Lsi11G016260 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G016260
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RWP-RK domain-containing protein
Location	chr11: 24613189 .. 24614861 (+)
RNA-Seq Expression	Lsi11G016260
Synteny	Lsi11G016260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGGTATATTAGCGGTTTCATGTTGGATTAGTTCCGCATAAGAATGTAATTGAACCAAACATTTTGGCAATTAGATGTTTCCGGAGTTGTGGACGTATATAATGGCTTTATCTTTGTGATCAATTTCGGTACAATTTACATTTTTGCTTTCTGAGTTGCTACAAATTGTTTCAAAATTGGAGAAATTTTGATATACCTATCGCTGTTAGTTGGTCGATGCCTTCGATTATTGGGCCAATCTATGGTAATTACGAACTAGTTACTTCTATTCGTTTCTTTGTTACACTTAGTATGTAAAGACTAAAGAGCGAGTGTGTTATGCTTGCATTAACAGGAGATATATTGTTTGCTTTTGCATCACCTGCATCAGATGTATTTTTCATATTGCAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTGTATGCATCGGATAATCTATTGAATTTCAAATAAATCAATGTTACCAACTTAGTATTTGATGGTCACTAATATTTTTGACATCGTTGTTATCCATTATATTTGAAATAAAAATAAAAATGTTTGTAGTTTATATCTATTTGGCCATCTCTGTTCTTCTTGAGAGGTTTAGTTCACAATCCATCTGCCCTTTCTTCCAACTGAAGTTTGCATTTACTGAGACTTGAGAGGTTCTCCTTGGTTCAACAGTTTACTTAGACTTGAGAAGTTTGCATTTAATGAATGTTTTGTTGTAATTGTGTCTCTAATCATGCTGTTGATAGTTCCTTTTGTTTTCGTATGTTATCAAAGTTTTATCTGGACAATATTTTTGTGAAATATAATTTTGCTGGCATTTGGGTTTAGTGATAGTTGTATAAGACATTTTGCTGTATTTCTCTTGTAATAATGCTTTTTGGATTTCATGCATACTACTAAACTAACAACTTCTATTCCTCTTTCTCACTTTCACTTTTATCATCCTACTCAGTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

mRNA sequence

ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

Coding sequence (CDS)

ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

Protein sequence

MCEIKPEEKGILRCRPTDLSTAIPAAALVRVTASSRPPLLFLTPSPNTSLCHFTGRCPVPYKQSLPIGIDQKIATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

Homology

[Close]

BLAST of Lsi11G016260 vs. ExPASy TrEMBL
Match: A0A6J1ERE4 (uncharacterized protein LOC111437021 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437021 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.9e-75
Identity = 165/238 (69.33%), Postives = 175/238 (73.53%), Query Frame = 0


Query: 18  DLSTAIPAAALVRVTASSRPPLLFLTPS---PNTSLCHFTGRCPVPYKQSLPIGIDQKIA 77
           DLST IPAAALVRV+        FL PS   PN    +F     +   Q  P  I Q   
Sbjct: 21  DLSTPIPAAALVRVS--------FLLPSTSLPNAITKYFPPSLSLVAAQCPPSNIQQ--- 80

Query: 78  TITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYG 137
                     VN+KMSKLNG PQSLQ   GNIN Q+RR  NVQSTNWVQGP SLDEFKYG
Sbjct: 81  ----------VNEKMSKLNGTPQSLQP--GNINAQIRRPLNVQSTNWVQGPTSLDEFKYG 140

Query: 138 FPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQ 197
           FPSGGLPSISNKWWGSSC DETNN  DDKHHFKVVNDG  S+IDQEKS SIEEDLQADLQ
Sbjct: 141 FPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQ 200

Query: 198 GTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           GT LLTALRKRS+ERGRKVLKHGN  HG  LNKLSKKE+SLLLNIFRSS P+EW+NNS
Sbjct: 201 GTHLLTALRKRSLERGRKVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEWINNS 235

[Close]

BLAST of Lsi11G016260 vs. ExPASy TrEMBL
Match: A0A6J1JJK7 (uncharacterized protein LOC111486389 OS=Cucurbita maxima OX=3661 GN=LOC111486389 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.6e-66
Identity = 137/167 (82.04%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 89  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWW 148
           MSKLNG PQSLQ   GNIN Q+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWW
Sbjct: 1   MSKLNGTPQSLQP--GNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWW 60

Query: 149 GSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVE 208
           GSSC DETNN   DKHHFKVVNDG  S+IDQEKS SIEEDLQADLQGT LLTALRKRS+E
Sbjct: 61  GSSCPDETNNEVGDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLE 120

Query: 209 RGRKVLKHGNYSHG---QSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           RGRKVLKHGN  HG     LNKLSKKE+SLLLNIFRSS P+EW+NNS
Sbjct: 121 RGRKVLKHGNSFHGHGLNKLNKLSKKERSLLLNIFRSSVPDEWINNS 165

[Close]

BLAST of Lsi11G016260 vs. ExPASy TrEMBL
Match: A0A6J1D407 (uncharacterized protein LOC111016830 OS=Momordica charantia OX=3673 GN=LOC111016830 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 6.9e-62
Identity = 131/166 (78.92%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 89  MSKLNGAPQS-LQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKW 148
           MSKLNGAPQS LQQQ GNIN QMRR Q+VQSTN VQG   L+EFKYGFPSGGLPS+SNKW
Sbjct: 1   MSKLNGAPQSLLQQQEGNINAQMRRPQHVQSTNLVQGSTMLNEFKYGFPSGGLPSLSNKW 60

Query: 149 WGSSCLDETNNGEDDKHHFK-VVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRS 208
           WGSS  DETNN ED KH+FK VV DG ISLIDQEKSESIEEDLQADL GTRLLTALRKRS
Sbjct: 61  WGSSAPDETNNEEDAKHNFKNVVADGSISLIDQEKSESIEEDLQADLPGTRLLTALRKRS 120

Query: 209 VERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           +ERGRK LK+G+Y H   +NKLSK+E+SLLLNIF+SS PNEW++NS
Sbjct: 121 MERGRKALKNGSYFHAHGVNKLSKRERSLLLNIFKSSIPNEWISNS 166

[Close]

BLAST of Lsi11G016260 vs. ExPASy TrEMBL
Match: A0A6J1ER19 (uncharacterized protein LOC111437021 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437021 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.2e-59
Identity = 137/205 (66.83%), Postives = 145/205 (70.73%), Query Frame = 0


Query: 18  DLSTAIPAAALVRVTASSRPPLLFLTPS---PNTSLCHFTGRCPVPYKQSLPIGIDQKIA 77
           DLST IPAAALVRV+        FL PS   PN    +F     +   Q  P  I Q   
Sbjct: 21  DLSTPIPAAALVRVS--------FLLPSTSLPNAITKYFPPSLSLVAAQCPPSNIQQ--- 80

Query: 78  TITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYG 137
                     VN+KMSKLNG PQSLQ   GNIN Q+RR  NVQSTNWVQGP SLDEFKYG
Sbjct: 81  ----------VNEKMSKLNGTPQSLQP--GNINAQIRRPLNVQSTNWVQGPTSLDEFKYG 140

Query: 138 FPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQ 197
           FPSGGLPSISNKWWGSSC DETNN  DDKHHFKVVNDG  S+IDQEKS SIEEDLQADLQ
Sbjct: 141 FPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQ 200

Query: 198 GTRLLTALRKRSVERGRKVLKHGNY 220
           GT LLTALRKRS+ERGRKVLKH  +
Sbjct: 201 GTHLLTALRKRSLERGRKVLKHDEW 202

[Close]

BLAST of Lsi11G016260 vs. ExPASy TrEMBL
Match: A0A7N2MCY2 (RWP-RK domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.6e-29
Identity = 86/179 (48.04%), Postives = 116/179 (64.80%), Query Frame = 0


Query: 86  NKKMSKLNGA--PQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSI 145
           N  MSK  GA  P +LQQQ G+ N Q  RSQN+ ST+  +G  +LDEFKYGFPS GL + 
Sbjct: 146 NSDMSKSKGAALPHNLQQQ-GSKNVQTLRSQNLLSTSLTKGIAALDEFKYGFPSNGLSTA 205

Query: 146 SNKWWGSS----CLDETNNG----EDDKHHFK--VVNDGFISLIDQEKSESIEEDLQADL 205
           SNKWWGSS    C  +  +G    EDDKH  +  VV+   + ++D+E+  + +ED     
Sbjct: 206 SNKWWGSSSPNGCEGKLGDGVETNEDDKHKSEEMVVDSPGVVIVDKEECVTGKEDSNIGP 265

Query: 206 QGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           QGT LLT +RKR+VE GR+ LK G +  G  +NK+ K+E++LLL IF+SS P +W+N S
Sbjct: 266 QGTGLLTTVRKRTVEEGREALKLGVF-RGYGINKIGKRERTLLLRIFKSSLPKQWINGS 322

[Close]

BLAST of Lsi11G016260 vs. NCBI nr
Match: XP_038887241.1 (uncharacterized protein LOC120077433 [Benincasa hispida])

HSP 1 Score: 295.8 bits (756), Expect = 3.5e-76
Identity = 150/164 (91.46%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 89  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWW 148
           MSKLNGAPQSL QQLGNIN QMRRSQNVQSTNWVQGP+SLDEFKYGFPSGGLPS+SNKWW
Sbjct: 1   MSKLNGAPQSL-QQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSLSNKWW 60

Query: 149 GSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVE 208
           GSSC DETNN EDDKHHFKVVNDGF SLID EKSESI EDLQADLQGT LLTALRKRSV 
Sbjct: 61  GSSCPDETNNEEDDKHHFKVVNDGFTSLIDPEKSESIGEDLQADLQGTHLLTALRKRSVV 120

Query: 209 RGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           RGRKVL+HG YSHGQSLNKLSKKEQSLLLNIFRSSTPNEWM+NS
Sbjct: 121 RGRKVLEHGYYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMSNS 163

[Close]

BLAST of Lsi11G016260 vs. NCBI nr
Match: XP_022930611.1 (uncharacterized protein LOC111437021 isoform X1 [Cucurbita moschata])

HSP 1 Score: 292.4 bits (747), Expect = 3.9e-75
Identity = 165/238 (69.33%), Postives = 175/238 (73.53%), Query Frame = 0


Query: 18  DLSTAIPAAALVRVTASSRPPLLFLTPS---PNTSLCHFTGRCPVPYKQSLPIGIDQKIA 77
           DLST IPAAALVRV+        FL PS   PN    +F     +   Q  P  I Q   
Sbjct: 21  DLSTPIPAAALVRVS--------FLLPSTSLPNAITKYFPPSLSLVAAQCPPSNIQQ--- 80

Query: 78  TITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYG 137
                     VN+KMSKLNG PQSLQ   GNIN Q+RR  NVQSTNWVQGP SLDEFKYG
Sbjct: 81  ----------VNEKMSKLNGTPQSLQP--GNINAQIRRPLNVQSTNWVQGPTSLDEFKYG 140

Query: 138 FPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQ 197
           FPSGGLPSISNKWWGSSC DETNN  DDKHHFKVVNDG  S+IDQEKS SIEEDLQADLQ
Sbjct: 141 FPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQ 200

Query: 198 GTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           GT LLTALRKRS+ERGRKVLKHGN  HG  LNKLSKKE+SLLLNIFRSS P+EW+NNS
Sbjct: 201 GTHLLTALRKRSLERGRKVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEWINNS 235

[Close]

BLAST of Lsi11G016260 vs. NCBI nr
Match: XP_023529351.1 (uncharacterized protein LOC111792233 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-68
Identity = 138/164 (84.15%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 89  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWW 148
           MSKLNG PQSLQ   GNIN Q+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWW
Sbjct: 1   MSKLNGTPQSLQP--GNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWW 60

Query: 149 GSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVE 208
           GSSC DETNN  DDKHHFKVVNDG  S+IDQEKS SIEEDLQADLQGT LLTALRKRS+E
Sbjct: 61  GSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLE 120

Query: 209 RGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           RGRKVLKHGN  HG  LNKLSKKE+SLLLNIFRSS P+EW+NNS
Sbjct: 121 RGRKVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEWINNS 162

[Close]

BLAST of Lsi11G016260 vs. NCBI nr
Match: XP_022989266.1 (uncharacterized protein LOC111486389 [Cucurbita maxima])

HSP 1 Score: 262.7 bits (670), Expect = 3.3e-66
Identity = 137/167 (82.04%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 89  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWW 148
           MSKLNG PQSLQ   GNIN Q+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWW
Sbjct: 1   MSKLNGTPQSLQP--GNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWW 60

Query: 149 GSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVE 208
           GSSC DETNN   DKHHFKVVNDG  S+IDQEKS SIEEDLQADLQGT LLTALRKRS+E
Sbjct: 61  GSSCPDETNNEVGDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLE 120

Query: 209 RGRKVLKHGNYSHG---QSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           RGRKVLKHGN  HG     LNKLSKKE+SLLLNIFRSS P+EW+NNS
Sbjct: 121 RGRKVLKHGNSFHGHGLNKLNKLSKKERSLLLNIFRSSVPDEWINNS 165

[Close]

BLAST of Lsi11G016260 vs. NCBI nr
Match: XP_022148047.1 (uncharacterized protein LOC111016830 [Momordica charantia])

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-61
Identity = 131/166 (78.92%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 89  MSKLNGAPQS-LQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKW 148
           MSKLNGAPQS LQQQ GNIN QMRR Q+VQSTN VQG   L+EFKYGFPSGGLPS+SNKW
Sbjct: 1   MSKLNGAPQSLLQQQEGNINAQMRRPQHVQSTNLVQGSTMLNEFKYGFPSGGLPSLSNKW 60

Query: 149 WGSSCLDETNNGEDDKHHFK-VVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRS 208
           WGSS  DETNN ED KH+FK VV DG ISLIDQEKSESIEEDLQADL GTRLLTALRKRS
Sbjct: 61  WGSSAPDETNNEEDAKHNFKNVVADGSISLIDQEKSESIEEDLQADLPGTRLLTALRKRS 120

Query: 209 VERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           +ERGRK LK+G+Y H   +NKLSK+E+SLLLNIF+SS PNEW++NS
Sbjct: 121 MERGRKALKNGSYFHAHGVNKLSKRERSLLLNIFKSSIPNEWISNS 166

[Close]

BLAST of Lsi11G016260 vs. TAIR 10
Match: AT1G06500.1 (unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-12
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 118 STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLI 177
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +      +G  +        +G ++  
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRAEKGGREDGGGEN-----TENGHVAAC 80

Query: 178 DQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLL 237
           D+ ++                L A+RKR  E GR+ ++ G +  G    +  K++Q+LL 
Sbjct: 81  DETQNS---------------LVAIRKRIAEEGREAVELGLH-QGFGSKRPGKRDQALLF 131

Query: 238 NIFRSSTPNEWM 250
            IF S+ P +W+
Sbjct: 141 QIFNSAMPKDWV 131

[Close]

BLAST of Lsi11G016260 vs. TAIR 10
Match: AT1G06500.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-12
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 118 STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLI 177
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +      +G  +        +G ++  
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRAEKGGREDGGGEN-----TENGHVAAC 80

Query: 178 DQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLL 237
           D+ ++                L A+RKR  E GR+ ++ G +  G    +  K++Q+LL 
Sbjct: 81  DETQNS---------------LVAIRKRIAEEGREAVELGLH-QGFGSKRPGKRDQALLF 131

Query: 238 NIFRSSTPNEWM 250
            IF S+ P +W+
Sbjct: 141 QIFNSAMPKDWV 131

[Close]

BLAST of Lsi11G016260 vs. TAIR 10
Match: AT1G06500.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-12
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 118 STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLI 177
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +      +G  +        +G ++  
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRAEKGGREDGGGEN-----TENGHVAAC 80

Query: 178 DQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLL 237
           D+ ++                L A+RKR  E GR+ ++ G +  G    +  K++Q+LL 
Sbjct: 81  DETQNS---------------LVAIRKRIAEEGREAVELGLH-QGFGSKRPGKRDQALLF 131

Query: 238 NIFRSSTPNEWM 250
            IF S+ P +W+
Sbjct: 141 QIFNSAMPKDWV 131

[Close]

BLAST of Lsi11G016260 vs. TAIR 10
Match: AT1G06500.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-12
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 118 STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLI 177
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +      +G  +        +G ++  
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRAEKGGREDGGGEN-----TENGHVAAC 80

Query: 178 DQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLL 237
           D+ ++                L A+RKR  E GR+ ++ G +  G    +  K++Q+LL 
Sbjct: 81  DETQNS---------------LVAIRKRIAEEGREAVELGLH-QGFGSKRPGKRDQALLF 131

Query: 238 NIFRSSTPNEWM 250
            IF S+ P +W+
Sbjct: 141 QIFNSAMPKDWV 131

The following BLAST results are available for this feature:

BLAST of Lsi11G016260 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi11G016260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERE4	1.9e-75	69.33	uncharacterized protein LOC111437021 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JJK7	1.6e-66	82.04	uncharacterized protein LOC111486389 OS=Cucurbita maxima OX=3661 GN=LOC111486389...	[more]
A0A6J1D407	6.9e-62	78.92	uncharacterized protein LOC111016830 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1ER19	3.2e-59	66.83	uncharacterized protein LOC111437021 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A7N2MCY2	2.6e-29	48.04	RWP-RK domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Lsi11G016260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887241.1	3.5e-76	91.46	uncharacterized protein LOC120077433 [Benincasa hispida]	[more]
XP_022930611.1	3.9e-75	69.33	uncharacterized protein LOC111437021 isoform X1 [Cucurbita moschata]	[more]
XP_023529351.1	1.2e-68	84.15	uncharacterized protein LOC111792233 [Cucurbita pepo subsp. pepo]	[more]
XP_022989266.1	3.3e-66	82.04	uncharacterized protein LOC111486389 [Cucurbita maxima]	[more]
XP_022148047.1	1.4e-61	78.92	uncharacterized protein LOC111016830 [Momordica charantia]	[more]

BLAST of Lsi11G016260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06500.1	1.7e-12	31.06	unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bac...	[more]
AT1G06500.2	1.7e-12	31.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06500.3	1.7e-12	31.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06500.4	1.7e-12	31.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G016260.1	Lsi11G016260.1	mRNA