Lsi11G016210 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi11G016210
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr11: 24543545 .. 24546492 (+)
RNA-Seq ExpressionLsi11G016210
SyntenyLsi11G016210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGTTTAATTAAGTTCCACACAAGCCTAATCAGAAATTAATTATTGACTGATTGCAGTTGCTTCAATTTCTTCAGTCTTTAATCCCTTTCCCTCACGAAACCCACTTCAATTAATTTCTCAACATTTTTTTTTTTAAATTTTCATCACTGATTTAAGCTGATGGATGAACTTTGAAATGGAAACTTAGGATTTTTTATTTGTTTATTACAATTCTCAGGTGACACATAAGAAAGAAAGGTTCTATTTGTAAAATAATGTTCTTTTTTACCTAAAAAATAGGTGATATGACGTAGGGCTTTAAATTCTTGAATTTTGATTAGTCAAAATTAAAAATTTTGTTTATTTGTTTATGACTTCCACATGAATATGAGAGATAGAGATAGAGATAGAGATAGAGATAGAGATAGAGAGGGATAGAAAGGGATATTCACAATTTTCTTAATATGTTGACTTTGTCATTGGGAGATATTATTATTTAAATAGGTAGAAGTCAATTAAATTAGTTTGACTTAAATGGAGGCTAATTTTGTCAGACCATGTGATGTTTACTGTTTCACGATAAACCCAAATGGAATGGCTTGCGTACATATCTTAGTCTCATCTCATCCACACAAACCCTTTCCCTTTTTTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTCTTTTTCTTTTTCTGTCCTTATTTTCATCAGTTTTGTCGGTTACTGTTCCAGTTATGCCTCTTCGTCTTAATGAATTATAATCGTTATCTATCCATTTCAAAAATTGTATACCACATCATTCCAACCCCTCCGGTAAGTTCCATTTTTGTCCTTTTTAGACTCTTTTTTTCTTAAAAAAATAAAATAAAATAAAGATAGTCTAGAGCTAAAAGTTAGTAAAACTCAACGATAATTGACATGACATTTCTTCTTAGAAGTCGAAAGTTCGATTCTCATTTCCGCAATTGTTGTACTAAAAAAAATAAATCAAGACAGTCAAAAGAAGTTTTTAGATGTTTGTTGTTATGACTTAGGAGTGATTTTAGATCAAATGATATAATCGACATAAGCAAAAATGTAAATAACAAAGTCAAGATCAGATAGTTGGGCCGAAAGAGGCAACTTAAGACCAAAATGAGCCTAGAAAAGGTAGACGACTTGGGCCTTGGTCCAAGCCAACGTGCTCAGCCTTAGCCAAGCCTCACAAAATACCTAAGGAGGCATGCTTCAAACATGCCCTGTCCCAAGTGATCGCATTAGGCCCAAAATAGGGCTAAGATAAGGTAGAGGTCAAGGCCAACCCTAGCAAAATACCAAACAGGGCACGCCCCACTTAGTGAGTTAAAGGTTAATCCCAATGCAACTCCGAAATCATATTGGGAAGTACCTAAATCAAGTACACCAATAAATCTATCATGGTATAGACTCTTTACTTACTATACAAATATCACTTTCTGACATAAGCATCAGAGTCTATATTACAAGCACCACATTGGTGTGCAAATCTTTCTATCTTACAGGTCACGATTTTCTCCAAATTATAAATTTATAGTTGTCGTATGAGAGTTGGATGTGTTTTCTCAATTCTTGCATCAACATCTATAATAGTAGATGCTCTAATATATATATATATATATATATATATATATATATATATATATAACATATCTTTAAATAATAATGTTTGTTTTACAAAATAATTTGTAAAGATGTGTGAAAATATGTAGATAGTCATACTTCTTTTGCACGAATGAATCAAAATGCCTCGAATTAGATACCTCCTACAAGCGCATCCTAAGATGTATGGATACCTGAATATACTTTAACATCTTACAAAACTCTCCAAAGTCTCATGAAACAGATGACCTCTTACAAGTTTCAAATGCATTTCAAAATTTCACACATTACTACAACATACAATTTCATATCCCTATAAACATCTATTAATTAGCCTGAACAAAAGAACTAGGTTTAATTTTTGTTTAATAAATTATTAGAAGAAGAAAAACAAGGAATCAGCAGTTATAATTAGAAGTATTTTCTGACCTGTAGAATGTTTTTTATTTGGGTTCTTTTCACAAATAGAAAAAAAATAAAAATAATTACACATATAGAAAAAAAAAAGTGAAAAATACAAAAGCATGGGATGCATTTTTTTCTATATGTAAATCACAACTATTCATGTTTGAATGCATGTACCACGAATTTCTTGGCGTATGGAGTTGTATGTCTCATAAGTTGCATCATCCATCAGAATCATTGAATTGAAAATTTTTATATTCTTTTTTATTACCATGCAATTGCTTGCAGAACATCGATCGGTCCAATCCACTACGGTCATCATTTAAGTTCATTTAAATTTTAATCTGTTACATTCAACATCGTCTTACCTATATATAATCAATATATCAATAAGCTAGTTTGTAAGAAAACACGTGTTCGTCAAATAATATCCTATGAAACTTTTACACATATCCTCTCAATGTTTCATATTTTAATTTTCGTCCAAAATTCTAAAGAATTTCTATTGAAAAATAGTTTAAAACATTTATAAAGGAGCCCAAAATATTGATTTTAAACAAAGAAAAAAAAAAGGTTTTTTTTCCTTATTTAGCGGGAAAAGAAAATGCTATTGAGTTTTTTTTTTTTAATATCCGTGAGTGTCCGGACTAGTTTACGCACCTCTCACGGGACAACCCGCCTGACCCTACAATATTTTGGTGTCAAAGAAACTCGTAAGAAATTAATTCCTAGGTAGGTGGCCATCATGGATTGAACCCATAACCTCTTAGTTATTTATTGAGACTTTTGTATCCTTTTTTACTACTAGGTCAACCCATGATGGTTGAAAAGGCTATTGAGTTCATCGGGCAGAAACAAACTCAGAAACGTAGAAAGGAAAAGCAAAGTGCAAAAACCAACGAAAAACACAGTGAAGAAGAAGACTCATGCTTTTCTCATTAA

mRNA sequence

ATGGACTTTTGTCGGTTACTGTTCCAGTTATGCCTCTTCGTCTTAATGAATTATAATCGTTATCTATCCATTTCAAAAATTGTATACCACATCATTCCAACCCCTCCGAACATCGATCGGTCCAATCCACTACGTGTCCGGACTAGTTTACGCACCTCTCACGGGACAACCCGCCTGACCCTACAATATTTTGGTGTCAAAGAAACTCGTCAACCCATGATGGTTGAAAAGGCTATTGAGTTCATCGGGCAGAAACAAACTCAGAAACGTAGAAAGGAAAAGCAAAGTGCAAAAACCAACGAAAAACACAGTGAAGAAGAAGACTCATGCTTTTCTCATTAA

Coding sequence (CDS)

ATGGACTTTTGTCGGTTACTGTTCCAGTTATGCCTCTTCGTCTTAATGAATTATAATCGTTATCTATCCATTTCAAAAATTGTATACCACATCATTCCAACCCCTCCGAACATCGATCGGTCCAATCCACTACGTGTCCGGACTAGTTTACGCACCTCTCACGGGACAACCCGCCTGACCCTACAATATTTTGGTGTCAAAGAAACTCGTCAACCCATGATGGTTGAAAAGGCTATTGAGTTCATCGGGCAGAAACAAACTCAGAAACGTAGAAAGGAAAAGCAAAGTGCAAAAACCAACGAAAAACACAGTGAAGAAGAAGACTCATGCTTTTCTCATTAA

Protein sequence

MDFCRLLFQLCLFVLMNYNRYLSISKIVYHIIPTPPNIDRSNPLRVRTSLRTSHGTTRLTLQYFGVKETRQPMMVEKAIEFIGQKQTQKRRKEKQSAKTNEKHSEEEDSCFSH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G016210.1Lsi11G016210.1mRNA