Lsi11G011720 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G011720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	SAUR-like auxin-responsive protein family
Location	chr11: 20209341 .. 20212406 (-)
RNA-Seq Expression	Lsi11G011720
Synteny	Lsi11G011720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACACCAATTCCCATCACAGGAGCTACCATTTCCAATTCAAAATGGGCATCCCTTTGCCAAGAATTGTAATTCCAAAGCACTTTCTGAGGCGTATTCGTCAGTTGTCACGAACTGCCATCGTGCCGAAAGGCCACTTGGCTGTGTATGTTGGAGAGACAGAAAAGAAGAGATTTTTGGTCCCTGTTGAATATTTGAGCCATCCTTCATTCCATAGCTTGTTGAGTCAAGCTGAAGAAGAGTTTGGATATGATCATCCTATGGGTGGCCTTACTTTCTCTTGTACAGAAGAGATTTTCTTCAGCCATTTGGCTAGAGACAGTTAGATTGAAAATACTCTTTATGGCCTTGAATAAAGGCCGATTGGCGATCGTCAAAGATGCTTACTAACACCACTCACTCGATTACCATTTTTGAATTGACAGAGTTATGAAATTGGATACAGAAATATATTATCTTAATGTATATTTTCTTATGTCATTGGATATATTTCTGTGTGTAAAAAGTCATTACCATAATATTCATATCTATCAACAGAAGTGACATGAAATAACTTCTAAGTAAATTTAGCCTTCTACTATCTTCCATATCAGTTCATTCTGCAAAAATATGGGACAAGTTAATCCAAAACTTAGGCAGAAATGAGCGTTATTGGAACTTGGAAAGAAGAATTGTAGCTAATATGGAGGACACATTTAGATGTAAATGACATTTTTTTTTTCATAATTATGATCTTGGTTTGATTTTGTAGGATTGGGGTATGTCTTCTTCTGTAGTTAGTTCTTGAGTTCCTTTTTTGTTGGGCTTGTTTTTCTCTATGTTATTGTCATTCTTTCATTCTTTTCTCAACTAAAGCTTGGTTTCTTACCAAAAAGAGATATAAATGACATGACAGATCCATTAATGTTCATGTATTATAAGACTTATGATATGTTCAAACTTCAAACTGCGATACTGTCCATTTCCTTTATTTCTGCAGCATCTTTCTGCATATTAATAGGTGGGTAACAAGAGGTATGAGTGTCTCAAACTATCAAAAAGCAAATAGGTTTTCTACATGACATAAAACGATGCCTTCGGTTTACGCTCAATACCAAAGAGTGGTCCATCCTAAAGCGTCGTCTCGCTGTAAAGAATGCAGAGGCTTCAAATGACCATGACATCTTCAAATCTACTTTTCTTGGAGATTGTTTGCTTTTACATTAGGTCATTATGTTTCAGCAAATGGTTACATATTGCCAGTAAACATAATGAATTCACATTCTTATTTTGGTAAGAAATGGAAGACATTTCCATGTGGTTAGTAATGAGCTAAGGCCTTCATTGACTGTTATATTTCTGTCTAATAACTGTCCTAATCTTTAAGGATTCATTCTACCTTATCTTTAGCATCCATGTTAAGAAACTTATTAATGAGTTCTCACCATTACAAGTCTTCCACACTCCCACATTTAGAAGAAATTCCCAAGTATTTTTCTTCCAACATCTTCAAAGCCTTTGAAAATTTCAGTACCATGGGTATTGGGTTGCCGAGTATTACTCGTGCTAGGCAAGTCCATTGGCGATCTCGATTGACGAGCAATCGAGCAGCTTAGAAGGCCCAAAGATGTTCAAAAGGGCTACTTTATAGTTTATATTAGAGAGGGACAACAAAAGCGGTTTGTCATTCCGCTACCTTATTTGAACCAACCTTTGTTTCAAGACTTGTTAAGTCAATGGGTGGCATCGCAGTTCCATGTAGTGAAAGATTTTATCTTCATCATACTTCTCAATTTAGAGCTTAGTTTTGCCATCATACATCTCATTGTAGAAATTGAGAAAATCTAGTGGAGACCAGAATATCGACCGTAATGTCTCTCTAAAAGAGGCGTTTGGGATAAGAACCGGAGTTGTGAAGTCTGAGGAAGGAGTTAACAAAGTATAAAATTGATTTTTTTTTAGTTACGAGGCCACGAACTCCTTGGATGAACTACACTCCTCCCAACTCCAACTCTTTAGGCCAAACACCCCTTTAAAGACTATCGTTAGAGTACCGGAGAACTCCATTCAATTCTTGATGGATGCCGAGTTTTCGAGATCCTTGAACCTATTCATTTGCTTCTTTCAGTTTCGTTCTTAACATGAGAGGCACATCCACTAATTTCTATCAAATTTGAAATTCCTATTTGAGATAGCATTAGATTTCTACATGAAAACCATAGAAATGCAATACATTCAGTCAAATGATGAAGCTCCAAAGTTTGGAGTATGAAAGAGAAAAACTGAGTTCTACTGTTTTGTTCAACTCTTTTGATAGCCCAAATGAATATGGATAATGGATTTGCCCTATAAATTTTGACTTTTCGTTTTGAATTTTTATGATAATGGTGATCAGAAAATCCGACCCACAGTCAGAAAATTTTCAGACTATTTGACAATTAAGTTGATGAGATTTTTTTTTGTGAAAAGGACTGAATTGTTATAAAATTTGAAAGTATAGAGACTAAATTGTTACATGTTAAAGTTCAAGGTCTAGATTTTACAAATTTGAAAGTATAAGGACGAAGGGCTCGTTTGGAATGACTTTCTAAGTGTTTATAAGTCCAAAAAAAGTATTTATAAACATTTAGAAATTCAATTCAAACGAGCTATAAATCATTACAAATCCAAATTCAGAGACTAAATCGCTACTTCTATGAAAGTTTTAGGTACAAAAAATGAAATTTGTGTTGTTTGTGTTGTTCTGTACAAACAACACAAAATCTTCTCATTCCCTTCTCTTTTTCCTCAAGGAACATTAAAACATTCTTCCATTGATGGGACTTCGTCGTCTTTTAAGACGGTCTTCAATGACAGGAAACCAGAGAGGTTCCGCTGTTATTAAGGGCTATTGTGCAGTCTATGTTGGAGAGAACCAAAAGAAGCGGTTCGTGATTCCAGTTACTTACTTGAATCAACCATGTTTTCAAGACTTGCTTAGTCAAGCTACTGAAGAATTTGAATATTATCATCCAATGGGTGGTCTCACATTTCACTGCAGAGATGATATCTTTGCTAATATGATCTCTCACTTGAATGAACAACTATGA

mRNA sequence

AACACCAATTCCCATCACAGGAGCTACCATTTCCAATTCAAAATGGGCATCCCTTTGCCAAGAATTGTAATTCCAAAGCACTTTCTGAGGCGTATTCGTCAGTTGTCACGAACTGCCATCGTGCCGAAAGGCCACTTGGCTGTGTATGTTGGAGAGACAGAAAAGAAGAGATTTTTGGTCCCTGTTGAATATTTGAGCCATCCTTCATTCCATAGCTTGTTGAGTCAAGCTGAAGAAGAGTTTGGATATGATCATCCTATGGGTGGCCTTACTTTCTCTTGTACAGAAGAGATTTTCTTCAGCCATTTGGCTAGAGACAGAAACCAGAGAGGTTCCGCTGTTATTAAGGGCTATTGTGCAGTCTATGTTGGAGAGAACCAAAAGAAGCGGTTCGTGATTCCAGTTACTTACTTGAATCAACCATGTTTTCAAGACTTGCTTAGTCAAGCTACTGAAGAATTTGAATATTATCATCCAATGGGTGGTCTCACATTTCACTGCAGAGATGATATCTTTGCTAATATGATCTCTCACTTGAATGAACAACTATGA

Coding sequence (CDS)

AACACCAATTCCCATCACAGGAGCTACCATTTCCAATTCAAAATGGGCATCCCTTTGCCAAGAATTGTAATTCCAAAGCACTTTCTGAGGCGTATTCGTCAGTTGTCACGAACTGCCATCGTGCCGAAAGGCCACTTGGCTGTGTATGTTGGAGAGACAGAAAAGAAGAGATTTTTGGTCCCTGTTGAATATTTGAGCCATCCTTCATTCCATAGCTTGTTGAGTCAAGCTGAAGAAGAGTTTGGATATGATCATCCTATGGGTGGCCTTACTTTCTCTTGTACAGAAGAGATTTTCTTCAGCCATTTGGCTAGAGACAGAAACCAGAGAGGTTCCGCTGTTATTAAGGGCTATTGTGCAGTCTATGTTGGAGAGAACCAAAAGAAGCGGTTCGTGATTCCAGTTACTTACTTGAATCAACCATGTTTTCAAGACTTGCTTAGTCAAGCTACTGAAGAATTTGAATATTATCATCCAATGGGTGGTCTCACATTTCACTGCAGAGATGATATCTTTGCTAATATGATCTCTCACTTGAATGAACAACTATGA

Protein sequence

NTNSHHRSYHFQFKMGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSAVIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNEQL

Homology

[Close]

BLAST of Lsi11G011720 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.5e-20
Identity = 46/68 (67.65%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 32  IRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLT 91
           IR+ S+ A  PKG+LAVYVGE + KRF++PV YL+ PSF  LLSQAEEEFGYDHPMGGLT
Sbjct: 8   IRKASKAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLT 67

Query: 92  FSCTEEIF 100
             C+E++F
Sbjct: 68  IPCSEDVF 74

[Close]

BLAST of Lsi11G011720 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.8e-20
Identity = 44/76 (57.89%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 30  RRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGG 89
           ++I   S  +  PKG LAVYVGE++KKR+LVP+ YLS PSF +LLS++EEEFG+DHPMGG
Sbjct: 11  KKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGG 70

Query: 90  LTFSCTEEIFFSHLAR 106
           LT  C E+ F +  +R
Sbjct: 71  LTIPCPEDTFINVTSR 86

[Close]

BLAST of Lsi11G011720 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 107 RNQRGSAVI---KGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGL 166
           RN+  S V+   KGY AVYVGEN  KRFVIPV++LNQP FQDLLSQA EEF Y HPMGGL
Sbjct: 15  RNEASSKVLDAPKGYLAVYVGENM-KRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGL 74

Query: 167 TFHCRDDIFANMISHLNEQ 183
           T  C +D+F ++ S L+ Q
Sbjct: 75  TIPCSEDLFQHITSCLSAQ 92

[Close]

BLAST of Lsi11G011720 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-19
Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 33  RQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTF 92
           R  +  +  PKG LAVYVGE++KKR+LVP+ YL+ PSF +LLS++EEEFG+DHPMGGLT 
Sbjct: 16  RSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTI 75

Query: 93  SCTEEIFFSHLAR 106
            C E+ F +  +R
Sbjct: 76  PCPEDTFINVTSR 88

[Close]

BLAST of Lsi11G011720 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.3e-19
Identity = 44/68 (64.71%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 32  IRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLT 91
           IR+ S     PKG+LAVYVGE + KRF++PV Y++ PSF  LL+QAEEEFGYDHPMGGLT
Sbjct: 8   IRKASNAVDAPKGYLAVYVGE-KMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLT 67

Query: 92  FSCTEEIF 100
             C+EE+F
Sbjct: 68  IPCSEEVF 74

[Close]

BLAST of Lsi11G011720 vs. ExPASy TrEMBL
Match: A0A6J1C452 (indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN=LOC111007759 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 4.4e-50
Identity = 111/174 (63.79%), Postives = 125/174 (71.84%), Query Frame = 0


Query: 15  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGET-EKKRFLVPVEYLSHPSFHSL 74
           MGI LPRIV  KHFLRRI Q SRTA VPKGHLAVYVGET +KKRFLVPV YLS+PSFHSL
Sbjct: 1   MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60

Query: 75  LSQAEEEFGYDHPMGGLTFSCTEEIFF--SHLARDRNQRGSAVIKGYCAVYVGENQKK-- 134
           LSQ+EEEFGYDHPMGGLTFSCTEEIFF  S + R +     + + G  A     +  K  
Sbjct: 61  LSQSEEEFGYDHPMGGLTFSCTEEIFFRLSGITRAKQVHWRSPLTGNQADLKAADVPKGA 120

Query: 135 ------RFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMIS 178
                 R  IP++YLNQP FQDLLSQA EEF Y HPMGG+T  C +D F ++ S
Sbjct: 121 LQFMLERDKIPISYLNQPLFQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTS 174

[Close]

BLAST of Lsi11G011720 vs. ExPASy TrEMBL
Match: A0A5N5LHL4 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_014495 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.0e-47
Identity = 102/186 (54.84%), Postives = 124/186 (66.67%), Query Frame = 0


Query: 15  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLL 74
           M I +P IV  K  LRRI     T+ V KGH AVYVGE +KKRF +PV YL HPS  +LL
Sbjct: 1   MAIRVPGIVNAKQILRRIIFSQETSNVRKGHFAVYVGEAQKKRFTIPVSYLKHPSLQNLL 60

Query: 75  SQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR------------------DRNQRGSAVIK 134
           SQAEEEFG++HP GGL+  C+EE F   + R                  + ++  S V K
Sbjct: 61  SQAEEEFGFNHPTGGLSIPCSEEEFTGLILRMSSLEVAMETKEQDMAGPETSKASSTVPK 120

Query: 135 GYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMI 183
           G  AVYVGE QKKRFV+P++YLNQP FQDLLSQA EEF Y+HPMGGLT  CR+DIF ++I
Sbjct: 121 GCLAVYVGEIQKKRFVVPISYLNQPTFQDLLSQAAEEFGYHHPMGGLTIPCREDIFHDII 180

[Close]

BLAST of Lsi11G011720 vs. ExPASy TrEMBL
Match: A0A6N2L447 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS179154 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.5e-47
Identity = 100/180 (55.56%), Postives = 122/180 (67.78%), Query Frame = 0


Query: 13  FKMGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHS 72
           F M I +P IVI K  LRRI     T+ V KGH AVYVGE +KKRF +P+ YL HPS  +
Sbjct: 189 FDMAIRVPGIVIGKQILRRIIFSQETSNVRKGHFAVYVGEAQKKRFTIPISYLKHPSLQN 248

Query: 73  LLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR----------DRNQRGSAVIKGYCAVY 132
           LLSQA EEFG++HP GGL+  C+EE F   + R            ++  S V KG  AVY
Sbjct: 249 LLSQAAEEFGFNHPTGGLSIPCSEEEFTGLILRMSKFLQLSPSAASKASSTVPKGCLAVY 308

Query: 133 VGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNEQ 183
           VGE  KKRFV+P++YLNQP FQDLLSQA EEF Y+HPMGGLT  CR+DIF ++IS  ++Q
Sbjct: 309 VGEIGKKRFVVPISYLNQPTFQDLLSQAAEEFGYHHPMGGLTIPCREDIFHDIISCFDQQ 368

[Close]

BLAST of Lsi11G011720 vs. ExPASy TrEMBL
Match: A0A5C7IEC7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008620 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.8e-47
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 15  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLL 74
           MG  LPRIV  K  L+R        IVPKGH AVYVGETEKKRF+VP+ YL HPSF +LL
Sbjct: 1   MGFHLPRIVSAKKNLKRPIFSPENMIVPKGHFAVYVGETEKKRFMVPISYLKHPSFQNLL 60

Query: 75  SQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSAVIKGYCAVYVGENQKKRFVIP 134
            QAEEEFG+DHP GGLT  C+EE  F+  A   +   + V  G+  VYVGE+Q+KRFVIP
Sbjct: 61  RQAEEEFGFDHPAGGLTIPCSEESSFN--ASQSSTMTTVVPNGHLIVYVGESQRKRFVIP 120

Query: 135 VTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN 181
           V++LN   FQDLL QA EEF + HPMGGLT  C++DIF ++IS L+
Sbjct: 121 VSFLNSSLFQDLLYQAEEEFGFDHPMGGLTIPCKEDIFIDLISQLS 164

[Close]

BLAST of Lsi11G011720 vs. ExPASy TrEMBL
Match: A0A5C7IDG9 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008618 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 9.5e-45
Identity = 99/179 (55.31%), Postives = 119/179 (66.48%), Query Frame = 0


Query: 15  MGIPLPRIV-IPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSL 74
           MG  LPRIV   K  L+         +VPKGH AVYVGETEKKR++VP+ YL HPSF +L
Sbjct: 1   MGFHLPRIVNANKQTLKHPLFSPENIVVPKGHFAVYVGETEKKRYVVPISYLKHPSFQTL 60

Query: 75  LSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSA------------VIKGYCAV 134
           LSQAEEEFG+DHP GGLT  C+EE F       +  R S+            V KG+ AV
Sbjct: 61  LSQAEEEFGFDHPNGGLTIPCSEEAFMDLTCTKKLLRQSSFPSSQSSTMTTDVPKGHLAV 120

Query: 135 YVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN 181
           YVGE+Q+ RFVI V++LN   FQDLLSQA EEF + HPMGGLT  CR+DIF ++IS L+
Sbjct: 121 YVGESQRNRFVISVSFLNHSSFQDLLSQAEEEFGFDHPMGGLTIPCREDIFIDLISQLS 179

[Close]

BLAST of Lsi11G011720 vs. NCBI nr
Match: XP_022135927.1 (indole-3-acetic acid-induced protein ARG7-like [Momordica charantia])

HSP 1 Score: 207.6 bits (527), Expect = 9.1e-50
Identity = 111/174 (63.79%), Postives = 125/174 (71.84%), Query Frame = 0


Query: 15  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGET-EKKRFLVPVEYLSHPSFHSL 74
           MGI LPRIV  KHFLRRI Q SRTA VPKGHLAVYVGET +KKRFLVPV YLS+PSFHSL
Sbjct: 1   MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60

Query: 75  LSQAEEEFGYDHPMGGLTFSCTEEIFF--SHLARDRNQRGSAVIKGYCAVYVGENQKK-- 134
           LSQ+EEEFGYDHPMGGLTFSCTEEIFF  S + R +     + + G  A     +  K  
Sbjct: 61  LSQSEEEFGYDHPMGGLTFSCTEEIFFRLSGITRAKQVHWRSPLTGNQADLKAADVPKGA 120

Query: 135 ------RFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMIS 178
                 R  IP++YLNQP FQDLLSQA EEF Y HPMGG+T  C +D F ++ S
Sbjct: 121 LQFMLERDKIPISYLNQPLFQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTS 174

[Close]

BLAST of Lsi11G011720 vs. NCBI nr
Match: KAB5541521.1 (hypothetical protein DKX38_014495 [Salix brachista])

HSP 1 Score: 198.7 bits (504), Expect = 4.2e-47
Identity = 102/186 (54.84%), Postives = 124/186 (66.67%), Query Frame = 0


Query: 15  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLL 74
           M I +P IV  K  LRRI     T+ V KGH AVYVGE +KKRF +PV YL HPS  +LL
Sbjct: 1   MAIRVPGIVNAKQILRRIIFSQETSNVRKGHFAVYVGEAQKKRFTIPVSYLKHPSLQNLL 60

Query: 75  SQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR------------------DRNQRGSAVIK 134
           SQAEEEFG++HP GGL+  C+EE F   + R                  + ++  S V K
Sbjct: 61  SQAEEEFGFNHPTGGLSIPCSEEEFTGLILRMSSLEVAMETKEQDMAGPETSKASSTVPK 120

Query: 135 GYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMI 183
           G  AVYVGE QKKRFV+P++YLNQP FQDLLSQA EEF Y+HPMGGLT  CR+DIF ++I
Sbjct: 121 GCLAVYVGEIQKKRFVVPISYLNQPTFQDLLSQAAEEFGYHHPMGGLTIPCREDIFHDII 180

[Close]

BLAST of Lsi11G011720 vs. NCBI nr
Match: TXG67345.1 (hypothetical protein EZV62_008620 [Acer yangbiense])

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-46
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 15  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLL 74
           MG  LPRIV  K  L+R        IVPKGH AVYVGETEKKRF+VP+ YL HPSF +LL
Sbjct: 1   MGFHLPRIVSAKKNLKRPIFSPENMIVPKGHFAVYVGETEKKRFMVPISYLKHPSFQNLL 60

Query: 75  SQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSAVIKGYCAVYVGENQKKRFVIP 134
            QAEEEFG+DHP GGLT  C+EE  F+  A   +   + V  G+  VYVGE+Q+KRFVIP
Sbjct: 61  RQAEEEFGFDHPAGGLTIPCSEESSFN--ASQSSTMTTVVPNGHLIVYVGESQRKRFVIP 120

Query: 135 VTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN 181
           V++LN   FQDLL QA EEF + HPMGGLT  C++DIF ++IS L+
Sbjct: 121 VSFLNSSLFQDLLYQAEEEFGFDHPMGGLTIPCKEDIFIDLISQLS 164

[Close]

BLAST of Lsi11G011720 vs. NCBI nr
Match: TXG67343.1 (hypothetical protein EZV62_008618 [Acer yangbiense])

HSP 1 Score: 189.9 bits (481), Expect = 2.0e-44
Identity = 99/179 (55.31%), Postives = 119/179 (66.48%), Query Frame = 0


Query: 15  MGIPLPRIV-IPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSL 74
           MG  LPRIV   K  L+         +VPKGH AVYVGETEKKR++VP+ YL HPSF +L
Sbjct: 1   MGFHLPRIVNANKQTLKHPLFSPENIVVPKGHFAVYVGETEKKRYVVPISYLKHPSFQTL 60

Query: 75  LSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSA------------VIKGYCAV 134
           LSQAEEEFG+DHP GGLT  C+EE F       +  R S+            V KG+ AV
Sbjct: 61  LSQAEEEFGFDHPNGGLTIPCSEEAFMDLTCTKKLLRQSSFPSSQSSTMTTDVPKGHLAV 120

Query: 135 YVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN 181
           YVGE+Q+ RFVI V++LN   FQDLLSQA EEF + HPMGGLT  CR+DIF ++IS L+
Sbjct: 121 YVGESQRNRFVISVSFLNHSSFQDLLSQAEEEFGFDHPMGGLTIPCREDIFIDLISQLS 179

[Close]

BLAST of Lsi11G011720 vs. NCBI nr
Match: KAA8546057.1 (hypothetical protein F0562_020492 [Nyssa sinensis])

HSP 1 Score: 187.6 bits (475), Expect = 9.7e-44
Identity = 95/196 (48.47%), Postives = 118/196 (60.20%), Query Frame = 0


Query: 15  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLL 74
           MG   PRIV  K  ++++        VPKGH AVYVGETEKKR +VP+ YL+HPSF +L+
Sbjct: 1   MGFHFPRIVRAKQIIQQVLSTPVATDVPKGHFAVYVGETEKKRIVVPISYLNHPSFQNLI 60

Query: 75  SQAEEEFGYDHPMGGLTFSCTEEIFF-----------------------------SHLAR 134
            QAEEEF +DHPMGG T  C EE F                              S +A 
Sbjct: 61  CQAEEEFEFDHPMGGRTIPCREETFIVLQKEIYPYNQMGIRMPRIIHTKKILRWPSLMAN 120

Query: 135 DRNQRGSAVIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTF 182
                 + V  GY  VYVGE++KKRFVIPV+YLNQP FQDLL++A EE+ + HPMGGLT 
Sbjct: 121 QAASTATDVPNGYFPVYVGESEKKRFVIPVSYLNQPSFQDLLTKAEEEYGFDHPMGGLTI 180

[Close]

BLAST of Lsi11G011720 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-22
Identity = 51/93 (54.84%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 15  MGIPLPRIV-IPKHFLRRIRQLSRTAIVPKGHLAVYVGE-TEKKRFLVPVEYLSHPSFHS 74
           M I + R++   K  L+ +   S    +PKGHLAVYVGE  +K+RF+VPV YLSHP F  
Sbjct: 1   MAIRISRVLQSSKQLLKSLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQK 60

Query: 75  LLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR 106
           LL +AEEEFG+DHPMGGLT  CTE+IF    +R
Sbjct: 61  LLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASR 93

[Close]

BLAST of Lsi11G011720 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.4 bits (254), Expect = 3.8e-22
Identity = 53/97 (54.64%), Postives = 66/97 (68.04%), Query Frame = 0


Query: 15  MGIPLPRIV-IPKHFLRRIRQLSRTAI-----VPKGHLAVYVGETEKKRFLVPVEYLSHP 74
           M I +PR++   K  LR+ + LS ++      VPKG+LAVYVGE   KRF+VPV YL  P
Sbjct: 1   MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 75  SFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR 106
           SF  LL +AEEEFG+DHPMGGLT  C+EEIF    +R
Sbjct: 61  SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Lsi11G011720 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 98.6 bits (244), Expect = 5.5e-21
Identity = 44/76 (57.89%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 30  RRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGG 89
           ++I   S  +  PKG LAVYVGE++KKR+LVP+ YLS PSF +LLS++EEEFG+DHPMGG
Sbjct: 11  KKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGG 70

Query: 90  LTFSCTEEIFFSHLAR 106
           LT  C E+ F +  +R
Sbjct: 71  LTIPCPEDTFINVTSR 86

[Close]

BLAST of Lsi11G011720 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20
Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 33  RQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTF 92
           R  +  +  PKG LAVYVGE++KKR+LVP+ YL+ PSF +LLS++EEEFG+DHPMGGLT 
Sbjct: 16  RSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTI 75

Query: 93  SCTEEIFFSHLAR 106
            C E+ F +  +R
Sbjct: 76  PCPEDTFINVTSR 88

[Close]

BLAST of Lsi11G011720 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-20
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 33  RQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTF 92
           R     +  PKG LAVYVGE++KKR+LVPV YL+ PSF +LLS++EEEFG+DHPMGGLT 
Sbjct: 16  RSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTI 75

Query: 93  SCTEEIFFSHLAR 106
            C E+ F +  +R
Sbjct: 76  PCPEDTFINVTSR 88

The following BLAST results are available for this feature:

BLAST of Lsi11G011720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33081	3.5e-20	67.65	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9FJF9	7.8e-20	57.89	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
P32295	1.3e-19	63.29	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
Q9FJG0	1.7e-19	57.53	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
P33082	2.3e-19	64.71	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Lsi11G011720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C452	4.4e-50	63.79	indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN...	[more]
A0A5N5LHL4	2.0e-47	54.84	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_014495 PE=3 SV=1	[more]
A0A6N2L447	4.5e-47	55.56	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS179154 PE=3 SV=...	[more]
A0A5C7IEC7	7.8e-47	59.04	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008620 PE=3 SV=1	[more]
A0A5C7IDG9	9.5e-45	55.31	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008618 PE=3 SV=1	[more]

BLAST of Lsi11G011720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135927.1	9.1e-50	63.79	indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]	[more]
KAB5541521.1	4.2e-47	54.84	hypothetical protein DKX38_014495 [Salix brachista]	[more]
TXG67345.1	1.6e-46	59.04	hypothetical protein EZV62_008620 [Acer yangbiense]	[more]
TXG67343.1	2.0e-44	55.31	hypothetical protein EZV62_008618 [Acer yangbiense]	[more]
KAA8546057.1	9.7e-44	48.47	hypothetical protein F0562_020492 [Nyssa sinensis]	[more]

BLAST of Lsi11G011720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21210.1	1.3e-22	54.84	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	3.8e-22	54.64	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	5.5e-21	57.89	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	1.2e-20	57.53	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.1e-20	58.90	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 36..101 e-value: 2.1E-21 score: 75.9 coord: 108..178 e-value: 6.6E-19 score: 67.9
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 114..180
None	No IPR available	PANTHER	PTHR31929:SF80	SUBFAMILY NOT NAMED	coord: 114..180
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 30..100
None	No IPR available	PANTHER	PTHR31929:SF80	SUBFAMILY NOT NAMED	coord: 30..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G011720.1	Lsi11G011720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin