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DM77	2.90e-92	100.00	uncharacterized protein LOC111022295 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A5N6QN08	5.06e-27	41.98	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004447 PE=4 SV=1	[more]
A0A6J1EYP6	2.67e-26	50.36	uncharacterized protein LOC111439771 OS=Cucurbita moschata OX=3662 GN=LOC1114397...	[more]
B9SPB8	3.85e-26	39.88	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0496640 PE=4 SV=1	[more]
A0A6P4PX64	3.16e-25	42.07	uncharacterized protein LOC108483150 OS=Gossypium arboreum OX=29729 GN=LOC108483...	[more]

BLAST of MC00g_new0368 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24265.1	1.0e-08	33.10	unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacter...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g_new0368.1	MC00g_new0368.1	mRNA