Lsi11G013850 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G013850
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Calcium-binding EF-hand family protein
Location	chr11: 22414773 .. 22415186 (-)
RNA-Seq Expression	Lsi11G013850
Synteny	Lsi11G013850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGTAGAATTACTTGACGGCACCACCATAGTCAACTTCGTGGAAGACGAAGAAGCTTTCAATGGTTGGATTAGAGAGCATTTCACTCGCCTCGACACCGACGGCGACGGCTTCCTCTCCTACGCTGAGATGTTGAAGGAGTTGCATACGCTAAGAGTCTCCGAAGCCGACTTTGGAATCGATGTAAAACCCGACACCGATGAGCTCTCTCGTATCTACGGTGCCGTCTTTGGGCAGTTCGATCGCGACTCGAATGGAAAAGTTGATGTGGATGAGTTCATGATGGGGATGAAGAATATGATGCTTGCTATTGCTGAGGGAATGGGATTCTTGCCTATTCAAATGGCCTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTTCAGAGAGAAGCTGCCAAAGCCTTTGCTTGA

mRNA sequence

ATGAGCGTAGAATTACTTGACGGCACCACCATAGTCAACTTCGTGGAAGACGAAGAAGCTTTCAATGGTTGGATTAGAGAGCATTTCACTCGCCTCGACACCGACGGCGACGGCTTCCTCTCCTACGCTGAGATGTTGAAGGAGTTGCATACGCTAAGAGTCTCCGAAGCCGACTTTGGAATCGATGTAAAACCCGACACCGATGAGCTCTCTCGTATCTACGGTGCCGTCTTTGGGCAGTTCGATCGCGACTCGAATGGAAAAGTTGATGTGGATGAGTTCATGATGGGGATGAAGAATATGATGCTTGCTATTGCTGAGGGAATGGGATTCTTGCCTATTCAAATGGCCTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTTCAGAGAGAAGCTGCCAAAGCCTTTGCTTGA

Coding sequence (CDS)

ATGAGCGTAGAATTACTTGACGGCACCACCATAGTCAACTTCGTGGAAGACGAAGAAGCTTTCAATGGTTGGATTAGAGAGCATTTCACTCGCCTCGACACCGACGGCGACGGCTTCCTCTCCTACGCTGAGATGTTGAAGGAGTTGCATACGCTAAGAGTCTCCGAAGCCGACTTTGGAATCGATGTAAAACCCGACACCGATGAGCTCTCTCGTATCTACGGTGCCGTCTTTGGGCAGTTCGATCGCGACTCGAATGGAAAAGTTGATGTGGATGAGTTCATGATGGGGATGAAGAATATGATGCTTGCTATTGCTGAGGGAATGGGATTCTTGCCTATTCAAATGGCCTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTTCAGAGAGAAGCTGCCAAAGCCTTTGCTTGA

Protein sequence

MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

Homology

[Close]

BLAST of Lsi11G013850 vs. ExPASy TrEMBL
Match: A0A5A7UY59 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00080 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.9e-62
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 60
           MSVELLDG TIVNFVEDEEAFNGW REHFTRLDTD DGFLSYAEMLKE +TLRVSEADFG
Sbjct: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKEFYTLRVSEADFG 60

Query: 61  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            DVK D DELS++YGAVF QFDRDS+GKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK
Sbjct: 61  TDVKLDADELSQLYGAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120

Query: 121 DGFLMKAVQREAAKAFA 138
           DGFLMKAVQREA KAF+
Sbjct: 121 DGFLMKAVQREATKAFS 137

[Close]

BLAST of Lsi11G013850 vs. ExPASy TrEMBL
Match: A0A1S3C0M6 (uncharacterized protein LOC103495656 OS=Cucumis melo OX=3656 GN=LOC103495656 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.9e-62
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 60
           MSVELLDG TIVNFVEDEEAFNGW REHFTRLDTD DGFLSYAEMLKE +TLRVSEADFG
Sbjct: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKEFYTLRVSEADFG 60

Query: 61  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            DVK D DELS++YGAVF QFDRDS+GKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK
Sbjct: 61  TDVKLDADELSQLYGAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120

Query: 121 DGFLMKAVQREAAKAFA 138
           DGFLMKAVQREA KAF+
Sbjct: 121 DGFLMKAVQREATKAFS 137

[Close]

BLAST of Lsi11G013850 vs. ExPASy TrEMBL
Match: A0A6J1C2T1 (uncharacterized protein LOC111007741 OS=Momordica charantia OX=3673 GN=LOC111007741 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.1e-48
Identity = 96/134 (71.64%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 60
           MSVE+LD  TI+NFVEDEEAF  WIRE F  LD D DG LSYAEML+ELH+LRV E  FG
Sbjct: 1   MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFG 60

Query: 61  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
           +D KPD DELSR+YGAVF QFDR+SNG+VD++EFM G K +M+AIAEGMGFLP+QMALE+
Sbjct: 61  VDAKPDPDELSRLYGAVFMQFDRNSNGEVDLEEFMAGTKRIMVAIAEGMGFLPLQMALEE 120

Query: 121 DGFLMKAVQREAAK 135
           DGFLMKAV+ E ++
Sbjct: 121 DGFLMKAVRSEKSR 134

[Close]

BLAST of Lsi11G013850 vs. ExPASy TrEMBL
Match: A0A5J5A3Z9 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_011209 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.5e-44
Identity = 93/137 (67.88%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 1   MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 60
           MSVE+LD TTIV+FVEDEEAFNG I + F RLDTD DGFLSYAE+LKEL +LRV E  FG
Sbjct: 12  MSVEVLDSTTIVSFVEDEEAFNGSIHDRFARLDTDRDGFLSYAELLKELQSLRVFETHFG 71

Query: 61  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
           IDVK + DEL+R+YG++F QFD DSNG VD++EF    K MMLA+A G+G LP+QMALE+
Sbjct: 72  IDVKTEPDELARVYGSLFVQFDHDSNGAVDLEEFKAETKQMMLAMANGLGCLPVQMALEE 131

Query: 121 DGFLMKAVQREAAKAFA 138
           D FL KAV+RE+AK  A
Sbjct: 132 DSFLKKAVERESAKVLA 148

[Close]

BLAST of Lsi11G013850 vs. ExPASy TrEMBL
Match: A0A5J5A5Q8 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_011204 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.3e-43
Identity = 92/137 (67.15%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 1   MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 60
           MSVE+LD TTIV+FVEDEEAFNG I + F RLDTD DGFLSYAE+LKEL +LRV E  FG
Sbjct: 12  MSVEVLDSTTIVSFVEDEEAFNGSIHDRFARLDTDRDGFLSYAELLKELQSLRVFETHFG 71

Query: 61  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
           IDVK + DEL+R+Y ++F QFD DSNG VD++EF    K MMLA+A G+G LP+QMALE+
Sbjct: 72  IDVKTEPDELARVYDSLFVQFDHDSNGAVDLEEFKAETKQMMLAMANGLGCLPVQMALEE 131

Query: 121 DGFLMKAVQREAAKAFA 138
           D FL KAV+RE+AK  A
Sbjct: 132 DSFLKKAVERESAKVLA 148

[Close]

BLAST of Lsi11G013850 vs. NCBI nr
Match: XP_038887184.1 (uncharacterized protein LOC120077371 [Benincasa hispida])

HSP 1 Score: 257.7 bits (657), Expect = 5.7e-65
Identity = 126/137 (91.97%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 60
           MSVELLDG TIVNFVEDEEAFNGW REHF  LDTDGDGFLSYAEMLKELH+LRVSEADFG
Sbjct: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFNHLDTDGDGFLSYAEMLKELHSLRVSEADFG 60

Query: 61  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            DVKPD D+LSR+YGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK
Sbjct: 61  TDVKPDADDLSRLYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120

Query: 121 DGFLMKAVQREAAKAFA 138
           DGFLMKAVQREA KAF+
Sbjct: 121 DGFLMKAVQREATKAFS 137

[Close]

BLAST of Lsi11G013850 vs. NCBI nr
Match: XP_004144609.1 (uncharacterized protein LOC101208968 [Cucumis sativus] >KAE8645726.1 hypothetical protein Csa_020280 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 9.1e-63
Identity = 124/137 (90.51%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 60
           MSVELLDG TIVNFVEDEEAFNGW REHFTRLDTD DGFLSYAEMLKELH LRVSEADFG
Sbjct: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60

Query: 61  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            DVKPD DELS++Y AVF QFDRDS+GKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK
Sbjct: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120

Query: 121 DGFLMKAVQREAAKAFA 138
           DGFLMKAVQREA KAF+
Sbjct: 121 DGFLMKAVQREATKAFS 137

[Close]

BLAST of Lsi11G013850 vs. NCBI nr
Match: XP_008455505.1 (PREDICTED: uncharacterized protein LOC103495656 [Cucumis melo] >KAA0059136.1 uncharacterized protein E6C27_scaffold430G00460 [Cucumis melo var. makuwa] >TYK21611.1 uncharacterized protein E5676_scaffold150G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 60
           MSVELLDG TIVNFVEDEEAFNGW REHFTRLDTD DGFLSYAEMLKE +TLRVSEADFG
Sbjct: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKEFYTLRVSEADFG 60

Query: 61  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            DVK D DELS++YGAVF QFDRDS+GKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK
Sbjct: 61  TDVKLDADELSQLYGAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120

Query: 121 DGFLMKAVQREAAKAFA 138
           DGFLMKAVQREA KAF+
Sbjct: 121 DGFLMKAVQREATKAFS 137

[Close]

BLAST of Lsi11G013850 vs. NCBI nr
Match: XP_022135904.1 (uncharacterized protein LOC111007741 [Momordica charantia])

HSP 1 Score: 201.1 bits (510), Expect = 6.4e-48
Identity = 96/134 (71.64%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 60
           MSVE+LD  TI+NFVEDEEAF  WIRE F  LD D DG LSYAEML+ELH+LRV E  FG
Sbjct: 1   MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFG 60

Query: 61  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
           +D KPD DELSR+YGAVF QFDR+SNG+VD++EFM G K +M+AIAEGMGFLP+QMALE+
Sbjct: 61  VDAKPDPDELSRLYGAVFMQFDRNSNGEVDLEEFMAGTKRIMVAIAEGMGFLPLQMALEE 120

Query: 121 DGFLMKAVQREAAK 135
           DGFLMKAV+ E ++
Sbjct: 121 DGFLMKAVRSEKSR 134

[Close]

BLAST of Lsi11G013850 vs. NCBI nr
Match: KAA8524786.1 (hypothetical protein F0562_011209 [Nyssa sinensis])

HSP 1 Score: 187.6 bits (475), Expect = 7.3e-44
Identity = 93/137 (67.88%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 1   MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 60
           MSVE+LD TTIV+FVEDEEAFNG I + F RLDTD DGFLSYAE+LKEL +LRV E  FG
Sbjct: 12  MSVEVLDSTTIVSFVEDEEAFNGSIHDRFARLDTDRDGFLSYAELLKELQSLRVFETHFG 71

Query: 61  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
           IDVK + DEL+R+YG++F QFD DSNG VD++EF    K MMLA+A G+G LP+QMALE+
Sbjct: 72  IDVKTEPDELARVYGSLFVQFDHDSNGAVDLEEFKAETKQMMLAMANGLGCLPVQMALEE 131

Query: 121 DGFLMKAVQREAAKAFA 138
           D FL KAV+RE+AK  A
Sbjct: 132 DSFLKKAVERESAKVLA 148

[Close]

BLAST of Lsi11G013850 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 120.9 bits (302), Expect = 7.8e-28
Identity = 61/136 (44.85%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 1   MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 60
           M V L+DG+T+ +FV+DEE F   + E F  LD + DG LS +E+ K   ++R+ E+ FG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMAL-- 120
           +DV    DEL+ +Y ++F +FD D +G VD++EF   MK ++LAIA+G+G  PI M L  
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 EKDGFLMKAVQREAAK 135
           + D FL KA   EA+K
Sbjct: 121 DDDNFLKKAADLEASK 136

[Close]

BLAST of Lsi11G013850 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 61.6 bits (148), Expect = 5.6e-10
Identity = 38/128 (29.69%), Postives = 67/128 (52.34%), Query Frame = 0


Query: 5   LLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVK 64
           ++   T++ F+ D ++F     ++F  LD D +G LS +E+ + L+ +   E+    +V 
Sbjct: 5   VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVES----EVA 64

Query: 65  PDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEKDGFL 124
           P  DE   +Y A+F +F  D   K     F   +  ++ A+A G+G  P+ M +  DG +
Sbjct: 65  PG-DETDNVYNAIFERFGEDLVPK----NFRDLIAEILTAMARGIGNSPVIMVVHNDGLI 123

Query: 125 MKAVQREA 133
           MKAV  E+
Sbjct: 125 MKAVLHES 123

[Close]

BLAST of Lsi11G013850 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-09
Identity = 37/119 (31.09%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 4   ELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDV 63
           ++LDG+ IV  VE+E+ F+ ++ + F +LD D DG LS  E+   +  +    A  G+  
Sbjct: 13  QVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADI---GAALGLPA 72

Query: 64  KPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEKDG 123
           +  + +   IY  V  +F   S  KV   EF   + +++L +A G+   PI + L  DG
Sbjct: 73  QGTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPI-VILRMDG 127

[Close]

BLAST of Lsi11G013850 vs. TAIR 10
Match: AT4G27790.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 43.5 bits (101), Expect = 1.6e-04
Identity = 29/93 (31.18%), Postives = 45/93 (48.39%), Query Frame = 0


Query: 6   LDGTTIVNFVEDEEAFNG----WI-REHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFG 65
           LD     NF+  E++ NG    W+ +E  T +DT+GDG L Y E +K  + +    A F 
Sbjct: 190 LDIEEFNNFLHPEDSRNGDTQRWVLKERMTGMDTNGDGKLEYKEFVKNAYEMYKEFAKF- 249

Query: 66  IDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDE 94
              + + DE       +F + DRD +  +  DE
Sbjct: 250 ---EKEEDENVPTPQLLFAEMDRDKDRFLVADE 278

[Close]

BLAST of Lsi11G013850 vs. TAIR 10
Match: AT4G32060.1 (calcium-binding EF hand family protein )

HSP 1 Score: 41.6 bits (96), Expect = 6.0e-04
Identity = 24/84 (28.57%), Postives = 37/84 (44.05%), Query Frame = 0


Query: 27  EHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSN 86
           E F   D D DG +S+ E +  +  L + E+ F +                F  FD D+N
Sbjct: 216 EFFMLFDVDNDGLISFKEYIFFVTLLSIPESSFAV---------------AFKMFDTDNN 275

Query: 87  GKVDVDEFMMGMKNMMLAIAEGMG 111
           G++D +EF   M  M     +G+G
Sbjct: 276 GEIDKEEFKTVMSLMRSQHRQGVG 284

The following BLAST results are available for this feature:

BLAST of Lsi11G013850 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi11G013850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UY59	4.9e-62	89.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C0M6	4.9e-62	89.78	uncharacterized protein LOC103495656 OS=Cucumis melo OX=3656 GN=LOC103495656 PE=...	[more]
A0A6J1C2T1	3.1e-48	71.64	uncharacterized protein LOC111007741 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5J5A3Z9	3.5e-44	67.88	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_011209 PE=4 SV=1	[more]
A0A5J5A5Q8	2.3e-43	67.15	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_011204 PE=4 SV=1	[more]

BLAST of Lsi11G013850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887184.1	5.7e-65	91.97	uncharacterized protein LOC120077371 [Benincasa hispida]	[more]
XP_004144609.1	9.1e-63	90.51	uncharacterized protein LOC101208968 [Cucumis sativus] >KAE8645726.1 hypothetica...	[more]
XP_008455505.1	1.0e-61	89.78	PREDICTED: uncharacterized protein LOC103495656 [Cucumis melo] >KAA0059136.1 unc...	[more]
XP_022135904.1	6.4e-48	71.64	uncharacterized protein LOC111007741 [Momordica charantia]	[more]
KAA8524786.1	7.3e-44	67.88	hypothetical protein F0562_011209 [Nyssa sinensis]	[more]

BLAST of Lsi11G013850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	7.8e-28	44.85	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	5.6e-10	29.69	Calcium-binding EF hand family protein	[more]
AT4G38810.2	1.6e-09	31.09	Calcium-binding EF-hand family protein	[more]
AT4G27790.1	1.6e-04	31.18	Calcium-binding EF hand family protein	[more]
AT4G32060.1	6.0e-04	28.57	calcium-binding EF hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 24..52 e-value: 0.21 score: 20.7 coord: 73..101 e-value: 0.0081 score: 25.4
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 25..96 e-value: 1.3E-10 score: 41.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 25..55 score: 9.241175
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 11.556493
None	No IPR available	GENE3D	1.10.238.10		coord: 6..106 e-value: 8.1E-14 score: 54.0
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..134
None	No IPR available	PANTHER	PTHR34574:SF10	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-LIKE	coord: 1..134
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 25..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G013850.1	Lsi11G013850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding