MC00g0465 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0465
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	high mobility group B protein 6
Location	scaffold196: 81309 .. 82779 (+)
RNA-Seq Expression	MC00g0465
Synteny	MC00g0465

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAAATACTAAAAGAACAAAAATTGAAAGCACAATAATCAAAATGAACCAAAATCAAAAGTAAAGGGATCAAAATAGTATTTAAACAGAAATTCTTCGTCCGCTTGGAGCATGGCCCCGCACGCACGCGACTTGACCCGATCGAACCCGGTGGACAACTTTTGTCTTTTCCTAACTTAAATAAAGTAAGTAATACAATAAACAAAAGTCTGATTATTATATCAAGTAGCCGTTGGCGCCTGTCTAGTTTCAAATTCAAAACCCTAATCTTCTGAAATCCCTCTTTTCTTTTTCTATGACTCCACTTCTCTTCCACAGCAAATCTCCAGATTCTCTCCCAAAATGCAGGCCATTCTCCATCCCCTGCCCGGAGCTCACGATCTCCCTCTAAGATCCGGCCGGCGGCCTCTCCAGCCGAAGAATTCCAATTCCCTGCCAACTCCTCTACCCGCCGTCGCCAAAATCAAGCCCGAACGCATCCAGATCTCGCTCTCCGGCGACGCCAACAAGGAGAACCTTCCGCCGATTCCAGCGACAGCGACGGCGACGATCGAGTCCTGTGATTCGTCACTTGCGGATGAGCTCAATGCGGTCAAGAGGAAGCTCGAGAGATTGAGATTGGACGGCGACAGGACGGAGAAGATGTTCAGAGAGAGGGATGCGATCTTCGAGTTGCAGATGAAGGAGCTGCTGAGGAGAGGTCAAGAGCAGAGGGAACTAGAGATGGAGGTCGATAGGTTATTCAGATTGAAGGAACTCAGATCTTACTGTATGGTAAGCATTTTCATCGCCAGTTGTTGGAAACTTAATCACTGTTAATCTGTTGTTCGTTTGCTTATTTTATTTTGGATGATTTGGATCAGAGAATTTCTCCGATTCGGAGTCTCAGAGAAAAAGAGCGAGAAAAGATCATCACCGATGCACAATTTCCGGTAAATTCCAAGCTCTAACTTCGAAGCAATTTCTCGATTTCTGAGATCCGGATTCATCCGCAATGTAAAATCAATCTCCAAATCTGTAATTGTTTCAGGAAATTGAAGTCGGCGATGGAGAAGAATCTGTTGGCGAGAATTCATCGCTGGATTCTTCAGAATTCGTCACAGGTATATGACGACGAATCGTTTCAGTTTTGTTCGCCGCTTTTGATTTTGCCCAACTTTCCGATTAATTTTCCTTCTAGTTCTGGTTCTTCATCTTCTTTGGAATTCTGCTAAAAGTGGCATTCAAAGGTCAAACAAAATTCAATGTAATACCTCATTATGTTCTTCTTTTGGTTGCTGGAACGGAAATCTTGAAGTGTAATCAACATCATTCTCCATCTTTTTCACTTCATTTATTGTCTGTAAATGAAGAAATTCCAAATCCGCATCTGTGGATTGAAGTTTAGACATTGATTCAATCTAAACAGATTAAAATTTTCTGATTTTGAATTTTAATTTTTCAAGTGTTCATAATAAAATCTATTAGGATC

mRNA sequence

TACAAATACTAAAAGAACAAAAATTGAAAGCACAATAATCAAAATGAACCAAAATCAAAAGTAAAGGGATCAAAATAGTATTTAAACAGAAATTCTTCGTCCGCTTGGAGCATGGCCCCGCACGCACGCGACTTGACCCGATCGAACCCGGTGGACAACTTTTGTCTTTTCCTAACTTAAATAAAGTAAGTAATACAATAAACAAAAGTCTGATTATTATATCAAGTAGCCGTTGGCGCCTGTCTAGTTTCAAATTCAAAACCCTAATCTTCTGAAATCCCTCTTTTCTTTTTCTATGACTCCACTTCTCTTCCACAGCAAATCTCCAGATTCTCTCCCAAAATGCAGGCCATTCTCCATCCCCTGCCCGGAGCTCACGATCTCCCTCTAAGATCCGGCCGGCGGCCTCTCCAGCCGAAGAATTCCAATTCCCTGCCAACTCCTCTACCCGCCGTCGCCAAAATCAAGCCCGAACGCATCCAGATCTCGCTCTCCGGCGACGCCAACAAGGAGAACCTTCCGCCGATTCCAGCGACAGCGACGGCGACGATCGAGTCCTGTGATTCGTCACTTGCGGATGAGCTCAATGCGGTCAAGAGGAAGCTCGAGAGATTGAGATTGGACGGCGACAGGACGGAGAAGATGTTCAGAGAGAGGGATGCGATCTTCGAGTTGCAGATGAAGGAGCTGCTGAGGAGAGGTCAAGAGCAGAGGGAACTAGAGATGGAGGTCGATAGGTTATTCAGATTGAAGGAACTCAGATCTTACTGTATGAGAATTTCTCCGATTCGGAGTCTCAGAGAAAAAGAGCGAGAAAAGATCATCACCGATGCACAATTTCCGGAAATTGAAGTCGGCGATGGAGAAGAATCTGTTGGCGAGAATTCATCGCTGGATTCTTCAGAATTCGTCACAGGTATATGACGACGAATCGTTTCAGTTTTGTTCGCCGCTTTTGATTTTGCCCAACTTTCCGATTAATTTTCCTTCTAGTTCTGGTTCTTCATCTTCTTTGGAATTCTGCTAAAAGTGGCATTCAAAGGTCAAACAAAATTCAATGTAATACCTCATTATGTTCTTCTTTTGGTTGCTGGAACGGAAATCTTGAAGTGTAATCAACATCATTCTCCATCTTTTTCACTTCATTTATTGTCTGTAAATGAAGAAATTCCAAATCCGCATCTGTGGATTGAAGTTTAGACATTGATTCAATCTAAACAGATTAAAATTTTCTGATTTTGAATTTTAATTTTTCAAGTGTTCATAATAAAATCTATTAGGATC

Coding sequence (CDS)

ATGCAGGCCATTCTCCATCCCCTGCCCGGAGCTCACGATCTCCCTCTAAGATCCGGCCGGCGGCCTCTCCAGCCGAAGAATTCCAATTCCCTGCCAACTCCTCTACCCGCCGTCGCCAAAATCAAGCCCGAACGCATCCAGATCTCGCTCTCCGGCGACGCCAACAAGGAGAACCTTCCGCCGATTCCAGCGACAGCGACGGCGACGATCGAGTCCTGTGATTCGTCACTTGCGGATGAGCTCAATGCGGTCAAGAGGAAGCTCGAGAGATTGAGATTGGACGGCGACAGGACGGAGAAGATGTTCAGAGAGAGGGATGCGATCTTCGAGTTGCAGATGAAGGAGCTGCTGAGGAGAGGTCAAGAGCAGAGGGAACTAGAGATGGAGGTCGATAGGTTATTCAGATTGAAGGAACTCAGATCTTACTGTATGAGAATTTCTCCGATTCGGAGTCTCAGAGAAAAAGAGCGAGAAAAGATCATCACCGATGCACAATTTCCGGAAATTGAAGTCGGCGATGGAGAAGAATCTGTTGGCGAGAATTCATCGCTGGATTCTTCAGAATTCGTCACAGGTATATGA

Protein sequence

MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI

Homology

[Close]

BLAST of MC00g0465 vs. NCBI nr
Match: XP_022144077.1 (high mobility group B protein 6 [Momordica charantia])

HSP 1 Score: 363 bits (932), Expect = 3.29e-126
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLP 60
           MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLP
Sbjct: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLP 60

Query: 61  PIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRG 120
           PIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRG
Sbjct: 61  PIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRG 120

Query: 121 QEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGE 180
           QEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGE
Sbjct: 121 QEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGE 180

Query: 181 NSSLDSSEFVTGI 193
           NSSLDSSEFVTGI
Sbjct: 181 NSSLDSSEFVTGI 193

[Close]

BLAST of MC00g0465 vs. NCBI nr
Match: KAA0025412.1 (high mobility group B protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 284 bits (726), Expect = 7.54e-95
Identity = 156/196 (79.59%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKE 60
           MQ + HPLP   D+PL+SGRRPLQPKNS  LP P+P+VAKI   KPE IQISLSGDANKE
Sbjct: 1   MQTLHHPLPSPRDIPLKSGRRPLQPKNS--LPNPVPSVAKIIKSKPEIIQISLSGDANKE 60

Query: 61  NLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELL 120
           N PP     T +IESCD SLADELNAVKRK+ERLRLDG+RTEKM RERD + EL+MKELL
Sbjct: 61  NHPP---ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELL 120

Query: 121 RRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEES 180
           +R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEES
Sbjct: 121 QRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEES 180

Query: 181 VGENSSLDSSEFVTGI 193
           VGENSSLDSSEFVTG 
Sbjct: 181 VGENSSLDSSEFVTGF 191

[Close]

BLAST of MC00g0465 vs. NCBI nr
Match: XP_004142680.1 (high mobility group B protein 6 [Cucumis sativus] >KGN54454.1 hypothetical protein Csa_012022 [Cucumis sativus])

HSP 1 Score: 283 bits (725), Expect = 1.07e-94
Identity = 157/196 (80.10%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKE 60
           MQ + HPLP   DLPL+SGRRPLQPKNS  LP P+P+VAKI   KPE IQISLSGDANKE
Sbjct: 1   MQTLHHPLPPPRDLPLKSGRRPLQPKNS--LPNPVPSVAKIIKSKPEIIQISLSGDANKE 60

Query: 61  NLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELL 120
           N PP     T +IESCD SLADELNAVKRK+ERLRLDG+RTEKM RERD + EL+MKELL
Sbjct: 61  NHPP---PTTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELL 120

Query: 121 RRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEES 180
           +R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEES
Sbjct: 121 QRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEES 180

Query: 181 VGENSSLDSSEFVTGI 193
           VGENSSLDSSEFVTG 
Sbjct: 181 VGENSSLDSSEFVTGF 191

[Close]

BLAST of MC00g0465 vs. NCBI nr
Match: XP_038883293.1 (uncharacterized protein LOC120074285 [Benincasa hispida])

HSP 1 Score: 282 bits (722), Expect = 3.77e-94
Identity = 159/199 (79.90%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKE 60
           MQ + HPL    DLPL+SGRRPLQPKNS  LP   P+VAK    KPERIQISLSGDANKE
Sbjct: 1   MQTLHHPLATPQDLPLKSGRRPLQPKNS--LPNSGPSVAKFIKSKPERIQISLSGDANKE 60

Query: 61  NLPPIPATATAT---IESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMK 120
           N PPI ATAT T   IESCDSSLADELNAVKRKLERLRLDG+RTE+M RERD + EL+MK
Sbjct: 61  NHPPIHATATTTTASIESCDSSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMK 120

Query: 121 ELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDG 180
           ELL+R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDG
Sbjct: 121 ELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDG 180

Query: 181 EESVGENSSLDSSEFVTGI 193
           EESVGENSSLDS+ FVTG 
Sbjct: 181 EESVGENSSLDSAGFVTGF 197

[Close]

BLAST of MC00g0465 vs. NCBI nr
Match: XP_008463266.1 (PREDICTED: high mobility group B protein 6 [Cucumis melo] >TYK09760.1 high mobility group B protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 280 bits (716), Expect = 2.51e-93
Identity = 155/196 (79.08%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKE 60
           MQ + HPLP   D+PL+SGRRPLQPKNS  LP  +P+VAKI   KPE IQISLSGDANKE
Sbjct: 1   MQTLHHPLPSPRDIPLKSGRRPLQPKNS--LPNLVPSVAKIIKSKPEIIQISLSGDANKE 60

Query: 61  NLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELL 120
           N PP     T +IESCD SLADELNAVKRK+ERLRLDG+RTEKM RERD + EL+MKELL
Sbjct: 61  NHPP---ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELL 120

Query: 121 RRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEES 180
           +R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEES
Sbjct: 121 QRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEES 180

Query: 181 VGENSSLDSSEFVTGI 193
           VGENSSLDSSEFVTG 
Sbjct: 181 VGENSSLDSSEFVTGF 191

[Close]

BLAST of MC00g0465 vs. ExPASy TrEMBL
Match: A0A6J1CSN6 (high mobility group B protein 6 OS=Momordica charantia OX=3673 GN=LOC111013855 PE=4 SV=1)

HSP 1 Score: 363 bits (932), Expect = 1.59e-126
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLP 60
           MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLP
Sbjct: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLP 60

Query: 61  PIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRG 120
           PIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRG
Sbjct: 61  PIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRG 120

Query: 121 QEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGE 180
           QEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGE
Sbjct: 121 QEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGE 180

Query: 181 NSSLDSSEFVTGI 193
           NSSLDSSEFVTGI
Sbjct: 181 NSSLDSSEFVTGI 193

[Close]

BLAST of MC00g0465 vs. ExPASy TrEMBL
Match: A0A5A7SJQ2 (High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00510 PE=4 SV=1)

HSP 1 Score: 284 bits (726), Expect = 3.65e-95
Identity = 156/196 (79.59%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKE 60
           MQ + HPLP   D+PL+SGRRPLQPKNS  LP P+P+VAKI   KPE IQISLSGDANKE
Sbjct: 1   MQTLHHPLPSPRDIPLKSGRRPLQPKNS--LPNPVPSVAKIIKSKPEIIQISLSGDANKE 60

Query: 61  NLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELL 120
           N PP     T +IESCD SLADELNAVKRK+ERLRLDG+RTEKM RERD + EL+MKELL
Sbjct: 61  NHPP---ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELL 120

Query: 121 RRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEES 180
           +R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEES
Sbjct: 121 QRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEES 180

Query: 181 VGENSSLDSSEFVTGI 193
           VGENSSLDSSEFVTG 
Sbjct: 181 VGENSSLDSSEFVTGF 191

[Close]

BLAST of MC00g0465 vs. ExPASy TrEMBL
Match: A0A0A0L063 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G334650 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 5.19e-95
Identity = 157/196 (80.10%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKE 60
           MQ + HPLP   DLPL+SGRRPLQPKNS  LP P+P+VAKI   KPE IQISLSGDANKE
Sbjct: 1   MQTLHHPLPPPRDLPLKSGRRPLQPKNS--LPNPVPSVAKIIKSKPEIIQISLSGDANKE 60

Query: 61  NLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELL 120
           N PP     T +IESCD SLADELNAVKRK+ERLRLDG+RTEKM RERD + EL+MKELL
Sbjct: 61  NHPP---PTTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELL 120

Query: 121 RRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEES 180
           +R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEES
Sbjct: 121 QRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEES 180

Query: 181 VGENSSLDSSEFVTGI 193
           VGENSSLDSSEFVTG 
Sbjct: 181 VGENSSLDSSEFVTGF 191

[Close]

BLAST of MC00g0465 vs. ExPASy TrEMBL
Match: A0A5D3CEI7 (High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00430 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 1.22e-93
Identity = 155/196 (79.08%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKE 60
           MQ + HPLP   D+PL+SGRRPLQPKNS  LP  +P+VAKI   KPE IQISLSGDANKE
Sbjct: 1   MQTLHHPLPSPRDIPLKSGRRPLQPKNS--LPNLVPSVAKIIKSKPEIIQISLSGDANKE 60

Query: 61  NLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELL 120
           N PP     T +IESCD SLADELNAVKRK+ERLRLDG+RTEKM RERD + EL+MKELL
Sbjct: 61  NHPP---ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELL 120

Query: 121 RRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEES 180
           +R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEES
Sbjct: 121 QRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEES 180

Query: 181 VGENSSLDSSEFVTGI 193
           VGENSSLDSSEFVTG 
Sbjct: 181 VGENSSLDSSEFVTGF 191

[Close]

BLAST of MC00g0465 vs. ExPASy TrEMBL
Match: A0A1S3CJ78 (high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103501469 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 1.22e-93
Identity = 155/196 (79.08%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 1   MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKE 60
           MQ + HPLP   D+PL+SGRRPLQPKNS  LP  +P+VAKI   KPE IQISLSGDANKE
Sbjct: 1   MQTLHHPLPSPRDIPLKSGRRPLQPKNS--LPNLVPSVAKIIKSKPEIIQISLSGDANKE 60

Query: 61  NLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELL 120
           N PP     T +IESCD SLADELNAVKRK+ERLRLDG+RTEKM RERD + EL+MKELL
Sbjct: 61  NHPP---ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELL 120

Query: 121 RRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEES 180
           +R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEES
Sbjct: 121 QRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEES 180

Query: 181 VGENSSLDSSEFVTGI 193
           VGENSSLDSSEFVTG 
Sbjct: 181 VGENSSLDSSEFVTGF 191

[Close]

BLAST of MC00g0465 vs. TAIR 10
Match: AT5G01910.1 (unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; Bacteria - 2; Metazoa - 18; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 3.7e-23
Identity = 74/162 (45.68%), Postives = 100/162 (61.73%), Query Frame = 0


Query: 18  SGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIE-SCDSS 77
           SGR+ LQP+  N   TP      +KP+      + +  KENL          +E S D+S
Sbjct: 4   SGRKALQPR--NIYQTPKEDAFFVKPK------AAEKLKENL---------NLETSIDAS 63

Query: 78  LADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRL 137
           LA+EL+A K+KLERLR D + TEK+ +ERD   +L M  LL+RG+ Q+ LE++VDRLFRL
Sbjct: 64  LAEELSAFKKKLERLREDRESTEKLLKERDEAMDLHMSHLLQRGETQKSLEIQVDRLFRL 123

Query: 138 KELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESV 179
           KEL +Y  +ISPIRSLR KE+++ +    F   E  D E SV
Sbjct: 124 KELHAYSSKISPIRSLRAKEQQEKMRRFTFAGEEQPDEESSV 148

[Close]

BLAST of MC00g0465 vs. TAIR 10
Match: AT5G01910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-22
Identity = 68/143 (47.55%), Postives = 93/143 (65.03%), Query Frame = 0


Query: 18  SGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIE-SCDSS 77
           SGR+ LQP+  N   TP      +KP+      + +  KENL          +E S D+S
Sbjct: 4   SGRKALQPR--NIYQTPKEDAFFVKPK------AAEKLKENL---------NLETSIDAS 63

Query: 78  LADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRL 137
           LA+EL+A K+KLERLR D + TEK+ +ERD   +L M  LL+RG+ Q+ LE++VDRLFRL
Sbjct: 64  LAEELSAFKKKLERLREDRESTEKLLKERDEAMDLHMSHLLQRGETQKSLEIQVDRLFRL 123

Query: 138 KELRSYCMRISPIRSLREKEREK 160
           KEL +Y  +ISPIRSLR KE+++
Sbjct: 124 KELHAYSSKISPIRSLRAKEQQE 129

[Close]

BLAST of MC00g0465 vs. TAIR 10
Match: AT4G23800.1 (HMG (high mobility group) box protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.8e-04
Identity = 34/124 (27.42%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 36  PAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDG 95
           PA  K KP   + +L         PP P +          S   +L  ++  LE+++++ 
Sbjct: 7   PAPTK-KPRNSRKALKQKNELVETPPSPVSVKG---KSAKSFEQDLMEMQTMLEKMKIEK 66

Query: 96  DRTEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREK 155
           D+TE++ +E+D I   + +EL  R  EQ +L++E+ +L ++KE +          SL + 
Sbjct: 67  DKTEELLKEKDEILRKKEEELETRDAEQEKLKVELKKLQKMKEFKPNMTFACGQSSLTQA 126

Query: 156 EREK 160
           E+EK
Sbjct: 127 EQEK 126

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BLAST of MC00g0465 vs. TAIR 10
Match: AT4G23800.2 (HMG (high mobility group) box protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.8e-04
Identity = 34/124 (27.42%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 36  PAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDG 95
           PA  K KP   + +L         PP P +          S   +L  ++  LE+++++ 
Sbjct: 7   PAPTK-KPRNSRKALKQKNELVETPPSPVSVKG---KSAKSFEQDLMEMQTMLEKMKIEK 66

Query: 96  DRTEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREK 155
           D+TE++ +E+D I   + +EL  R  EQ +L++E+ +L ++KE +          SL + 
Sbjct: 67  DKTEELLKEKDEILRKKEEELETRDAEQEKLKVELKKLQKMKEFKPNMTFACGQSSLTQA 126

Query: 156 EREK 160
           E+EK
Sbjct: 127 EQEK 126

The following BLAST results are available for this feature:

BLAST of MC00g0465 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g0465 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144077.1	3.29e-126	100.00	high mobility group B protein 6 [Momordica charantia]	[more]
KAA0025412.1	7.54e-95	79.59	high mobility group B protein 6 [Cucumis melo var. makuwa]	[more]
XP_004142680.1	1.07e-94	80.10	high mobility group B protein 6 [Cucumis sativus] >KGN54454.1 hypothetical prote...	[more]
XP_038883293.1	3.77e-94	79.90	uncharacterized protein LOC120074285 [Benincasa hispida]	[more]
XP_008463266.1	2.51e-93	79.08	PREDICTED: high mobility group B protein 6 [Cucumis melo] >TYK09760.1 high mobil...	[more]

BLAST of MC00g0465 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSN6	1.59e-126	100.00	high mobility group B protein 6 OS=Momordica charantia OX=3673 GN=LOC111013855 P...	[more]
A0A5A7SJQ2	3.65e-95	79.59	High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A0A0L063	5.19e-95	80.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G334650 PE=4 SV=1	[more]
A0A5D3CEI7	1.22e-93	79.08	High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CJ78	1.22e-93	79.08	high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103501469 PE=4 SV=...	[more]

BLAST of MC00g0465 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01910.1	3.7e-23	45.68	unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; Bac...	[more]
AT5G01910.2	2.4e-22	47.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G23800.1	3.8e-04	27.42	HMG (high mobility group) box protein	[more]
AT4G23800.2	3.8e-04	27.42	HMG (high mobility group) box protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 81..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR36790	MYELIN TRANSCRIPTION FACTOR	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0465.1	MC00g0465.1	mRNA