LsiUNG000330 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	LsiUNG000330
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	PLATZ transcription factor family protein
Location	chr00: 534134 .. 535819 (-)
RNA-Seq Expression	LsiUNG000330
Synteny	LsiUNG000330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGGGGGAAATGATAATTAGAATAAAAATAATGTGGGAGGGAATGGAATAGAAAAATATGCGATAAGACCGAAGCAAAGAAGAAAATGAAAGGAAATTTATAAAGGAAAGAAGGAGAAGAGTTCCTTGTAGCCAACGCATCTTTTCTCATTTGCTTCGGCTTCGAACCTTTTTGCTTCGGTTTAGACTTTTTGCAGATAAGAACGACTTCTCTCTCTCCGTCTTCTTCCCCCAATTTCTCCTCTCTTACAAGAATCCCTTCCCCTTTCCTTTCGCCGCCCTTACTCAATAACCCCCCCTCTCTCTTCTGTTCTACTCTCTCTTCCTCCTTCAATCTGGCTATCGAAGAAATCTACCCCAAGAATCGAACAATCATGGTATGGTAAATCATTTTCTGGGTTCTTCTCTAAATCTCTAACCATTCATTCTCAATCCCTTTTTTTGATGGGTTTTTCTTTTCTTCTTAAAAACAGGGTGTTGGTTGTCCTGAGGATGAAGATAACAGATGGCCGCCATGGCTTAAACCTTTACTTCGTGAAACCTTCTTTGTTCAATGCAAGTTTCATGCCGATTCTCACAAGAGTGAATGTAATATGTATTGTTTGGATTGCATGAATGGCGCTCTCTGTTCTCTCTGTCTCGCTTTTCATAAAGACCATCGCGCTATTCAGGTTAATTTCTGTCCTCATTCCCAAAAACAGGGGTTGCGGTTGCTCTGTTTCTTTTTTTCCCCTCTCTAATTCCGCCTCTGTTTTTATACAGATTAGAAGATCTTCATATCATGATGTGATAAGGGTATCTGAGATTCAGAAAGTTCTTGACATAACCGGCGTTCAAACCTACATTATCAACAGCGCAAGAGTCGTCTTCTTGAATGAACGGCCACAACCTAGGCCTGGGAAAGGCGTAACAAACACCTGTGAAGTTTGTGAACGCAGTCTCCTTGATTCCTTCCGATTCTGTTCTCTTGGCTGTAAGGTAAAAAAAAAGAGAAACCAGTCTCTTGCAATTTTCTTATCAATGTGGAAGAATTTGGAGAAATTAAATTGTGGGTTTTCTGTGGTTTTAGATTGTGGGAACATCGAAGAATTTCGAGAAGAAACGGCGAGTGATGGGATCGGATTCAGAGGATTCATCGTACAGTAGTAATAGTAGCCAAGGGAGAATAATGAAGAACAACAATAAGAACAGAGTTGTGCAGAGTTTCACACCGTCAACGCCACCCCCAACTTTGGTCAGTTACAGAACAGCCAAGCGAAGAAAGGGGATTCCACACAGAGCTCCAATGGGAGGACTCATTATCGAATATTGAAAAAAAAAAAAAGAAAAAAAAAACCTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT

mRNA sequence

AAATGGGGGAAATGATAATTAGAATAAAAATAATGTGGGAGGGAATGGAATAGAAAAATATGCGATAAGACCGAAGCAAAGAAGAAAATGAAAGGAAATTTATAAAGGAAAGAAGGAGAAGAGTTCCTTGTAGCCAACGCATCTTTTCTCATTTGCTTCGGCTTCGAACCTTTTTGCTTCGGTTTAGACTTTTTGCAGATAAGAACGACTTCTCTCTCTCCGTCTTCTTCCCCCAATTTCTCCTCTCTTACAAGAATCCCTTCCCCTTTCCTTTCGCCGCCCTTACTCAATAACCCCCCCTCTCTCTTCTGTTCTACTCTCTCTTCCTCCTTCAATCTGGCTATCGAAGAAATCTACCCCAAGAATCGAACAATCATGGGTGTTGGTTGTCCTGAGGATGAAGATAACAGATGGCCGCCATGGCTTAAACCTTTACTTCGTGAAACCTTCTTTGTTCAATGCAAGTTTCATGCCGATTCTCACAAGAGTGAATGTAATATGTATTGTTTGGATTGCATGAATGGCGCTCTCTGTTCTCTCTGTCTCGCTTTTCATAAAGACCATCGCGCTATTCAGATTAGAAGATCTTCATATCATGATGTGATAAGGGTATCTGAGATTCAGAAAGTTCTTGACATAACCGGCGTTCAAACCTACATTATCAACAGCGCAAGAGTCGTCTTCTTGAATGAACGGCCACAACCTAGGCCTGGGAAAGGCGTAACAAACACCTGTGAAGTTTGTGAACGCAGTCTCCTTGATTCCTTCCGATTCTGTTCTCTTGGCTGTAAGGTAAAAAAAAAGAGAAACCAGTCTCTTGCAATTTTCTTATCAATGTGGAAGAATTTGGAGAAATTAAATTGTGGGTTTTCTGTGATTGTGGGAACATCGAAGAATTTCGAGAAGAAACGGCGAGTGATGGGATCGGATTCAGAGGATTCATCGTACAGTAGTAATAGTAGCCAAGGGAGAATAATGAAGAACAACAATAAGAACAGAGTTGTGCAGAGTTTCACACCGTCAACGCCACCCCCAACTTTGGTCAGTTACAGAACAGCCAAGCGAAGAAAGGGGATTCCACACAGAGCTCCAATGGGAGGACTCATTATCGAATATTGAAAAAAAAAAAAAGAAAAAAAAAACCTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT

Coding sequence (CDS)

ATGGGTGTTGGTTGTCCTGAGGATGAAGATAACAGATGGCCGCCATGGCTTAAACCTTTACTTCGTGAAACCTTCTTTGTTCAATGCAAGTTTCATGCCGATTCTCACAAGAGTGAATGTAATATGTATTGTTTGGATTGCATGAATGGCGCTCTCTGTTCTCTCTGTCTCGCTTTTCATAAAGACCATCGCGCTATTCAGATTAGAAGATCTTCATATCATGATGTGATAAGGGTATCTGAGATTCAGAAAGTTCTTGACATAACCGGCGTTCAAACCTACATTATCAACAGCGCAAGAGTCGTCTTCTTGAATGAACGGCCACAACCTAGGCCTGGGAAAGGCGTAACAAACACCTGTGAAGTTTGTGAACGCAGTCTCCTTGATTCCTTCCGATTCTGTTCTCTTGGCTGTAAGGTAAAAAAAAAGAGAAACCAGTCTCTTGCAATTTTCTTATCAATGTGGAAGAATTTGGAGAAATTAAATTGTGGGTTTTCTGTGATTGTGGGAACATCGAAGAATTTCGAGAAGAAACGGCGAGTGATGGGATCGGATTCAGAGGATTCATCGTACAGTAGTAATAGTAGCCAAGGGAGAATAATGAAGAACAACAATAAGAACAGAGTTGTGCAGAGTTTCACACCGTCAACGCCACCCCCAACTTTGGTCAGTTACAGAACAGCCAAGCGAAGAAAGGGGATTCCACACAGAGCTCCAATGGGAGGACTCATTATCGAATATTGA

Protein sequence

MGVGCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRRVMGSDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY

Homology

[Close]

BLAST of LsiUNG000330 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.5e-31
Identity = 82/201 (40.80%), Postives = 110/201 (54.73%), Query Frame = 0


Query: 14  PPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDHRAIQIRRSSY 73
           P WL  L  E FFV C +H  + K+E N+ CLDC   +LC  C+  H+ HR +Q+RR  Y
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCT-SLCPHCVPSHRFHRLLQVRRYVY 65

Query: 74  HDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRF 133
           HDV+R+ ++QK++D + VQ Y INSA+VVF+ +RPQ R  KG  N C  C+RSL + +  
Sbjct: 66  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPYIH 125

Query: 134 CSLGCKVK--KKRNQSLAIFLSMWKNLEKLNCGFSVIVGTS-------KNFEKKRRVMGS 193
           CSLGCKV    KR + +  FL   K    L  G   I+            +E  R  +  
Sbjct: 126 CSLGCKVDFVMKRYRDITPFL---KPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVD 185

Query: 194 DSEDSSYSSNSSQGRIMKNNN 206
             E  S+SS SS      NNN
Sbjct: 186 GDESMSWSSASSD-----NNN 197

[Close]

BLAST of LsiUNG000330 vs. ExPASy TrEMBL
Match: A0A5D3E5J1 (Putative zinc-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004540 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115
Identity = 211/244 (86.48%), Postives = 214/244 (87.70%), Query Frame = 0


Query: 4   GCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDH 63
           G P DEDNRWPPWLKPLLRE+FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDH
Sbjct: 5   GSPVDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDH 64

Query: 64  RAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC 123
           RAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC
Sbjct: 65  RAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC 124

Query: 124 ERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRRVMG 183
           ERSLLDSFRFCSLGCK                            IVGTSKN+EKKRRVMG
Sbjct: 125 ERSLLDSFRFCSLGCK----------------------------IVGTSKNYEKKRRVMG 184

Query: 184 SDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGL 243
           SDSEDSSYSSNSSQGRIMKN+NKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGL
Sbjct: 185 SDSEDSSYSSNSSQGRIMKNSNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGL 220

Query: 244 IIEY 248
           IIEY
Sbjct: 245 IIEY 220

[Close]

BLAST of LsiUNG000330 vs. ExPASy TrEMBL
Match: A0A1S3CQ58 (uncharacterized protein LOC103503550 OS=Cucumis melo OX=3656 GN=LOC103503550 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115
Identity = 211/244 (86.48%), Postives = 214/244 (87.70%), Query Frame = 0


Query: 4   GCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDH 63
           G P DEDNRWPPWLKPLLRE+FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDH
Sbjct: 5   GSPVDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDH 64

Query: 64  RAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC 123
           RAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC
Sbjct: 65  RAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC 124

Query: 124 ERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRRVMG 183
           ERSLLDSFRFCSLGCK                            IVGTSKN+EKKRRVMG
Sbjct: 125 ERSLLDSFRFCSLGCK----------------------------IVGTSKNYEKKRRVMG 184

Query: 184 SDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGL 243
           SDSEDSSYSSNSSQGRIMKN+NKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGL
Sbjct: 185 SDSEDSSYSSNSSQGRIMKNSNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGL 220

Query: 244 IIEY 248
           IIEY
Sbjct: 245 IIEY 220

[Close]

BLAST of LsiUNG000330 vs. ExPASy TrEMBL
Match: A0A6J1K1F4 (uncharacterized protein LOC111490843 OS=Cucurbita maxima OX=3661 GN=LOC111490843 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 9.6e-109
Identity = 205/248 (82.66%), Postives = 210/248 (84.68%), Query Frame = 0


Query: 1   MGVGCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFH 60
           MG G PEDEDNRWPPWLKPLLRE FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+H
Sbjct: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRR 180
           EVCERSLLDSFRFCSLGCK                            IVGTSKNFEKK R
Sbjct: 121 EVCERSLLDSFRFCSLGCK----------------------------IVGTSKNFEKKPR 180

Query: 181 VM-GSDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 240
           VM GSDSEDS YSS SSQGR+M N NKN+VVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP
Sbjct: 181 VMVGSDSEDSCYSS-SSQGRVM-NKNKNKVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 218

Query: 241 MGGLIIEY 248
           M GL++EY
Sbjct: 241 MSGLMMEY 218

[Close]

BLAST of LsiUNG000330 vs. ExPASy TrEMBL
Match: A0A6J1ES91 (uncharacterized protein LOC111437323 OS=Cucurbita moschata OX=3662 GN=LOC111437323 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.3e-108
Identity = 206/248 (83.06%), Postives = 209/248 (84.27%), Query Frame = 0


Query: 1   MGVGCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFH 60
           MG G PEDEDNRWPPWLKPLLRE FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+H
Sbjct: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRR 180
           EVCERSLLDSFRFCSLGCK                            IVGTSKNFEKK R
Sbjct: 121 EVCERSLLDSFRFCSLGCK----------------------------IVGTSKNFEKKPR 180

Query: 181 VM-GSDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 240
           VM GSDSEDS YSS SSQGR M N NKN+VVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP
Sbjct: 181 VMGGSDSEDSCYSS-SSQGRAM-NKNKNKVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 218

Query: 241 MGGLIIEY 248
           M GL+IEY
Sbjct: 241 MSGLMIEY 218

[Close]

BLAST of LsiUNG000330 vs. ExPASy TrEMBL
Match: A0A6J1DZX6 (uncharacterized protein LOC111026143 OS=Momordica charantia OX=3673 GN=LOC111026143 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.8e-108
Identity = 199/242 (82.23%), Postives = 208/242 (85.95%), Query Frame = 0


Query: 6   PEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDHRA 65
           P++ED+RWPPWLKPLLRE+FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+HKDHRA
Sbjct: 59  PDEEDHRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRA 118

Query: 66  IQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCER 125
           IQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCER
Sbjct: 119 IQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCER 178

Query: 126 SLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRRVMGSD 185
           SLLDSFRFCSLGCK                            IVGTSKNF KKRR+ GSD
Sbjct: 179 SLLDSFRFCSLGCK----------------------------IVGTSKNFVKKRRMTGSD 238

Query: 186 SEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLII 245
           SEDSSYSS SSQG+ M  NNKN+VVQSFTPSTPPPTLV+YRTAKRRKGIPHRAPMGGLII
Sbjct: 239 SEDSSYSS-SSQGKSMNKNNKNKVVQSFTPSTPPPTLVNYRTAKRRKGIPHRAPMGGLII 271

Query: 246 EY 248
           EY
Sbjct: 299 EY 271

[Close]

BLAST of LsiUNG000330 vs. NCBI nr
Match: XP_038888735.1 (uncharacterized protein LOC120078532 [Benincasa hispida])

HSP 1 Score: 435.3 bits (1118), Expect = 3.6e-118
Identity = 217/248 (87.50%), Postives = 219/248 (88.31%), Query Frame = 0


Query: 1   MGVGCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFH 60
           MGVGCPEDEDNRWPPWLKPLLRE+FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFH
Sbjct: 1   MGVGCPEDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRR 180
           EVCERSLLDSFRFCSLGCK                            IVGTSKNFEKKRR
Sbjct: 121 EVCERSLLDSFRFCSLGCK----------------------------IVGTSKNFEKKRR 180

Query: 181 VMGSDSEDSSY-SSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 240
           VMGSDSEDSSY SS+SSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP
Sbjct: 181 VMGSDSEDSSYSSSSSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 220

Query: 241 MGGLIIEY 248
           MGGLIIEY
Sbjct: 241 MGGLIIEY 220

[Close]

BLAST of LsiUNG000330 vs. NCBI nr
Match: XP_004136189.1 (uncharacterized protein LOC101209912 [Cucumis sativus] >XP_008465982.1 PREDICTED: uncharacterized protein LOC103503550 [Cucumis melo] >KAE8651437.1 hypothetical protein Csa_000726 [Cucumis sativus] >TYK31172.1 putative zinc-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 425.6 bits (1093), Expect = 2.9e-115
Identity = 211/244 (86.48%), Postives = 214/244 (87.70%), Query Frame = 0


Query: 4   GCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDH 63
           G P DEDNRWPPWLKPLLRE+FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDH
Sbjct: 5   GSPVDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDH 64

Query: 64  RAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC 123
           RAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC
Sbjct: 65  RAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC 124

Query: 124 ERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRRVMG 183
           ERSLLDSFRFCSLGCK                            IVGTSKN+EKKRRVMG
Sbjct: 125 ERSLLDSFRFCSLGCK----------------------------IVGTSKNYEKKRRVMG 184

Query: 184 SDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGL 243
           SDSEDSSYSSNSSQGRIMKN+NKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGL
Sbjct: 185 SDSEDSSYSSNSSQGRIMKNSNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGL 220

Query: 244 IIEY 248
           IIEY
Sbjct: 245 IIEY 220

[Close]

BLAST of LsiUNG000330 vs. NCBI nr
Match: XP_022995236.1 (uncharacterized protein LOC111490843 [Cucurbita maxima])

HSP 1 Score: 402.9 bits (1034), Expect = 2.0e-108
Identity = 205/248 (82.66%), Postives = 210/248 (84.68%), Query Frame = 0


Query: 1   MGVGCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFH 60
           MG G PEDEDNRWPPWLKPLLRE FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+H
Sbjct: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRR 180
           EVCERSLLDSFRFCSLGCK                            IVGTSKNFEKK R
Sbjct: 121 EVCERSLLDSFRFCSLGCK----------------------------IVGTSKNFEKKPR 180

Query: 181 VM-GSDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 240
           VM GSDSEDS YSS SSQGR+M N NKN+VVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP
Sbjct: 181 VMVGSDSEDSCYSS-SSQGRVM-NKNKNKVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 218

Query: 241 MGGLIIEY 248
           M GL++EY
Sbjct: 241 MSGLMMEY 218

[Close]

BLAST of LsiUNG000330 vs. NCBI nr
Match: XP_022930997.1 (uncharacterized protein LOC111437323 [Cucurbita moschata] >KAG6606254.1 hypothetical protein SDJN03_03571, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036196.1 hypothetical protein SDJN02_02997 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.5 bits (1033), Expect = 2.6e-108
Identity = 206/248 (83.06%), Postives = 209/248 (84.27%), Query Frame = 0


Query: 1   MGVGCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFH 60
           MG G PEDEDNRWPPWLKPLLRE FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+H
Sbjct: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRR 180
           EVCERSLLDSFRFCSLGCK                            IVGTSKNFEKK R
Sbjct: 121 EVCERSLLDSFRFCSLGCK----------------------------IVGTSKNFEKKPR 180

Query: 181 VM-GSDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 240
           VM GSDSEDS YSS SSQGR M N NKN+VVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP
Sbjct: 181 VMGGSDSEDSCYSS-SSQGRAM-NKNKNKVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 218

Query: 241 MGGLIIEY 248
           M GL+IEY
Sbjct: 241 MSGLMIEY 218

[Close]

BLAST of LsiUNG000330 vs. NCBI nr
Match: XP_022159845.1 (uncharacterized protein LOC111026143, partial [Momordica charantia])

HSP 1 Score: 400.6 bits (1028), Expect = 9.9e-108
Identity = 199/242 (82.23%), Postives = 208/242 (85.95%), Query Frame = 0


Query: 6   PEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDHRA 65
           P++ED+RWPPWLKPLLRE+FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+HKDHRA
Sbjct: 59  PDEEDHRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRA 118

Query: 66  IQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCER 125
           IQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCER
Sbjct: 119 IQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCER 178

Query: 126 SLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRRVMGSD 185
           SLLDSFRFCSLGCK                            IVGTSKNF KKRR+ GSD
Sbjct: 179 SLLDSFRFCSLGCK----------------------------IVGTSKNFVKKRRMTGSD 238

Query: 186 SEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLII 245
           SEDSSYSS SSQG+ M  NNKN+VVQSFTPSTPPPTLV+YRTAKRRKGIPHRAPMGGLII
Sbjct: 239 SEDSSYSS-SSQGKSMNKNNKNKVVQSFTPSTPPPTLVNYRTAKRRKGIPHRAPMGGLII 271

Query: 246 EY 248
           EY
Sbjct: 299 EY 271

[Close]

BLAST of LsiUNG000330 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 305.4 bits (781), Expect = 4.0e-83
Identity = 161/245 (65.71%), Postives = 179/245 (73.06%), Query Frame = 0


Query: 3   VGCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKD 62
           +G  E+ +  +P WLKPLLRE FFVQCK HADSHKSECNMYCLDC NG LCSLCL+FHKD
Sbjct: 1   MGAEEETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKD 60

Query: 63  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 122
           H AIQIRRSSYHDVIRVSEIQK LDITGVQTY+INSA+VVFLNERPQPRPGKGV NTCEV
Sbjct: 61  HHAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEV 120

Query: 123 CERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRRVM 182
           C RSL+DSFRFCSLGCK+                             G SK   K+    
Sbjct: 121 CYRSLVDSFRFCSLGCKIS----------------------------GISKKKRKEWTNN 180

Query: 183 GSDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGG 242
            SDS+D SYSS +S GR+ KN+  + +  SFTPSTPP + V+ R AKRRKGIPHRAP GG
Sbjct: 181 LSDSDD-SYSS-TSIGRLKKND--DIMNNSFTPSTPPLSAVNRRIAKRRKGIPHRAPFGG 213

Query: 243 LIIEY 248
           LIIEY
Sbjct: 241 LIIEY 213

[Close]

BLAST of LsiUNG000330 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 299.3 bits (765), Expect = 2.9e-81
Identity = 156/243 (64.20%), Postives = 176/243 (72.43%), Query Frame = 0


Query: 1   MGVGCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFH 60
           MG G PE+E+NRWPPWLKPLL+E FFV CKFH DSHKSECNMYCLDC NG LCSLCLA H
Sbjct: 21  MGAGGPEEEENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHH 80

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHR IQIRRSSYHDVIRV+EIQK LDI G+QTY+INSA+VVFLNERPQPRPGKGVTNTC
Sbjct: 81  KDHRTIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTC 140

Query: 121 EVCERSLL-DSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKR 180
           +VC RSL+ DSFRFCSLGCK                            I GTS+ FEK R
Sbjct: 141 KVCYRSLVDDSFRFCSLGCK----------------------------IAGTSRGFEKGR 200

Query: 181 RVMGSDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVS-YRTAKRRKGIPHRA 240
             +  ++EDS  SS+ + G+ + N      +QSF+PSTPP T  S  R  KRRKGIPHR+
Sbjct: 201 ENLLMETEDS--SSSIAIGKNITN------LQSFSPSTPPLTTSSNCRIVKRRKGIPHRS 227

Query: 241 PMG 242
           PMG
Sbjct: 261 PMG 227

[Close]

BLAST of LsiUNG000330 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein )

HSP 1 Score: 241.9 bits (616), Expect = 5.5e-64
Identity = 134/206 (65.05%), Postives = 148/206 (71.84%), Query Frame = 0


Query: 42  MYCLDCMNGALCSLCLAFHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARV 101
           MYCLDC NG LCSLCL+FHKDH AIQIRRSSYHDVIRVSEIQK LDITGVQTY+INSA+V
Sbjct: 1   MYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKV 60

Query: 102 VFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKL 161
           VFLNERPQPRPGKGV NTCEVC RSL+DSFRFCSLGCK+                     
Sbjct: 61  VFLNERPQPRPGKGVINTCEVCYRSLVDSFRFCSLGCKIS-------------------- 120

Query: 162 NCGFSVIVGTSKNFEKKRRVMGSDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPT 221
                   G SK   K+     SDS+D SYSS +S GR+ KN+  + +  SFTPSTPP +
Sbjct: 121 --------GISKKKRKEWTNNLSDSDD-SYSS-TSIGRLKKND--DIMNNSFTPSTPPLS 174

Query: 222 LVSYRTAKRRKGIPHRAPMGGLIIEY 248
            V+ R AKRRKGIPHRAP GGLIIEY
Sbjct: 181 AVNRRIAKRRKGIPHRAPFGGLIIEY 174

[Close]

BLAST of LsiUNG000330 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-61
Identity = 122/239 (51.05%), Postives = 154/239 (64.44%), Query Frame = 0


Query: 7   EDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDHRAI 66
           E+ED   PPWL P+LR ++FV C  H DS+K+ECN++CLDC   A CS CL  HKDHR +
Sbjct: 9   EEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVV 68

Query: 67  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 126
           QIRRSSYH+V+RV+EIQK +DI  VQTYIINSA++VFLNERPQPR GKGVTNTCE+C RS
Sbjct: 69  QIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRS 128

Query: 127 LLDSFRFCSLGCKVKKKRNQSLAIFLSM--WKNLEKLNCGFSVIVGTSKNFEK----KRR 186
           LLDSFRFCSLGCK+   R   L++  S+      E L    S    T     K     R 
Sbjct: 129 LLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRL 188

Query: 187 VMGSDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 240
           + G       +      G    +++ +    SF+P TPP  + ++R + RRKG+PHRAP
Sbjct: 189 MSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP--IYNHRNSSRRKGVPHRAP 245

[Close]

BLAST of LsiUNG000330 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein )

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-61
Identity = 122/239 (51.05%), Postives = 154/239 (64.44%), Query Frame = 0


Query: 7   EDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDHRAI 66
           E+ED   PPWL P+LR ++FV C  H DS+K+ECN++CLDC   A CS CL  HKDHR +
Sbjct: 6   EEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVV 65

Query: 67  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 126
           QIRRSSYH+V+RV+EIQK +DI  VQTYIINSA++VFLNERPQPR GKGVTNTCE+C RS
Sbjct: 66  QIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRS 125

Query: 127 LLDSFRFCSLGCKVKKKRNQSLAIFLSM--WKNLEKLNCGFSVIVGTSKNFEK----KRR 186
           LLDSFRFCSLGCK+   R   L++  S+      E L    S    T     K     R 
Sbjct: 126 LLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRL 185

Query: 187 VMGSDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAP 240
           + G       +      G    +++ +    SF+P TPP  + ++R + RRKG+PHRAP
Sbjct: 186 MSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP--IYNHRNSSRRKGVPHRAP 242

The following BLAST results are available for this feature:

BLAST of LsiUNG000330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	4.5e-31	40.80	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of LsiUNG000330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5J1	1.4e-115	86.48	Putative zinc-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CQ58	1.4e-115	86.48	uncharacterized protein LOC103503550 OS=Cucumis melo OX=3656 GN=LOC103503550 PE=...	[more]
A0A6J1K1F4	9.6e-109	82.66	uncharacterized protein LOC111490843 OS=Cucurbita maxima OX=3661 GN=LOC111490843...	[more]
A0A6J1ES91	1.3e-108	83.06	uncharacterized protein LOC111437323 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1DZX6	4.8e-108	82.23	uncharacterized protein LOC111026143 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]

BLAST of LsiUNG000330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888735.1	3.6e-118	87.50	uncharacterized protein LOC120078532 [Benincasa hispida]	[more]
XP_004136189.1	2.9e-115	86.48	uncharacterized protein LOC101209912 [Cucumis sativus] >XP_008465982.1 PREDICTED...	[more]
XP_022995236.1	2.0e-108	82.66	uncharacterized protein LOC111490843 [Cucurbita maxima]	[more]
XP_022930997.1	2.6e-108	83.06	uncharacterized protein LOC111437323 [Cucurbita moschata] >KAG6606254.1 hypothet...	[more]
XP_022159845.1	9.9e-108	82.23	uncharacterized protein LOC111026143, partial [Momordica charantia]	[more]

BLAST of LsiUNG000330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32700.1	4.0e-83	65.71	PLATZ transcription factor family protein	[more]
AT4G17900.1	2.9e-81	64.20	PLATZ transcription factor family protein	[more]
AT1G32700.2	5.5e-64	65.05	PLATZ transcription factor family protein	[more]
AT1G21000.1	1.1e-61	51.05	PLATZ transcription factor family protein	[more]
AT1G21000.2	1.1e-61	51.05	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 69..140 e-value: 3.7E-30 score: 104.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..223
None	No IPR available	PANTHER	PTHR31065:SF57	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 167..243 coord: 7..141
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 167..243
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 7..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
LsiUNG000330.1	LsiUNG000330.1	mRNA