Lsi11G014620 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G014620
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	sigma intracellular receptor 2-like
Location	chr11: 23188142 .. 23190396 (+)
RNA-Seq Expression	Lsi11G014620
Synteny	Lsi11G014620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTACTAACAATTGTTGGCATTGGCCAACTGTTGGTATTAAAAAAAATTATCAGCTATAAGAACAGCCTTGAAAATTCAACATCCCAATCCAAGAATCAAGATCCCCATCTCATCCAACAAATTATCAATCACTCTTCTCGCAGACATTGTGAGAAGAAAGCTCCGTGGAAAACATGGGCGCTCTTCTTAAGCTCGTCGACGCCCTACTATTCCTCGTCTTCCTCCTACTTGCATTCGTATCTCCTCTAATCGATTTCCAGGTTATTTTCCCTCAAACCCTTTTCCCTGATTTTCTCATCGATATTAAGACCTCCTACATCCGCCAATTCGGGGACTATTTAATGGCAGAATCCCCTCCCTTCATCGTTGGTCTCGTTTGGCTTGAGCTTCTCTTTCAATGGCCACTTATGCTTCTCAGTCTCTACGCCTTCTTGGCTTCCAAGCCATGGTACAACACCACTTGCTTGATCTATGGAGTATCTGTTGTGGCTTCCATGGTAATTCTCTATTCCACCTCCTTCCAATTTGATGGCTAATCTGATCTATTGTTTCATTGAATCAATACATTTTTGCCTGAATATTGTGTTTCTGTTAATTGCATAATGCCTCTGTTGTGTGTTTAATTTTGTAATTGGTACAAAGAATGCCATTTCTTTGTGTTATGTAGTTCGGTGGTGTTGGATTCAGGATGTAGCCACTTGATAGCAGTTGTAGGTACTTAGGTAGTGATTTGAGACAGCTTTGTATCATAGTTTATAAATGGTATTTTGAGTTACTGAGGTTTTAAGATTGTGTATATTTAGTTTTTGTGCTTTACAACGTTTATAATACATACTTGAATTTTGTGTCTAATAGTGTTAAAGATATAATATTAAATTTACCTTCACTCCTCAGCTTAAGTTTTTAAGTCAATCGGTGATTTAACATAGTATCAGAACATGTGGTCTAGGAGGTCTTGTATCTCTCTTGTAATGTTATTATTTCCTCCTCAATTAATATTAATTTTCACTTGTTGAGTCTTCTACATATTTCAAACTCACAGATGAGAGAAAGTGTTAGATGATACAATATTAAATTTATCGCCACCCATCAACTTAAGTTTTTGGGTCAATTGGTGATTTAACCAATAGATACATGTTTTAATTTGTGAGTATCTTACTGGACCGGTTTAAGAATTTAGTGGCACAGATGATAAATTGATGGACTTGATACCAAGACCATTTTTTAGCCTTACAATTCTGAGACAAAACTAATAATTTAACCTTTTCTTTTCTTAAGAAAAGAATAGACTTTGTTTCCTCAGCTAATTTCCTTGTTGTTTTTCAGCATTTTAATAAAACTATTCAATTCATTTCTTGATTCTCCATGATGATGTTGAATGGTAGTTATAGTTAGTGATTTAAGACTGTTTGTATGATAATACATCTCATAAGATAGTTCTAAACTAGACTAGAAACTGATATATTGTCAATAAACTAAGGTTTTCAACTTTTAGGCAATCAGGCACTTTAGATTAGTAATGCATTTGGGATAGCGTTTGAACATCTTTTGAGTTTACTTAGATATTTTAAACACTTTGATATTATGCTTGAATACATGTTGCTAAGGATTTCTTACTGCTTCATTTGTTAACCTAGTTGTAGAGATCCACTGGTTTCTGTTACATTTCTTTTACAGAAATGTTACTTATACTCTGTTTCTTCTGACATTACATTATTTGGCTGTGTAATTTCAAGTCTGCTATAATGGGTGAAATGGTTGGGTCGAACCGAGCATCTACTACTCTGAAGACAATATACTACCCCTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTAGTACCGTGCTCGAGAAAGGCTACAATCACCGGCACCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGAACAGCCATCCTAAATCGCCAAAGGAGTGCCTGTCTTGCCTTTTCTGCAGCCGATTCGGTTAGTATTAACTGAGGATGTTGGTTCCTTTAGGTATTGGCTCAACTCTTGCTATGGATCATTCAGCATTTCCATTAGTCTTTCACTGTATGAGTGGTAATGGTTCAGAGGGACCCTTTTGAATTTTGAATGAGAATAAAGCCAATGAGCTTAAGATTTGAGAATGTTGATGAAAGCTGACCAAAATTCTTGTCTGGATTGAAATATTTGTTGATTTTAAAGTTATGTTAAACCAAATCAAACTACAACTTTTTTCTTTTTAATATAGCAAGTATAGTTATAA

mRNA sequence

ATTTACTAACAATTGTTGGCATTGGCCAACTGTTGGTATTAAAAAAAATTATCAGCTATAAGAACAGCCTTGAAAATTCAACATCCCAATCCAAGAATCAAGATCCCCATCTCATCCAACAAATTATCAATCACTCTTCTCGCAGACATTGTGAGAAGAAAGCTCCGTGGAAAACATGGGCGCTCTTCTTAAGCTCGTCGACGCCCTACTATTCCTCGTCTTCCTCCTACTTGCATTCGTATCTCCTCTAATCGATTTCCAGGTTATTTTCCCTCAAACCCTTTTCCCTGATTTTCTCATCGATATTAAGACCTCCTACATCCGCCAATTCGGGGACTATTTAATGGCAGAATCCCCTCCCTTCATCGTTGGTCTCGTTTGGCTTGAGCTTCTCTTTCAATGGCCACTTATGCTTCTCAGTCTCTACGCCTTCTTGGCTTCCAAGCCATGGTACAACACCACTTGCTTGATCTATGGAGTATCTGTTGTGGCTTCCATGTCTGCTATAATGGGTGAAATGGTTGGGTCGAACCGAGCATCTACTACTCTGAAGACAATATACTACCCCTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTAGTACCGTGCTCGAGAAAGGCTACAATCACCGGCACCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGAACAGCCATCCTAAATCGCCAAAGGAGTGCCTGTCTTGCCTTTTCTGCAGCCGATTCGGTTAGTATTAACTGAGGATGTTGGTTCCTTTAGGTATTGGCTCAACTCTTGCTATGGATCATTCAGCATTTCCATTAGTCTTTCACTGTATGAGTGGTAATGGTTCAGAGGGACCCTTTTGAATTTTGAATGAGAATAAAGCCAATGAGCTTAAGATTTGAGAATGTTGATGAAAGCTGACCAAAATTCTTGTCTGGATTGAAATATTTGTTGATTTTAAAGTTATGTTAAACCAAATCAAACTACAACTTTTTTCTTTTTAATATAGCAAGTATAGTTATAA

Coding sequence (CDS)

ATGGGCGCTCTTCTTAAGCTCGTCGACGCCCTACTATTCCTCGTCTTCCTCCTACTTGCATTCGTATCTCCTCTAATCGATTTCCAGGTTATTTTCCCTCAAACCCTTTTCCCTGATTTTCTCATCGATATTAAGACCTCCTACATCCGCCAATTCGGGGACTATTTAATGGCAGAATCCCCTCCCTTCATCGTTGGTCTCGTTTGGCTTGAGCTTCTCTTTCAATGGCCACTTATGCTTCTCAGTCTCTACGCCTTCTTGGCTTCCAAGCCATGGTACAACACCACTTGCTTGATCTATGGAGTATCTGTTGTGGCTTCCATGTCTGCTATAATGGGTGAAATGGTTGGGTCGAACCGAGCATCTACTACTCTGAAGACAATATACTACCCCTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTAGTACCGTGCTCGAGAAAGGCTACAATCACCGGCACCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGA

Protein sequence

MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAESPPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLATLRGLVPCSRKATITGTRPSNGRKKRA

Homology

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BLAST of Lsi11G014620 vs. ExPASy Swiss-Prot
Match: Q6DFQ5 (Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-07
Identity = 42/154 (27.27%), Postives = 72/154 (46.75%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           M    +L++ + F  F     ++ L+D Q + P +L+P  L+D+   Y   F D+LMA  
Sbjct: 1   MAVCARLLEWIFFFYFFSHIPITLLVDLQAVLPPSLYPQELLDLMKWYTVAFKDHLMANP 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFL-ASKPWYNTTCLIYGVSVVASMSAIMGEMVG-- 120
           PP+    V+ E + Q P   ++ YAF      W     ++Y   V  ++ AI+G ++   
Sbjct: 61  PPWFKSFVYCEAILQLPFFPVAAYAFFKGGCKWIRIPAIVYSAHVATTVIAIIGHILFGE 120

Query: 121 ----------SNRASTTLKTIYYPFLGLGVLATL 142
                     + +   TL +IY P+L + VL  L
Sbjct: 121 FPKSDVIAPLTQKDRLTLVSIYAPYLLVPVLLLL 154

[Close]

BLAST of Lsi11G014620 vs. ExPASy TrEMBL
Match: A0A0A0K5K2 (EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.6e-73
Identity = 143/166 (86.14%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGA LKL+D LLFL+FL+LA +SPLIDFQ+IFP TLFPDFLID+KTSY RQ+GDYLMAES
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           PPF+VGLVWLEL FQWP+MLL+LYAFLASKPWYNTTCLIYGVSVV+SMSA++GEMVGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKATITGTRPSNGRKKRA 167
           ASTTL TIYYPFLGLGVLA LRGLVPCS KA ITGTRPSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITGTRPSNGRKKRA 166

[Close]

BLAST of Lsi11G014620 vs. ExPASy TrEMBL
Match: A0A6J1HVX1 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468330 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.3e-71
Identity = 145/166 (87.35%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGALLKLVDALLFL FLLLA VSPLIDFQVIFPQTLFP FLID+KT YIRQ GDY+MA+S
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPQTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F+V LVWLELLFQWPL+LL+LYAFLA+KPWYNTTCLIYGVS+VASMSAI+GEMVGSNR
Sbjct: 61  PHFVVALVWLELLFQWPLLLLNLYAFLAAKPWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKATITGTRPSNGRKKRA 167
           AS TL TIYYPFLGLGVLA LRGLV CS KATITGTRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of Lsi11G014620 vs. ExPASy TrEMBL
Match: A0A5D3C9W7 (Transmembrane protein 97-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004140 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.7e-70
Identity = 139/167 (83.23%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGA LKL+DALLFL+FL+LA +SP IDFQ+IFPQTLFPDFLID+K SY+RQ+GDY+MAES
Sbjct: 1   MGAFLKLIDALLFLIFLILAIISPPIDFQLIFPQTLFPDFLIDLKASYVRQYGDYIMAES 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           PPF+VGLVWLEL FQWPLMLL+LYAFLASKPWY TTCLIYGVSVV SMSA++GEMVGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPLMLLNLYAFLASKPWYKTTCLIYGVSVVTSMSAVLGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKATITG-TRPSNGRKKRA 167
           ASTTL  +YYPF+GLGVLA LRGLVPCS KA ITG TRPSNGRKKRA
Sbjct: 121 ASTTLLAMYYPFMGLGVLAMLRGLVPCSSKAAITGTTRPSNGRKKRA 167

[Close]

BLAST of Lsi11G014620 vs. ExPASy TrEMBL
Match: A0A6J1GM86 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455258 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.7e-70
Identity = 144/166 (86.75%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGALLKLVDALLFL FLLLA VSPLIDFQVIFP+TLFP FLID+KT YIRQ GDY+MA+S
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F+VGLVWLELLFQWPL+LL+LYAFLA+K WYNTTCLIYGVS+VASMSAI+GEMVGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYAFLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKATITGTRPSNGRKKRA 167
           AS TL TIYYPFLGLGVLA LRGLV CS KATITGTRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of Lsi11G014620 vs. ExPASy TrEMBL
Match: A0A6J1JIQ0 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486176 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62
Identity = 126/166 (75.90%), Postives = 146/166 (87.95%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGALLKLVDALLFL FLLLA V PLIDFQ +FP++ +PDF+ID+K+ Y+ Q GDYLM E+
Sbjct: 1   MGALLKLVDALLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKSWYVAQSGDYLMVEA 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F+VGL+W ELLFQWPL+ L+LYAFL+SK W+NTTCLIYGVS+V+SMSA MGE+VGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWFNTTCLIYGVSLVSSMSATMGEVVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKATITGTRPSNGRKKRA 167
           AS TL TIY+PF+GLGVLA LRGLVPCS KATI G RPSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLAMLRGLVPCSSKATINGPRPSNGRKKRA 166

[Close]

BLAST of Lsi11G014620 vs. NCBI nr
Match: XP_038887415.1 (sigma intracellular receptor 2 [Benincasa hispida])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 151/166 (90.96%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGALLKLVDALLFLVFLLLAF+SPLIDFQ+IFPQTLFPDFLID+K SYI Q+GDYLMAES
Sbjct: 1   MGALLKLVDALLFLVFLLLAFISPLIDFQLIFPQTLFPDFLIDLKASYIHQYGDYLMAES 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           PPF+VGLVWLELLFQWPLMLL+LYAFLASKPWYNTTCLIYGVSVVASMSAI+GEMVGSNR
Sbjct: 61  PPFVVGLVWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAILGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKATITGTRPSNGRKKRA 167
           ASTTL TIYYPFLG GVLA LRGLV CS KAT+TGTRPSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGFGVLAMLRGLVSCSSKATVTGTRPSNGRKKRA 166

[Close]

BLAST of Lsi11G014620 vs. NCBI nr
Match: XP_004144492.1 (sigma intracellular receptor 2 [Cucumis sativus] >KGN43532.1 hypothetical protein Csa_020333 [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 5.3e-73
Identity = 143/166 (86.14%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGA LKL+D LLFL+FL+LA +SPLIDFQ+IFP TLFPDFLID+KTSY RQ+GDYLMAES
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           PPF+VGLVWLEL FQWP+MLL+LYAFLASKPWYNTTCLIYGVSVV+SMSA++GEMVGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKATITGTRPSNGRKKRA 167
           ASTTL TIYYPFLGLGVLA LRGLVPCS KA ITGTRPSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITGTRPSNGRKKRA 166

[Close]

BLAST of Lsi11G014620 vs. NCBI nr
Match: XP_022969277.1 (sigma intracellular receptor 2-like [Cucurbita maxima])

HSP 1 Score: 276.9 bits (707), Expect = 1.1e-70
Identity = 145/166 (87.35%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGALLKLVDALLFL FLLLA VSPLIDFQVIFPQTLFP FLID+KT YIRQ GDY+MA+S
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPQTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F+V LVWLELLFQWPL+LL+LYAFLA+KPWYNTTCLIYGVS+VASMSAI+GEMVGSNR
Sbjct: 61  PHFVVALVWLELLFQWPLLLLNLYAFLAAKPWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKATITGTRPSNGRKKRA 167
           AS TL TIYYPFLGLGVLA LRGLV CS KATITGTRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of Lsi11G014620 vs. NCBI nr
Match: KAA0040253.1 (transmembrane protein 97-like [Cucumis melo var. makuwa] >TYK07096.1 transmembrane protein 97-like [Cucumis melo var. makuwa])

HSP 1 Score: 274.6 bits (701), Expect = 5.5e-70
Identity = 139/167 (83.23%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGA LKL+DALLFL+FL+LA +SP IDFQ+IFPQTLFPDFLID+K SY+RQ+GDY+MAES
Sbjct: 1   MGAFLKLIDALLFLIFLILAIISPPIDFQLIFPQTLFPDFLIDLKASYVRQYGDYIMAES 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           PPF+VGLVWLEL FQWPLMLL+LYAFLASKPWY TTCLIYGVSVV SMSA++GEMVGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPLMLLNLYAFLASKPWYKTTCLIYGVSVVTSMSAVLGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKATITG-TRPSNGRKKRA 167
           ASTTL  +YYPF+GLGVLA LRGLVPCS KA ITG TRPSNGRKKRA
Sbjct: 121 ASTTLLAMYYPFMGLGVLAMLRGLVPCSSKAAITGTTRPSNGRKKRA 167

[Close]

BLAST of Lsi11G014620 vs. NCBI nr
Match: XP_022952624.1 (sigma intracellular receptor 2-like [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 5.5e-70
Identity = 144/166 (86.75%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGALLKLVDALLFL FLLLA VSPLIDFQVIFP+TLFP FLID+KT YIRQ GDY+MA+S
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F+VGLVWLELLFQWPL+LL+LYAFLA+K WYNTTCLIYGVS+VASMSAI+GEMVGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYAFLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKATITGTRPSNGRKKRA 167
           AS TL TIYYPFLGLGVLA LRGLV CS KATITGTRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of Lsi11G014620 vs. TAIR 10
Match: AT1G05210.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 166.0 bits (419), Expect = 2.6e-41
Identity = 84/152 (55.26%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGAL KL+D  LF+ F+ +A ++PLID Q   P  ++P FL D+K+ YI  FGDYL+ E 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F+VGLVW ELLF WPL + ++YA LA K W+ TTCL+YG S+V SM+AI+G+M+GS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKAT 153
           AS  L  +Y PF+G G+LA LRGLV  S K T
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTKNT 152

[Close]

BLAST of Lsi11G014620 vs. TAIR 10
Match: AT2G32380.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 165.6 bits (418), Expect = 3.3e-41
Identity = 89/168 (52.98%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGA  KL+DA+LFL F L+A ++PLID Q   P  +FP F++D+   YI +FGDYL+ E 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F+VGLVW ELL  WPL ++++YA LA K W+ TT ++YG SVV SM+AI+GEM+GS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRKA-TITGTRPS-NGRKKRA 167
           AS  L  +Y PF+G+G+LA LRGL+  S K+    G RP+   R+KRA
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLLSQSNKSGGAVGKRPAILARRKRA 168

[Close]

BLAST of Lsi11G014620 vs. TAIR 10
Match: AT1G05220.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 137.5 bits (345), Expect = 9.7e-33
Identity = 73/150 (48.67%), Postives = 101/150 (67.33%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGAL KL++  LF  F L+A   PL++ Q++FP  ++P  L D+K  Y  +F DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F VGLVW E++F  PL ++++YA L SK W+ TT L+YG S + SM+AI+G+M+GS +
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRK 151
            +  L   Y PF+GL +LA LRGLV CS K
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTK 149

[Close]

BLAST of Lsi11G014620 vs. TAIR 10
Match: AT1G05220.2 (Transmembrane protein 97, predicted )

HSP 1 Score: 137.5 bits (345), Expect = 9.7e-33
Identity = 73/150 (48.67%), Postives = 101/150 (67.33%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFVSPLIDFQVIFPQTLFPDFLIDIKTSYIRQFGDYLMAES 60
           MGAL KL++  LF  F L+A   PL++ Q++FP  ++P  L D+K  Y  +F DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PPFIVGLVWLELLFQWPLMLLSLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F VGLVW E++F  PL ++++YA L SK W+ TT L+YG S + SM+AI+G+M+GS +
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASTTLKTIYYPFLGLGVLATLRGLVPCSRK 151
            +  L   Y PF+GL +LA LRGLV CS K
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTK 149

The following BLAST results are available for this feature:

BLAST of Lsi11G014620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DFQ5	3.1e-07	27.27	Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1	[more]

BLAST of Lsi11G014620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5K2	2.6e-73	86.14	EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4...	[more]
A0A6J1HVX1	5.3e-71	87.35	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468330 ...	[more]
A0A5D3C9W7	2.7e-70	83.23	Transmembrane protein 97-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1GM86	2.7e-70	86.75	sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC11145525...	[more]
A0A6J1JIQ0	1.6e-62	75.90	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486176 ...	[more]

BLAST of Lsi11G014620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887415.1	1.1e-75	90.96	sigma intracellular receptor 2 [Benincasa hispida]	[more]
XP_004144492.1	5.3e-73	86.14	sigma intracellular receptor 2 [Cucumis sativus] >KGN43532.1 hypothetical protei...	[more]
XP_022969277.1	1.1e-70	87.35	sigma intracellular receptor 2-like [Cucurbita maxima]	[more]
KAA0040253.1	5.5e-70	83.23	transmembrane protein 97-like [Cucumis melo var. makuwa] >TYK07096.1 transmembra...	[more]
XP_022952624.1	5.5e-70	86.75	sigma intracellular receptor 2-like [Cucurbita moschata]	[more]

BLAST of Lsi11G014620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05210.1	2.6e-41	55.26	Transmembrane protein 97, predicted	[more]
AT2G32380.1	3.3e-41	52.98	Transmembrane protein 97, predicted	[more]
AT1G05220.1	9.7e-33	48.67	Transmembrane protein 97, predicted	[more]
AT1G05220.2	9.7e-33	48.67	Transmembrane protein 97, predicted	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05241	EBP	coord: 41..125 e-value: 3.6E-15 score: 56.3
None	No IPR available	PANTHER	PTHR31204:SF6	SUBFAMILY NOT NAMED	coord: 1..166
None	No IPR available	PANTHER	PTHR31204	SIGMA INTRACELLULAR RECEPTOR 2	coord: 1..166
IPR016964	Sigma intracellular receptor 2	PIRSF	PIRSF031032	TMP_97	coord: 1..157 e-value: 3.3E-29 score: 99.6
IPR033118	EXPERA domain	PROSITE	PS51751	EXPERA	coord: 8..140 score: 15.682153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G014620.1	Lsi11G014620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane