Lsi11G013050 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G013050
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Serine/threonine-protein kinase pakG
Location	chr11: 21667650 .. 21667988 (+)
RNA-Seq Expression	Lsi11G013050
Synteny	Lsi11G013050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGACTGCCTCAGGGAGTCCATGCGCAAGTTAGCCGTCTGGTTCACCAAAACCTTCAAACCAATCATGACGCACGACGAGCTCGAACCTATAATGGCTACTTTAGGCTTCATCGCCCTAGAACCGGCCGTCAACGGCGCCGGAATCTCCTGGAAATCCTATAAATACTCCGCCGCTGATTGCCGAACCAAGTCGGTTTCTCCGTCGCCGCCAACACCGCGACTGCCGTATCCGAGAATCGACGGTCTTCACATTTATACATACAGAGCATTTCTCGATGCCGTCAATTTTTATCTCGAGAAATTTGATATCTCCGATCTCTTCCATATTAGGTAA

mRNA sequence

ATGGAGGACTGCCTCAGGGAGTCCATGCGCAAGTTAGCCGTCTGGTTCACCAAAACCTTCAAACCAATCATGACGCACGACGAGCTCGAACCTATAATGGCTACTTTAGGCTTCATCGCCCTAGAACCGGCCGTCAACGGCGCCGGAATCTCCTGGAAATCCTATAAATACTCCGCCGCTGATTGCCGAACCAAGTCGGTTTCTCCGTCGCCGCCAACACCGCGACTGCCGTATCCGAGAATCGACGGTCTTCACATTTATACATACAGAGCATTTCTCGATGCCGTCAATTTTTATCTCGAGAAATTTGATATCTCCGATCTCTTCCATATTAGGTAA

Coding sequence (CDS)

ATGGAGGACTGCCTCAGGGAGTCCATGCGCAAGTTAGCCGTCTGGTTCACCAAAACCTTCAAACCAATCATGACGCACGACGAGCTCGAACCTATAATGGCTACTTTAGGCTTCATCGCCCTAGAACCGGCCGTCAACGGCGCCGGAATCTCCTGGAAATCCTATAAATACTCCGCCGCTGATTGCCGAACCAAGTCGGTTTCTCCGTCGCCGCCAACACCGCGACTGCCGTATCCGAGAATCGACGGTCTTCACATTTATACATACAGAGCATTTCTCGATGCCGTCAATTTTTATCTCGAGAAATTTGATATCTCCGATCTCTTCCATATTAGGTAA

Protein sequence

MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR

Homology

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BLAST of Lsi11G013050 vs. ExPASy TrEMBL
Match: A0A0A0K4Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027830 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 5.4e-59
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 113
           DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR
Sbjct: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 112

[Close]

BLAST of Lsi11G013050 vs. ExPASy TrEMBL
Match: A0A5A7UWP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00080 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.0e-58
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKY+AA
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYTAA 60

Query: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 113
           DCRT SVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR
Sbjct: 61  DCRTTSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 112

[Close]

BLAST of Lsi11G013050 vs. ExPASy TrEMBL
Match: A0A1S3BQB8 (uncharacterized protein LOC103492564 OS=Cucumis melo OX=3656 GN=LOC103492564 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.0e-58
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKY+AA
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYTAA 60

Query: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 113
           DCRT SVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR
Sbjct: 61  DCRTTSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 112

[Close]

BLAST of Lsi11G013050 vs. ExPASy TrEMBL
Match: A0A6J1GMI7 (uncharacterized protein LOC111455327 OS=Cucurbita moschata OX=3662 GN=LOC111455327 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.3e-56
Identity = 107/112 (95.54%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLA+W TKTFKPIMTHDELEPIM TLGFIALEPAVNGAGISWKSYKYSAA
Sbjct: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 113
           DCRTKSVSP PP PRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR
Sbjct: 61  DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 112

[Close]

BLAST of Lsi11G013050 vs. ExPASy TrEMBL
Match: A0A6J1I0G9 (uncharacterized protein LOC111468318 OS=Cucurbita maxima OX=3661 GN=LOC111468318 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.2e-55
Identity = 106/112 (94.64%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLA+W TKTFKPIMTHDELEPIM TLGFIALEPAVNGAGISWKSYKYSAA
Sbjct: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 113
           D RTKSVSP PP PRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR
Sbjct: 61  DFRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 112

[Close]

BLAST of Lsi11G013050 vs. NCBI nr
Match: XP_004144902.1 (uncharacterized protein LOC101221709 [Cucumis sativus] >KGN43367.1 hypothetical protein Csa_020205 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 1.1e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 113
           DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR
Sbjct: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 112

[Close]

BLAST of Lsi11G013050 vs. NCBI nr
Match: XP_038887596.1 (uncharacterized protein LOC120077705 [Benincasa hispida])

HSP 1 Score: 236.5 bits (602), Expect = 1.1e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 113
           DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR
Sbjct: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 112

[Close]

BLAST of Lsi11G013050 vs. NCBI nr
Match: XP_008451192.1 (PREDICTED: uncharacterized protein LOC103492564 [Cucumis melo])

HSP 1 Score: 233.0 bits (593), Expect = 1.2e-57
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKY+AA
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYTAA 60

Query: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 113
           DCRT SVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR
Sbjct: 61  DCRTTSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 112

[Close]

BLAST of Lsi11G013050 vs. NCBI nr
Match: KAA0059598.1 (uncharacterized protein E6C27_scaffold54G00190 [Cucumis melo var. makuwa] >TYK08131.1 uncharacterized protein E5676_scaffold886G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 233.0 bits (593), Expect = 1.2e-57
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKY+AA
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYTAA 60

Query: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 113
           DCRT SVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR
Sbjct: 61  DCRTTSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 112

[Close]

BLAST of Lsi11G013050 vs. NCBI nr
Match: XP_022952714.1 (uncharacterized protein LOC111455327 [Cucurbita moschata])

HSP 1 Score: 227.3 bits (578), Expect = 6.8e-56
Identity = 107/112 (95.54%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLA+W TKTFKPIMTHDELEPIM TLGFIALEPAVNGAGISWKSYKYSAA
Sbjct: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 113
           DCRTKSVSP PP PRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR
Sbjct: 61  DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIR 112

The following BLAST results are available for this feature:

BLAST of Lsi11G013050 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi11G013050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4Z6	5.4e-59	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027830 PE=4 SV=1	[more]
A0A5A7UWP3	6.0e-58	98.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BQB8	6.0e-58	98.21	uncharacterized protein LOC103492564 OS=Cucumis melo OX=3656 GN=LOC103492564 PE=...	[more]
A0A6J1GMI7	3.3e-56	95.54	uncharacterized protein LOC111455327 OS=Cucurbita moschata OX=3662 GN=LOC1114553...	[more]
A0A6J1I0G9	6.2e-55	94.64	uncharacterized protein LOC111468318 OS=Cucurbita maxima OX=3661 GN=LOC111468318...	[more]

BLAST of Lsi11G013050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144902.1	1.1e-58	100.00	uncharacterized protein LOC101221709 [Cucumis sativus] >KGN43367.1 hypothetical ...	[more]
XP_038887596.1	1.1e-58	100.00	uncharacterized protein LOC120077705 [Benincasa hispida]	[more]
XP_008451192.1	1.2e-57	98.21	PREDICTED: uncharacterized protein LOC103492564 [Cucumis melo]	[more]
KAA0059598.1	1.2e-57	98.21	uncharacterized protein E6C27_scaffold54G00190 [Cucumis melo var. makuwa] >TYK08...	[more]
XP_022952714.1	6.8e-56	95.54	uncharacterized protein LOC111455327 [Cucurbita moschata]	[more]

BLAST of Lsi11G013050 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G013050.1	Lsi11G013050.1	mRNA