
Lsi11G011530 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGAACCTCCAAATTCCTAGGGCTTCTCTCTTCTCTAAATCGGCTTCTTCTTCAACCAAACTCTTTCTTCTTTTCTATTTTCCTTTGCAAAATCCTTTGATGGCGCTTCCTCCAGGGCCCTATTCCGGAACCAGCACCCTCGCTTTAGTATGTTTTTCTTTCTTTCCCATCTTTTCCTTGAGAATTTGGGTCTGGAGATTCGGTAGAACATTTCATGTTGAATTTGCTATTTCCGTATCTGATTTTGGATTCAATAATGGAAATTAATGTTCATATTCAACGGTCTTGATCCTTGGCAGGTTGCTCGTGCTTCGGCGTTCTCTTTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGTTCGTTGATTTGGGATTCCGTTGTTAGTGTCTCTAAATTATCATTTCTGATTGTTCATTCCTGCCATGAGTGTCGTAGTGCTATCTGCTATGTATTGTCACAGTCTAGATGTAGGATATATTTTTAGAGCCTAATGTAAATTTTAATCTGAATGGTTTTTTTTTTCATGGTTAAGTTATTCAAAATGCCCATTTGAGATTAGTTTTGATTATACTCTTATTGTTGAAGAAGTTTCACTTCTACCCTTAACCTTTAAATTGATCCAAATATGCCCTTGAAGAATTTTATCTTTAATACGAGTTATGGAAATTATGTGGCTGCTTAGTTGTAAGTGTACAGTGGAAGACATTGCTTTTCTAAAATGAAAGGCAAAGATGACCAGGACTGATAACCCCTTGAGTAATCACTAATATGGGGTGAAATGAAAGATGAAAAGCCAAATTTGTTTGAAAAGTGATGGCCTTGTTCTCGTATCCTTTTTAAATAGACATATCTGTCAGTGCTCTATCTACAACTCAGCAGTCATGGCAATTACATTACAACGGTTAAATTCTTCGGGAGCATTTTTTAATCAATTTTATAGGTCAAGAATGGAAACAAAAGATTTTAAATGATAAGGGTGTATTTAAAATTGAAACTAATCAAAATTCATGGACATTTTTGGATAATTTAACCTTTTTCCAAACAAGAAAGTAGAGTAGAAACTAGAAAGTAAGGCGAGAGGATCTCCTACAGAGTGATGGGAGTTATAAAATGAAGATGAACCATCCAGTTGACTTGAATATCAAAAAAGGGACAATTGCATAGCTTCTTAGAAAAGAGTATACTGTCCAAAAACCAAAAGGTAATGCCATCAACCATCTCTGGTAGATTTGACAAGTTATATCTTCAACAAATCGCTGAATTCTTTCCTCCTCCATCAAGATGCCCCAAACCAAAGCACCACTTGCTTATGTTTATGAAACCCATACCTTGAAAACAGAAGTTCCACCCAGTAGAAACAGAAGTGCGTGATGGAAAAAGGTGGTCTAAATTCTAGATCTCTTTTTGATGAAGAAGGCACCAAGAAGGTGGTAAAGATAAGGTTGGATTTTTTTTAATCTTTCTTGTATTTTATTCCAACTCCCGAGTCTGTGCCTTACTATGGAAGGAGAGTCCCAAAGAAAGAAAAAAGCGTCTAATTATCTCATGGATCCTCCACTTCTATTTCAAGTGCCTGATAAATATAGTTATATATATATATATATATAAAAGAAATCTAGTCTTCAACCTTCTTGAAATTTATGGAAGAAAAAATTTCTGATCTAGAATACTGAATCCATAAAAATTAGGATTTTCATTGTCGTAACTATTATGTATGATGCAATTGATGTGTTTTCTGATTGCAATATTTGTTTTGTTGTTTATTCTGATTATTTTGTAACTGATTATCATTAATTTATCATTTTGAAATTTAAATTTTGAACATTTTTTCTTGAAGCAACTATTTATGTTTTACATCATAGTTGTTAAATATATTAAATTAGATTGATTGGTCTAAATGTCTAATGCCGTGAAAGGATTAATTGTTTTTAATGGGCTGTCAAATTTCTTTGAACTTGACGGTTCAGTTGAGTTGGATTGAAAATGATATTGGAAGGAAACTATTTCCAAAGTTAAAACATAGTGTTTGGTTTTTGAATTATGGTAAATATGCTTGGTGTTGGACTTTATTTATTAACTTCCATTAATATACTCAATGACGACCAATGATTTATTCTCCTATTTCTATTGACATTCCTGTTCAATTTCAGTTTAACTTATAGGCATTGTGATTTAAAAATCTCATGTTATTTCTAGCTGTCTTTTGAGGCCATTCTTAATGCTCCTGTCTGATTTTAGAATTATACTTCAATTCCTATTTTATCACTACAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTGATTCCGGTCAGCGTCAAAACTGAGGCACCGGTTGAATTTCAAAGGGAAATAATTACATGGTAGTTGGTCACGATCTATTTTTCTTTAATACTTTTTTGTTCCATGTTCCATTGGATGGCTCTATATTTCATTGAAGAGTCATGTAGATGTATCTTACCTCGGTCTTAAGGACTATATTTGAGTTACATTTAGTTTTGATGCATGGATGAGAGGACTAACAGATCATGATTCCTTTATTTGATTGAAATGAATAATTTGCTTCTCATCTTTCTTAGTGCAGGTGTTGTGTTAATTCATTAATCTTTATCCGTCTTTATGTTATGGTCATGTGATATAAGGCTATTGGTCATCCATATTGTCAAGGATGAATCATTGTAATTAATTTCAAGAAAAGATCGTTTGTAACAATCATTAAGAAAAATTTAGCTGCTTCCAAATAAAATATTGGAATTTGTTGTTGATTTTGTTTTTGTTCTAAAAACAAAACAATAGCTTAAAAAAAACCGATGTGCCATCATGAGTTAGTCCTCTGGGGCACGTCAAAAAACAA TCGAACCTCCAAATTCCTAGGGCTTCTCTCTTCTCTAAATCGGCTTCTTCTTCAACCAAACTCTTTCTTCTTTTCTATTTTCCTTTGCAAAATCCTTTGATGGCGCTTCCTCCAGGGCCCTATTCCGGAACCAGCACCCTCGCTTTAGTTGCTCGTGCTTCGGCGTTCTCTTTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGAAACAGAAGTGCGTGATGGAAAAAGGTGGTCTAAATTCTAGATCTCTTTTTGATGAAGAAGGCACCAAGAAGGTGGTAAAGATAAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTGATTCCGGTCAGCGTCAAAACTGAGGCACCGGTTGAATTTCAAAGGGAAATAATTACATGGTAGTTGGTCACGATCTATTTTTCTTTAATACTTTTTTGTTCCATGTTCCATTGGATGGCTCTATATTTCATTGAAGAGTCATGTAGATGTATCTTACCTCGGTCTTAAGGACTATATTTGAGTTACATTTAGTTTTGATGCATGGATGAGAGGACTAACAGATCATGATTCCTTTATTTGATTGAAATGAATAATTTGCTTCTCATCTTTCTTAGTGCAGGTGTTGTGTTAATTCATTAATCTTTATCCGTCTTTATGTTATGGTCATGTGATATAAGGCTATTGGTCATCCATATTGTCAAGGATGAATCATTGTAATTAATTTCAAGAAAAGATCGTTTGTAACAATCATTAAGAAAAATTTAGCTGCTTCCAAATAAAATATTGGAATTTGTTGTTGATTTTGTTTTTGTTCTAAAAACAAAACAATAGCTTAAAAAAAACCGATGTGCCATCATGAGTTAGTCCTCTGGGGCACGTCAAAAAACAA TCGAACCTCCAAATTCCTAGGGCTTCTCTCTTCTCTAAATCGGCTTCTTCTTCAACCAAACTCTTTCTTCTTTTCTATTTTCCTTTGCAAAATCCTTTGATGGCGCTTCCTCCAGGGCCCTATTCCGGAACCAGCACCCTCGCTTTAGTTGCTCGTGCTTCGGCGTTCTCTTTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGAAACAGAAGTGCGTGATGGAAAAAGGTGGTCTAAATTCTAGATCTCTTTTTGATGAAGAAGGCACCAAGAAGGTGGTAAAGATAAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTGATTCCGGTCAGCGTCAAAACTGAGGCACCGGTTGAATTTCAAAGGGAAATAATTACATGGTAG SNLQIPRASLFSKSASSSTKLFLLFYFPLQNPLMALPPGPYSGTSTLALVARASAFSFGLVYGSLKLKYLQKQKCVMEKGGLNSRSLFDEEGTKKVVKIRRRQNLTRKLKQRLITEVWLIPVSVKTEAPVEFQREIITW Homology
BLAST of Lsi11G011530 vs. ExPASy TrEMBL
Match: A0A0B0PCA2 (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_09277 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.0e-11 Identity = 49/87 (56.32%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of Lsi11G011530 vs. ExPASy TrEMBL
Match: A0A6J1C358 (ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008022 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.4e-10 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0
BLAST of Lsi11G011530 vs. ExPASy TrEMBL
Match: M5W7C9 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015587mg PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.4e-10 Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = 0
BLAST of Lsi11G011530 vs. ExPASy TrEMBL
Match: A0A540L7S8 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_031905 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 5.8e-10 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of Lsi11G011530 vs. ExPASy TrEMBL
Match: A0A0A0K2E7 (ATP synthase subunit e, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_7G007920 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 9.8e-10 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0
BLAST of Lsi11G011530 vs. NCBI nr
Match: KHG22467.1 (hypothetical protein F383_09277 [Gossypium arboreum]) HSP 1 Score: 79.7 bits (195), Expect = 2.2e-11 Identity = 49/87 (56.32%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of Lsi11G011530 vs. NCBI nr
Match: KAG5547810.1 (hypothetical protein RHGRI_013483 [Rhododendron griersonianum]) HSP 1 Score: 78.6 bits (192), Expect = 4.8e-11 Identity = 52/87 (59.77%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of Lsi11G011530 vs. NCBI nr
Match: KAF7143520.1 (hypothetical protein RHSIM_Rhsim05G0067400 [Rhododendron simsii]) HSP 1 Score: 77.8 bits (190), Expect = 8.2e-11 Identity = 49/80 (61.25%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Lsi11G011530 vs. NCBI nr
Match: XP_022136306.1 (uncharacterized protein LOC111008022 [Momordica charantia]) HSP 1 Score: 74.3 bits (181), Expect = 9.1e-10 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0
BLAST of Lsi11G011530 vs. NCBI nr
Match: TQD82524.1 (hypothetical protein C1H46_031905 [Malus baccata]) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-09 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of Lsi11G011530 vs. TAIR 10
Match: AT3G01130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 2.8e-09 Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 0
BLAST of Lsi11G011530 vs. TAIR 10
Match: AT5G15320.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 3.7e-09 Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0
BLAST of Lsi11G011530 vs. TAIR 10
Match: AT3G01130.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.2 bits (139), Expect = 6.3e-09 Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0
BLAST of Lsi11G011530 vs. TAIR 10
Match: AT5G15320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 1.4e-08 Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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