Lsi11G011580 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G011580
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	auxin-induced protein 15A-like
Location	chr11: 20137523 .. 20140640 (-)
RNA-Seq Expression	Lsi11G011580
Synteny	Lsi11G011580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTTCGCTTGCCTAGTATCATTCATGCTAAGCAAAGTTTTCGGCGATCTTCGTCAACAGGAAATGGAGCATCTCCAAAAGCTTTAGATGTTCCAAAGGGCTACTTTACTGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCACTATCTTGCTTGAACCAACCCTTATTTCAAGATTTATTGAGTCAATCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGAAACTTTTCTCAGTCTCACAAAGCTGAACAACTCATTAACCAGAAGGATCAATTTAGAAAACTAGGCAGCACAGAAAAAGGATTAGAATAGCACAGAATGTAAACTATAACATATATACATATTTTTTTAATGAAATAGCTTGATTCTTTAAATTGAAACAGTGTTGTACAGTGTTCATAATTCTTTTTATCTTTCTCTTCTCCTCCACATTTGCTGCTTAGCGTTATGCAGTTCAAGATCAGTAAAGAGACCTCTTAATTTTTCTTCACAAGAAATCGAGTAGTACTCGTCATTCGACACAACGTTTTAAGCTAACTCATTAATTTTTACTTGAATTTTTAATCAAACGATGATGAAAAACATTGTGATTTCCATGTAACTAACTGTTTTAAGATCCTTAAGATGTTTTACACAAGATCTAAGCAAGGTGAGTATCAAATTAAGAGTCTTTTAGTTGAAGGTCAGTATGAAATTGGAACATTAATTAGATGATGAGACTAATTACTGTGGTTAACAAAGTTCTGAGGATGTCTTATCAAGAAGCTGGATTGATATTAGATTATGCACTTGATTCAAGTGAGGTTAATACTCAGAAACATACCATAGATTATGTGGGATCCATCTAGAATATTTCACCAAGCAATGTGTAGATTGTACACCTACCAATGAGAACCATATTAATGATAATAAGTTAGAAAGCAAAACCATGTGATATCCATAAATGACTCTAATGCACTGTCCTATCTTTTCCCTAGCTTTATTTGAAAATGGGGTTCTCATTCTGGAATGGTTGTGAACATTATGCATCTCAAAAACGAAGAAGAAGACAAAGAGGAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGAAGAAGAAGACAAAGAAAAAAAAAAAAAAAAAAAAAAGGAAGAAAAAGGTAGTCACAATCACTACTAATCTCTATTAATCAGCTTGAAGGTACAGAGAAAATTGGATTGTATACCCACTTTTGAAAGATTCACAAAGAAAGTGATTCCAAGATCCATTTGACTATTTTCTTTTTCTTCTTTTAAAAAAGGAAATATGACTTTTCATTGATAAAATGAAAAGAGACTAATGCTCAAAGATACAGTAACCTTTAAAAGATAGAGAAATTGCAATAAAAAGAAAGAAGAAAAAAAACTTGGGATACAAAGAGGAGAAGACATCAAAAAGCAAATTCTTAAAATCTATTTGACTACTTAAATCCCAAGTTCGAACCTTCAGATGAGCTTAATACTAGTAATTGGATGGGTTTGAATTCTAATGTAATCCAAAATTCATATTTGAATTGAACGTTTTATACTGGATTTGTAATACTGAACTCATTCTGTTCTCACAATTTTCAATCCGACCCTCTTTCTTACCGTTTTCATGCTTCATGATCTCATTTTCGTTCCGTCATTAATTCCTCACACATCCCAACACTCCTCAGATTCTCAGTAATCTAGTTACATTCTAACCCCCCAAACAACCCCTTATTGTCTCCTAGGTTCGGACCTTGGAGCAGTAGTGGGTGCCCCAAGTATAAAATACGTTGAGTTCACCATTATTTGTAAAAACTCACTGAATGAGATTAAACATCAATAGCTTTTAGTGCTAACAAAACGCTGCCTCCATTTCCTCTTCTTTTTCTCTTAATGTTTTAAATGTTTTTCTTTTTTTAAACAAGAAACAACTTTTTGTTAATAGAGGGAAAGGAAATTGTTCAACGATAGAAGCTCCCAAAAGAGAACAAAAAAGAAAACAAGAGAAAACATGGAAGAAACAGAAACAAGAACAAAGTTCAAAATAACAAAACTAAAGGCCTTTCAATTTGAAGTGGTCTTGCTATCATCAAGAGAGAAGCAGGAAGGGTCTTTCAAGACTTCTGCAAGAAGCTTGCTTCTGAATTCCTCTATAAGGGTTGAACGAGCTTCAATTAACTTCATCTTATATTGAAGATGGATCTCTAGAGTCCTTTTAGAGTAAGACTCTTTACAAAGGATCTTTTCTCGTTGCGGAGAGAAACCAACTCCGCGTCAAGCTGATCAATCAAACAGCTTTAGACTCCATAATATAACCATAGAAAAGTTGATGCAGGAAGGAAGCTTGCTGAGCCAATGTTTTGAAAGCAATGATCCTCAACCAGCTGAAAAATTAGGTTCAGTCCTTTGTTAAAAAAAAAAAAAAAAAAACCCAAATCTTTCATTTATGATAAAGAAACTAATACCTTGAGGTTATTCATCAACAACTTGTGTGAAAGTTGTTTGACTTTCCTCTGGCTACTTGACACAAATAACTAAATGGTTTCCTTTAAAGAAAGAAAAAAAGATAATTTCATTGATGAAATGAAATTACAAAAAGAGGGGGGAGGAAAGCCAAAAACCCCAAGCCAAGGAAATTACAAAAAGGTCTTCCAATTGGCACAAAGATAAAATAGAATAAGTGTTGAAAGGAGCATAATATTTACACCATGAGAGAGCAACCAAAAATATATGATCCATGAAGCTTCCTTCATGCATAGTTCAATTATCAAAAAAATTTCCAACTTTTGAACCTTTTAGAATCTCATACTGCTTAAGAAATACCATATCACAATGGGTTTCCATTTGCCTAGTATTGTTTATGCTAAGCAAAGTCTTCAACGATCTACATTAACAGGAAATGGGGCATCTTCAAAAGCGGTAGCTGTTCCAAAAGGCTACTTCACAGTTTATATTGACAAGGAACAAAAGATGCATTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCATTTCCAGACTTGTAG

mRNA sequence

ATGGGTTTTCGCTTGCCTAGTATCATTCATGCTAAGCAAAGTTTTCGGCGATCTTCGTCAACAGGAAATGGAGCATCTCCAAAAGCTTTAGATGTTCCAAAGGGCTACTTTACTGTTTATGTTGGTGAGAATCTCATACTGCTTAAGAAATACCATATCACAATGGGTTTCCATTTGCCTAGTATTGTTTATGCTAAGCAAAGTCTTCAACGATCTACATTAACAGGAAATGGGGCATCTTCAAAAGCGGTAGCTGTTCCAAAAGGCTACTTCACAGTTTATATTGACAAGGAACAAAAGATGCATTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCATTTCCAGACTTGTAG

Coding sequence (CDS)

ATGGGTTTTCGCTTGCCTAGTATCATTCATGCTAAGCAAAGTTTTCGGCGATCTTCGTCAACAGGAAATGGAGCATCTCCAAAAGCTTTAGATGTTCCAAAGGGCTACTTTACTGTTTATGTTGGTGAGAATCTCATACTGCTTAAGAAATACCATATCACAATGGGTTTCCATTTGCCTAGTATTGTTTATGCTAAGCAAAGTCTTCAACGATCTACATTAACAGGAAATGGGGCATCTTCAAAAGCGGTAGCTGTTCCAAAAGGCTACTTCACAGTTTATATTGACAAGGAACAAAAGATGCATTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCATTTCCAGACTTGTAG

Protein sequence

MGFRLPSIIHAKQSFRRSSSTGNGASPKALDVPKGYFTVYVGENLILLKKYHITMGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL

Homology

[Close]

BLAST of Lsi11G011580 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.2e-09
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP I       +++++  N ASSK+V VPKGY  VY+  + +  F+IP+SYLNQPS
Sbjct: 1   MGFRLPGI-------RKTSIAANQASSKSVEVPKGYLVVYVGDKMR-RFLIPVSYLNQPS 56

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 56

[Close]

BLAST of Lsi11G011580 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.6e-08
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP I       ++++ + N ASSKAV V KGY  VY+  E+   FVIP+SYLN+PS
Sbjct: 1   MGFRLPGI-------RKASFSANQASSKAVDVEKGYLAVYVG-EKMRRFVIPVSYLNKPS 56

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 56

[Close]

BLAST of Lsi11G011580 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.4e-07
Identity = 33/65 (50.77%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 55  MGFHLPSIVYAKQSLQRSTLTG-NGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQP 114
           MGF LP I        R TL+  N ASSK +  PKGY  VY+ +  K  FVIP+S+LNQP
Sbjct: 1   MGFRLPGI--------RKTLSARNEASSKVLDAPKGYLAVYVGENMK-RFVIPVSHLNQP 56

Query: 115 SFPDL 119
            F DL
Sbjct: 61  LFQDL 56

[Close]

BLAST of Lsi11G011580 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.1e-06
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST  G+       A PKG+  VY+ + QK  +++PLSYL+QPSF  L
Sbjct: 6   SLLGAKKILSRSTAAGS-------AAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQAL 56

[Close]

BLAST of Lsi11G011580 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.0e-06
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST       + A A PKG+  VY+ + QK  +++P+SYLNQPSF  L
Sbjct: 6   SLLGAKKILSRST-------TAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQAL 56

[Close]

BLAST of Lsi11G011580 vs. ExPASy TrEMBL
Match: A0A4Y1RZK4 (SAUR-like auxin-responsive protein family (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_021740 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.8e-20
Identity = 65/162 (40.12%), Postives = 80/162 (49.38%), Query Frame = 0


Query: 1   MGFRLPSIIHAKQSFRRSSSTGNGASPKALDVPKGYFTVYVGEN---------------- 60
           MGFRLP I++AK+S  RS ST N  +    D+PKGYF VYVGE+                
Sbjct: 5   MGFRLPGIVNAKRSLIRSRSTSNRTAESKTDIPKGYFAVYVGESQKKRFVIPVSYLNETL 64

Query: 61  -LILLKKYH---------------------------ITMGFHLPSIVYAKQSLQRSTLTG 119
            L LL +                             +TMGF LP IV AK+SL RS  T 
Sbjct: 65  FLELLSQAEEEFGYNHPMGGITIPCSESTFLGLTSSLTMGFRLPGIVNAKRSLIRSRSTS 124

[Close]

BLAST of Lsi11G011580 vs. ExPASy TrEMBL
Match: A0A6P5RB09 (uncharacterized protein LOC110746202 OS=Prunus avium OX=42229 GN=LOC110746202 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.8e-19
Identity = 66/159 (41.51%), Postives = 80/159 (50.31%), Query Frame = 0


Query: 1   MGFRLPSIIHAKQSFRRSSSTGNGASPKALDVPKGYFTVYVGEN---------------- 60
           MGFRLP I+HAK+         N A  K+LDVPKGYF VYVGE+                
Sbjct: 1   MGFRLPGIVHAKK---------NQAPSKSLDVPKGYFAVYVGESKKKRFVIPVSYLNQSS 60

Query: 61  -------------------------LILLKKYHITMGFHLPSIVYAKQSLQRSTLTGNGA 119
                                    L+LL +   TMGF LP IV+AK+         N A
Sbjct: 61  FQDLLSLAEEEFGYDHPMGGITIPFLVLLFRNFKTMGFRLPGIVHAKK---------NKA 120

[Close]

BLAST of Lsi11G011580 vs. ExPASy TrEMBL
Match: A0A6J1C3L5 (indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN=LOC111007632 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.8e-19
Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LPSIV+AKQSL+RST TGNGAS KAV +PKGYFTVYI +EQK  FVIPLSYLNQP 
Sbjct: 1   MGFRLPSIVHAKQSLRRSTSTGNGASPKAVDIPKGYFTVYIGEEQKKRFVIPLSYLNQPL 60

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 64

[Close]

BLAST of Lsi11G011580 vs. ExPASy TrEMBL
Match: A0A5J5BTQ5 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020493 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.7e-18
Identity = 65/145 (44.83%), Postives = 79/145 (54.48%), Query Frame = 0


Query: 1   MGFRLP-SIIHAKQSFRRSSSTGNGASPKALDVPKGYFTVYVGE---------------- 60
           MGF  P +I+ AKQ  +   ST     P A DVPKG+F VYVGE                
Sbjct: 1   MGFHFPRNIVRAKQIIQLVFST-----PVATDVPKGHFAVYVGEAEKKRFVVPISYLKHP 60

Query: 61  ---NLI------LLKKY-HITMGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTV 119
              NL+        KKY HI MG   P I++ K+ L R +L  N A+S A  VPKGYF V
Sbjct: 61  SFQNLLCQAEEEFRKKYIHIKMGIRRPRIIHTKKVLGRPSLMANQAASTATDVPKGYFAV 120

[Close]

BLAST of Lsi11G011580 vs. ExPASy TrEMBL
Match: A0A6J1JPE8 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111486306 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.2e-18
Identity = 51/74 (68.92%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 45  LILLKKYHITMGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFV 104
           LI L   +  MGF LP IV+A+QSLQRS+ TGNGAS KAV VPKGYFTVY+ + +K  FV
Sbjct: 19  LIFLFGTYYNMGFRLPRIVHARQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVEKQRFV 78

Query: 105 IPLSYLNQPSFPDL 119
           IPLSYLNQPSF DL
Sbjct: 79  IPLSYLNQPSFQDL 92

[Close]

BLAST of Lsi11G011580 vs. NCBI nr
Match: BBH09288.1 (SAUR-like auxin-responsive protein family, partial [Prunus dulcis])

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-19
Identity = 65/162 (40.12%), Postives = 80/162 (49.38%), Query Frame = 0


Query: 1   MGFRLPSIIHAKQSFRRSSSTGNGASPKALDVPKGYFTVYVGEN---------------- 60
           MGFRLP I++AK+S  RS ST N  +    D+PKGYF VYVGE+                
Sbjct: 5   MGFRLPGIVNAKRSLIRSRSTSNRTAESKTDIPKGYFAVYVGESQKKRFVIPVSYLNETL 64

Query: 61  -LILLKKYH---------------------------ITMGFHLPSIVYAKQSLQRSTLTG 119
            L LL +                             +TMGF LP IV AK+SL RS  T 
Sbjct: 65  FLELLSQAEEEFGYNHPMGGITIPCSESTFLGLTSSLTMGFRLPGIVNAKRSLIRSRSTS 124

[Close]

BLAST of Lsi11G011580 vs. NCBI nr
Match: XP_022135742.1 (indole-3-acetic acid-induced protein ARG7-like [Momordica charantia])

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-18
Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LPSIV+AKQSL+RST TGNGAS KAV +PKGYFTVYI +EQK  FVIPLSYLNQP 
Sbjct: 1   MGFRLPSIVHAKQSLRRSTSTGNGASPKAVDIPKGYFTVYIGEEQKKRFVIPLSYLNQPL 60

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 64

[Close]

BLAST of Lsi11G011580 vs. NCBI nr
Match: XP_021802105.1 (uncharacterized protein LOC110746202 [Prunus avium])

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-18
Identity = 66/159 (41.51%), Postives = 80/159 (50.31%), Query Frame = 0


Query: 1   MGFRLPSIIHAKQSFRRSSSTGNGASPKALDVPKGYFTVYVGEN---------------- 60
           MGFRLP I+HAK+         N A  K+LDVPKGYF VYVGE+                
Sbjct: 1   MGFRLPGIVHAKK---------NQAPSKSLDVPKGYFAVYVGESKKKRFVIPVSYLNQSS 60

Query: 61  -------------------------LILLKKYHITMGFHLPSIVYAKQSLQRSTLTGNGA 119
                                    L+LL +   TMGF LP IV+AK+         N A
Sbjct: 61  FQDLLSLAEEEFGYDHPMGGITIPFLVLLFRNFKTMGFRLPGIVHAKK---------NKA 120

[Close]

BLAST of Lsi11G011580 vs. NCBI nr
Match: XP_038887900.1 (auxin-induced protein X10A-like [Benincasa hispida])

HSP 1 Score: 102.4 bits (254), Expect = 2.7e-18
Identity = 51/64 (79.69%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP IV AKQSLQRS+ TGNGAS KAV VPKGYFTVY+ +EQK  FVIPLSYLNQPS
Sbjct: 40  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 99

Query: 115 FPDL 119
           F DL
Sbjct: 100 FQDL 103

[Close]

BLAST of Lsi11G011580 vs. NCBI nr
Match: XP_038887254.1 (auxin-induced protein 15A-like [Benincasa hispida])

HSP 1 Score: 102.4 bits (254), Expect = 2.7e-18
Identity = 51/64 (79.69%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP IV AKQSLQRS+ TGNGAS KAV VPKGYFTVY+ +EQK  FVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 64

[Close]

BLAST of Lsi11G011580 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 59.7 bits (143), Expect = 1.8e-09
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 0


Query: 55  MGFHLPSIVY-AKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQP 114
           M   +P ++  +KQ L+++ L  + +SS ++ VPKGY  VY+ ++    FV+P+SYL+QP
Sbjct: 1   MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 115 SFPDL 119
           SF DL
Sbjct: 61  SFQDL 65

[Close]

BLAST of Lsi11G011580 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 52.4 bits (124), Expect = 2.9e-07
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST  G+       A PKG+  VY+ + QK  +++PLSYL+QPSF  L
Sbjct: 6   SLLGAKKILSRSTAAGS-------AAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQAL 56

[Close]

BLAST of Lsi11G011580 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 51.6 bits (122), Expect = 5.0e-07
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST       + A A PKG+  VY+ + QK  +++P+SYLNQPSF  L
Sbjct: 6   SLLGAKKILSRST-------TAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQAL 56

[Close]

BLAST of Lsi11G011580 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 51.6 bits (122), Expect = 5.0e-07
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST    GA S   A PKG+  VY+ + QK  +++P+SYLNQPSF  L
Sbjct: 6   SLLGAKKILSRST----GAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQAL 56

[Close]

BLAST of Lsi11G011580 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 50.8 bits (120), Expect = 8.5e-07
Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST       +   A PKG+  VY+ + QK  +++PLSYLNQPSF  L
Sbjct: 6   SLLGAKKILSRST-------AAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQAL 56

The following BLAST results are available for this feature:

BLAST of Lsi11G011580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33080	5.2e-09	50.00	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33083	2.6e-08	51.56	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
P32295	6.4e-07	50.77	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
Q9FJG1	4.1e-06	44.83	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJG0	7.0e-06	44.83	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]

BLAST of Lsi11G011580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4Y1RZK4	6.8e-20	40.12	SAUR-like auxin-responsive protein family (Fragment) OS=Prunus dulcis OX=3755 GN...	[more]
A0A6P5RB09	5.8e-19	41.51	uncharacterized protein LOC110746202 OS=Prunus avium OX=42229 GN=LOC110746202 PE...	[more]
A0A6J1C3L5	5.8e-19	79.69	indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN...	[more]
A0A5J5BTQ5	1.7e-18	44.83	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020493 PE=3 SV=1	[more]
A0A6J1JPE8	2.2e-18	68.92	auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111486306 PE=3 ...	[more]

BLAST of Lsi11G011580 vs. NCBI nr


Match Name	E-value	Identity	Description
BBH09288.1	1.4e-19	40.12	SAUR-like auxin-responsive protein family, partial [Prunus dulcis]	[more]
XP_022135742.1	1.2e-18	79.69	indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]	[more]
XP_021802105.1	1.2e-18	41.51	uncharacterized protein LOC110746202 [Prunus avium]	[more]
XP_038887900.1	2.7e-18	79.69	auxin-induced protein X10A-like [Benincasa hispida]	[more]
XP_038887254.1	2.7e-18	79.69	auxin-induced protein 15A-like [Benincasa hispida]	[more]

BLAST of Lsi11G011580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	1.8e-09	41.54	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	2.9e-07	44.83	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	5.0e-07	44.83	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	5.0e-07	48.28	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	8.5e-07	44.83	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 73..118 e-value: 9.1E-7 score: 29.0
None	No IPR available	PANTHER	PTHR31929:SF69	SUBFAMILY NOT NAMED	coord: 11..45
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 11..45
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 64..118
None	No IPR available	PANTHER	PTHR31929:SF69	SUBFAMILY NOT NAMED	coord: 64..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G011580.1	Lsi11G011580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin