MC00g_new0363 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g_new0363
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Transpos_assoc domain-containing protein
Location	scaffold163: 307609 .. 311088 (-)
RNA-Seq Expression	MC00g_new0363
Synteny	MC00g_new0363

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAAGGAGAGAAAAGAAAACAAAACAAAACTAAAGAAACCCTAAACACATCTTTTCCTCCCCATCTTTTTCCCTTTCTTATTCTTCTTTCTTCTCCTTCTTCCCCTTCCTAACCCTAGTCGCCGCCCTCCCCCTCCCGTTCTTCGACGATCAACCCCTTCTCGTTCTCCGACGACGCAACAGTGCGGCGGAGGCGGCGATATTCGATAGTGCAACGGCGATATTCGACAGTGCAGCGGCGGCAGGCTTCGACAGCGCGGCAGCGGCGGTCTTCGACAGCAGCAGCAGCACCTCCGGCGGTCTTCGACAGTAGCGGCGATACGTTCATCTCGGCGTCCCTTAGCAACACGAATCTGCGGTCGCCGACGTGGGTATCTAGCAACAGCGGTCGGCGCACAAAACCACCGGCGGTAACAGTGGTGTTTTAGATCCCGCGACCACGATTCGTAAAGCAACAGCAGTGGCAACTACAAACAGCCCGAATCCGACGACTCCATGCCCCAATTTGCTTGTTTTGAGTTACCCATCCCCTTCGTATTGGTTTGATGTTGACCCACTCCTATCTGGACCCAAATTGACGTTACCCACCCACTTTGGCACTGACCCACTACTAACCCAAGTGTTTTTAGGGTGAGTTAATAGGTAACGACTCACCTAACTTTAGTTTCGGTTCAATTTAAGTGGTTTTAGTTAGTTTCTAACCTAAGTTTATTTGCTTTGATTTAGGAACACTTCAGTGAGTTTAGTAGCGCGTTAGGAATTTGTATGTTTTAACTCTTTATGCATGTTGGATATGTTTATGGATTATACTGACAATTATACTCTTGGATTGTTTGTCAATTATACTCTTGCATTGTTTGTCAATTATACTCTTGGATTGTTGTGTTTATGAAAACATACTGAGTTTAGTGAGATTTGTTATATTGTGAAAGCATATCCGTATATTGTTTCGTGATAAGTATATTGTCTGACACTTTTTTATTTTTAAATTTAAATGACAAACAAAAACGAAAGGTTTTCTTCTGTTCCATTATATATTATATGTTATATATTATACAATCTATTTTTTATGGGTGGATTTAGAATTATTTATTTTCATCGGAAAAGTTAGTCACCACATGGTTAGGTAGTGTGTTTGGATGTCCCATAGGTTTATGATAAAGTTAATGAAATCTTTTATCAAATTTCAACAGGATTGAACTTTAAAAGTGCTAAAAACTTTATCGCAAATTACTTTTAATAGTATAATTGGAAGATGGATAGAGATTGGATTAAGCTAAGAGATAGGTTTTCAAGAGGGTATGTATGTTGAAGAGGTTTTAAAATTTATAGAGGTTACCAAATTTCATGTTAACGAGTTGGGAAAAACGAGATGTCTGTGCAAAAAATGTCAAAATGTATTATGGCAACTACTGGATGTAGTGGAACAACACTTATTCATTAATGGGATATCTCCTACTTATAGTCAATGGATACATCACGGAGACCCTTTGAACTTAGATCGATATTCAAGTGACACACCGTCGTCCCATGATGACTTAAGTAGAGAGTGTAATGTTACCAGAGAAGAAAATGAGGTGTTCGATATGCTAAACGAAATGAGAGGTCCAATGATAGAAGAGGATGAAAACGTAGAAGATTTTGTATATGAGATGCCGGCACAGGGTTTTGAAAGAGACAATTCGAATGAGTTTGAGGATTTGATGAACGAAGTAAGTCAAGAATTGTACCCTAGTTGTACACAAGTTACCTCATTGGAATTTTTGATCAAGTTGATGCATATCAAAGTGCTTAATAAGTGAAGTAATACATCATTAGATATGTTACTCCAATTATTGAAGGTATAGTTTGCTACTTAATCTAACTTTGTAATCTTGATGATGTTTTGAGTCATACGTTGTCGTAGGTATGCTGGGAACTAGTCAAGAATTGGCCGGTGATATATTCGAGGATGCACAACGGGATGAAGAGTTTGGAGATGGACCTGAAGAAGACGCCTCCCGTTAGTATTTCATAACTATTTTGTGGTGTGTTAGTACTTCATAAATATTGACTTAACCAAATTATTTTCTGCAGGTAACACCGGTCGATTGGGTGTACAGATGCATACTCGTTATGTTGACTTAGACAAGGAGGTGACAAAAAATGGGAGAATCAAAATTGTTATTGACGAGAACCATGATAAGCTAGTATGTGCAAATGCTACACGGTTCTCGAATACTATAGGCTCTGTTGTTAGAGAAAATATTAGTCCGGTGGAGTACACGAAGTGGAATGAGGTACTAGAGGAAATGATAGGAAAAGCCATCAAACGCGTAATTGTAAGCAATAATATTTTTACTCAATTCATTAAAATGATACAACATATATATGTTTATTAATTATAATGTTATCGTTTCAAAACTGGTTCGACGTGAACATCTCAGAGGCAAAGATGAATAAATTCGTCTTTAAGCATATTCAATTGACATTTAAGAAGTATCGGGCAGAATTGTAGCCACATCGACGAATTGAGAAGCTAGATGATTGGTACAGGTCGTGCGATAAATGGGAAACTCCTGAATGGAAGGTACGCTCCCATTTTTCCATATTACAACTTTAAGTAACATGTTAGATTGTGTATTGATCGCCAATTGTTTTTTTTTCATAATTAAGGAAAAATCAGAGACAAACAAAACGAGTAGGTCAAAGGTCACTTACAATCATCGGGTCGGGTCTAAAACATTCGACCGTATGCAACAAGAACTGGTAATATTGACAATTACACGTATTATTACTGTATGTTCTGCACTGACAGATGAAATTCATGTGAAATGTAGAAAGACAAACTTGGCGTGGAGATCGGTCCCGTCCAAATGTTTAAAGAGACGAGATATAATCCTGAAAAAGGATGGGTAAACCCCATGTCGAAATAACATATGTAAGTTTTAGTTTGTTAATTATACATTACGAGTATATGAAATTACAGTATTGCTTCACAGTGCATGACTCATTTGTGCAGAAAGCGTCAGAAGACATGAGGGATGCATCTGTACCAGAAGGGACCGATCCGCCAACAGAAGCAGATTGTTGTCGAACTGTATTCGGTCCTCGTTCCAGATTCGTCTGAAGCATGGGGTTGGGCCCAGCACCAGGAGGAAAAGAGGAAGCTCATCCAACAATCCAAGAGTCATGGAGGAACTAAATGCGACGAAAGACGAATTGAGGGAGACTAAAGAACGATTGGACAATACCGAAAATCGCTTAAGTCGAATTGAAGAATGTTTAGCCAAAAATCTACGAGAGTTCAATAACCTTAAAAACTTATTCGAAAGTTTCATGAGTCAATCCTCAGGCGGCTCATTCCCTATGTCTGAATAGGCATAAAGCATTTACTTAGGTTTTTGTAGCTTTTGAAATATATTGAACGTGTAATTTCAAGAATCTTTGGAACACGTGAACTTTGATGATATTTTGGTACTTGATATTTTGGTTTATG

mRNA sequence

ATGTATGTTGAAGAGGTTTTAAAATTTATAGAGGTTACCAAATTTCATGTTAACGAGTTGGGAAAAACGAGATGTCTGTGCAAAAAATGTCAAAATGTATTATGGCAACTACTGGATGTAGTGGAACAACACTTATTCATTAATGGGATATCTCCTACTTATAGTCAATGGATACATCACGGAGACCCTTTGAACTTAGATCGATATTCAAGTGACACACCGTCGTCCCATGATGACTTAAGTAGAGAGTGTAATGTTACCAGAGAAGAAAATGAGGTGTTCGATATGCTAAACGAAATGAGAGGTCCAATGATAGAAGAGGATGAAAACGTAGAAGATTTTGTATATGAGATGCCGGCACAGGGTTTTGAAAGAGACAATTCGAATGAGTTTGAGGATTTGATGAACGAAGTAAGTCAAGAATTGTACCCTAGTTGTACACAAGTTACCTCATTGGAATTTTTGATCAAGTTGATGCATATCAAAGTGCTTAATAAGTGA

Coding sequence (CDS)

ATGTATGTTGAAGAGGTTTTAAAATTTATAGAGGTTACCAAATTTCATGTTAACGAGTTGGGAAAAACGAGATGTCTGTGCAAAAAATGTCAAAATGTATTATGGCAACTACTGGATGTAGTGGAACAACACTTATTCATTAATGGGATATCTCCTACTTATAGTCAATGGATACATCACGGAGACCCTTTGAACTTAGATCGATATTCAAGTGACACACCGTCGTCCCATGATGACTTAAGTAGAGAGTGTAATGTTACCAGAGAAGAAAATGAGGTGTTCGATATGCTAAACGAAATGAGAGGTCCAATGATAGAAGAGGATGAAAACGTAGAAGATTTTGTATATGAGATGCCGGCACAGGGTTTTGAAAGAGACAATTCGAATGAGTTTGAGGATTTGATGAACGAAGTAAGTCAAGAATTGTACCCTAGTTGTACACAAGTTACCTCATTGGAATTTTTGATCAAGTTGATGCATATCAAAGTGCTTAATAAGTGA

Protein sequence

MYVEEVLKFIEVTKFHVNELGKTRCLCKKCQNVLWQLLDVVEQHLFINGISPTYSQWIHHGDPLNLDRYSSDTPSSHDDLSRECNVTREENEVFDMLNEMRGPMIEEDENVEDFVYEMPAQGFERDNSNEFEDLMNEVSQELYPSCTQVTSLEFLIKLMHIKVLNK

Homology

[Close]

BLAST of MC00g_new0363 vs. NCBI nr
Match: XP_038890872.1 (uncharacterized protein LOC120080309 [Benincasa hispida])

HSP 1 Score: 152 bits (383), Expect = 6.42e-43
Identity = 79/159 (49.69%), Postives = 113/159 (71.07%), Query Frame = 0


Query: 11  EVTKFHVNELGKTRCLCKKCQNVLWQLLDVVEQHLFINGISPTYSQWIHHGDPLNLDRYS 70
           +V K  +NE+GKTRC CK CQ  + Q LD +E HLF+NG+SP+Y+QW++HG+P NL R+ 
Sbjct: 6   KVAKCPLNEVGKTRCPCKHCQISMSQSLDRIECHLFMNGMSPSYTQWVYHGEPANLARFQ 65

Query: 71  SDTPSSHDD-LSRECNVTREENEVFDMLNEMRGPMIEEDENV---EDFVYEMPAQGFERD 130
           ++  SS DD +SRE NV  +++E+F +LN+++G MI+ + +V   EDF   MP    ERD
Sbjct: 66  TNISSSIDDRVSREFNVEHDDDEMFGLLNDLQGSMIKGEGDVDDEEDFKDGMPTNTEERD 125

Query: 131 NSNEFEDLMNEVSQELYPSCTQVTSLEFLIKLMHIKVLN 165
           NSN FE+L+ E   + YP C + + L FL++LMHIKVLN
Sbjct: 126 NSNIFEELIAEARNQFYPGCAKFSLLNFLVRLMHIKVLN 164

[Close]

BLAST of MC00g_new0363 vs. NCBI nr
Match: XP_008455800.1 (PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo] >KAA0025951.1 CACTA transposable element [Cucumis melo var. makuwa])

HSP 1 Score: 155 bits (392), Expect = 3.73e-42
Identity = 81/160 (50.62%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 10  IEVTKFHVNELGKTRCLCKKCQNVLWQLLDVVEQHLFINGISPTYSQWIHHGDPLNLDRY 69
           +EV K HVN++GKTRC CK CQN + Q LDVVE+HLF  GIS  Y++W++HG+  NL R+
Sbjct: 6   LEVAKCHVNDVGKTRCPCKYCQNSMTQTLDVVERHLFTYGISSVYNKWVYHGEATNLARF 65

Query: 70  SSDTPSSHDD-LSRECNVTREENEVFDMLNEMRGPMIEEDENVED---FVYEMPAQGFER 129
                SS  + LSRE N+  E++++ D+L +++G MI  +EN +D   F  E+P    E 
Sbjct: 66  ERGASSSEGERLSRESNIGDEDDDILDLLTDLQGSMIAREENFDDGDGFDDEVPEDVDEI 125

Query: 130 DNSNEFEDLMNEVSQELYPSCTQVTSLEFLIKLMHIKVLN 165
           + SN FE+LMNE    LYP CT+ +SL FL+KLMHIKVLN
Sbjct: 126 NTSNVFEELMNEARNPLYPGCTKFSSLNFLVKLMHIKVLN 165

[Close]

BLAST of MC00g_new0363 vs. NCBI nr
Match: KAA0050152.1 (uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK06408.1 uncharacterized protein E5676_scaffold163G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 148 bits (373), Expect = 1.09e-37
Identity = 79/165 (47.88%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 2   YVEEVLKFIEVTKFHVNELGKTRCLCKKCQNVLWQLLDVVEQHLFINGISPTYSQWIHHG 61
           Y E V +F+EV K HVN+ G+TRC CKKC N +W+ L+ VE+HL   GISP+Y  WI+HG
Sbjct: 242 YREGVSQFLEVAKLHVNDSGRTRCPCKKCMNSMWESLEGVERHLLTVGISPSYVNWIYHG 301

Query: 62  DPLNLDRYSSDTPSS-HDDLSRECNVTREENEVFDMLNEMRGPMIEEDENVEDFVYEMPA 121
           + +NL R      +  H D     N+  E+NE+ D+LN+++ P+  E+E  E F  EMP 
Sbjct: 302 ERVNLPRGLERVATHLHHDDEGTSNLF-EQNEMLDLLNDLQVPIENEEETEEAFENEMPF 361

Query: 122 QGFERDNSNEFEDLMNEVSQELYPSCTQVTSLEFLIKLMHIKVLN 165
              ++D ++ FEDLMNE   ELYP C++ +SL FL+KLM IKVLN
Sbjct: 362 DDDQQDTTSLFEDLMNEARNELYPGCSKFSSLNFLVKLMRIKVLN 405

[Close]

BLAST of MC00g_new0363 vs. NCBI nr
Match: TYK18968.1 (uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (319), Expect = 1.90e-30
Identity = 70/172 (40.70%), Postives = 105/172 (61.05%), Query Frame = 0


Query: 6   VLKFIEVTKFHVNELGKTRCLCKKCQNVLWQLLDVVEQHLFINGISPTYSQWIHHGDPL- 65
           V +F+E  KFHV+  G+ RC CK+C N+ W  L+ VE+HL   GISP Y++W++HG+ L 
Sbjct: 94  VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYTEWVYHGESLS 153

Query: 66  -----NLDRYSSDTPSSHDDLSRECNVTREENEVFDMLNEMRGPMIEEDENVEDFVYEMP 125
                N +  +S  P +    S + N   EE ++F MLN+++ P IE +E +E+F  E  
Sbjct: 154 YRGTENFEEGTSSNPFNEGTSSTQFN---EEGDIFGMLNDLQAP-IEHEEEIEEFRLEDE 213

Query: 126 AQ-----GFERDNSNE-FEDLMNEVSQELYPSCTQVTSLEFLIKLMHIKVLN 165
                    + D +N  F+DL+N+   ELYP C++ +SL FL+KLMH+KVLN
Sbjct: 214 MAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLVKLMHVKVLN 261

[Close]

BLAST of MC00g_new0363 vs. NCBI nr
Match: KAA0056368.1 (uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 126 bits (317), Expect = 3.61e-30
Identity = 71/176 (40.34%), Postives = 105/176 (59.66%), Query Frame = 0


Query: 2   YVEEVLKFIEVTKFHVNELGKTRCLCKKCQNVLWQLLDVVEQHLFINGISPTYSQWIHHG 61
           Y   V +F+E  KFHV+  G+ RC CK+C N+ W  L+ VE+HL   GISP Y +W++HG
Sbjct: 16  YRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYIEWVYHG 75

Query: 62  DPL------NLDRYSSDTPSSHDDLSRECNVTREENEVFDMLNEMRGPMIEEDENVEDFV 121
           + L      N +  +S  P +    S + N   EE ++F MLN+++ P IE +E +E+F 
Sbjct: 76  ESLSYRGTENFEEGTSSNPFNEGTSSTQFN---EEGDIFGMLNDLQAP-IEHEEEIEEFR 135

Query: 122 YEMPAQ-----GFERDNSNE-FEDLMNEVSQELYPSCTQVTSLEFLIKLMHIKVLN 165
            E           + D +N  F+DL+N+   ELYP C++ +SL FL+KLMH+KVLN
Sbjct: 136 LEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLVKLMHVKVLN 187

[Close]

BLAST of MC00g_new0363 vs. ExPASy TrEMBL
Match: A0A5A7SP00 (CACTA transposable element OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002580 PE=4 SV=1)

HSP 1 Score: 155 bits (392), Expect = 1.80e-42
Identity = 81/160 (50.62%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 10  IEVTKFHVNELGKTRCLCKKCQNVLWQLLDVVEQHLFINGISPTYSQWIHHGDPLNLDRY 69
           +EV K HVN++GKTRC CK CQN + Q LDVVE+HLF  GIS  Y++W++HG+  NL R+
Sbjct: 6   LEVAKCHVNDVGKTRCPCKYCQNSMTQTLDVVERHLFTYGISSVYNKWVYHGEATNLARF 65

Query: 70  SSDTPSSHDD-LSRECNVTREENEVFDMLNEMRGPMIEEDENVED---FVYEMPAQGFER 129
                SS  + LSRE N+  E++++ D+L +++G MI  +EN +D   F  E+P    E 
Sbjct: 66  ERGASSSEGERLSRESNIGDEDDDILDLLTDLQGSMIAREENFDDGDGFDDEVPEDVDEI 125

Query: 130 DNSNEFEDLMNEVSQELYPSCTQVTSLEFLIKLMHIKVLN 165
           + SN FE+LMNE    LYP CT+ +SL FL+KLMHIKVLN
Sbjct: 126 NTSNVFEELMNEARNPLYPGCTKFSSLNFLVKLMHIKVLN 165

[Close]

BLAST of MC00g_new0363 vs. ExPASy TrEMBL
Match: A0A1S3C1V3 (uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=4 SV=1)

HSP 1 Score: 155 bits (392), Expect = 1.80e-42
Identity = 81/160 (50.62%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 10  IEVTKFHVNELGKTRCLCKKCQNVLWQLLDVVEQHLFINGISPTYSQWIHHGDPLNLDRY 69
           +EV K HVN++GKTRC CK CQN + Q LDVVE+HLF  GIS  Y++W++HG+  NL R+
Sbjct: 6   LEVAKCHVNDVGKTRCPCKYCQNSMTQTLDVVERHLFTYGISSVYNKWVYHGEATNLARF 65

Query: 70  SSDTPSSHDD-LSRECNVTREENEVFDMLNEMRGPMIEEDENVED---FVYEMPAQGFER 129
                SS  + LSRE N+  E++++ D+L +++G MI  +EN +D   F  E+P    E 
Sbjct: 66  ERGASSSEGERLSRESNIGDEDDDILDLLTDLQGSMIAREENFDDGDGFDDEVPEDVDEI 125

Query: 130 DNSNEFEDLMNEVSQELYPSCTQVTSLEFLIKLMHIKVLN 165
           + SN FE+LMNE    LYP CT+ +SL FL+KLMHIKVLN
Sbjct: 126 NTSNVFEELMNEARNPLYPGCTKFSSLNFLVKLMHIKVLN 165

[Close]

BLAST of MC00g_new0363 vs. ExPASy TrEMBL
Match: A0A5D3C5I5 (Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001090 PE=4 SV=1)

HSP 1 Score: 148 bits (373), Expect = 5.26e-38
Identity = 79/165 (47.88%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 2   YVEEVLKFIEVTKFHVNELGKTRCLCKKCQNVLWQLLDVVEQHLFINGISPTYSQWIHHG 61
           Y E V +F+EV K HVN+ G+TRC CKKC N +W+ L+ VE+HL   GISP+Y  WI+HG
Sbjct: 242 YREGVSQFLEVAKLHVNDSGRTRCPCKKCMNSMWESLEGVERHLLTVGISPSYVNWIYHG 301

Query: 62  DPLNLDRYSSDTPSS-HDDLSRECNVTREENEVFDMLNEMRGPMIEEDENVEDFVYEMPA 121
           + +NL R      +  H D     N+  E+NE+ D+LN+++ P+  E+E  E F  EMP 
Sbjct: 302 ERVNLPRGLERVATHLHHDDEGTSNLF-EQNEMLDLLNDLQVPIENEEETEEAFENEMPF 361

Query: 122 QGFERDNSNEFEDLMNEVSQELYPSCTQVTSLEFLIKLMHIKVLN 165
              ++D ++ FEDLMNE   ELYP C++ +SL FL+KLM IKVLN
Sbjct: 362 DDDQQDTTSLFEDLMNEARNELYPGCSKFSSLNFLVKLMRIKVLN 405

[Close]

BLAST of MC00g_new0363 vs. ExPASy TrEMBL
Match: A0A5D3D5X7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00580 PE=4 SV=1)

HSP 1 Score: 127 bits (319), Expect = 9.19e-31
Identity = 70/172 (40.70%), Postives = 105/172 (61.05%), Query Frame = 0


Query: 6   VLKFIEVTKFHVNELGKTRCLCKKCQNVLWQLLDVVEQHLFINGISPTYSQWIHHGDPL- 65
           V +F+E  KFHV+  G+ RC CK+C N+ W  L+ VE+HL   GISP Y++W++HG+ L 
Sbjct: 94  VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYTEWVYHGESLS 153

Query: 66  -----NLDRYSSDTPSSHDDLSRECNVTREENEVFDMLNEMRGPMIEEDENVEDFVYEMP 125
                N +  +S  P +    S + N   EE ++F MLN+++ P IE +E +E+F  E  
Sbjct: 154 YRGTENFEEGTSSNPFNEGTSSTQFN---EEGDIFGMLNDLQAP-IEHEEEIEEFRLEDE 213

Query: 126 AQ-----GFERDNSNE-FEDLMNEVSQELYPSCTQVTSLEFLIKLMHIKVLN 165
                    + D +N  F+DL+N+   ELYP C++ +SL FL+KLMH+KVLN
Sbjct: 214 MAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLVKLMHVKVLN 261

[Close]

BLAST of MC00g_new0363 vs. ExPASy TrEMBL
Match: A0A5A7UMP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001050 PE=4 SV=1)

HSP 1 Score: 126 bits (317), Expect = 1.75e-30
Identity = 71/176 (40.34%), Postives = 105/176 (59.66%), Query Frame = 0


Query: 2   YVEEVLKFIEVTKFHVNELGKTRCLCKKCQNVLWQLLDVVEQHLFINGISPTYSQWIHHG 61
           Y   V +F+E  KFHV+  G+ RC CK+C N+ W  L+ VE+HL   GISP Y +W++HG
Sbjct: 16  YRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYIEWVYHG 75

Query: 62  DPL------NLDRYSSDTPSSHDDLSRECNVTREENEVFDMLNEMRGPMIEEDENVEDFV 121
           + L      N +  +S  P +    S + N   EE ++F MLN+++ P IE +E +E+F 
Sbjct: 76  ESLSYRGTENFEEGTSSNPFNEGTSSTQFN---EEGDIFGMLNDLQAP-IEHEEEIEEFR 135

Query: 122 YEMPAQ-----GFERDNSNE-FEDLMNEVSQELYPSCTQVTSLEFLIKLMHIKVLN 165
            E           + D +N  F+DL+N+   ELYP C++ +SL FL+KLMH+KVLN
Sbjct: 136 LEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLVKLMHVKVLN 187

The following BLAST results are available for this feature:

BLAST of MC00g_new0363 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g_new0363 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890872.1	6.42e-43	49.69	uncharacterized protein LOC120080309 [Benincasa hispida]	[more]
XP_008455800.1	3.73e-42	50.63	PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo] >KAA0025951.1 CAC...	[more]
KAA0050152.1	1.09e-37	47.88	uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK...	[more]
TYK18968.1	1.90e-30	40.70	uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa]	[more]
KAA0056368.1	3.61e-30	40.34	uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa]	[more]

BLAST of MC00g_new0363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SP00	1.80e-42	50.63	CACTA transposable element OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3C1V3	1.80e-42	50.63	uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=...	[more]
A0A5D3C5I5	5.26e-38	47.88	Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3D5X7	9.19e-31	40.70	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7UMP4	1.75e-30	40.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MC00g_new0363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029480	Transposase-associated domain	PFAM	PF13963	Transpos_assoc	coord: 2..61 e-value: 1.3E-13 score: 50.9
None	No IPR available	PANTHER	PTHR10775	UNCHARACTERIZED	coord: 2..165
None	No IPR available	PANTHER	PTHR10775:SF149	TRANSPOSASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATED	coord: 2..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g_new0363.1	MC00g_new0363.1	mRNA