Homology
BLAST of Lsi11G017140 vs. ExPASy Swiss-Prot
Match:
Q8S9M4 (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H29 PE=2 SV=2)
HSP 1 Score: 711.4 bits (1835), Expect = 8.9e-204
Identity = 366/634 (57.73%), Postives = 452/634 (71.29%), Query Frame = 0
Query: 17 SFTVRLLSTKTPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDPSLFSHLLQSCIKLGSLF 76
S VR LS +A +LC+ G +R+A+ F+ I+++ SLF+ +QSC SL
Sbjct: 6 SSVVRPLSVDPATA----IATLCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLP 65
Query: 77 GGKQVHSLL--------------------------------------------------- 136
GKQ+H LL
Sbjct: 66 SGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYV 125
Query: 137 --RDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFKEMYGLGILPDEFTLGS 196
DL NA+K+FDEM +R + TWNAMI GL QFEFNE+ +SLF+EM+GLG PDE+TLGS
Sbjct: 126 RAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGS 185
Query: 197 VLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRN 256
V G AGLRS+ GQ++H +K G EL+LVV SSLAHMYM++G L DGE +I+SMP+RN
Sbjct: 186 VFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRN 245
Query: 257 VVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVISACSELATLAQGQQIHA 316
+VAWNTLI G AQ+GC E VL Y MMKI+G RP+KITFV+V+S+CS+LA QGQQIHA
Sbjct: 246 LVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHA 305
Query: 317 EVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVLWSAMIAAYGFHGRGEE 376
E IK GA SVVAVVSSLISMYS+ GCL D+ KAF +RED D V+WS+MI+AYGFHG+G+E
Sbjct: 306 EAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDE 365
Query: 377 AIKLFHLM-EDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVKKYKLKPRIEHYTCV 436
AI+LF+ M E ME NEV FL+LLYACSH GLK+KG E D+MV+KY KP ++HYTCV
Sbjct: 366 AIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV 425
Query: 437 VDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDA 496
VDLLGRAG L++AE +IRSMP+K D +IWKTLLSAC +HKNAEMA+R+ +EIL++DP D+
Sbjct: 426 VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDS 485
Query: 497 ASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNVVHQFSMGDKSHPQYL 556
A YVLL+N+HASAK W DVSE+RK+MRD+NV+KE GISWFE K VHQF MGD+S +
Sbjct: 486 ACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSK 545
Query: 557 EIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKLAIAFALINTPESIPI 597
EI SYLKEL E+KL GY PD SVLHDMD EEKE +L HSEKLA+AFAL+ PE PI
Sbjct: 546 EIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPI 605
BLAST of Lsi11G017140 vs. ExPASy Swiss-Prot
Match:
Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 428.7 bits (1101), Expect = 1.2e-118
Identity = 217/536 (40.49%), Postives = 324/536 (60.45%), Query Frame = 0
Query: 63 SHLLQSCIKLGSLFGGK--QVHSLLRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNE 122
+H+LQS + + G +++ LE A+K+F++M +R+ TW +I+G +Q +
Sbjct: 84 AHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPC 143
Query: 123 QAISLFKEMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLA 182
A+ F +M G P+EFTL SV++ A R G ++H +KCGF+ N+ VGS+L
Sbjct: 144 DALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALL 203
Query: 183 HMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKI 242
+Y + G + D + + ++ RN V+WN LIAG A+ +E+ L + M GFRP
Sbjct: 204 DLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHF 263
Query: 243 TFVSVISACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDR 302
++ S+ ACS L QG+ +HA +IK+G V ++L+ MY++SG + D+ K F
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 303 EDSDVVLWSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGT 362
DVV W++++ AY HG G+EA+ F M + + NE++FLS+L ACSH GL ++G
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 363 EYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKL 422
Y +LM KK + P HY VVDLLGRAG L A I MP++ IWK LL+AC++
Sbjct: 384 HYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 443
Query: 423 HKNAEMAKRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGIS 482
HKN E+ +E + +LDP D +V+L NI+AS W D + +RK M++ V+KEP S
Sbjct: 444 HKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 503
Query: 483 WFELKNVVHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNL 542
W E++N +H F D+ HPQ EI +E++ ++K GYVPD V+ +D +E+E NL
Sbjct: 504 WVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNL 563
Query: 543 AHHSEKLAIAFALINTPESIPIRVMKNLRVCNDCHNAIKCISKIRNREIIKTKGNQ 597
+HSEK+A+AFAL+NTP I + KN+RVC DCH AIK SK+ REII N+
Sbjct: 564 QYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNR 618
BLAST of Lsi11G017140 vs. ExPASy Swiss-Prot
Match:
Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 426.4 bits (1095), Expect = 5.7e-118
Identity = 221/573 (38.57%), Postives = 338/573 (58.99%), Query Frame = 0
Query: 44 IRQAYDTFK----SEIWSDPSLFSHLLQSCIKLGSLFGGKQVHS---------------- 103
+R ++ F+ EI + + +L++CI+LG L G+Q+HS
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 104 ------LLRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFKEMYGLGILPD 163
L L+ A + + +++ +W MI G TQ+ F+++A++ F++M GI D
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 164 EFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIK 223
E L + + CAGL++L GQ++HA GF +L ++L +Y + G + + +
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 224 SMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVISACSELATLAQ 283
+ +AWN L++G Q G +EE L + M G + TF S + A SE A + Q
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710
Query: 284 GQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVLWSAMIAAYGF 343
G+Q+HA + K G S V ++LISMY++ G + D+ K FL+ + V W+A+I AY
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 344 HGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVKKYKLKPRIE 403
HG G EA+ F M + N VT + +L ACSH GL +KG Y + M +Y L P+ E
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 404 HYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKL 463
HY CVVD+L RAG L A+ I+ MP+K D ++W+TLLSAC +HKN E+ + + +L+L
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLEL 890
Query: 464 DPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNVVHQFSMGDKS 523
+P D+A+YVLLSN++A +K W R+ M+++ V+KEPG SW E+KN +H F +GD++
Sbjct: 891 EPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQN 950
Query: 524 HPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKLAIAFALINTP 583
HP EI Y ++L GYV D S+L+++ +E+K+ + HSEKLAI+F L++ P
Sbjct: 951 HPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLP 1010
Query: 584 ESIPIRVMKNLRVCNDCHNAIKCISKIRNREII 591
++PI VMKNLRVCNDCH IK +SK+ NREII
Sbjct: 1011 ATVPINVMKNLRVCNDCHAWIKFVSKVSNREII 1043
BLAST of Lsi11G017140 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 424.5 bits (1090), Expect = 2.2e-117
Identity = 231/611 (37.81%), Postives = 356/611 (58.27%), Query Frame = 0
Query: 15 LHSFTVRLLSTKTPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDPSLFSHLLQSCIKLGS 74
+HSF V+L S S G A F + D S ++ ++ +++G
Sbjct: 168 VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQ 227
Query: 75 LFGGKQVHSLLRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFKEMYGLGI 134
+ DL AQ F++M+ER+I TWN+MI+G Q ++ +A+ +F +M +
Sbjct: 228 M-----------DLAMAQ--FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 287
Query: 135 L-PDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGE 194
L PD FTL SVL CA L L G+++H+ ++ GF+++ +V ++L MY + G +
Sbjct: 288 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 347
Query: 195 KLIK---------------------------------SMPIRNVVAWNTLIAGKAQHGCS 254
+LI+ S+ R+VVAW +I G QHG
Sbjct: 348 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 407
Query: 255 EEVLNQYNMMKIAGFRPDKITFVSVISACSELATLAQGQQIHAEVIKAGAGSVVAVVSSL 314
E +N + M G RP+ T +++S S LA+L+ G+QIH +K+G V+V ++L
Sbjct: 408 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 467
Query: 315 ISMYSRSGCLEDSVKAF-LDREDSDVVLWSAMIAAYGFHGRGEEAIKLFHLMEDLKMEAN 374
I+MY+++G + + +AF L R + D V W++MI A HG EEA++LF M + +
Sbjct: 468 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 527
Query: 375 EVTFLSLLYACSHCGLKEKGTEYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAECMI 434
+T++ + AC+H GL +G +Y D+M K+ P + HY C+VDL GRAG L+EA+ I
Sbjct: 528 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 587
Query: 435 RSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASAKNWP 494
MP++ D + W +LLSAC++HKN ++ K +E +L L+P ++ +Y L+N++++ W
Sbjct: 588 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 647
Query: 495 DVSEIRKAMRDRNVRKEPGISWFELKNVVHQFSMGDKSHPQYLEIDSYLKELMYELKLHG 554
+ ++IRK+M+D V+KE G SW E+K+ VH F + D +HP+ EI +K++ E+K G
Sbjct: 648 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 707
Query: 555 YVPDLGSVLHDMDNEEKEYNLAHHSEKLAIAFALINTPESIPIRVMKNLRVCNDCHNAIK 591
YVPD SVLHD++ E KE L HHSEKLAIAF LI+TP+ +R+MKNLRVCNDCH AIK
Sbjct: 708 YVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIK 765
BLAST of Lsi11G017140 vs. ExPASy Swiss-Prot
Match:
Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)
HSP 1 Score: 413.7 bits (1062), Expect = 3.8e-114
Identity = 203/503 (40.36%), Postives = 313/503 (62.23%), Query Frame = 0
Query: 88 LENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFKEMYGLGILPDEFTLGSVLRG 147
+++ +++F+ M +++ ++N +I G Q E A+ + +EM + PD FTL SVL
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 148 CAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVAW 207
+ ++ G+E+H +++ G + ++ +GSSL MY KS + D E++ + R+ ++W
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 208 NTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVISACSELATLAQGQQIHAEVIK 267
N+L+AG Q+G E L + M A +P + F SVI AC+ LATL G+Q+H V++
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 268 AGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVLWSAMIAAYGFHGRGEEAIKL 327
G GS + + S+L+ MYS+ G ++ + K F D V W+A+I + HG G EA+ L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 328 FHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVKKYKLKPRIEHYTCVVDLLG 387
F M+ ++ N+V F+++L ACSH GL ++ Y + M K Y L +EHY V DLLG
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 388 RAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASYVL 447
RAG+LEEA I M V+ G +W TLLS+C +HKN E+A++++E+I +D + +YVL
Sbjct: 492 RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVL 551
Query: 448 LSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNVVHQFSMGDKSHPQYLEIDSY 507
+ N++AS W +++++R MR + +RK+P SW E+KN H F GD+SHP +I+ +
Sbjct: 552 MCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEF 611
Query: 508 LKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKLAIAFALINTPESIPIRVMKN 567
LK +M +++ GYV D VLHD+D E K L HSE+LA+AF +INT IRV KN
Sbjct: 612 LKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKN 671
Query: 568 LRVCNDCHNAIKCISKIRNREII 591
+R+C DCH AIK ISKI REII
Sbjct: 672 IRICTDCHVAIKFISKITEREII 694
BLAST of Lsi11G017140 vs. ExPASy TrEMBL
Match:
A0A6J1HWJ8 (pentatricopeptide repeat-containing protein At2g41080 OS=Cucurbita maxima OX=3661 GN=LOC111468145 PE=3 SV=1)
HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 550/643 (85.54%), Postives = 572/643 (88.96%), Query Frame = 0
Query: 1 MGKPSRSFDAFFNPLHSFTVRLLSTKTPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDPS 60
MGKPSRSFDA FNPLH+ TVRLLSTKT SASLQEFTSLC+GGRI QAY+ FKSEIWSDPS
Sbjct: 1 MGKPSRSFDALFNPLHALTVRLLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHLLQSCIKLGSLFGGKQVHSL------------------------------------ 120
LFSHLLQSCIKLGSLFGG+QVHSL
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCAYDKFISNHLLNLYSKLGNLKSSLVLFSQM 120
Query: 121 -----------------LRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFK 180
L DLE+AQKLFDEMSERNIATWNAMITGLTQFE+NEQA+SLF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALSLFR 180
Query: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
EMYGLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 EMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVIS 300
SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ+GCSEEVLNQYNMMK+AGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
Query: 301 ACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVL 360
ACSELATL QGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVK FLDRED+DVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFLDREDADVVL 360
Query: 361 WSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
WSAMIAAYGFHGRGEEAI+LFH ME+LKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
Query: 421 KKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
++YKLKPRIEHYTCVVDLLGRAGRLEEAE MIRSMPVKADGIIWKTLLSACKLHK AEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKKAEMA 480
Query: 481 KRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNV 540
KRISEEILKLDPLDAASYVLLSNIHASA+NWPDVSEIRKAMRDRNV+KEPGISW ELKN+
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKL 591
VHQFSMGDKSHPQYLEIDSYLKELM E+KLHGYVPD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
BLAST of Lsi11G017140 vs. ExPASy TrEMBL
Match:
A0A6J1GM53 (pentatricopeptide repeat-containing protein At2g41080 OS=Cucurbita moschata OX=3662 GN=LOC111455573 PE=3 SV=1)
HSP 1 Score: 1081.6 bits (2796), Expect = 0.0e+00
Identity = 547/643 (85.07%), Postives = 571/643 (88.80%), Query Frame = 0
Query: 1 MGKPSRSFDAFFNPLHSFTVRLLSTKTPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDPS 60
MG+PSRSFDA FNPLH+ VR LSTKT SASLQEFTSLC+GGRI QAY+ FKSEIWSDPS
Sbjct: 1 MGQPSRSFDALFNPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHLLQSCIKLGSLFGGKQVHSL------------------------------------ 120
LFSHLLQSCIKLGSLFGG+QVHSL
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
Query: 121 -----------------LRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFK 180
L DLE+AQKLFDEMSERNIATWNAMITGLTQFE+NEQA+ LF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALGLFR 180
Query: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVIS 300
SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ+GCSEEVLNQYNMMK+AGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
Query: 301 ACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVL 360
ACSELATL QGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVK F+DRED+DVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
Query: 361 WSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
WSAMIAAYGFHGRGEEAI+LFH ME+LKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
Query: 421 KKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
++YKLKPRIEHYTCVVDLLGRAGRLEEAE MIRSMPVKADGIIWKTLLSACKLHKNAEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
Query: 481 KRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNV 540
KRISEEILKLDPLDAASYVLLSNIHASA+NWPDVSEIRKAMRDRNV+KEPGISW ELKN+
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKL 591
VHQFSMGDKSHPQYLEIDSYLKELM E+KLHGYVPD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
BLAST of Lsi11G017140 vs. ExPASy TrEMBL
Match:
A0A1S4E0C2 (pentatricopeptide repeat-containing protein At2g41080 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495490 PE=3 SV=1)
HSP 1 Score: 1060.8 bits (2742), Expect = 2.2e-306
Identity = 530/591 (89.68%), Postives = 557/591 (94.25%), Query Frame = 0
Query: 1 MGKPSRSFDAFFNPLHSFTVRLLSTK-TPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDP 60
MGKPS SF+AF NP +SFTVR LS K + SASLQEFTSLCN GRIRQAYDTFK EIWSDP
Sbjct: 1 MGKPSGSFNAFLNPFYSFTVRSLSMKISSSASLQEFTSLCNDGRIRQAYDTFKVEIWSDP 60
Query: 61 SLFSHLLQSCIKLGSLFGGKQVHSLLRDLENAQKLFDEMSERNIATWNAMITGLTQFEFN 120
SLFSHLLQSCIKLGSLFGGKQ L DLENAQKLFDEMSERNIATWNAMI GLTQFEFN
Sbjct: 61 SLFSHLLQSCIKLGSLFGGKQ----LGDLENAQKLFDEMSERNIATWNAMIAGLTQFEFN 120
Query: 121 EQAISLFKEMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSL 180
+QA+SLFKEMYGLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACL+KCGFEL+ VVGSSL
Sbjct: 121 KQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSL 180
Query: 181 AHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDK 240
AHMY+KSGSLSDGEKLIKSMPIR VVAWNTLIAGKAQ+GC EEVLNQYNMMK+AGFRPDK
Sbjct: 181 AHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDK 240
Query: 241 ITFVSVISACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLD 300
ITFVSV+SACSELATL QGQQIHAEVIKAGA SV+AV+SSLISMYSRSGCLEDS+KAF+D
Sbjct: 241 ITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSGCLEDSIKAFVD 300
Query: 301 REDSDVVLWSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKG 360
RED DVVLWS+MIAAYGFHGRGEEA++LFH MEDLKMEANEVTFLSLLYACSH GLKEKG
Sbjct: 301 REDFDVVLWSSMIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKG 360
Query: 361 TEYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACK 420
TEYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAE MIRSMPVK DGIIWKTLL+ACK
Sbjct: 361 TEYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDGIIWKTLLAACK 420
Query: 421 LHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGI 480
LHK AEMAKRISEEI+KLDPLDAASYVLLSNIHASA+NWP+VSEIRKAMRDRNVRKEPGI
Sbjct: 421 LHKEAEMAKRISEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAMRDRNVRKEPGI 480
Query: 481 SWFELKNVVHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYN 540
SW ELKN+VHQFSMGDKSHPQY EID YLKELM ELK HGYVPDLGSVLHDMDNEEKEYN
Sbjct: 481 SWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVLHDMDNEEKEYN 540
Query: 541 LAHHSEKLAIAFALINTPESIPIRVMKNLRVCNDCHNAIKCISKIRNREII 591
LAHHSEK AIAFAL+NT E++PIRVMKNLRVCNDCHNAIKCIS+IRNREII
Sbjct: 541 LAHHSEKFAIAFALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNREII 587
BLAST of Lsi11G017140 vs. ExPASy TrEMBL
Match:
A0A1S3C1T8 (pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495490 PE=3 SV=1)
HSP 1 Score: 1049.7 bits (2713), Expect = 5.1e-303
Identity = 534/644 (82.92%), Postives = 561/644 (87.11%), Query Frame = 0
Query: 1 MGKPSRSFDAFFNPLHSFTVRLLSTK-TPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDP 60
MGKPS SF+AF NP +SFTVR LS K + SASLQEFTSLCN GRIRQAYDTFK EIWSDP
Sbjct: 1 MGKPSGSFNAFLNPFYSFTVRSLSMKISSSASLQEFTSLCNDGRIRQAYDTFKVEIWSDP 60
Query: 61 SLFSHLLQSCIKLGSLFGGKQVHSL----------------------------------- 120
SLFSHLLQSCIKLGSLFGGKQVHSL
Sbjct: 61 SLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNLYSKLGQFKSSLVLFSN 120
Query: 121 ------------------LRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLF 180
L DLENAQKLFDEMSERNIATWNAMI GLTQFEFN+QA+SLF
Sbjct: 121 MPRRNLMSFNILINGYLQLGDLENAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLF 180
Query: 181 KEMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKS 240
KEMYGLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACL+KCGFEL+ VVGSSLAHMY+KS
Sbjct: 181 KEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKS 240
Query: 241 GSLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVI 300
GSLSDGEKLIKSMPIR VVAWNTLIAGKAQ+GC EEVLNQYNMMK+AGFRPDKITFVSV+
Sbjct: 241 GSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVL 300
Query: 301 SACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVV 360
SACSELATL QGQQIHAEVIKAGA SV+AV+SSLISMYSRSGCLEDS+KAF+DRED DVV
Sbjct: 301 SACSELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSGCLEDSIKAFVDREDFDVV 360
Query: 361 LWSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLM 420
LWS+MIAAYGFHGRGEEA++LFH MEDLKMEANEVTFLSLLYACSH GLKEKGTEYLDLM
Sbjct: 361 LWSSMIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYLDLM 420
Query: 421 VKKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEM 480
VKKYKLKPRIEHYTCVVDLLGRAGRLEEAE MIRSMPVK DGIIWKTLL+ACKLHK AEM
Sbjct: 421 VKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDGIIWKTLLAACKLHKEAEM 480
Query: 481 AKRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKN 540
AKRISEEI+KLDPLDAASYVLLSNIHASA+NWP+VSEIRKAMRDRNVRKEPGISW ELKN
Sbjct: 481 AKRISEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAMRDRNVRKEPGISWLELKN 540
Query: 541 VVHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEK 591
+VHQFSMGDKSHPQY EID YLKELM ELK HGYVPDLGSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 LVHQFSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVLHDMDNEEKEYNLAHHSEK 600
BLAST of Lsi11G017140 vs. ExPASy TrEMBL
Match:
A0A6J1D3P8 (pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016714 PE=3 SV=1)
HSP 1 Score: 1048.5 bits (2710), Expect = 1.1e-302
Identity = 528/643 (82.12%), Postives = 561/643 (87.25%), Query Frame = 0
Query: 1 MGKPSRSFDAFFNPLHSFTVRLLSTKTPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDPS 60
MGKP SF A FNPLH+ VR LSTKT S LQEFT+LCNGGRIRQAY++FKSEIWSDPS
Sbjct: 1 MGKPILSFHALFNPLHAPAVRFLSTKTSSVYLQEFTNLCNGGRIRQAYESFKSEIWSDPS 60
Query: 61 LFSHLLQSCIKLGSLFGGKQVHSL------------------------------------ 120
LFSHLLQSCI++GS+FGGKQ+HSL
Sbjct: 61 LFSHLLQSCIEIGSIFGGKQLHSLVITSGCSQDKFISNHLLNLYSKLGQFKTSLVLFSHM 120
Query: 121 -----------------LRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFK 180
L DLE+AQKLFDEMSERNIATWNAMITGLTQFEFNEQA+SLF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFR 180
Query: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
EMYGLG LPDEFTLGSVLRGCAGLRS+ AGQEVHACLMKCGFELNLVVGSS+AHMYMKSG
Sbjct: 181 EMYGLGFLPDEFTLGSVLRGCAGLRSIRAGQEVHACLMKCGFELNLVVGSSVAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVIS 300
SLSDGEK+IKSMP RNVVAWNTLIAGKAQ+GCSEEVLNQYNMMK+AGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKVIKSMPTRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
Query: 301 ACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVL 360
ACSELATL QGQQIHAE IKAGAGSVVAV+SSLISMYSRSGCL+DSVKAFLDRED+DVVL
Sbjct: 301 ACSELATLGQGQQIHAEAIKAGAGSVVAVISSLISMYSRSGCLDDSVKAFLDREDADVVL 360
Query: 361 WSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
WSAMIAAYGFHGRGEE I+LFH ME+LKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEVIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
Query: 421 KKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
KKYKLKPRIEHYTCVVDLLGRAGRLEEAE IRSMPVKADGIIWKTLLSACK+HK AEMA
Sbjct: 421 KKYKLKPRIEHYTCVVDLLGRAGRLEEAEATIRSMPVKADGIIWKTLLSACKIHKKAEMA 480
Query: 481 KRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNV 540
KRISE+ILKLDPLDAASYVLLSNIHASA+NWPDVSEIRKAMRDR VRKEPGISW ELK+
Sbjct: 481 KRISEDILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRQVRKEPGISWLELKST 540
Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKL 591
VHQF+M DKSHP+YLEI+ YLKELM E+KL GYVPD+GSVLHDMDNEEKEYNLAHHSEKL
Sbjct: 541 VHQFNMSDKSHPKYLEIELYLKELMAEMKLQGYVPDIGSVLHDMDNEEKEYNLAHHSEKL 600
BLAST of Lsi11G017140 vs. NCBI nr
Match:
XP_022969026.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita maxima])
HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 550/643 (85.54%), Postives = 572/643 (88.96%), Query Frame = 0
Query: 1 MGKPSRSFDAFFNPLHSFTVRLLSTKTPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDPS 60
MGKPSRSFDA FNPLH+ TVRLLSTKT SASLQEFTSLC+GGRI QAY+ FKSEIWSDPS
Sbjct: 1 MGKPSRSFDALFNPLHALTVRLLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHLLQSCIKLGSLFGGKQVHSL------------------------------------ 120
LFSHLLQSCIKLGSLFGG+QVHSL
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCAYDKFISNHLLNLYSKLGNLKSSLVLFSQM 120
Query: 121 -----------------LRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFK 180
L DLE+AQKLFDEMSERNIATWNAMITGLTQFE+NEQA+SLF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALSLFR 180
Query: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
EMYGLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 EMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVIS 300
SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ+GCSEEVLNQYNMMK+AGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
Query: 301 ACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVL 360
ACSELATL QGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVK FLDRED+DVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFLDREDADVVL 360
Query: 361 WSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
WSAMIAAYGFHGRGEEAI+LFH ME+LKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
Query: 421 KKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
++YKLKPRIEHYTCVVDLLGRAGRLEEAE MIRSMPVKADGIIWKTLLSACKLHK AEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKKAEMA 480
Query: 481 KRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNV 540
KRISEEILKLDPLDAASYVLLSNIHASA+NWPDVSEIRKAMRDRNV+KEPGISW ELKN+
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKL 591
VHQFSMGDKSHPQYLEIDSYLKELM E+KLHGYVPD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
BLAST of Lsi11G017140 vs. NCBI nr
Match:
KAG7011986.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 548/643 (85.23%), Postives = 572/643 (88.96%), Query Frame = 0
Query: 1 MGKPSRSFDAFFNPLHSFTVRLLSTKTPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDPS 60
MGKPSRSFDAFF+PLH+ VR LSTKT SASLQEFTSLC+GGRI QAY+ FKSEIWSDPS
Sbjct: 1 MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHLLQSCIKLGSLFGGKQVHSL------------------------------------ 120
LFSHLLQSCIKLGSLFGG+QVHSL
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
Query: 121 -----------------LRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFK 180
L DLE+AQKLFDEMSERNIATWNAMITGLTQFE+NEQA+ LF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALGLFR 180
Query: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVIS 300
SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ+GCSEEVLNQYNMMK+AGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
Query: 301 ACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVL 360
ACSELATL QGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVK F+DRED+DVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
Query: 361 WSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
WSAMIAAYGFHGRGEEAI+LFH ME+LKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
Query: 421 KKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
++YKLKPRIEHYTCVVDLLGRAGRLEEAE MIRSMPVKADGIIWKTLLSACKLHKNAEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
Query: 481 KRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNV 540
KRISEEILKLDPLDAASYVLLSNIHASA+NWPDVSEIRKAMRDRNV+KEPGISW ELKN+
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKL 591
VHQFSMGDKSHPQYLEIDSYLKELM E+KLHGYVPD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
BLAST of Lsi11G017140 vs. NCBI nr
Match:
XP_022953052.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita moschata] >KAG6572381.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1081.6 bits (2796), Expect = 0.0e+00
Identity = 547/643 (85.07%), Postives = 571/643 (88.80%), Query Frame = 0
Query: 1 MGKPSRSFDAFFNPLHSFTVRLLSTKTPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDPS 60
MG+PSRSFDA FNPLH+ VR LSTKT SASLQEFTSLC+GGRI QAY+ FKSEIWSDPS
Sbjct: 1 MGQPSRSFDALFNPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHLLQSCIKLGSLFGGKQVHSL------------------------------------ 120
LFSHLLQSCIKLGSLFGG+QVHSL
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
Query: 121 -----------------LRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFK 180
L DLE+AQKLFDEMSERNIATWNAMITGLTQFE+NEQA+ LF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALGLFR 180
Query: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVIS 300
SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ+GCSEEVLNQYNMMK+AGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
Query: 301 ACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVL 360
ACSELATL QGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVK F+DRED+DVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
Query: 361 WSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
WSAMIAAYGFHGRGEEAI+LFH ME+LKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
Query: 421 KKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
++YKLKPRIEHYTCVVDLLGRAGRLEEAE MIRSMPVKADGIIWKTLLSACKLHKNAEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
Query: 481 KRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNV 540
KRISEEILKLDPLDAASYVLLSNIHASA+NWPDVSEIRKAMRDRNV+KEPGISW ELKN+
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKL 591
VHQFSMGDKSHPQYLEIDSYLKELM E+KLHGYVPD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
BLAST of Lsi11G017140 vs. NCBI nr
Match:
XP_023553764.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1081.2 bits (2795), Expect = 0.0e+00
Identity = 547/643 (85.07%), Postives = 571/643 (88.80%), Query Frame = 0
Query: 1 MGKPSRSFDAFFNPLHSFTVRLLSTKTPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDPS 60
MGKPSRSFDAFF+PLH+ VR LSTKT SASLQEFTSLC+GGRI QAY+ FKSEIWSDPS
Sbjct: 1 MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHLLQSCIKLGSLFGGKQVHSL------------------------------------ 120
LFSHLLQSCIKLGSLFGG+QVHSL
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
Query: 121 -----------------LRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFK 180
L DLE+AQKLFDEMSERNIATWNAMITGLTQFE+NEQA+ LF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALGLFR 180
Query: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVIS 300
SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ+GCSEEVLNQYNMMK+AGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
Query: 301 ACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVL 360
ACSELATL QGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVK F+DRED+DVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
Query: 361 WSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
WSAMIAAYGFHGRGEEAI+LFH ME+LKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
Query: 421 KKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
++YKLKPRIEHYTCVVDLLGRAGRLEEAE MIRSMPVKADGIIWKTLLSACKLHKNAEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
Query: 481 KRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNV 540
KRISEEILKLDPLDAASYVLLSNIHASA+NWPDVSEIRKAMRDRNV+KEPGISW ELKN
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNS 540
Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKL 591
VHQFSMGDKSHPQYLEIDSYLKELM E+KLHGY+PD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYMPDIGSVLHDMDNEEKEYNLAHHSEKF 600
BLAST of Lsi11G017140 vs. NCBI nr
Match:
XP_016901687.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g41080 isoform X2 [Cucumis melo])
HSP 1 Score: 1060.8 bits (2742), Expect = 4.6e-306
Identity = 530/591 (89.68%), Postives = 557/591 (94.25%), Query Frame = 0
Query: 1 MGKPSRSFDAFFNPLHSFTVRLLSTK-TPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDP 60
MGKPS SF+AF NP +SFTVR LS K + SASLQEFTSLCN GRIRQAYDTFK EIWSDP
Sbjct: 1 MGKPSGSFNAFLNPFYSFTVRSLSMKISSSASLQEFTSLCNDGRIRQAYDTFKVEIWSDP 60
Query: 61 SLFSHLLQSCIKLGSLFGGKQVHSLLRDLENAQKLFDEMSERNIATWNAMITGLTQFEFN 120
SLFSHLLQSCIKLGSLFGGKQ L DLENAQKLFDEMSERNIATWNAMI GLTQFEFN
Sbjct: 61 SLFSHLLQSCIKLGSLFGGKQ----LGDLENAQKLFDEMSERNIATWNAMIAGLTQFEFN 120
Query: 121 EQAISLFKEMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSL 180
+QA+SLFKEMYGLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACL+KCGFEL+ VVGSSL
Sbjct: 121 KQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSL 180
Query: 181 AHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDK 240
AHMY+KSGSLSDGEKLIKSMPIR VVAWNTLIAGKAQ+GC EEVLNQYNMMK+AGFRPDK
Sbjct: 181 AHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDK 240
Query: 241 ITFVSVISACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLD 300
ITFVSV+SACSELATL QGQQIHAEVIKAGA SV+AV+SSLISMYSRSGCLEDS+KAF+D
Sbjct: 241 ITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSGCLEDSIKAFVD 300
Query: 301 REDSDVVLWSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKG 360
RED DVVLWS+MIAAYGFHGRGEEA++LFH MEDLKMEANEVTFLSLLYACSH GLKEKG
Sbjct: 301 REDFDVVLWSSMIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKG 360
Query: 361 TEYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACK 420
TEYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAE MIRSMPVK DGIIWKTLL+ACK
Sbjct: 361 TEYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDGIIWKTLLAACK 420
Query: 421 LHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGI 480
LHK AEMAKRISEEI+KLDPLDAASYVLLSNIHASA+NWP+VSEIRKAMRDRNVRKEPGI
Sbjct: 421 LHKEAEMAKRISEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAMRDRNVRKEPGI 480
Query: 481 SWFELKNVVHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYN 540
SW ELKN+VHQFSMGDKSHPQY EID YLKELM ELK HGYVPDLGSVLHDMDNEEKEYN
Sbjct: 481 SWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVLHDMDNEEKEYN 540
Query: 541 LAHHSEKLAIAFALINTPESIPIRVMKNLRVCNDCHNAIKCISKIRNREII 591
LAHHSEK AIAFAL+NT E++PIRVMKNLRVCNDCHNAIKCIS+IRNREII
Sbjct: 541 LAHHSEKFAIAFALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNREII 587
BLAST of Lsi11G017140 vs. TAIR 10
Match:
AT2G41080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 692.6 bits (1786), Expect = 3.0e-199
Identity = 339/511 (66.34%), Postives = 412/511 (80.63%), Query Frame = 0
Query: 87 DLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFKEMYGLGILPDEFTLGSVLR 146
DL NA+K+FDEM +R + TWNAMI GL QFEFNE+ +SLF+EM+GLG PDE+TLGSV
Sbjct: 40 DLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFS 99
Query: 147 GCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVA 206
G AGLRS+ GQ++H +K G EL+LVV SSLAHMYM++G L DGE +I+SMP+RN+VA
Sbjct: 100 GSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVA 159
Query: 207 WNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVISACSELATLAQGQQIHAEVI 266
WNTLI G AQ+GC E VL Y MMKI+G RP+KITFV+V+S+CS+LA QGQQIHAE I
Sbjct: 160 WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI 219
Query: 267 KAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVLWSAMIAAYGFHGRGEEAIK 326
K GA SVVAVVSSLISMYS+ GCL D+ KAF +RED D V+WS+MI+AYGFHG+G+EAI+
Sbjct: 220 KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIE 279
Query: 327 LFHLM-EDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVKKYKLKPRIEHYTCVVDL 386
LF+ M E ME NEV FL+LLYACSH GLK+KG E D+MV+KY KP ++HYTCVVDL
Sbjct: 280 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDL 339
Query: 387 LGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASY 446
LGRAG L++AE +IRSMP+K D +IWKTLLSAC +HKNAEMA+R+ +EIL++DP D+A Y
Sbjct: 340 LGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACY 399
Query: 447 VLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNVVHQFSMGDKSHPQYLEID 506
VLL+N+HASAK W DVSE+RK+MRD+NV+KE GISWFE K VHQF MGD+S + EI
Sbjct: 400 VLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIY 459
Query: 507 SYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKLAIAFALINTPESIPIRVM 566
SYLKEL E+KL GY PD SVLHDMD EEKE +L HSEKLA+AFAL+ PE PIR++
Sbjct: 460 SYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRII 519
Query: 567 KNLRVCNDCHNAIKCISKIRNREIIKTKGNQ 597
KNLRVC+DCH A K IS I+NREI G++
Sbjct: 520 KNLRVCSDCHVAFKYISVIKNREITLRDGSR 550
BLAST of Lsi11G017140 vs. TAIR 10
Match:
AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 428.7 bits (1101), Expect = 8.2e-120
Identity = 217/536 (40.49%), Postives = 324/536 (60.45%), Query Frame = 0
Query: 63 SHLLQSCIKLGSLFGGK--QVHSLLRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNE 122
+H+LQS + + G +++ LE A+K+F++M +R+ TW +I+G +Q +
Sbjct: 84 AHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPC 143
Query: 123 QAISLFKEMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLA 182
A+ F +M G P+EFTL SV++ A R G ++H +KCGF+ N+ VGS+L
Sbjct: 144 DALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALL 203
Query: 183 HMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKI 242
+Y + G + D + + ++ RN V+WN LIAG A+ +E+ L + M GFRP
Sbjct: 204 DLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHF 263
Query: 243 TFVSVISACSELATLAQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDR 302
++ S+ ACS L QG+ +HA +IK+G V ++L+ MY++SG + D+ K F
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 303 EDSDVVLWSAMIAAYGFHGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGT 362
DVV W++++ AY HG G+EA+ F M + + NE++FLS+L ACSH GL ++G
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 363 EYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKL 422
Y +LM KK + P HY VVDLLGRAG L A I MP++ IWK LL+AC++
Sbjct: 384 HYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 443
Query: 423 HKNAEMAKRISEEILKLDPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGIS 482
HKN E+ +E + +LDP D +V+L NI+AS W D + +RK M++ V+KEP S
Sbjct: 444 HKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 503
Query: 483 WFELKNVVHQFSMGDKSHPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNL 542
W E++N +H F D+ HPQ EI +E++ ++K GYVPD V+ +D +E+E NL
Sbjct: 504 WVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNL 563
Query: 543 AHHSEKLAIAFALINTPESIPIRVMKNLRVCNDCHNAIKCISKIRNREIIKTKGNQ 597
+HSEK+A+AFAL+NTP I + KN+RVC DCH AIK SK+ REII N+
Sbjct: 564 QYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNR 618
BLAST of Lsi11G017140 vs. TAIR 10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 426.4 bits (1095), Expect = 4.1e-119
Identity = 221/573 (38.57%), Postives = 338/573 (58.99%), Query Frame = 0
Query: 44 IRQAYDTFK----SEIWSDPSLFSHLLQSCIKLGSLFGGKQVHS---------------- 103
+R ++ F+ EI + + +L++CI+LG L G+Q+HS
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 104 ------LLRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFKEMYGLGILPD 163
L L+ A + + +++ +W MI G TQ+ F+++A++ F++M GI D
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 164 EFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIK 223
E L + + CAGL++L GQ++HA GF +L ++L +Y + G + + +
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 224 SMPIRNVVAWNTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVISACSELATLAQ 283
+ +AWN L++G Q G +EE L + M G + TF S + A SE A + Q
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710
Query: 284 GQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVLWSAMIAAYGF 343
G+Q+HA + K G S V ++LISMY++ G + D+ K FL+ + V W+A+I AY
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 344 HGRGEEAIKLFHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVKKYKLKPRIE 403
HG G EA+ F M + N VT + +L ACSH GL +KG Y + M +Y L P+ E
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 404 HYTCVVDLLGRAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKL 463
HY CVVD+L RAG L A+ I+ MP+K D ++W+TLLSAC +HKN E+ + + +L+L
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLEL 890
Query: 464 DPLDAASYVLLSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNVVHQFSMGDKS 523
+P D+A+YVLLSN++A +K W R+ M+++ V+KEPG SW E+KN +H F +GD++
Sbjct: 891 EPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQN 950
Query: 524 HPQYLEIDSYLKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKLAIAFALINTP 583
HP EI Y ++L GYV D S+L+++ +E+K+ + HSEKLAI+F L++ P
Sbjct: 951 HPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLP 1010
Query: 584 ESIPIRVMKNLRVCNDCHNAIKCISKIRNREII 591
++PI VMKNLRVCNDCH IK +SK+ NREII
Sbjct: 1011 ATVPINVMKNLRVCNDCHAWIKFVSKVSNREII 1043
BLAST of Lsi11G017140 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 424.5 bits (1090), Expect = 1.5e-118
Identity = 231/611 (37.81%), Postives = 356/611 (58.27%), Query Frame = 0
Query: 15 LHSFTVRLLSTKTPSASLQEFTSLCNGGRIRQAYDTFKSEIWSDPSLFSHLLQSCIKLGS 74
+HSF V+L S S G A F + D S ++ ++ +++G
Sbjct: 168 VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQ 227
Query: 75 LFGGKQVHSLLRDLENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFKEMYGLGI 134
+ DL AQ F++M+ER+I TWN+MI+G Q ++ +A+ +F +M +
Sbjct: 228 M-----------DLAMAQ--FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 287
Query: 135 L-PDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGE 194
L PD FTL SVL CA L L G+++H+ ++ GF+++ +V ++L MY + G +
Sbjct: 288 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 347
Query: 195 KLIK---------------------------------SMPIRNVVAWNTLIAGKAQHGCS 254
+LI+ S+ R+VVAW +I G QHG
Sbjct: 348 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 407
Query: 255 EEVLNQYNMMKIAGFRPDKITFVSVISACSELATLAQGQQIHAEVIKAGAGSVVAVVSSL 314
E +N + M G RP+ T +++S S LA+L+ G+QIH +K+G V+V ++L
Sbjct: 408 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 467
Query: 315 ISMYSRSGCLEDSVKAF-LDREDSDVVLWSAMIAAYGFHGRGEEAIKLFHLMEDLKMEAN 374
I+MY+++G + + +AF L R + D V W++MI A HG EEA++LF M + +
Sbjct: 468 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 527
Query: 375 EVTFLSLLYACSHCGLKEKGTEYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAECMI 434
+T++ + AC+H GL +G +Y D+M K+ P + HY C+VDL GRAG L+EA+ I
Sbjct: 528 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 587
Query: 435 RSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASAKNWP 494
MP++ D + W +LLSAC++HKN ++ K +E +L L+P ++ +Y L+N++++ W
Sbjct: 588 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 647
Query: 495 DVSEIRKAMRDRNVRKEPGISWFELKNVVHQFSMGDKSHPQYLEIDSYLKELMYELKLHG 554
+ ++IRK+M+D V+KE G SW E+K+ VH F + D +HP+ EI +K++ E+K G
Sbjct: 648 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 707
Query: 555 YVPDLGSVLHDMDNEEKEYNLAHHSEKLAIAFALINTPESIPIRVMKNLRVCNDCHNAIK 591
YVPD SVLHD++ E KE L HHSEKLAIAF LI+TP+ +R+MKNLRVCNDCH AIK
Sbjct: 708 YVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIK 765
BLAST of Lsi11G017140 vs. TAIR 10
Match:
AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 413.7 bits (1062), Expect = 2.7e-115
Identity = 203/503 (40.36%), Postives = 313/503 (62.23%), Query Frame = 0
Query: 88 LENAQKLFDEMSERNIATWNAMITGLTQFEFNEQAISLFKEMYGLGILPDEFTLGSVLRG 147
+++ +++F+ M +++ ++N +I G Q E A+ + +EM + PD FTL SVL
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 148 CAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVAW 207
+ ++ G+E+H +++ G + ++ +GSSL MY KS + D E++ + R+ ++W
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 208 NTLIAGKAQHGCSEEVLNQYNMMKIAGFRPDKITFVSVISACSELATLAQGQQIHAEVIK 267
N+L+AG Q+G E L + M A +P + F SVI AC+ LATL G+Q+H V++
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 268 AGAGSVVAVVSSLISMYSRSGCLEDSVKAFLDREDSDVVLWSAMIAAYGFHGRGEEAIKL 327
G GS + + S+L+ MYS+ G ++ + K F D V W+A+I + HG G EA+ L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 328 FHLMEDLKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVKKYKLKPRIEHYTCVVDLLG 387
F M+ ++ N+V F+++L ACSH GL ++ Y + M K Y L +EHY V DLLG
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 388 RAGRLEEAECMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASYVL 447
RAG+LEEA I M V+ G +W TLLS+C +HKN E+A++++E+I +D + +YVL
Sbjct: 492 RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVL 551
Query: 448 LSNIHASAKNWPDVSEIRKAMRDRNVRKEPGISWFELKNVVHQFSMGDKSHPQYLEIDSY 507
+ N++AS W +++++R MR + +RK+P SW E+KN H F GD+SHP +I+ +
Sbjct: 552 MCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEF 611
Query: 508 LKELMYELKLHGYVPDLGSVLHDMDNEEKEYNLAHHSEKLAIAFALINTPESIPIRVMKN 567
LK +M +++ GYV D VLHD+D E K L HSE+LA+AF +INT IRV KN
Sbjct: 612 LKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKN 671
Query: 568 LRVCNDCHNAIKCISKIRNREII 591
+R+C DCH AIK ISKI REII
Sbjct: 672 IRICTDCHVAIKFISKITEREII 694
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q8S9M4 | 8.9e-204 | 57.73 | Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana OX... | [more] |
| Q9LIQ7 | 1.2e-118 | 40.49 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
| Q9SVP7 | 5.7e-118 | 38.57 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... | [more] |
| Q9SHZ8 | 2.2e-117 | 37.81 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
| Q9LW63 | 3.8e-114 | 40.36 | Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1HWJ8 | 0.0e+00 | 85.54 | pentatricopeptide repeat-containing protein At2g41080 OS=Cucurbita maxima OX=366... | [more] |
| A0A6J1GM53 | 0.0e+00 | 85.07 | pentatricopeptide repeat-containing protein At2g41080 OS=Cucurbita moschata OX=3... | [more] |
| A0A1S4E0C2 | 2.2e-306 | 89.68 | pentatricopeptide repeat-containing protein At2g41080 isoform X2 OS=Cucumis melo... | [more] |
| A0A1S3C1T8 | 5.1e-303 | 82.92 | pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Cucumis melo... | [more] |
| A0A6J1D3P8 | 1.1e-302 | 82.12 | pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Momordica ch... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022969026.1 | 0.0e+00 | 85.54 | pentatricopeptide repeat-containing protein At2g41080 [Cucurbita maxima] | [more] |
| KAG7011986.1 | 0.0e+00 | 85.23 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| XP_022953052.1 | 0.0e+00 | 85.07 | pentatricopeptide repeat-containing protein At2g41080 [Cucurbita moschata] >KAG6... | [more] |
| XP_023553764.1 | 0.0e+00 | 85.07 | pentatricopeptide repeat-containing protein At2g41080 [Cucurbita pepo subsp. pep... | [more] |
| XP_016901687.1 | 4.6e-306 | 89.68 | PREDICTED: pentatricopeptide repeat-containing protein At2g41080 isoform X2 [Cuc... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G41080.1 | 3.0e-199 | 66.34 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G24000.1 | 8.2e-120 | 40.49 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G13650.1 | 4.1e-119 | 38.57 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT2G22070.1 | 1.5e-118 | 37.81 | pentatricopeptide (PPR) repeat-containing protein | [more] |
| AT3G23330.1 | 2.7e-115 | 40.36 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
