Lsi11G017180 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G017180
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Rab family
Location	chr11: 25265292 .. 25268952 (+)
RNA-Seq Expression	Lsi11G017180
Synteny	Lsi11G017180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAAATTCACTGTTCTTTGCCTTTGCTAATGACCTTTTACTTTTCCATAGGTTCCCGAACAAAGACCCCCACTAAAACTAAGAGAAAAAGTTTACTCTTTATATATATATAATTACTTTTAGCTTCCTTTCATTGTGGGTATTCCAAAATTTCTTCGGTTTCGAAGAACGAAGTGGGAAGTCTAGAGGAAGAGTCTTATGGCGGGTTATAAAGGTCATGATGAATATGATTACCTGTTTAAGCTTGTTTTGATCGGTGATTCTGGGGTGGGCAAATCAAATTTGCTCTCCAGGTTTACAAGGAACCAATTTAATTTAGAATCCAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTAGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGACACTGCTGGACAAGAAAGGTTTGGTTCTTCGTTCTTCTTTTTTTGAAGTTCCAATCGATTTTAGTTTCAAGTCAACTAAATTTATGGTATCTCTCAAAATTCCTATTACAGTTGCATGATTTCTTTGTTAATCAATCGCTTCTCTGCCAGAATATTGTTTGTATCAATTGAATATGAATCATATCGATATATCTTACATTTACTTAAAATTTGTTTGGATGGTTCTTTTTGGACAGCCTTTTACCTTTAATTTGTGATTAAAGAAAGTGGGAGGGTTGGATTATTTGTGGACTAAATCATAAGATATGAGGCAAAGGAAGGCTTCCCTTGATTTTACTGGCATCGTGTATAATCTGATGGTCATGTAGAATCTGGTTCTCTACAAGGGAAAATTGATATTTAGTTAAGTTTCATGCGTTGACGAAGTGCTCTGTTTTCCCCTTCACTACTTGTTTGTATGCTTGGAGCTTGATTGTGATTACTGTAGCTTAAGGCTAGAATGTTTTTTAATCAATTAGCACTGATTGAAAATTAGTCTTATCATGAAGGAGGTTTATCCTTGGAAATCTGGTGGCTTTAAAATTTTAGTTTATCTTTTTTAACAGACTTTGTAATTACTACTGAAGAATGAAGAATGAAATTTCTGTTGAAGTATTGATATAATTAAACTTACCATAATCCGTCACCTTAAGCTTTGAGTTCATCGTTGACATGGTATTAGAGCAGGAGATCTTTTGTTAGAACCTATGTAATGCCTTTTCTTCTCTCAAAATTAATTTTGATTTCCACTTATTGGACATTCTGCAAATTTCTAAGCCCACAAGTAAGGACTGTTGACTGTTGACTGTTGATATGTTCAAATTTACAGTAATCTATTAGCTCAAGTCATTGGGTCCATTGGTGATTTAACAATTTCTATTGGGAATTATGAGTGCGTTTCTGGGTTTTGTTAGTACTTGTTCTAGTTTTTACTTGCTTGTCAGTTGTCTTGGAAGAAATTGTGGTAAGAGTCTGCATCATTGTATAGAAATTGAGCATTTCAGATAAATTTTCTAGAAATAAGGAATTGTTCTATTTCCTCTTGAATTGGTATTCTAAGGGCCCGTTTGAAATAGGAAACGAGAATGTCATCAAACGGGCCCTAAGTGTCCCGATCAAATGAAGGCACTGTAGACTACTTTTCTTGTTTTCCTGAAAAAAATTCTCATCGGTTCAACATCCATACTGCCTTCCTCATAGTTATGGGTCACAATATATACAATGGTCTAGAGTGATCTTAGAATTGTAGCGTAGTTCAAACTTCAAGGCTTTTCTTTACTGAACTTTAATGCTGTTGGAGTTTAAACAGTGACTAGAATCAGAAACCATTTATTGAAATGTGCAGAAGCTGGCAACCAATGGTTTCTATATTTGTGCAAAAGTTCTGTAGGTCCATTAGAATAACGAGCACAAACAATTGTGTGAACTGTTTGTGATATACTCGATATATAAAATAAATCTGGGTAGTTCCTTGGTATGGACATGCTGAAGCTGACATCCAAGGATTAGTTATTACATTAGTATGGGCTAGGAGTATTGAACACAAGTAATTGTTTGAACTCTAAGTTAGTCTTTTACTTGCCTTATATATCATATAAATCATAGGACATGTGTTATGCTGTGCTCAACTTACCCTGGTTAGTCATTTGTTGTTTTCTTTCCTACCTCAAGTTTTCCTAATTGAGGATTGAAATTCTCTTTGTTCGTAATAATGATTTTCATGTTTTACCTTTTGCCAGAGTTTTTTATCCCCTTTTCTTTTTGGATGAGATTGTTTTTCCATAGTTCAGAACGATGCAAGTGTGGAACTATAACTGTTCCTGAGATTTTCCACTGTTCAAAGACGTTAATCCAAATCCAATGGGTTGGTAGGTGGTGTGGGGTGGATTACAAAAGTCTATGCTTTTGGATGTTCTCGTCCATTTTGTTGTATTCATATGAATAGAAATATAGAATTTTTCTCAATTTGCTTGCCACCGCAAAAGGGTTAAACAACTCCCAACTTGTAATTTCCATTATAATTTTAATTGCTCAACTAGCCAAACCTTGGGTCCACTTGACTGAGCCTTGGCTTCATCTCTTCTACTTGGCATTTTTTTGCCCTACCATGCAACTCAATAAGGGCCTCTTTGGGAATTTTCCTTTGATGGCTTCGTTTTTTTATTTTTGTATGAGAATAAAGGCCTCCTTGGAATGACTTTTCACAAACAACTCCTTAGTCTTAAATCATTTGGCGCTATGTTTGTTATTGAAGTTTGTATGATTTACATTCATATAAAAGTTGTCGATGCCAGAGCTGATTTGGATTTTGGCGAGGATATTATTATGATATGGGCGTACTCTCATACCTTTTTGGATTTATAGTTGTAACTTCAAAGCTCTTTTTTTGCTTCATTCGATTCAGATCGACTCTTTCATTGTAGGTACCGAGCAATAACCAGTGCTTACTACCGAGGGGCAGTAGGTGCTTTGCTTGTGTATGATGTCACTCGACGTCCAACATTTGAAAATGCTGCAAGATGGTTAAAGGAATTGAGAGATCACACAGACCCAAACATGGTGGTGATGCTCATTGGCAACAAATGTGATTTACGACACCTTATTCTTGTTCCAACAGAAGATGGAAAATCATTTGCTGAAAGGGAGTCATTATACTTCATGGAGACCTCTGCTCTGGATGCAACAAATGTTGAAAGCGCTTTCACGGAGGTGCTATCTCAAATATATCGAATCGTAAGCAAGAGATCAGTCGAGGTAGGCGATAGCGGAAGTGCTTCTACGACCCTCCCGGCAAAAGGTCAGACAATAGATGTCAAGGATGAGGCGTCAGTTCTGAAGAGGATTGGATGTTGTTCCAGGTGAGATAAATAAGCTTCAAAGCCTTAACTTGGAAATACAGCAAGCGATATTTCTTTTGTATATTTGTATTGTATCACTTTCTGTAGAATAAGAGCTTGGTTGTGGGTGGTGGTTGTTTGAAAGGGAAAATCTCTTCTTCATGTTATAGTCCCTCCATTAAGTGTGGAGTTTGCTCTTCTTTATATTCGAACATTTGAAGCTTCAAATTTTACCGTTGTAGTGTCTACTCTTTAATATCAAACCTCCAAAACGAAAAAAGAGATCATAACTTTGTATATATCGTTCCAATTACTCCCATGTATATTTCAATTAAGCTTTAATTATGCCTCTCCATTTTCAAAAGTTTCATTTTCATTTTTATC

mRNA sequence

TTCAAATTCACTGTTCTTTGCCTTTGCTAATGACCTTTTACTTTTCCATAGGTTCCCGAACAAAGACCCCCACTAAAACTAAGAGAAAAAGTTTACTCTTTATATATATATAATTACTTTTAGCTTCCTTTCATTGTGGGTATTCCAAAATTTCTTCGGTTTCGAAGAACGAAGTGGGAAGTCTAGAGGAAGAGTCTTATGGCGGGTTATAAAGGTCATGATGAATATGATTACCTGTTTAAGCTTGTTTTGATCGGTGATTCTGGGGTGGGCAAATCAAATTTGCTCTCCAGGTTTACAAGGAACCAATTTAATTTAGAATCCAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTAGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGACACTGCTGGACAAGAAAGGTACCGAGCAATAACCAGTGCTTACTACCGAGGGGCAGTAGGTGCTTTGCTTGTGTATGATGTCACTCGACGTCCAACATTTGAAAATGCTGCAAGATGGTTAAAGGAATTGAGAGATCACACAGACCCAAACATGGTGGTGATGCTCATTGGCAACAAATGTGATTTACGACACCTTATTCTTGTTCCAACAGAAGATGGAAAATCATTTGCTGAAAGGGAGTCATTATACTTCATGGAGACCTCTGCTCTGGATGCAACAAATGTTGAAAGCGCTTTCACGGAGGTGCTATCTCAAATATATCGAATCGTAAGCAAGAGATCAGTCGAGGTAGGCGATAGCGGAAGTGCTTCTACGACCCTCCCGGCAAAAGGTCAGACAATAGATGTCAAGGATGAGGCGTCAGTTCTGAAGAGGATTGGATGTTGTTCCAGGTGAGATAAATAAGCTTCAAAGCCTTAACTTGGAAATACAGCAAGCGATATTTCTTTTGTATATTTGTATTGTATCACTTTCTGTAGAATAAGAGCTTGGTTGTGGGTGGTGGTTGTTTGAAAGGGAAAATCTCTTCTTCATGTTATAGTCCCTCCATTAAGTGTGGAGTTTGCTCTTCTTTATATTCGAACATTTGAAGCTTCAAATTTTACCGTTGTAGTGTCTACTCTTTAATATCAAACCTCCAAAACGAAAAAAGAGATCATAACTTTGTATATATCGTTCCAATTACTCCCATGTATATTTCAATTAAGCTTTAATTATGCCTCTCCATTTTCAAAAGTTTCATTTTCATTTTTATC

Coding sequence (CDS)

ATGGCGGGTTATAAAGGTCATGATGAATATGATTACCTGTTTAAGCTTGTTTTGATCGGTGATTCTGGGGTGGGCAAATCAAATTTGCTCTCCAGGTTTACAAGGAACCAATTTAATTTAGAATCCAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTAGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGACACTGCTGGACAAGAAAGGTACCGAGCAATAACCAGTGCTTACTACCGAGGGGCAGTAGGTGCTTTGCTTGTGTATGATGTCACTCGACGTCCAACATTTGAAAATGCTGCAAGATGGTTAAAGGAATTGAGAGATCACACAGACCCAAACATGGTGGTGATGCTCATTGGCAACAAATGTGATTTACGACACCTTATTCTTGTTCCAACAGAAGATGGAAAATCATTTGCTGAAAGGGAGTCATTATACTTCATGGAGACCTCTGCTCTGGATGCAACAAATGTTGAAAGCGCTTTCACGGAGGTGCTATCTCAAATATATCGAATCGTAAGCAAGAGATCAGTCGAGGTAGGCGATAGCGGAAGTGCTTCTACGACCCTCCCGGCAAAAGGTCAGACAATAGATGTCAAGGATGAGGCGTCAGTTCTGAAGAGGATTGGATGTTGTTCCAGGTGA

Protein sequence

MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVVMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKRSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCSR

Homology

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BLAST of Lsi11G017180 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 4.7e-104
Identity = 188/218 (86.24%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           M GY+  DEYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+L +D K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNK DLRHL+ VPTEDGKSFAERESLYFMETSAL+ATNVE+AFTEVL+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           R+VE GDSGS S+ LP+KGQTI+VK+++SVLKR GCCS
Sbjct: 181 RAVEAGDSGS-SSGLPSKGQTINVKEDSSVLKRFGCCS 217

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BLAST of Lsi11G017180 vs. ExPASy Swiss-Prot
Match: Q40195 (Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.2e-98
Identity = 181/218 (83.03%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYK  DEYDYLFKLVLIGDSGVGKSNLLSRFTRN+FNLESKSTIGVEFATKSL IDGK
Sbjct: 1   MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFE A RWLKELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNK DLRHL+ V TEDGK+FAE+ESLYFMETSAL+ATNVE+AF+EVL+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           R+VE GD  S S  +P++GQTI+V +++SVL R  CCS
Sbjct: 181 RAVEAGDRPSTS-VVPSQGQTINVNEDSSVLNRYRCCS 217

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BLAST of Lsi11G017180 vs. ExPASy Swiss-Prot
Match: P28185 (Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 8.5e-98
Identity = 175/218 (80.28%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  +EYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+ +++GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTR  TFENAARWL+ELR HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHL+ V TE+ K+FAERESLYFMETSALDATNVE+AFTEVL+QI++IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSV   D G  S  LP KG+TI+VK++ SVLKR+GCCS
Sbjct: 181 RSV---DGGGESADLPGKGETINVKEDGSVLKRMGCCS 215

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BLAST of Lsi11G017180 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-95
Identity = 173/218 (79.36%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  DEYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATKSL ID K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  T+EN  RWLKELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNK DLRHL+ V T++ K  AERE LYFMETSAL+ATNVE+AFTE L+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           ++VE GD G A+++ P KG+TI++KDE S  K+ GCCS
Sbjct: 181 KAVEAGDEG-ATSSAPPKGETINIKDEGSSWKKFGCCS 217

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BLAST of Lsi11G017180 vs. ExPASy Swiss-Prot
Match: P40393 (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 SV=2)

HSP 1 Score: 347.4 bits (890), Expect = 1.2e-94
Identity = 168/217 (77.42%), Postives = 194/217 (89.40%), Query Frame = 0


Query: 2   AGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKV 61
           AGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+SL++DGKV
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 62  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVV 121
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN  RWLKELRDHTDPN+VV
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122

Query: 122 MLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKR 181
           ML+GNK DLRHL+ V T++GK+FAERESLYFMETSAL++TNVE+AF EVL+QIYRIVSKR
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182

Query: 182 SVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           SVE GD   +    P KG+ I++KD+ S +K+ GCCS
Sbjct: 183 SVEAGDDAGSG---PGKGEKINIKDDVSAVKKGGCCS 216

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BLAST of Lsi11G017180 vs. ExPASy TrEMBL
Match: A0A0A0K737 (Small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G049180 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115
Identity = 213/218 (97.71%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSVE GD GSASTTLP+KGQTIDVKD++SVLKRIGCCS
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCS 218

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BLAST of Lsi11G017180 vs. ExPASy TrEMBL
Match: A0A5A7SMX1 (Ras-related protein Rab11D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003220 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 8.0e-115
Identity = 212/218 (97.25%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSVE GD GSAS TLP+KGQTIDVKD++SVLKRIGCCS
Sbjct: 181 RSVEAGDIGSASMTLPSKGQTIDVKDDSSVLKRIGCCS 218

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BLAST of Lsi11G017180 vs. ExPASy TrEMBL
Match: A0A1S3C059 (ras-related protein Rab11D OS=Cucumis melo OX=3656 GN=LOC103495492 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.7e-114
Identity = 210/218 (96.33%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELR+HTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRNHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHL+LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLVLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSVE GD GSAS TLP KGQTIDVKD++SVLKRIGCCS
Sbjct: 181 RSVEAGDIGSASMTLPPKGQTIDVKDDSSVLKRIGCCS 218

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BLAST of Lsi11G017180 vs. ExPASy TrEMBL
Match: A0A6J1GMB1 (ras-related protein Rab11D-like OS=Cucurbita moschata OX=3662 GN=LOC111455574 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.8e-112
Identity = 206/218 (94.50%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDG+SFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGQSFAERESLYFMETSALDATNVETAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSVE  DSGSAS TLP KGQTIDVKD++S+L+RIGCCS
Sbjct: 181 RSVEASDSGSASVTLPTKGQTIDVKDDSSILRRIGCCS 218

[Close]

BLAST of Lsi11G017180 vs. ExPASy TrEMBL
Match: A0A6J1I228 (ras-related protein Rab11D-like OS=Cucurbita maxima OX=3661 GN=LOC111468314 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 204/218 (93.58%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDG+SFAERESLYFMETSALDATNVE+AFTEVL+QIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGQSFAERESLYFMETSALDATNVETAFTEVLNQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSVE  DSGSAS TLP+KG+TIDVKD++S+L+RIGCCS
Sbjct: 181 RSVEASDSGSASVTLPSKGKTIDVKDDSSILRRIGCCS 218

[Close]

BLAST of Lsi11G017180 vs. NCBI nr
Match: XP_004136835.1 (ras-related protein Rab11D [Cucumis sativus] >KGN43636.1 hypothetical protein Csa_017337 [Cucumis sativus])

HSP 1 Score: 425.2 bits (1092), Expect = 3.3e-115
Identity = 213/218 (97.71%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSVE GD GSASTTLP+KGQTIDVKD++SVLKRIGCCS
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCS 218

[Close]

BLAST of Lsi11G017180 vs. NCBI nr
Match: KAA0031553.1 (ras-related protein Rab11D [Cucumis melo var. makuwa] >TYK07006.1 ras-related protein Rab11D [Cucumis melo var. makuwa])

HSP 1 Score: 422.9 bits (1086), Expect = 1.6e-114
Identity = 212/218 (97.25%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSVE GD GSAS TLP+KGQTIDVKD++SVLKRIGCCS
Sbjct: 181 RSVEAGDIGSASMTLPSKGQTIDVKDDSSVLKRIGCCS 218

[Close]

BLAST of Lsi11G017180 vs. NCBI nr
Match: XP_038888615.1 (ras-related protein Rab11D [Benincasa hispida])

HSP 1 Score: 419.9 bits (1078), Expect = 1.4e-113
Identity = 210/218 (96.33%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYK HDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKAHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIV K
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVCK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSVE GD GSASTTLPA+GQTIDVKD++SVLKRIGCCS
Sbjct: 181 RSVETGDIGSASTTLPARGQTIDVKDDSSVLKRIGCCS 218

[Close]

BLAST of Lsi11G017180 vs. NCBI nr
Match: XP_008455291.1 (PREDICTED: ras-related protein Rab11D [Cucumis melo])

HSP 1 Score: 419.9 bits (1078), Expect = 1.4e-113
Identity = 210/218 (96.33%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELR+HTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRNHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHL+LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLVLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSVE GD GSAS TLP KGQTIDVKD++SVLKRIGCCS
Sbjct: 181 RSVEAGDIGSASMTLPPKGQTIDVKDDSSVLKRIGCCS 218

[Close]

BLAST of Lsi11G017180 vs. NCBI nr
Match: XP_022953053.1 (ras-related protein Rab11D-like [Cucurbita moschata] >KAG6572383.1 Ras-related protein Rab11D, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011988.1 Ras-related protein Rab11D [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414.5 bits (1064), Expect = 5.8e-112
Identity = 206/218 (94.50%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDG+SFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGQSFAERESLYFMETSALDATNVETAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSVE  DSGSAS TLP KGQTIDVKD++S+L+RIGCCS
Sbjct: 181 RSVEASDSGSASVTLPTKGQTIDVKDDSSILRRIGCCS 218

[Close]

BLAST of Lsi11G017180 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 357.8 bits (917), Expect = 6.1e-99
Identity = 175/218 (80.28%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  +EYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+ +++GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTR  TFENAARWL+ELR HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHL+ V TE+ K+FAERESLYFMETSALDATNVE+AFTEVL+QI++IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           RSV   D G  S  LP KG+TI+VK++ SVLKR+GCCS
Sbjct: 181 RSV---DGGGESADLPGKGETINVKEDGSVLKRMGCCS 215

[Close]

BLAST of Lsi11G017180 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 345.9 bits (886), Expect = 2.4e-95
Identity = 168/218 (77.06%), Postives = 196/218 (89.91%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFAT++L++DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFEN  RWLKEL++HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VML+GNK DLRHL+ VPTEDGKS+AE+ESL FMETSAL+ATNVE AF EVL+QIYRI SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           + VE G+ G+AS     KG+ I+VK++ S LK++GCCS
Sbjct: 181 KQVEAGEDGNASV---PKGEKIEVKNDVSALKKLGCCS 215

[Close]

BLAST of Lsi11G017180 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 330.9 bits (847), Expect = 7.9e-91
Identity = 163/218 (74.77%), Postives = 191/218 (87.61%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+SL ++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN  RWL+ELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VML+GNK DLRHL+ V TED KSFAE ESLYFMETSAL++TNVE+AF+EVL+QIY +VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           +++E G+    S  +P+KG+ IDV  + S +K+ GCCS
Sbjct: 181 KAMEAGED---SGNVPSKGEKIDV--DVSAVKKTGCCS 213

[Close]

BLAST of Lsi11G017180 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 330.9 bits (847), Expect = 7.9e-91
Identity = 163/218 (74.77%), Postives = 189/218 (86.70%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  DEYDYLFK+VLIGDSGVGKSNLLSRFT+N+F+LESKSTIGVEFAT+SL +D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN   WLKELR+HTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VML+GNK DLRHL+ V TED KSFAE+ESLYFMETSAL+ATNVE+AF EVL+QI+ IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDVKDEASVLKRIGCCS 219
           +++E   + S S  +P+KG  ID+  + S +K+ GCCS
Sbjct: 181 KAME---AASESANVPSKGDKIDIGKDVSAVKKGGCCS 215

[Close]

BLAST of Lsi11G017180 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 327.4 bits (838), Expect = 8.8e-90
Identity = 161/220 (73.18%), Postives = 192/220 (87.27%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MA Y+  DEYDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+S+ +D K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN  RWLKELRDHTD N+V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           +M +GNK DLRHL  V TED K+FAERE+ +FMETSAL++ NVE+AFTEVLSQIYR+VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 RSVEVGDSGSASTTLPAKGQTIDV--KDEASVLKRIGCCS 219
           +++++GD  +A   LP KGQTI+V  KD+ S +K++GCCS
Sbjct: 181 KALDIGDDPAA---LP-KGQTINVGSKDDVSAVKKVGCCS 216

The following BLAST results are available for this feature:

BLAST of Lsi11G017180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40194	4.7e-104	86.24	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q40195	2.2e-98	83.03	Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1	[more]
P28185	8.5e-98	80.28	Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1	[more]
Q01111	1.0e-95	79.36	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
P40393	1.2e-94	77.42	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 S...	[more]

BLAST of Lsi11G017180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K737	1.6e-115	97.71	Small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G049180 PE=4 SV=1	[more]
A0A5A7SMX1	8.0e-115	97.25	Ras-related protein Rab11D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3C059	6.7e-114	96.33	ras-related protein Rab11D OS=Cucumis melo OX=3656 GN=LOC103495492 PE=4 SV=1	[more]
A0A6J1GMB1	2.8e-112	94.50	ras-related protein Rab11D-like OS=Cucurbita moschata OX=3662 GN=LOC111455574 PE...	[more]
A0A6J1I228	1.4e-111	93.58	ras-related protein Rab11D-like OS=Cucurbita maxima OX=3661 GN=LOC111468314 PE=4...	[more]

BLAST of Lsi11G017180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136835.1	3.3e-115	97.71	ras-related protein Rab11D [Cucumis sativus] >KGN43636.1 hypothetical protein Cs...	[more]
KAA0031553.1	1.6e-114	97.25	ras-related protein Rab11D [Cucumis melo var. makuwa] >TYK07006.1 ras-related pr...	[more]
XP_038888615.1	1.4e-113	96.33	ras-related protein Rab11D [Benincasa hispida]	[more]
XP_008455291.1	1.4e-113	96.33	PREDICTED: ras-related protein Rab11D [Cucumis melo]	[more]
XP_022953053.1	5.8e-112	94.50	ras-related protein Rab11D-like [Cucurbita moschata] >KAG6572383.1 Ras-related p...	[more]

BLAST of Lsi11G017180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06400.1	6.1e-99	80.28	Ras-related small GTP-binding family protein	[more]
AT1G16920.1	2.4e-95	77.06	RAB GTPase homolog A1B	[more]
AT4G18800.1	7.9e-91	74.77	RAB GTPase homolog A1D	[more]
AT5G45750.1	7.9e-91	74.77	RAB GTPase homolog A1C	[more]
AT5G60860.1	8.8e-90	73.18	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 152..174 score: 41.19 coord: 14..35 score: 56.68 coord: 55..77 score: 55.43 coord: 117..130 score: 50.41 coord: 37..53 score: 35.85
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 1.7E-26 score: 104.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 2.6E-110 score: 382.5
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..211 e-value: 1.1E-4 score: 17.8
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..218
None	No IPR available	PANTHER	PTHR47979:SF27	RAS-RELATED PROTEIN RIC2	coord: 1..218
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..217 score: 35.401577
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..178 score: 9.554386
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 3.09007E-127 score: 354.174
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 4.6E-12 score: 34.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 7.1E-61 score: 204.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 8..211 score: 16.242884
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..217 e-value: 6.5E-70 score: 236.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..184
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 2.3E-38 score: 129.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G017180.1	Lsi11G017180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding