
Lsi11G015770 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCCAGAAAATGGACAACAATTAAGTGTTCCACCAGGCTTTCGTTTCCATCCAACTGATGAGGAGCTTCTTTATTACTACCTTAAGAAGAAGGTTTCGTATGAAGCCATTGAGCTTGATGTTATCAGGGAAGTGGATCTAAACAAACTAGAGCCTTGGGACCTCAAAGGTTATTTATTGATTATTATTATTAATTCTTTAGTGTTAAAAGTTTGATATTCAAATAGAAAAATAAGATAAACTATTTACACAAAATAGTAAAATTATGATAGACCCTGATAGAAGTGTATCAGAGTCTATCAATCATAAAAATGATAAAAGTCTATCACTAATAGATGCTGATAGAAGTCTATCAGTGTTTTCTTTTGCTATTTTCTGTAAATAGTTATATAGATTATCTTATTTTTAATTTTCATATAGATACTCTTAATATTCTCTCATTTATCCTATTTTTGCATAAATTTTTTTCACAAAACATTAACTGAACTTCAAGTTAAATCACAAAATCATACAAAATTTAAAATAAAAACAATAAATAGTTAAATACAAAAAGAACATATGTGGCGCTAAATACAAAAAGAAGTCTATTAGAGTCTATTACGGATAGAAATGATAGAAGTACGTCTATGCTGATAGAAGTCTATTAATGTTTATTAGTGTGTTTTTTTTTTACTATTTTCTATAAATAGTTTGACATTTTTTCTAACCGTAAAAATTATCTAATAAACCTAGAAGATCATGGTTTTTTGGTTTTGATTTAACAATTAGCTAAGGAAATTGGGTTAGTAGATTCATTTGCATGGACGTAGATGTTCTCTTGTAGATACATATATATAAATCTAAATAAACAAAAAGAATAATATATGTGTTAATTTTTGGTTATTTTAGATAAATGTAGAATTGGATCTGGGCATCAAAATGAGTGGTATTTCTTTAGCCATAAGGATAAAAAATATCCAACTGGAACTCGAACGAATAGAGCAACGAGTGCTGGATTTTGGAAGGCAACAGGGAGAGACAAAACAATTCACATGAGCAATTGCAATTCCAAAAGGATTGGGATGAGGAAGACATTGGTGTTCTACACAGGTCGTGCTCCTCATGGCCAAAAGACTGATTGGATCATGCATGAATACCGTCTTGAAGATGACAATCCCGAGGTTTATATATATATATATATATATATATATATATATATATATATATATATATATTTGTTATTATTATTATTTTTTTTTTTCAAAGGAAATTACCCTTGTTTCCTTCCCTAGATTTTAGTTACGTTTTATATATTATATTTATAGCTAGGCCGCTCATAGGCAAAAATTAGCTCCATCTCAATGTTACCCAAGTATGCTAACAGATTTGATAATGTTTATACCCATTTGTTTTTTTTTAAATTTAGCTTATAAACAAATATGTATTCATTTTTTACTTATATTTTAAAAAACCAACCTAAAATTTAAAAATTAAAAAAACATATATATATATATATATATATATATATATATATATATATATAGAAAATTTTCACAGATAAAAAAAATTGTCAAACTATTTACAGAAAATAGCAAAAAAACACGGATAGATATTGATAGGCTTCTATCCGCGTCTATCACAACTACCTAAAAATTTTGCTATTTTGTGTAAATAGTTTCCCTTGTTTTTCTATTTTTAAAAATCTCTCTCTATATATATATATATATATACAATTTTTAAAAACAGAAAAATAAAGGAAACTATTTACACAAAATAGCAACATTTTTAGATAGTTGTGATATACGCCCATAAAAGTCTATCAAGGTCTATCAATGTCTATTAGTATTTTTTTTTTTGTTATTTTCTGTAAATAGTTTGACATTTTTTCTATTTGTGAAAATTTTTCTATATATATATTCAATTAAACAAATTTTTATTTTTAAAATTTAATTAAGAATTTAAGTATTTCAAATTATAATAGACATAAATTTTAAAAAATAAAATCAATACCAAATGAGACCTTAATAAAGTAAAAAAAATTTAAAAATAAAAAAATAAGGAAAACTATTTACACAAAATAGCAAAATTTTTAAATAGTTATGATAGATACTGATATAAGTCTATCATATCTATCTGTGATAGAAATTATAGAAATCTATGACTGATCGATGCTCATAGAAGTCTATCAATATTTTTTCTGTTATTTTCAATAAATAGTTTGACATGTTTTCTAATCTATGAAAATTTGTCTTAATAAAACCTATCTAACTAACCAAAGTAAAAAGACCATGTGTTCGAACTTGGTCAAAAGGTTCAAATCTCTCCCATCTTAATTACATTAAGCTGATTCATTTAATAACAAAATTTAGATAATAAATTTCAAAAAGCCAAATACTAAATGGAAGGAAGGAGCTAGGGTGATGATCTCTGTTGAATTCCAACTTGTGAAATGGGGTTTTTTTCTTCTTTTAATTATATAGCTGCAGGAAGATGGGTGGGTGGTGTGCAGAGTTTTCAAGAAGAAAAGTCACAAGCCAGAGGTTCCACAAGAGCAGCAGTTAGATTACTATGCGCATACGAAGTTAGGTAGCAGTTCTGCTTCTGCCGTGGGTGCAGAAATGGGAGAGCCAAAAAACAATAATAATCATATGCAAGCAGAGCCATATAATAATAATAATTATAGCTTTGATGGTTGCATGCAGCTGCCGCAGCTGTTTAGTCCAGAGTCGTCAGTTGCAACACCTATCTCTTTAAACGCCACCGCCACTGCCGCCGCGGCTGCCGTTGAGTGTCCTCAAAATATCTGGAGGCTAAGTTGCGGGCTCGTGCAACATGAGCGGTTGAACACTGATTGGTCGTTCTTGAATAGGCTGCTTGCTTTGGATCAACAATCCCGTTCCATATCTACGCCTTCGGATGACCTTACTATGGGACACCCCAACTCCAGAAAGTTTTCATTTCCATTTCCATATCCTTATCCTCTTGCTTCTGCTGCCGACTTTATCAAATTCTCCAAGTAG ATGATGCCAGAAAATGGACAACAATTAAGTGTTCCACCAGGCTTTCGTTTCCATCCAACTGATGAGGAGCTTCTTTATTACTACCTTAAGAAGAAGGTTTCAATTGGATCTGGGCATCAAAATGAGTGGTATTTCTTTAGCCATAAGGATAAAAAATATCCAACTGGAACTCGAACGAATAGAGCAACGAGTGCTGGATTTTGGAAGGCAACAGGGAGAGACAAAACAATTCACATGAGCAATTGCAATTCCAAAAGGATTGGGATGAGGAAGACATTGGTGTTCTACACAGGTAGCAGTTCTGCTTCTGCCGTGGGTGCAGAAATGGGAGAGCCAAAAAACAATAATAATCATATGCAAGCAGAGCCATATAATAATAATAATTATAGCTTTGATGGTTGCATGCAGCTGCCGCAGCTGTTTAGTCCAGAGTCGTCAGTTGCAACACCTATCTCTTTAAACGCCACCGCCACTGCCGCCGCGGCTGCCGTTGAGTGTCCTCAAAATATCTGGAGGCTAAGTTGCGGGCTCGTGCAACATGAGCGGTTGAACACTGATTGGTCGTTCTTGAATAGGCTGCTTGCTTTGGATCAACAATCCCGTTCCATATCTACGCCTTCGGATGACCTTACTATGGGACACCCCAACTCCAGAAAGTTTTCATTTCCATTTCCATATCCTTATCCTCTTGCTTCTGCTGCCGACTTTATCAAATTCTCCAAGTAG ATGATGCCAGAAAATGGACAACAATTAAGTGTTCCACCAGGCTTTCGTTTCCATCCAACTGATGAGGAGCTTCTTTATTACTACCTTAAGAAGAAGGTTTCAATTGGATCTGGGCATCAAAATGAGTGGTATTTCTTTAGCCATAAGGATAAAAAATATCCAACTGGAACTCGAACGAATAGAGCAACGAGTGCTGGATTTTGGAAGGCAACAGGGAGAGACAAAACAATTCACATGAGCAATTGCAATTCCAAAAGGATTGGGATGAGGAAGACATTGGTGTTCTACACAGGTAGCAGTTCTGCTTCTGCCGTGGGTGCAGAAATGGGAGAGCCAAAAAACAATAATAATCATATGCAAGCAGAGCCATATAATAATAATAATTATAGCTTTGATGGTTGCATGCAGCTGCCGCAGCTGTTTAGTCCAGAGTCGTCAGTTGCAACACCTATCTCTTTAAACGCCACCGCCACTGCCGCCGCGGCTGCCGTTGAGTGTCCTCAAAATATCTGGAGGCTAAGTTGCGGGCTCGTGCAACATGAGCGGTTGAACACTGATTGGTCGTTCTTGAATAGGCTGCTTGCTTTGGATCAACAATCCCGTTCCATATCTACGCCTTCGGATGACCTTACTATGGGACACCCCAACTCCAGAAAGTTTTCATTTCCATTTCCATATCCTTATCCTCTTGCTTCTGCTGCCGACTTTATCAAATTCTCCAAGTAG MMPENGQQLSVPPGFRFHPTDEELLYYYLKKKVSIGSGHQNEWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDKTIHMSNCNSKRIGMRKTLVFYTGSSSASAVGAEMGEPKNNNNHMQAEPYNNNNYSFDGCMQLPQLFSPESSVATPISLNATATAAAAAVECPQNIWRLSCGLVQHERLNTDWSFLNRLLALDQQSRSISTPSDDLTMGHPNSRKFSFPFPYPYPLASAADFIKFSK Homology
BLAST of Lsi11G015770 vs. ExPASy Swiss-Prot
Match: Q9MA17 (Protein SOMBRERO OS=Arabidopsis thaliana OX=3702 GN=SMB PE=1 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 9.9e-39 Identity = 119/304 (39.14%), Postives = 145/304 (47.70%), Query Frame = 0
BLAST of Lsi11G015770 vs. ExPASy Swiss-Prot
Match: Q5Z6B6 (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC076 PE=2 SV=2) HSP 1 Score: 149.8 bits (377), Expect = 3.9e-35 Identity = 78/124 (62.90%), Postives = 86/124 (69.35%), Query Frame = 0
BLAST of Lsi11G015770 vs. ExPASy Swiss-Prot
Match: Q84WP6 (NAC domain-containing protein 43 OS=Arabidopsis thaliana OX=3702 GN=NAC043 PE=2 SV=2) HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31 Identity = 73/121 (60.33%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of Lsi11G015770 vs. ExPASy Swiss-Prot
Match: Q9M274 (NAC domain-containing protein 66 OS=Arabidopsis thaliana OX=3702 GN=NAC066 PE=2 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 3.4e-31 Identity = 72/121 (59.50%), Postives = 80/121 (66.12%), Query Frame = 0
BLAST of Lsi11G015770 vs. ExPASy Swiss-Prot
Match: Q9SV87 (Protein BEARSKIN2 OS=Arabidopsis thaliana OX=3702 GN=BRN2 PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 4.4e-31 Identity = 72/115 (62.61%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of Lsi11G015770 vs. ExPASy TrEMBL
Match: A0A1S3BFZ6 (NAC domain-containing protein 76 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489615 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 2.1e-92 Identity = 210/334 (62.87%), Postives = 215/334 (64.37%), Query Frame = 0
BLAST of Lsi11G015770 vs. ExPASy TrEMBL
Match: A0A1S4DWK2 (NAC domain-containing protein 76 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489615 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.7e-92 Identity = 210/335 (62.69%), Postives = 215/335 (64.18%), Query Frame = 0
BLAST of Lsi11G015770 vs. ExPASy TrEMBL
Match: A0A5D3CQC6 (NAC domain-containing protein 76 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold818G00060 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 3.6e-92 Identity = 210/334 (62.87%), Postives = 215/334 (64.37%), Query Frame = 0
BLAST of Lsi11G015770 vs. ExPASy TrEMBL
Match: A0A0A0K475 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G252700 PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 4.7e-92 Identity = 209/335 (62.39%), Postives = 215/335 (64.18%), Query Frame = 0
BLAST of Lsi11G015770 vs. ExPASy TrEMBL
Match: A0A5A7V0C1 (NAC domain-containing protein 76 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold374G00040 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.8e-91 Identity = 209/334 (62.57%), Postives = 214/334 (64.07%), Query Frame = 0
BLAST of Lsi11G015770 vs. NCBI nr
Match: XP_038876675.1 (NAC domain-containing protein 76-like [Benincasa hispida]) HSP 1 Score: 380.6 bits (976), Expect = 1.0e-101 Identity = 212/327 (64.83%), Postives = 218/327 (66.67%), Query Frame = 0
BLAST of Lsi11G015770 vs. NCBI nr
Match: XP_008447060.1 (PREDICTED: NAC domain-containing protein 76 isoform X2 [Cucumis melo]) HSP 1 Score: 348.6 bits (893), Expect = 4.3e-92 Identity = 210/334 (62.87%), Postives = 215/334 (64.37%), Query Frame = 0
BLAST of Lsi11G015770 vs. NCBI nr
Match: XP_016900365.1 (PREDICTED: NAC domain-containing protein 76 isoform X1 [Cucumis melo] >XP_016900366.1 PREDICTED: NAC domain-containing protein 76 isoform X1 [Cucumis melo] >XP_016900367.1 PREDICTED: NAC domain-containing protein 76 isoform X1 [Cucumis melo] >XP_016900368.1 PREDICTED: NAC domain-containing protein 76 isoform X1 [Cucumis melo] >XP_016900369.1 PREDICTED: NAC domain-containing protein 76 isoform X1 [Cucumis melo]) HSP 1 Score: 348.2 bits (892), Expect = 5.7e-92 Identity = 210/335 (62.69%), Postives = 215/335 (64.18%), Query Frame = 0
BLAST of Lsi11G015770 vs. NCBI nr
Match: TYK13388.1 (NAC domain-containing protein 76 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 347.8 bits (891), Expect = 7.4e-92 Identity = 210/334 (62.87%), Postives = 215/334 (64.37%), Query Frame = 0
BLAST of Lsi11G015770 vs. NCBI nr
Match: XP_004148307.1 (NAC domain-containing protein 76 [Cucumis sativus] >XP_031744407.1 NAC domain-containing protein 76 [Cucumis sativus] >XP_031744409.1 NAC domain-containing protein 76 [Cucumis sativus] >KGN44313.1 hypothetical protein Csa_016646 [Cucumis sativus]) HSP 1 Score: 347.4 bits (890), Expect = 9.7e-92 Identity = 209/335 (62.39%), Postives = 215/335 (64.18%), Query Frame = 0
BLAST of Lsi11G015770 vs. TAIR 10
Match: AT1G79580.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 161.8 bits (408), Expect = 7.0e-40 Identity = 119/304 (39.14%), Postives = 145/304 (47.70%), Query Frame = 0
BLAST of Lsi11G015770 vs. TAIR 10
Match: AT1G79580.2 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 161.8 bits (408), Expect = 7.0e-40 Identity = 119/304 (39.14%), Postives = 145/304 (47.70%), Query Frame = 0
BLAST of Lsi11G015770 vs. TAIR 10
Match: AT1G79580.3 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 161.8 bits (408), Expect = 7.0e-40 Identity = 119/304 (39.14%), Postives = 145/304 (47.70%), Query Frame = 0
BLAST of Lsi11G015770 vs. TAIR 10
Match: AT2G46770.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32 Identity = 73/121 (60.33%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of Lsi11G015770 vs. TAIR 10
Match: AT3G61910.1 (NAC domain protein 66 ) HSP 1 Score: 136.7 bits (343), Expect = 2.4e-32 Identity = 72/121 (59.50%), Postives = 80/121 (66.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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