Lsi11G014650 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G014650
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Translation factor sui1, putative
Location	chr11: 23224759 .. 23226221 (-)
RNA-Seq Expression	Lsi11G014650
Synteny	Lsi11G014650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTGCAGTTTTGAGCAGCTGAATTTGAGAGCCCATAATTCATTTGCTGGTTACCTGTGTTCTACTTCGGACAGCCCAGTTTCATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGGTAGCTTAACAACTCCCTGTTCTTGGTTTTTACTTCTTATTGTGTTGTACTGTATAAGAAGCCTGAATGTTGGTTTTGATATTAATTAATTTCGTTTGATGGTTAGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGAATACAGCAACGCAACGGGAGAAAAAGTTTGACAACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTCTGTTCTCCCACCCTAAATGATTTGTATTTAGGCCCCTTTTTTTGTTGATTCGTCTGACATTAAAACTAAAAGGAGAAAACTAGTTTCTAATTTTGGATAAAGTTGGGATTAGTGTTAGAACAATTGGGGGTGCAAGAATAATGGTAATGCTCTATTTAGGCATTAAAGAGGGAAAATAAAACCAACTCATAGGAAGTTTGCTCTGCCTGTCATTTAGCAGTCAGTTGATTTCTTTCTGCATAAAGCTGCTGACAGGAGTTTTCATTATGGGTTGTGGTTTGGTTTACATATCATGAACAAGAATCTAGATGGTGTTATTGGTATTGTAGGAATGCTTCTATGCATGTGCTTTTCTTTCTTTGTTTCCTTTTCCGGAATATGAAAGCATACCATGCAAATCAATTACATCATTTGCATTGGTTGTCCTGCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGTAATGGTTGACTGTATATAGTTCCTGGCGATAAATATTTATTTGGTAATCACTTTTGATATATGCTCGTCTTTTTCCGCATTGATAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATCCACGGTTTCTAAAGATCATCAAGATTGTGTTTACAGCAGCTTATAACTTATAGTAGTGGACATAATATAACTATCTTTAGAACTTACGAGTACATGCTACAACTCTGGATAGATGTACGTTTGCTTTGCTTTGTTATGCAAACCAAGTTATGGATTGGTGGACCCTTTTAGTTAATAATATGTTTCCTGCTTTCTCATCTCGACCGCAACTTTAGATCTTGACCTCTCATTGACCTGATTTTCGTTGATTTGTTTATAACATGCTCGAAATATAATTATGTGCAGAGCAATGTTCATCCATGAGTCCTGGTTTCTCGTGATCAAATTGTATTCTTAGCATTTTTATTCATTCATGAGACTTCCGCATTCGGTACTCTTCCCCAACTCCTTATTGAGTTGGTTCTCATTTTTCACTAATT

mRNA sequence

ATGTTTTGCAGTTTTGAGCAGCTGAATTTGAGAGCCCATAATTCATTTGCTGGTTACCTGTGTTCTACTTCGGACAGCCCAGTTTCATACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGAATACAGCAACGCAACGGGAGAAAAAGTTTGACAACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGTCAGTTGATTTCTTTCTGCATAAAGCTGCTGACAGGAGTTTTCATTATGGGTTGTGGTTTGGTTTACATATCATGAACAAGAATCTAGATGGTGTTATTGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATCCACGGTTTCTAAAGATCATCAAGATTGTGTTTACAGCAGCTTATAACTTATAGTAGTGGACATAATATAACTATCTTTAGAACTTACGAGTACATGCTACAACTCTGGATAGATGTACGTTTGCTTTGCTTTGTTATGCAAACCAAGTTATGGATTGGTGGACCCTTTTAGTTAATAATATGTTTCCTGCTTTCTCATCTCGACCGCAACTTTAGATCTTGACCTCTCATTGACCTGATTTTCGTTGATTTGTTTATAACATGCTCGAAATATAATTATGTGCAGAGCAATGTTCATCCATGAGTCCTGGTTTCTCGTGATCAAATTGTATTCTTAGCATTTTTATTCATTCATGAGACTTCCGCATTCGGTACTCTTCCCCAACTCCTTATTGAGTTGGTTCTCATTTTTCACTAATT

Coding sequence (CDS)

ATGTTTTGCAGTTTTGAGCAGCTGAATTTGAGAGCCCATAATTCATTTGCTGGTTACCTGTGTTCTACTTCGGACAGCCCAGTTTCATACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGAATACAGCAACGCAACGGGAGAAAAAGTTTGACAACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGTCAGTTGATTTCTTTCTGCATAAAGCTGCTGACAGGAGTTTTCATTATGGGTTGTGGTTTGGTTTACATATCATGAACAAGAATCTAGATGGTGTTATTGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATCCACGGTTTCTAAAGATCATCAAGATTGTGTTTACAGCAGCTTATAACTTATAG

Protein sequence

MFCSFEQLNLRAHNSFAGYLCSTSDSPVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKIVFTAAYNL

Homology

[Close]

BLAST of Lsi11G014650 vs. ExPASy Swiss-Prot
Match: O48650 (Protein translation factor SUI1 homolog OS=Salix bakko OX=72444 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.3e-31
Identity = 62/70 (88.57%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 31  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 90
           PFA+ANAEDSGAG K+YVHVR+QQRNGRKSLTTVQGLKK++SYNKILKDLKKEFCCNGTV
Sbjct: 14  PFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNGTV 73

Query: 91  VQDPELGQSV 101
           VQDPELGQ +
Sbjct: 74  VQDPELGQVI 83

[Close]

BLAST of Lsi11G014650 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-30
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 0


Query: 31  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 90
           PFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGTV
Sbjct: 14  PFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTV 73

Query: 91  VQDPELGQSV 101
           VQD ELGQ +
Sbjct: 74  VQDSELGQVI 83

[Close]

BLAST of Lsi11G014650 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 2.8e-30
Identity = 64/78 (82.05%), Postives = 70/78 (89.74%), Query Frame = 0


Query: 24  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKK 83
           S  P ++ PFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKK
Sbjct: 6   SQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKK 65

Query: 84  EFCCNGTVVQDPELGQSV 101
           EFCCNGTVVQD ELGQ +
Sbjct: 66  EFCCNGTVVQDSELGQVI 83

[Close]

BLAST of Lsi11G014650 vs. ExPASy Swiss-Prot
Match: Q9SQF4 (Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.8e-30
Identity = 64/78 (82.05%), Postives = 70/78 (89.74%), Query Frame = 0


Query: 24  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKK 83
           S  P ++ PFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKK
Sbjct: 6   SQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKK 65

Query: 84  EFCCNGTVVQDPELGQSV 101
           EFCCNGTVVQD ELGQ +
Sbjct: 66  EFCCNGTVVQDSELGQVI 83

[Close]

BLAST of Lsi11G014650 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-29
Identity = 64/72 (88.89%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 31  PFADANAEDSG--AGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNG 90
           PFA+ANA DSG  AG+K+YVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNG
Sbjct: 14  PFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNG 73

Query: 91  TVVQDPELGQSV 101
           TVVQDPELGQ +
Sbjct: 74  TVVQDPELGQVI 85

[Close]

BLAST of Lsi11G014650 vs. ExPASy TrEMBL
Match: A0A5D3C578 (Putative translation factor sui1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004110 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.9e-59
Identity = 128/194 (65.98%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 1   MFCSFEQLNLRAHN------SFAGYLCSTSDSPVSY-----PFADANAEDSGAGAKEYVH 60
           MFCSFEQLNLRAH+       ++G     S+  V       PFADANAEDSGAGAKEYVH
Sbjct: 10  MFCSFEQLNLRAHSFCWLPVFYSGQPSFMSEFNVQIPSAFDPFADANAEDSGAGAKEYVH 69

Query: 61  VRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVD-------F 120
           VRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQ +        F
Sbjct: 70  VRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQDIRTAYMHVLF 129

Query: 121 FLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPR 177
           FL         Y +     + N       GYTTSGRPKKECVY+PCAGW+CEEGK+QD R
Sbjct: 130 FLCSLFWNIQQYAIPINYIVCN---GCPAGYTTSGRPKKECVYIPCAGWYCEEGKHQDSR 189

[Close]

BLAST of Lsi11G014650 vs. ExPASy TrEMBL
Match: A0A445A5S9 (SUI1 domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g067094 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.9e-37
Identity = 89/143 (62.24%), Postives = 98/143 (68.53%), Query Frame = 0


Query: 23  TSDSPVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKK 82
           T+ S    PFA+ANA+DSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSY KILKDLKK
Sbjct: 6   TNISTAFDPFAEANADDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYTKILKDLKK 65

Query: 83  EFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKE 142
           EFCCNGTVVQDPELGQ  DF      +R    G++              G+T SGR KKE
Sbjct: 66  EFCCNGTVVQDPELGQ--DFVNETKENRKMFPGVYVR-----------TGHTASGRSKKE 125

Query: 143 CVYLPCAGWHCEEGKYQDPRFLK 166
               PC   H +EG YQD  FL+
Sbjct: 126 RFNFPCPSGHSKEGAYQDSWFLR 135

[Close]

BLAST of Lsi11G014650 vs. ExPASy TrEMBL
Match: A0A0D2NJY1 (SUI1 domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_002G083300 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 3.0e-35
Identity = 80/126 (63.49%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 31  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 90
           PFADANAEDSGAGAKEYVH+RIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV
Sbjct: 14  PFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 73

Query: 91  VQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAG 150
           V+DPELGQ                                + Y+ S R K+EC +LPC+G
Sbjct: 74  VEDPELGQ--------------------------------VCYSASRRSKEECFHLPCSG 107

Query: 151 WHCEEG 157
            +CEEG
Sbjct: 134 RYCEEG 107

[Close]

BLAST of Lsi11G014650 vs. ExPASy TrEMBL
Match: A0A5B6UGN0 (Translation initiation factor SUI1 OS=Gossypium australe OX=47621 GN=sui1 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.9e-35
Identity = 83/139 (59.71%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 31  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 90
           PFADANAEDSGAGAKEYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV
Sbjct: 44  PFADANAEDSGAGAKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 103

Query: 91  VQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAG 150
           VQDPELGQ +        D+              KN+   +            V     G
Sbjct: 104 VQDPELGQVIQL----QGDQ-------------RKNVSTFL------------VQYETMG 153

Query: 151 WHCEEGKYQDPRFLKIIKI 170
           WHCEEGK+Q+P FL   K+
Sbjct: 164 WHCEEGKHQNPWFLSCSKL 153

[Close]

BLAST of Lsi11G014650 vs. ExPASy TrEMBL
Match: A0A061F6N8 (Translation initiation factor SUI1 family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_031068 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 5.0e-35
Identity = 82/143 (57.34%), Postives = 90/143 (62.94%), Query Frame = 0


Query: 31  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 90
           PFADANAEDSGAGAKEYVH+RIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV
Sbjct: 14  PFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 73

Query: 91  VQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAG 150
           VQDPELGQ +                                    G  +K        G
Sbjct: 74  VQDPELGQVIQL---------------------------------QGDQRKNVSTFLVQG 123

Query: 151 WHCEEGKYQDPRFLKIIKIVFTA 174
           WHCEEG++Q+P FL    + F+A
Sbjct: 134 WHCEEGEHQNPWFLSCSCLKFSA 123

[Close]

BLAST of Lsi11G014650 vs. NCBI nr
Match: KAA0040255.1 (putative translation factor sui1 [Cucumis melo var. makuwa] >TYK07093.1 putative translation factor sui1 [Cucumis melo var. makuwa])

HSP 1 Score: 238.0 bits (606), Expect = 6.1e-59
Identity = 128/194 (65.98%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 1   MFCSFEQLNLRAHN------SFAGYLCSTSDSPVSY-----PFADANAEDSGAGAKEYVH 60
           MFCSFEQLNLRAH+       ++G     S+  V       PFADANAEDSGAGAKEYVH
Sbjct: 10  MFCSFEQLNLRAHSFCWLPVFYSGQPSFMSEFNVQIPSAFDPFADANAEDSGAGAKEYVH 69

Query: 61  VRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVD-------F 120
           VRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQ +        F
Sbjct: 70  VRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQDIRTAYMHVLF 129

Query: 121 FLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPR 177
           FL         Y +     + N       GYTTSGRPKKECVY+PCAGW+CEEGK+QD R
Sbjct: 130 FLCSLFWNIQQYAIPINYIVCN---GCPAGYTTSGRPKKECVYIPCAGWYCEEGKHQDSR 189

[Close]

BLAST of Lsi11G014650 vs. NCBI nr
Match: KAF7805814.1 (protein translation factor SUI1-like protein [Senna tora])

HSP 1 Score: 167.9 bits (424), Expect = 7.7e-38
Identity = 85/140 (60.71%), Postives = 97/140 (69.29%), Query Frame = 0


Query: 27  PVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 86
           P +Y PFA+ANAEDS AG K+YVHVR+QQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFC
Sbjct: 9   PTTYDPFAEANAEDSDAGTKDYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFC 68

Query: 87  CNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVY 146
           CNGTVV+DPELGQ                               V+ +TTSGR KKE  +
Sbjct: 69  CNGTVVEDPELGQVC--------------------------TSCVLSHTTSGRSKKERFH 122

Query: 147 LPCAGWHCEEGKYQDPRFLK 166
           +PCAGWH EEG YQD  FL+
Sbjct: 129 IPCAGWHSEEGAYQDSWFLR 122

[Close]

BLAST of Lsi11G014650 vs. NCBI nr
Match: RYR21776.1 (hypothetical protein Ahy_B03g067094 [Arachis hypogaea])

HSP 1 Score: 165.6 bits (418), Expect = 3.8e-37
Identity = 89/143 (62.24%), Postives = 98/143 (68.53%), Query Frame = 0


Query: 23  TSDSPVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKK 82
           T+ S    PFA+ANA+DSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSY KILKDLKK
Sbjct: 6   TNISTAFDPFAEANADDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYTKILKDLKK 65

Query: 83  EFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKE 142
           EFCCNGTVVQDPELGQ  DF      +R    G++              G+T SGR KKE
Sbjct: 66  EFCCNGTVVQDPELGQ--DFVNETKENRKMFPGVYVR-----------TGHTASGRSKKE 125

Query: 143 CVYLPCAGWHCEEGKYQDPRFLK 166
               PC   H +EG YQD  FL+
Sbjct: 126 RFNFPCPSGHSKEGAYQDSWFLR 135

[Close]

BLAST of Lsi11G014650 vs. NCBI nr
Match: KAG8479362.1 (hypothetical protein CXB51_029902 [Gossypium anomalum])

HSP 1 Score: 161.4 bits (407), Expect = 7.2e-36
Identity = 86/143 (60.14%), Postives = 96/143 (67.13%), Query Frame = 0


Query: 31  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 90
           PFADANAEDSGAGAKEYVH+RIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV
Sbjct: 14  PFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 73

Query: 91  VQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAG 150
           VQDPELGQ +        D+              KN+   +            V +   G
Sbjct: 74  VQDPELGQVIQL----QGDQ-------------RKNVSTFL------------VQVIVGG 127

Query: 151 WHCEEGKYQDPRFLKIIKIVFTA 174
           WHCEEGK+Q+P FL  I + F+A
Sbjct: 134 WHCEEGKHQNPWFLNCICLWFSA 127

[Close]

BLAST of Lsi11G014650 vs. NCBI nr
Match: KJB13598.1 (hypothetical protein B456_002G083300 [Gossypium raimondii])

HSP 1 Score: 158.3 bits (399), Expect = 6.1e-35
Identity = 80/126 (63.49%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 31  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 90
           PFADANAEDSGAGAKEYVH+RIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV
Sbjct: 14  PFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 73

Query: 91  VQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAG 150
           V+DPELGQ                                + Y+ S R K+EC +LPC+G
Sbjct: 74  VEDPELGQ--------------------------------VCYSASRRSKEECFHLPCSG 107

Query: 151 WHCEEG 157
            +CEEG
Sbjct: 134 RYCEEG 107

[Close]

BLAST of Lsi11G014650 vs. TAIR 10
Match: AT1G54290.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-31
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 0


Query: 31  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV 90
           PFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGTV
Sbjct: 14  PFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTV 73

Query: 91  VQDPELGQSV 101
           VQD ELGQ +
Sbjct: 74  VQDSELGQVI 83

[Close]

BLAST of Lsi11G014650 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-31
Identity = 64/78 (82.05%), Postives = 70/78 (89.74%), Query Frame = 0


Query: 24  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKK 83
           S  P ++ PFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKK
Sbjct: 6   SQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKK 65

Query: 84  EFCCNGTVVQDPELGQSV 101
           EFCCNGTVVQD ELGQ +
Sbjct: 66  EFCCNGTVVQDSELGQVI 83

[Close]

BLAST of Lsi11G014650 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 131.7 bits (330), Expect = 5.7e-31
Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 24  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKK 83
           S  P ++ PFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKK
Sbjct: 6   SQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKK 65

Query: 84  EFCCNGTVVQDPELGQSV 101
           EFCCNGTVVQD ELGQ +
Sbjct: 66  EFCCNGTVVQDSELGQVI 83

[Close]

BLAST of Lsi11G014650 vs. TAIR 10
Match: AT5G54760.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 131.7 bits (330), Expect = 5.7e-31
Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 24  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKK 83
           S  P ++ PFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKK
Sbjct: 6   SQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKK 65

Query: 84  EFCCNGTVVQDPELGQSV 101
           EFCCNGTVVQD ELGQ +
Sbjct: 66  EFCCNGTVVQDSELGQVI 83

[Close]

BLAST of Lsi11G014650 vs. TAIR 10
Match: AT5G54760.3 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 131.7 bits (330), Expect = 5.7e-31
Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 24  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKK 83
           S  P ++ PFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKK
Sbjct: 6   SQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKK 65

Query: 84  EFCCNGTVVQDPELGQSV 101
           EFCCNGTVVQD ELGQ +
Sbjct: 66  EFCCNGTVVQDSELGQVI 83

The following BLAST results are available for this feature:

BLAST of Lsi11G014650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48650	7.3e-31	88.57	Protein translation factor SUI1 homolog OS=Salix bakko OX=72444 PE=3 SV=1	[more]
Q94JV4	2.1e-30	88.57	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P41568	2.8e-30	82.05	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
Q9SQF4	2.8e-30	82.05	Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1	[more]
A6MZM2	1.8e-29	88.89	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]

BLAST of Lsi11G014650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C578	2.9e-59	65.98	Putative translation factor sui1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A445A5S9	1.9e-37	62.24	SUI1 domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g067094 PE=...	[more]
A0A0D2NJY1	3.0e-35	63.49	SUI1 domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_002G08330...	[more]
A0A5B6UGN0	3.9e-35	59.71	Translation initiation factor SUI1 OS=Gossypium australe OX=47621 GN=sui1 PE=3 S...	[more]
A0A061F6N8	5.0e-35	57.34	Translation initiation factor SUI1 family protein, putative OS=Theobroma cacao O...	[more]

BLAST of Lsi11G014650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040255.1	6.1e-59	65.98	putative translation factor sui1 [Cucumis melo var. makuwa] >TYK07093.1 putative...	[more]
KAF7805814.1	7.7e-38	60.71	protein translation factor SUI1-like protein [Senna tora]	[more]
RYR21776.1	3.8e-37	62.24	hypothetical protein Ahy_B03g067094 [Arachis hypogaea]	[more]
KAG8479362.1	7.2e-36	60.14	hypothetical protein CXB51_029902 [Gossypium anomalum]	[more]
KJB13598.1	6.1e-35	63.49	hypothetical protein B456_002G083300 [Gossypium raimondii]	[more]

BLAST of Lsi11G014650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54290.1	1.5e-31	88.57	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	2.0e-31	82.05	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	5.7e-31	80.77	Translation initiation factor SUI1 family protein	[more]
AT5G54760.2	5.7e-31	80.77	Translation initiation factor SUI1 family protein	[more]
AT5G54760.3	5.7e-31	80.77	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.780.10		coord: 16..102 e-value: 3.1E-27 score: 97.3
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 29..107
None	No IPR available	PANTHER	PTHR10388:SF64	BNAA09G12640D PROTEIN	coord: 29..107
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 45..95 e-value: 3.6E-16 score: 59.4
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 48..102 score: 16.733442
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 46..100 e-value: 7.6482E-32 score: 108.006
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 32..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G014650.1	Lsi11G014650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0003743	translation initiation factor activity