MC00g0461 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0461
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ubiquitin-conjugating enzyme E2 28
Location	scaffold196: 49482 .. 52046 (+)
RNA-Seq Expression	MC00g0461
Synteny	MC00g0461

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTTTTAAGCATGACATAGTCTACATGGAACTTTATTTGTCCTCCACATGACAATGTGATTTTCTCTCCCCAACAAATAGTTTCACTATTCGATTTTGATTTTTATAGGGTGGTACTAAAATCTAACCCTGATCAGACATAATTTTAACAAGATTATACCCTTAAGAACCAAAAAAATATTATTGCTATTTGAGCATGTAAAATTAGAGAAGCTACCGATTCTCACAAGTAAAAGAATGGATAAGATTGGAAGGCGGTAAGAAAATAAAAAAAAGGGGGATTTTTGGGATCGCTATAAATATTCTAAGTCCGCTGTGATTTGGGTTGGCGATTGGCGGAGCTCTTGGGTCTCCACATTCTCAAATTGCAGAAAAATCAAAGGGTAAAGAGACCCACCAAGAAGTAGCGGTTGGTTTCTGGGGGCGGCCCTGGATCTGCTTTCCAACTCTATTTCCCCTCCCCGCCGATCTTCATCTCNCGTCTGCTCTGTTCTTAGCTTGATGGGTTTTTTGCATCTTCTCGTTTTTGATCGTTTTTGCCTCTAGAACATGGCTTCGAAGCGTATCTTGAAGGAACTCAAGGATTTGCAGAAGGATCCGCCCACATCTTGCAGCGCTGGTGCGTTCTTAAGCTTTGATCTCTTTATTTTGTGATCTAAATTTTTGCATACGTTGTGGGAAATGAATGAATCGATTTCTGTTCCAATTTCATTTAGGGTTTTTGTGATTGATTTTGTTGTTGACCTTCTGATCTGTCTTGATGTGATGATGATTAGGGTGATGTTTTTGGAATTTTGATTTTGAGGATAGGTCCTGTAGCTGAAGATATGTTCCATTGGCAAGCGACCATTATGGGGCCATCTGATAGTCCTTATTCGGGAGGTGTTTTTCTTGTCAATATTCATTTCCCTCCTGATTACCCTTTCAAGCCCCCCAAGGTAAATGATGTTTTGTTTTCAAATGATCTATCGTCTGTGCAAGATGATTCTGTGTTTACCGTTTTTCTTTTCGTCGGAGTAGTATACGACCTCTGAACCGAGGTTTTGATGGTTGTGTATTGTTCAGGTTGCTTTTAGGACCAAAGTCTTCCACCCTAATATCAATAGCAACGGAAGCATTTGTCTTGACATCCTTAAGGAACAGTGGAGCCCTGCGCTTACAATTTCTAAGGTTGGTTCGACTTTTTCGTTTATCTTCTGGTTCCTGAATCTGGCCTGTCATTGTGTGATGTCTACATGATGAATATAACTTTGGTCATGTTTGGTATACAATACATGTGCTTTTGTTGTAATAAAGTTATGTGTGGCGTAGCATGGATTGCGTACTGGTTTGAAAGTTCCATAGTTGATGGAGAATCTTAGAATACCCGAGTAACACTGGTAAATTCATGACCTTGGTAGCATGGCCTTTAATCAACAGCATAGTTCAATTTCTGCTTTTGTTTTCTTGGTGGGTGTCTGTGGTTTGATCACATAAGCATTCTGGAAATTGTCTGAATCACGATCTTGCTGCTAAGTTAACATAAATTTTTGGGTTGAGTGGTAGTTTAATATGGTATCATAGTAGAAGGTTCTGTATTCGAACCCCATTTTCCTCACTAGTTCATGATTTCTTTTTTAGTTAAGAATAGTCCCATTTCCCCCCTTTTATCATTGAGATGATGGGCCCTGCTTGTTGCATTATTCTCATGGCGTGCTAACACCCCACCAATCCCCGAACGGTTTGCCCCACCCAAAGGACAGCTCTCCGGGGCAGTCGAGAACAGTCATTAATTTGTGTTTCCACCCTATAAAAGTGTTGAGGAAGAAGTGGTTGTTGTGGCCATCATCACTTGTTAATATGTAGGGTACCTCAGCTGGCATCAATGTTTAGAGAAGCCCTCATTCTATCTACATTGCTGTGACTTCGTTATCATGGAATAAGATCAGTTTCCCATCTGTGAACTTGCATTCCTCATCAGCTTTATTGATTTAGATTTCACTATAGACCCGCACAACTGCTACTCGCAATCCCGCTTGGGATAAAGTAAAAGAACGAGATTGACATGATTTCATTTCCCTTTCATCTTGTCAAATAGACGGGCAAATACCTAAAAACACTAATGTCTAATGGTGTTGATGAACCAGGTCCTGCTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTCGTACCGGAGATCGCACACATGTACAAGACTGATCGAGCCAAGTACGAAGCGAGTGCACGGAGCTGGACTCAGAAGTATGCGATGGGTTGAGATGCAGTGTCGGTGATGGTGATGATGATGACGATGGTGGGTGGGATCTTTAGCATGGCATCCTTCTGTATTTTCCTTGGTTTCTTGCAGTTATTTGGGCTGTGTAGGTAAAAAGAAAAAAGAAGTTTTATGCTGTTTTTTTAGCTTTGCCACTGAAATTTAATTTATGAATGAAAGATGGAAGCAAGTGTCTAAGATTGTCAAATTAACTGGATTGAACATTCCCTCTTAAATGGGGATTTGATGCAAGCACTTATTTATCTCATTCCTAAGTTTTTTTTTTCCCCTTTTCCTT

mRNA sequence

GGCTTTTAAGCATGACATAGTCTACATGGAACTTTATTTGTCCTCCACATGACAATGTGATTTTCTCTCCCCAACAAATAGTTTCACTATTCGATTTTGATTTTTATAGGGTGGTACTAAAATCTAACCCTGATCAGACATAATTTTAACAAGATTATACCCTTAAGAACCAAAAAAATATTATTGCTATTTGAGCATGTAAAATTAGAGAAGCTACCGATTCTCACAAGTAAAAGAATGGATAAGATTGGAAGGCGGTAAGAAAATAAAAAAAAGGGGGATTTTTGGGATCGCTATAAATATTCTAAGTCCGCTGTGATTTGGGTTGGCGATTGGCGGAGCTCTTGGGTCTCCACATTCTCAAATTGCAGAAAAATCAAAGGGTAAAGAGACCCACCAAGAAGTAGCGGTTGGTTTCTGGGGGCGGCCCTGGATCTGCTTTCCAACTCTATTTCCCCTCCCCGCCGATCTTCATCTCNCGTCTGCTCTGTTCTTAGCTTGATGGGTTTTTTGCATCTTCTCGTTTTTGATCGTTTTTGCCTCTAGAACATGGCTTCGAAGCGTATCTTGAAGGAACTCAAGGATTTGCAGAAGGATCCGCCCACATCTTGCAGCGCTGGTCCTGTAGCTGAAGATATGTTCCATTGGCAAGCGACCATTATGGGGCCATCTGATAGTCCTTATTCGGGAGGTGTTTTTCTTGTCAATATTCATTTCCCTCCTGATTACCCTTTCAAGCCCCCCAAGGTTGCTTTTAGGACCAAAGTCTTCCACCCTAATATCAATAGCAACGGAAGCATTTGTCTTGACATCCTTAAGGAACAGTGGAGCCCTGCGCTTACAATTTCTAAGGTCCTGCTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTCGTACCGGAGATCGCACACATGTACAAGACTGATCGAGCCAAGTACGAAGCGAGTGCACGGAGCTGGACTCAGAAGTATGCGATGGGTTGAGATGCAGTGTCGGTGATGGTGATGATGATGACGATGGTGGGTGGGATCTTTAGCATGGCATCCTTCTGTATTTTCCTTGGTTTCTTGCAGTTATTTGGGCTGTGTAGGTAAAAAGAAAAAAGAAGTTTTATGCTGTTTTTTTAGCTTTGCCACTGAAATTTAATTTATGAATGAAAGATGGAAGCAAGTGTCTAAGATTGTCAAATTAACTGGATTGAACATTCCCTCTTAAATGGGGATTTGATGCAAGCACTTATTTATCTCATTCCTAAGTTTTTTTTTTCCCCTTTTCCTT

Coding sequence (CDS)

ATGGCTTCGAAGCGTATCTTGAAGGAACTCAAGGATTTGCAGAAGGATCCGCCCACATCTTGCAGCGCTGGTCCTGTAGCTGAAGATATGTTCCATTGGCAAGCGACCATTATGGGGCCATCTGATAGTCCTTATTCGGGAGGTGTTTTTCTTGTCAATATTCATTTCCCTCCTGATTACCCTTTCAAGCCCCCCAAGGTTGCTTTTAGGACCAAAGTCTTCCACCCTAATATCAATAGCAACGGAAGCATTTGTCTTGACATCCTTAAGGAACAGTGGAGCCCTGCGCTTACAATTTCTAAGGTCCTGCTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTCGTACCGGAGATCGCACACATGTACAAGACTGATCGAGCCAAGTACGAAGCGAGTGCACGGAGCTGGACTCAGAAGTATGCGATGGGTTGA

Protein sequence

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEASARSWTQKYAMG

Homology

[Close]

BLAST of MC00g0461 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 8.9e-83
Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 149
           PEIAHMYKTDRAKYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.4e-82
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP+DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 149
           PEIAHMYKTDRAKYE +ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 4.4e-82
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 149
           PEIAHMYKTDRAKYEA+AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.7e-81
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 149
           PEIAHMYKTD+ KYE++AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. ExPASy Swiss-Prot
Match: Q8S919 (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 2.9e-81
Identity = 141/148 (95.27%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQAT+MGPSDSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVA +TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 149
           PEIAHMYKTDRAKYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. NCBI nr
Match: XP_004142676.1 (ubiquitin-conjugating enzyme E2 28 [Cucumis sativus] >XP_008463276.1 PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis melo] >XP_022144084.1 ubiquitin-conjugating enzyme E2 28-like [Momordica charantia] >XP_022924950.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita moschata] >XP_022950142.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita moschata] >XP_022966476.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita maxima] >XP_022978308.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita maxima] >XP_023517728.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita pepo subsp. pepo] >XP_023517729.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita pepo subsp. pepo] >XP_023543247.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita pepo subsp. pepo] >XP_038882512.1 ubiquitin-conjugating enzyme E2 28-like [Benincasa hispida] >KAG6595637.1 Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. sororia] >KGN54461.1 hypothetical protein Csa_012070 [Cucumis sativus])

HSP 1 Score: 311 bits (797), Expect = 4.18e-107
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148
           PEIAHMYKTDRAKYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. NCBI nr
Match: TYK09753.1 (ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (797), Expect = 1.68e-106
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 41  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 100

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 101 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 160

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148
           PEIAHMYKTDRAKYEASARSWTQKYAMG
Sbjct: 161 PEIAHMYKTDRAKYEASARSWTQKYAMG 188

[Close]

BLAST of MC00g0461 vs. NCBI nr
Match: XP_012487118.1 (PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Gossypium raimondii] >XP_012487119.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Gossypium raimondii] >XP_016715337.2 ubiquitin-conjugating enzyme E2-17 kDa [Gossypium hirsutum] >XP_016715338.2 ubiquitin-conjugating enzyme E2-17 kDa [Gossypium hirsutum] >XP_016730948.1 ubiquitin-conjugating enzyme E2-17 kDa [Gossypium hirsutum] >XP_016730949.1 ubiquitin-conjugating enzyme E2-17 kDa [Gossypium hirsutum] >XP_017612035.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Gossypium arboreum] >XP_017612036.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Gossypium arboreum] >KAB2014541.1 hypothetical protein ES319_D09G232900v1 [Gossypium barbadense] >KAG8484468.1 hypothetical protein CXB51_023801 [Gossypium anomalum] >MBA0768398.1 hypothetical protein [Gossypium trilobum] >MBA0857568.1 hypothetical protein [Gossypium schwendimanii] >TYH03856.1 hypothetical protein ES288_A09G252100v1 [Gossypium darwinii] >TYH55652.1 hypothetical protein ES332_D09G249900v1 [Gossypium tomentosum] >TYI66664.1 hypothetical protein E1A91_D09G241000v1 [Gossypium mustelinum])

HSP 1 Score: 307 bits (787), Expect = 1.40e-105
Identity = 145/148 (97.97%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSP++GGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148
           PEIAHMYKTDRAKYEA+ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. NCBI nr
Match: KAD6119935.1 (hypothetical protein E3N88_11206 [Mikania micrantha])

HSP 1 Score: 307 bits (787), Expect = 1.40e-105
Identity = 144/148 (97.30%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFL+NIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLINIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148
           PEIAHMYKTD++KYEA+ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKSKYEATARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. NCBI nr
Match: XP_021977969.1 (ubiquitin-conjugating enzyme E2 28 [Helianthus annuus] >KAF5796050.1 putative ubiquitin-conjugating enzyme E2, ubiquitin-conjugating enzyme/RWD [Helianthus annuus])

HSP 1 Score: 307 bits (786), Expect = 1.99e-105
Identity = 144/148 (97.30%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRI+KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRIIKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148
           PEIAHMYKTD++KYEA+ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKSKYEATARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. ExPASy TrEMBL
Match: A0A6J1ISN6 (ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita maxima OX=3661 GN=LOC111478335 PE=3 SV=1)

HSP 1 Score: 311 bits (797), Expect = 2.03e-107
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148
           PEIAHMYKTDRAKYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. ExPASy TrEMBL
Match: A0A6J1EGH9 (ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita moschata OX=3662 GN=LOC111432341 PE=3 SV=1)

HSP 1 Score: 311 bits (797), Expect = 2.03e-107
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148
           PEIAHMYKTDRAKYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. ExPASy TrEMBL
Match: A0A0A0L2X5 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G334720 PE=3 SV=1)

HSP 1 Score: 311 bits (797), Expect = 2.03e-107
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148
           PEIAHMYKTDRAKYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. ExPASy TrEMBL
Match: A0A6J1CR94 (ubiquitin-conjugating enzyme E2 28-like OS=Momordica charantia OX=3673 GN=LOC111013862 PE=3 SV=1)

HSP 1 Score: 311 bits (797), Expect = 2.03e-107
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148
           PEIAHMYKTDRAKYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. ExPASy TrEMBL
Match: A0A1S3CIW1 (ubiquitin-conjugating enzyme E2 28 OS=Cucumis melo OX=3656 GN=LOC103501476 PE=3 SV=1)

HSP 1 Score: 311 bits (797), Expect = 2.03e-107
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148
           PEIAHMYKTDRAKYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 307.4 bits (786), Expect = 6.3e-84
Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 149
           PEIAHMYKTDRAKYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 307.4 bits (786), Expect = 6.3e-84
Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 149
           PEIAHMYKTDRAKYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. TAIR 10
Match: AT5G41700.2 (ubiquitin conjugating enzyme 8 )

HSP 1 Score: 305.1 bits (780), Expect = 3.1e-83
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 149
           PEIAHMYKTDRAKYEA+AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. TAIR 10
Match: AT5G41700.1 (ubiquitin conjugating enzyme 8 )

HSP 1 Score: 305.1 bits (780), Expect = 3.1e-83
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 149
           PEIAHMYKTDRAKYEA+AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]

BLAST of MC00g0461 vs. TAIR 10
Match: AT5G41700.5 (ubiquitin conjugating enzyme 8 )

HSP 1 Score: 305.1 bits (780), Expect = 3.1e-83
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 149
           PEIAHMYKTDRAKYEA+AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

The following BLAST results are available for this feature:

BLAST of MC00g0461 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94F47	8.9e-83	97.30	Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1...	[more]
P35135	3.4e-82	96.62	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P35131	4.4e-82	96.62	Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S...	[more]
P35132	1.7e-81	95.95	SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1	[more]
Q8S919	2.9e-81	95.27	Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=U...	[more]

BLAST of MC00g0461 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142676.1	4.18e-107	100.00	ubiquitin-conjugating enzyme E2 28 [Cucumis sativus] >XP_008463276.1 PREDICTED: ...	[more]
TYK09753.1	1.68e-106	100.00	ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo var. makuwa]	[more]
XP_012487118.1	1.40e-105	97.97	PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Gossypium raimondii] >XP...	[more]
KAD6119935.1	1.40e-105	97.30	hypothetical protein E3N88_11206 [Mikania micrantha]	[more]
XP_021977969.1	1.99e-105	97.30	ubiquitin-conjugating enzyme E2 28 [Helianthus annuus] >KAF5796050.1 putative ub...	[more]

BLAST of MC00g0461 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ISN6	2.03e-107	100.00	ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita maxima OX=3661 GN=LOC111478...	[more]
A0A6J1EGH9	2.03e-107	100.00	ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0L2X5	2.03e-107	100.00	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G334720 PE...	[more]
A0A6J1CR94	2.03e-107	100.00	ubiquitin-conjugating enzyme E2 28-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3CIW1	2.03e-107	100.00	ubiquitin-conjugating enzyme E2 28 OS=Cucumis melo OX=3656 GN=LOC103501476 PE=3 ...	[more]

BLAST of MC00g0461 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64230.1	6.3e-84	97.30	ubiquitin-conjugating enzyme 28	[more]
AT1G64230.2	6.3e-84	97.30	ubiquitin-conjugating enzyme 28	[more]
AT5G41700.2	3.1e-83	96.62	ubiquitin conjugating enzyme 8	[more]
AT5G41700.1	3.1e-83	96.62	ubiquitin conjugating enzyme 8	[more]
AT5G41700.5	3.1e-83	96.62	ubiquitin conjugating enzyme 8	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 4..147 e-value: 1.9E-78 score: 276.6
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..145
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 3..145
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..148 e-value: 7.6E-75 score: 251.9
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 2..147
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 5..141 e-value: 1.6E-53 score: 180.1
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..147 score: 60.46505
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 3..142 e-value: 1.50784E-74 score: 217.07
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 74..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0461.1	MC00g0461.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016746	acyltransferase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004839	ubiquitin activating enzyme activity
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity