
Lsi11G016690 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATATAACCAACTTGCTTGGTCCACCCATTCCCTCTTTTTCTTTCAACTGTCGAAATAGTTTTCGAATAAAGTTAAGAGAAAAGTTTTCATCGGAATCGGAATCGGAATCGGAACCGGAACATTCCACCACCGCCGCCTGAATATCTCCTCCAATCCCGATCTTCATTTTTCCACTTCACTTCTTCCTTCTCAATTCCCTCTTCTTCTTCTTTTACTCCGTCATGACAATCGACCACCACTCCCAACACTCCGATCAAACGACCGATGATGATTCCGACCATCTCCATCCTACTCTCCCCACGCCAGTTGTCGCCAATGGCGCCGACTGCGAGAATGCCGGAGATGACTTCTTCGTTCCTCCCCTGAACTTCGCCGTCGTTGATAATGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTCTTTTTTGCAGACATTAGGCCTTCGTTCGATTATGTAAGACTTTTCCTACTGATTCGTTGTTTATTTGCTTTCGTTGTTCTGTTCGTCTGTTCTTGATTTTGTTCGCTTCGTTTTGTTTTGTGTTTTGAGTGATAATCCATGATTGAGTATGAACTGATTGTTTTTTGACGGATATTGTAGATGTCTTTGTCCCGAGCCATATCCTGAGGCCAACATGGATTTTCTCAAGTCCAATGGGATCCGATTGTTTCAATTTGGGATTGAAGGTTCTAAGGTTTGTTCTTACTTGATCGAAATATCATTATTGAGAGTTCTAGTTTATGTGAATTTTCAATGATTTTGATATGTTAATGAGGGCTAATGCTAACGTGTAAAAGTAAATTTCTGTCCTCTCCACGGATTTTCTGTTCGAATTTGTTGTTTTCTGATCCTTCAGTGAATTTGATTTTTGACCTTTTATGTCAAATGTCAATTCCCAAATTATCAGGGGAAGCTTCTTTTAAAGTGATTTTTGTGATAATGCGTTTGTATGCATATGAACTTAACTAGAGAGATTAGAACTACTGTTGGCTTGAAGTTGTTTCTAATAATAACATATGGGTTTGGTTTTGGTAAATTTGTTATGTAAGGAAAACAATTAAGATACAAGTATTTGATGGTGAGCCAATCCAAAGGACTTTAAAGAGAGTAATTTTAACACCTTAGTTTAATTGACTGCTTTTGACTGTTTCTATGCGTTTATGAAAACTGTTTTTGGGGATTTAGCTAACAAAATTTAGCTTGTGTAAATTGTCTAGGCTGGTTCAGACAAGGTTGATGCGTATGTAAACTTGATTCTCGAGTGTATGAGGAATTTGGATGTGAGCGCTGATCAAATGTACTATTTGGTATGATGAAATTTGATCTGACTAATGTTATCTCAGTTATTTCGTCTGAAATGCATCAACGTATTTAATTCAATTTTTCAATAATTAAATTTACACTTTTGACAACTTTCTTCTGGTCTTGTTTTAACTCAATTAAGCAATGATTTGATCAATTCGTATAAACACACACATATGCACGAGGAGAAAATAAAAACAGAGAAAGAGAGGAGCGAGAGTAGGCTGGCTGTATGGTTATCATCATTTACATTGCCTTGGGCTACTATATATATTAGTCTTGTGGTGATTACAAGTACATATTTTTATGGGGGTTGTGTGAGGGGAAGGGGCGTTTAGACTTCCTTTTGAACTGTTTCATTGGTTATAAAGCTTCCATGTTCCTTTTGATTGAGAAGTAGGATGAAATTGCTTTGTTTTCCTGACATATGCCGATTGTCAACTGAATGCTAATTGTTGACAAAAAACCAATATAAAACTTAACATTTTGGAGAACTTGAGAGGTTAAGAGGTTGCATCATCCTTTCCTTGCTTTATTTTGTTTTAGTGTCATGCCATTGGTAACTTTTAATATTTGGAACTTGGAAGTTGTCATCTTTCACCAAAGTTTGAATGTTTTACCTAAGAATCAACTGCCTTGTTGGCGATTATAGCAGGGTTCCATTAATGATATATAGTAGTCTAAAAGAACGCTGATCTCTTTGGTTTTGTTGAAATTAAATGCAGGAGCCTTTTGTGAACATTCCAGACTATACGATTCGTGAAGTACTTAAAGTTATTCTTGGTACCTACCACTACCAATACTTCACATTTTAAATCTTCAATGAGGCTAAATCAATAGATCTTATGTTCTATTGTTTGGATTTGTGTTAACTCGGGCCTTTTTTTTCACCATGCAGATGTGAGGAATCGCCCAGTTTTAATCCATTGCAAGCGAGGGAAGGTATGTATTGTTATAAATATCAATAAACAAAATATAGAAGTAAATTTACCGTAACCCATCAGTTTATGCTTTTAAATTGAGTAGTGATTTAACATGGTATCACAATAGAAAGTTTTGTGTTTGAACTATTGTAATGTATTTTAGTATTAACCATCAGCTTGAGCTTTTAGATTAATTAAGTAGTGATTTTGAAAGTAGGTAGTAGAGGTTTGTACTATTAAAATGTATTTAGTATTATCCATCCTTTTGTGCTTTTGGGTTAAATGGTAATTTTAAAAGTAGCTAGGTAGTAGCTTCTACCATGGCTACTGCTTTTATGGCGTTTCTAAATAGTTAACTTGTTTCTCACTCTTCAGCACCGAACTGGTTGTGTTGTGGGATGCTTTAGAAAGTTGCAGAAATGGTGCCTATCGTCAGTGTTTGATGAGTACCAGCGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGGTTCATTGAACTATTCGACATTTCTGGCTTGAAGCATTTGCCATCATCATTTCCATGTTCCGAAAGGTAATTGTCCTGTATGGCTGTTTTGAGGATGTTCATTTTAGTAGAAGAAGATGCCCAATAAATTTGAATAGACGAACCATTCTGAAGTTGTTTTTCACTTTTCAGTGGTCTAGTTACTTGTCATTCTTTAAGCCTCACATTTCGTTCAAGTGATTAA ATATAACCAACTTGCTTGGTCCACCCATTCCCTCTTTTTCTTTCAACTGTCGAAATAGTTTTCGAATAAAGTTAAGAGAAAAGTTTTCATCGGAATCGGAATCGGAATCGGAACCGGAACATTCCACCACCGCCGCCTGAATATCTCCTCCAATCCCGATCTTCATTTTTCCACTTCACTTCTTCCTTCTCAATTCCCTCTTCTTCTTCTTTTACTCCGTCATGACAATCGACCACCACTCCCAACACTCCGATCAAACGACCGATGATGATTCCGACCATCTCCATCCTACTCTCCCCACGCCAGTTGTCGCCAATGGCGCCGACTGCGAGAATGCCGGAGATGACTTCTTCGTTCCTCCCCTGAACTTCGCCGTCGTTGATAATGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTCTTTTTTGCAGACATTAGGCCTTCGTTCGATTATATGTCTTTGTCCCGAGCCATATCCTGAGGCCAACATGGATTTTCTCAAGTCCAATGGGATCCGATTGTTTCAATTTGGGATTGAAGGTTCTAAGGCTGGTTCAGACAAGGTTGATGCGTATGTAAACTTGATTCTCGAGTGTATGAGGAATTTGGATGTGAGCGCTGATCAAATGTACTATTTGGAGCCTTTTGTGAACATTCCAGACTATACGATTCGTGAACACCGAACTGGTTGTGTTGTGGGATGCTTTAGAAAGTTGCAGAAATGGTGCCTATCGTCAGTGTTTGATGAGTACCAGCGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGGTTCATTGAACTATTCGACATTTCTGGCTTGAAGCATTTGCCATCATCATTTCCATGTTCCGAAAGTGGTCTAGTTACTTGTCATTCTTTAAGCCTCACATTTCGTTCAAGTGATTAA ATGACAATCGACCACCACTCCCAACACTCCGATCAAACGACCGATGATGATTCCGACCATCTCCATCCTACTCTCCCCACGCCAGTTGTCGCCAATGGCGCCGACTGCGAGAATGCCGGAGATGACTTCTTCGTTCCTCCCCTGAACTTCGCCGTCGTTGATAATGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTCTTTTTTGCAGACATTAGGCCTTCGTTCGATTATATGTCTTTGTCCCGAGCCATATCCTGAGGCCAACATGGATTTTCTCAAGTCCAATGGGATCCGATTGTTTCAATTTGGGATTGAAGGTTCTAAGGCTGGTTCAGACAAGGTTGATGCGTATGTAAACTTGATTCTCGAGTGTATGAGGAATTTGGATGTGAGCGCTGATCAAATGTACTATTTGGAGCCTTTTGTGAACATTCCAGACTATACGATTCGTGAACACCGAACTGGTTGTGTTGTGGGATGCTTTAGAAAGTTGCAGAAATGGTGCCTATCGTCAGTGTTTGATGAGTACCAGCGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGGTTCATTGAACTATTCGACATTTCTGGCTTGAAGCATTTGCCATCATCATTTCCATGTTCCGAAAGTGGTCTAGTTACTTGTCATTCTTTAAGCCTCACATTTCGTTCAAGTGATTAA MTIDHHSQHSDQTTDDDSDHLHPTLPTPVVANGADCENAGDDFFVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGSDKVDAYVNLILECMRNLDVSADQMYYLEPFVNIPDYTIREHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPSSFPCSESGLVTCHSLSLTFRSSD Homology
BLAST of Lsi11G016690 vs. ExPASy Swiss-Prot
Match: Q9ZVN4 (Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana OX=3702 GN=DSP1 PE=1 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 9.7e-60 Identity = 114/190 (60.00%), Postives = 130/190 (68.42%), Query Frame = 0
BLAST of Lsi11G016690 vs. ExPASy Swiss-Prot
Match: Q84MD6 (Tyrosine-protein phosphatase DSP2 OS=Arabidopsis thaliana OX=3702 GN=DSP2 PE=1 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.1e-58 Identity = 121/214 (56.54%), Postives = 141/214 (65.89%), Query Frame = 0
BLAST of Lsi11G016690 vs. ExPASy Swiss-Prot
Match: Q940L5 (Probable tyrosine-protein phosphatase DSP4 OS=Arabidopsis thaliana OX=3702 GN=DSP4 PE=2 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.1e-55 Identity = 111/199 (55.78%), Postives = 127/199 (63.82%), Query Frame = 0
BLAST of Lsi11G016690 vs. ExPASy Swiss-Prot
Match: Q0DX67 (Probable tyrosine-protein phosphatase DSP2 OS=Oryza sativa subsp. japonica OX=39947 GN=DSP2 PE=2 SV=2) HSP 1 Score: 186.8 bits (473), Expect = 2.7e-46 Identity = 97/170 (57.06%), Postives = 118/170 (69.41%), Query Frame = 0
BLAST of Lsi11G016690 vs. ExPASy Swiss-Prot
Match: Q681Z2 (Tyrosine-protein phosphatase DSP3 OS=Arabidopsis thaliana OX=3702 GN=DSP3 PE=1 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 8.0e-38 Identity = 83/176 (47.16%), Postives = 111/176 (63.07%), Query Frame = 0
BLAST of Lsi11G016690 vs. ExPASy TrEMBL
Match: A0A1S3BM47 (probable tyrosine-protein phosphatase At1g05000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491358 PE=3 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 7.1e-106 Identity = 199/241 (82.57%), Postives = 203/241 (84.23%), Query Frame = 0
BLAST of Lsi11G016690 vs. ExPASy TrEMBL
Match: A0A5D3C1M8 (Putative tyrosine-protein phosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00050 PE=3 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103 Identity = 197/241 (81.74%), Postives = 201/241 (83.40%), Query Frame = 0
BLAST of Lsi11G016690 vs. ExPASy TrEMBL
Match: A0A6J1I2B5 (probable tyrosine-protein phosphatase At1g05000 OS=Cucurbita maxima OX=3661 GN=LOC111468382 PE=3 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.6e-102 Identity = 190/236 (80.51%), Postives = 196/236 (83.05%), Query Frame = 0
BLAST of Lsi11G016690 vs. ExPASy TrEMBL
Match: A0A0A0KE54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421640 PE=3 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 2.8e-102 Identity = 190/238 (79.83%), Postives = 199/238 (83.61%), Query Frame = 0
BLAST of Lsi11G016690 vs. ExPASy TrEMBL
Match: A0A6J1GJJ1 (probable tyrosine-protein phosphatase At1g05000 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454884 PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 9.0e-101 Identity = 188/236 (79.66%), Postives = 194/236 (82.20%), Query Frame = 0
BLAST of Lsi11G016690 vs. NCBI nr
Match: XP_038888263.1 (tyrosine-protein phosphatase DSP1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 415.6 bits (1067), Expect = 2.8e-112 Identity = 201/235 (85.53%), Postives = 207/235 (88.09%), Query Frame = 0
BLAST of Lsi11G016690 vs. NCBI nr
Match: XP_008449484.1 (PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucumis melo]) HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105 Identity = 199/241 (82.57%), Postives = 203/241 (84.23%), Query Frame = 0
BLAST of Lsi11G016690 vs. NCBI nr
Match: TYK05851.1 (putative tyrosine-protein phosphatase [Cucumis melo var. makuwa]) HSP 1 Score: 386.0 bits (990), Expect = 2.3e-103 Identity = 197/241 (81.74%), Postives = 201/241 (83.40%), Query Frame = 0
BLAST of Lsi11G016690 vs. NCBI nr
Match: XP_022969344.1 (probable tyrosine-protein phosphatase At1g05000 [Cucurbita maxima]) HSP 1 Score: 382.1 bits (980), Expect = 3.4e-102 Identity = 190/236 (80.51%), Postives = 196/236 (83.05%), Query Frame = 0
BLAST of Lsi11G016690 vs. NCBI nr
Match: XP_011657551.1 (probable tyrosine-protein phosphatase DSP4 isoform X1 [Cucumis sativus] >KGN47970.1 hypothetical protein Csa_002783 [Cucumis sativus]) HSP 1 Score: 381.3 bits (978), Expect = 5.8e-102 Identity = 190/238 (79.83%), Postives = 199/238 (83.61%), Query Frame = 0
BLAST of Lsi11G016690 vs. TAIR 10
Match: AT1G05000.2 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 240.0 bits (611), Expect = 1.9e-63 Identity = 119/193 (61.66%), Postives = 142/193 (73.58%), Query Frame = 0
BLAST of Lsi11G016690 vs. TAIR 10
Match: AT1G05000.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 231.5 bits (589), Expect = 6.9e-61 Identity = 114/190 (60.00%), Postives = 130/190 (68.42%), Query Frame = 0
BLAST of Lsi11G016690 vs. TAIR 10
Match: AT2G32960.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 228.0 bits (580), Expect = 7.6e-60 Identity = 121/214 (56.54%), Postives = 141/214 (65.89%), Query Frame = 0
BLAST of Lsi11G016690 vs. TAIR 10
Match: AT4G03960.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 218.0 bits (554), Expect = 7.9e-57 Identity = 111/199 (55.78%), Postives = 127/199 (63.82%), Query Frame = 0
BLAST of Lsi11G016690 vs. TAIR 10
Match: AT3G02800.1 (Tyrosine phosphatase family protein ) HSP 1 Score: 158.7 bits (400), Expect = 5.7e-39 Identity = 83/176 (47.16%), Postives = 111/176 (63.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|