Lsi11G015040 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACAAATATATATAAATTCTTTCGTGGACTATGAGTCCTTCATCACAGAGACTTGAAGTTTTCAACTTTCATCTTCATAACTAATTAAATCTTTCTCTCTTTCTTCATCTTTTTGTTCAAAGATTATGGTTAGAGCTCCATTTTATGATGAAAATGGAGTTAAAAAAGGTGCATGGAGTGCTGAAGAAGATGAGAAACTCAAAGCTTATGTTCAACAACATGGCCATTGCAATTGGCGAGAGCTCCCTAAATATGCTGGTAATTTTAATTACCTTCATTCATTAATTCATATTAACTTCTAATTAAAAAAACCCTTTAATTATAACATATTTGATCTTGATGTTCCTCTTTTCTCTTAACTTATTTACTTAAAACAAAACAACCCATTTGAAAAAATGACTCCTTTTAACTTAATTCATTTTGTTTTCTCAATTGCTTTAGTAAACCCTTATATGGAGATGAATTTTGGACATACATACCCCATTAAGTTTTAATTTCGATTTTCTTCTTTCTTTGAAGTTGTTTAGTAAAATCGCAAATAACCCATTTGAAAAGATGGCCCCTTTTAGTTCATTTTGTTTTCAATTATGCTTTAATAAACCTTATATAGAGATGATTTTTGGACATACCCATTAAGTTTTAATTTCGATTTTCTTCTTTCTTTGAAGTTGTTTAGGAAAATTACAAATAGTGGCCCCTTTTACTTGAATTTTGTTTTCAATTGCTTTTAAAAACCCTTATAGAGAGATGAATTGGATATTTTCATTTAGTTTAATTTTGATTTTCTTCTTTCTTTGAAGTTGTTTAGTAAAATCACTAATAACCCATTTGAAAAGATGGTCCCTTTCGCTTAATTTTGTTTTCAATTATGCTTTGATAAACCGTATATAGAGAGATGGATGGATTGGAGATTGCCATTAAGTTTAATTTCGAGCTTCTTCTTTCTTTGATGTCTTCTTTTACTTACTTTTGCTTTCAATTGCTTTAATAAACTTGGTGATGCATATAACTTAGTATTTCTTAATGTTCTTGATATTGTGCTCTCAATTCTTAATGATCTTTGAATATTTAATTGGGATACTAAGATTTGGTTATGATTTTTTTTCATAATTAGGTTTGTTGAGGTGTGGCAAAAGTTGTAGACTGCGTTGGATTAATTACCTTCGTCCGGATGTGAAAAGAGGAAATTACTCCAAAGAAGAAGAACAACTAATCCTCCAATTGCATCAACAACATGGAAACAAGTATGTTTATTTTTCTTCTAATATTCATCAAATATCCCCAAACCCAAAACCATTATTATTCAAGTTTAAATTTCAATATTAATTAATATTACATGTTATCAAAACTACAATCAATTCATAATATATGCCCTATGAGATGATATCATTGCTTCTTCTTCTATCAAAACTACATTCTTAGGTTAAATTGGTTTGTAATAGTTAATGATTATGATTTTTTTTTCTTTAGATGGTCATTGATATCTTCAAAATTGTCGGGACGAACGGATAACGAAATAAAGAATTATTGGCACACCCATTTAAAGAAGGTAAAAAGTAACAAGGTTACAAAGAAGCAACAAAATGAGGAAAGTTGGAAGCAAAAATCCATTCAAAAAAGAGAAACATTAGAAATGACAAACCAAATTCCTTGTCATCAGATTATAATTGAAAGCTCTCCATTTTCCCCTTTGTCATCTGAAATTTCCACTGTCTGCTCCAATCAAGAATCCACAGAAGATAGCCTTCCAACAACATTCAAGTTTCAAGAACCATATGATAACAATGGAGATTTTTGGGCTAATCCATTTCTAGCAGACAATTTGGAAGCTGAAAGTGAAAACTCAATGAACTTTGATTTTATTGGAGGATTCAATCCACCTTATGATTTGGAGTTTGATGAAAACTACTTATTCCACCAAGTAATGAAAGAATTGCCTGAGAATTATCAACCCCATTTGTATCCCTCCTGAAAAATTCTATATGTATATATATATATATATATATATTATATGAGTGATTATGGTAGAACTTTGTTACATCAAAGAATTGTCTGTCACATTATATATAAATAATACATGTCAAGGACTATGGAGAGAGATGGACATTCTTGTAAATAGTTGTTCGAGAGGATGTATTAAAAAGATGTAACGTTCTCAATCTTAA CACAAATATATATAAATTCTTTCGTGGACTATGAGTCCTTCATCACAGAGACTTGAAGTTTTCAACTTTCATCTTCATAACTAATTAAATCTTTCTCTCTTTCTTCATCTTTTTGTTCAAAGATTATGGTTAGAGCTCCATTTTATGATGAAAATGGAGTTAAAAAAGGTGCATGGAGTGCTGAAGAAGATGAGAAACTCAAAGCTTATGTTCAACAACATGGCCATTGCAATTGGCGAGAGCTCCCTAAATATGCTGGTTTGTTGAGGTGTGGCAAAAGTTGTAGACTGCGTTGGATTAATTACCTTCGTCCGGATGTGAAAAGAGGAAATTACTCCAAAGAAGAAGAACAACTAATCCTCCAATTGCATCAACAACATGGAAACAAATGGTCATTGATATCTTCAAAATTGTCGGGACGAACGGATAACGAAATAAAGAATTATTGGCACACCCATTTAAAGAAGGTAAAAAGTAACAAGGTTACAAAGAAGCAACAAAATGAGGAAAGTTGGAAGCAAAAATCCATTCAAAAAAGAGAAACATTAGAAATGACAAACCAAATTCCTTGTCATCAGATTATAATTGAAAGCTCTCCATTTTCCCCTTTGTCATCTGAAATTTCCACTGTCTGCTCCAATCAAGAATCCACAGAAGATAGCCTTCCAACAACATTCAAGTTTCAAGAACCATATGATAACAATGGAGATTTTTGGGCTAATCCATTTCTAGCAGACAATTTGGAAGCTGAAAGTGAAAACTCAATGAACTTTGATTTTATTGGAGGATTCAATCCACCTTATGATTTGGAGTTTGATGAAAACTACTTATTCCACCAAGTAATGAAAGAATTGCCTGAGAATTATCAACCCCATTTGTATCCCTCCTGAAAAATTCTATATGTATATATATATATATATATATATTATATGAGTGATTATGGTAGAACTTTGTTACATCAAAGAATTGTCTGTCACATTATATATAAATAATACATGTCAAGGACTATGGAGAGAGATGGACATTCTTGTAAATAGTTGTTCGAGAGGATGTATTAAAAAGATGTAACGTTCTCAATCTTAA ATGGTTAGAGCTCCATTTTATGATGAAAATGGAGTTAAAAAAGGTGCATGGAGTGCTGAAGAAGATGAGAAACTCAAAGCTTATGTTCAACAACATGGCCATTGCAATTGGCGAGAGCTCCCTAAATATGCTGGTTTGTTGAGGTGTGGCAAAAGTTGTAGACTGCGTTGGATTAATTACCTTCGTCCGGATGTGAAAAGAGGAAATTACTCCAAAGAAGAAGAACAACTAATCCTCCAATTGCATCAACAACATGGAAACAAATGGTCATTGATATCTTCAAAATTGTCGGGACGAACGGATAACGAAATAAAGAATTATTGGCACACCCATTTAAAGAAGGTAAAAAGTAACAAGGTTACAAAGAAGCAACAAAATGAGGAAAGTTGGAAGCAAAAATCCATTCAAAAAAGAGAAACATTAGAAATGACAAACCAAATTCCTTGTCATCAGATTATAATTGAAAGCTCTCCATTTTCCCCTTTGTCATCTGAAATTTCCACTGTCTGCTCCAATCAAGAATCCACAGAAGATAGCCTTCCAACAACATTCAAGTTTCAAGAACCATATGATAACAATGGAGATTTTTGGGCTAATCCATTTCTAGCAGACAATTTGGAAGCTGAAAGTGAAAACTCAATGAACTTTGATTTTATTGGAGGATTCAATCCACCTTATGATTTGGAGTTTGATGAAAACTACTTATTCCACCAAGTAATGAAAGAATTGCCTGAGAATTATCAACCCCATTTGTATCCCTCCTGA MVRAPFYDENGVKKGAWSAEEDEKLKAYVQQHGHCNWRELPKYAGLLRCGKSCRLRWINYLRPDVKRGNYSKEEEQLILQLHQQHGNKWSLISSKLSGRTDNEIKNYWHTHLKKVKSNKVTKKQQNEESWKQKSIQKRETLEMTNQIPCHQIIIESSPFSPLSSEISTVCSNQESTEDSLPTTFKFQEPYDNNGDFWANPFLADNLEAESENSMNFDFIGGFNPPYDLEFDENYLFHQVMKELPENYQPHLYPS Homology
BLAST of Lsi11G015040 vs. ExPASy Swiss-Prot
Match: Q9SBF3 (Transcription factor MYB92 OS=Arabidopsis thaliana OX=3702 GN=MYB92 PE=1 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.0e-42 Identity = 77/114 (67.54%), Postives = 93/114 (81.58%), Query Frame = 0
BLAST of Lsi11G015040 vs. ExPASy Swiss-Prot
Match: Q6K1S6 (Transcription factor MYB30 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB30 PE=1 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 2.6e-42 Identity = 90/205 (43.90%), Postives = 132/205 (64.39%), Query Frame = 0
BLAST of Lsi11G015040 vs. ExPASy Swiss-Prot
Match: Q6R0A6 (Transcription factor MYB63 OS=Arabidopsis thaliana OX=3702 GN=MYB63 PE=1 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 3.5e-42 Identity = 77/112 (68.75%), Postives = 93/112 (83.04%), Query Frame = 0
BLAST of Lsi11G015040 vs. ExPASy Swiss-Prot
Match: Q7XBH4 (Transcription factor MYB4 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB4 PE=2 SV=2) HSP 1 Score: 172.9 bits (437), Expect = 4.5e-42 Identity = 94/207 (45.41%), Postives = 128/207 (61.84%), Query Frame = 0
BLAST of Lsi11G015040 vs. ExPASy Swiss-Prot
Match: Q9LDR8 (Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 7.7e-42 Identity = 74/114 (64.91%), Postives = 95/114 (83.33%), Query Frame = 0
BLAST of Lsi11G015040 vs. ExPASy TrEMBL
Match: A0A1S3C0B0 (transcription factor WER-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495551 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 6.2e-103 Identity = 208/270 (77.04%), Postives = 224/270 (82.96%), Query Frame = 0
BLAST of Lsi11G015040 vs. ExPASy TrEMBL
Match: A0A6J1GMG4 (transcription factor MYB58-like OS=Cucurbita moschata OX=3662 GN=LOC111455304 PE=4 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 2.7e-98 Identity = 186/258 (72.09%), Postives = 217/258 (84.11%), Query Frame = 0
BLAST of Lsi11G015040 vs. ExPASy TrEMBL
Match: A0A6J1HX88 (transcription factor MYB4-like OS=Cucurbita maxima OX=3661 GN=LOC111468296 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 3.9e-97 Identity = 186/257 (72.37%), Postives = 218/257 (84.82%), Query Frame = 0
BLAST of Lsi11G015040 vs. ExPASy TrEMBL
Match: A0A6J1C3G7 (transcription factor WER-like OS=Momordica charantia OX=3673 GN=LOC111007597 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 3.5e-90 Identity = 185/267 (69.29%), Postives = 211/267 (79.03%), Query Frame = 0
BLAST of Lsi11G015040 vs. ExPASy TrEMBL
Match: A0A1S4E0E6 (myb-related protein Myb4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495551 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 4.3e-64 Identity = 116/128 (90.62%), Postives = 125/128 (97.66%), Query Frame = 0
BLAST of Lsi11G015040 vs. NCBI nr
Match: XP_038888503.1 (transcription factor MYB4-like [Benincasa hispida]) HSP 1 Score: 464.2 bits (1193), Expect = 7.5e-127 Identity = 229/258 (88.76%), Postives = 238/258 (92.25%), Query Frame = 0
BLAST of Lsi11G015040 vs. NCBI nr
Match: XP_008455365.1 (PREDICTED: transcription factor WER-like isoform X2 [Cucumis melo]) HSP 1 Score: 383.6 bits (984), Expect = 1.3e-102 Identity = 208/270 (77.04%), Postives = 224/270 (82.96%), Query Frame = 0
BLAST of Lsi11G015040 vs. NCBI nr
Match: XP_023554593.1 (transcription factor MYB4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 369.0 bits (946), Expect = 3.3e-98 Identity = 186/256 (72.66%), Postives = 217/256 (84.77%), Query Frame = 0
BLAST of Lsi11G015040 vs. NCBI nr
Match: KAG6572331.1 (Transcription factor MYB92, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 368.6 bits (945), Expect = 4.3e-98 Identity = 187/258 (72.48%), Postives = 217/258 (84.11%), Query Frame = 0
BLAST of Lsi11G015040 vs. NCBI nr
Match: XP_022952680.1 (transcription factor MYB58-like [Cucurbita moschata]) HSP 1 Score: 368.2 bits (944), Expect = 5.6e-98 Identity = 186/258 (72.09%), Postives = 217/258 (84.11%), Query Frame = 0
BLAST of Lsi11G015040 vs. TAIR 10
Match: AT5G16770.1 (myb domain protein 9 ) HSP 1 Score: 174.5 bits (441), Expect = 1.1e-43 Identity = 77/114 (67.54%), Postives = 93/114 (81.58%), Query Frame = 0
BLAST of Lsi11G015040 vs. TAIR 10
Match: AT5G16770.2 (myb domain protein 9 ) HSP 1 Score: 174.5 bits (441), Expect = 1.1e-43 Identity = 77/114 (67.54%), Postives = 93/114 (81.58%), Query Frame = 0
BLAST of Lsi11G015040 vs. TAIR 10
Match: AT5G10280.1 (myb domain protein 92 ) HSP 1 Score: 174.1 bits (440), Expect = 1.4e-43 Identity = 77/114 (67.54%), Postives = 93/114 (81.58%), Query Frame = 0
BLAST of Lsi11G015040 vs. TAIR 10
Match: AT1G79180.1 (myb domain protein 63 ) HSP 1 Score: 173.3 bits (438), Expect = 2.5e-43 Identity = 77/112 (68.75%), Postives = 93/112 (83.04%), Query Frame = 0
BLAST of Lsi11G015040 vs. TAIR 10
Match: AT4G21440.1 (MYB-like 102 ) HSP 1 Score: 172.2 bits (435), Expect = 5.5e-43 Identity = 74/114 (64.91%), Postives = 95/114 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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