
Lsi11G011440 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATAACTCTGAACAATGGCTTCAAGATGCCGCAAATTGGGTTAGGAGTTTGGCGTATGGAGAAGCAACAAATTAGAGACCTCATTATCAACGCCATTAAGATTGGTTATCGACATTTTGACTGCGCCAGTACCGCCTCGTCGCCTTCAACTGTTTTCTTCTTCATTTCAAACTTTCTCGTTTAATTTCTTCAATTAGACTGTATTTATTTGTTTTCGTTTTCCTTAAAAATCGGGAACGAAATCGTGGAAGATCTATGATTCTAGGTCGGATTTTGATCATCATTTTTTTTTTTTTTTTTTTGAGTTCGATTAGGAGTGATTGCGTGTGAAAATGTTTGATGTTGGAGGAAATATCATTGCATAGACTTAAACACATAACTTCCCTGGACTATTTACCCTGATATCATCTTAAATCGCTGATTGAGCCTAGAGAAAGACAAATTTAATTATATCATCTAACAAAGAGTACTTACAGACAGTTAACTTTAATTTCTATCTTAATTCTTTTGACCTCGTTTAGTAACTATATAGTTTTTGGTTTTTGAAAATTAAGCTTATAAATCACCCCTCCTACCTCTAAATTTATTACTTTATTATCTAAGTTAAATTTTGAAAACTAAAAAAATAGTATTTCTTTCTTGAAAACTAAATTTATTTCTTGCAGCTGATTACAAAAATGAAGCTGAAGTTGGCGAGGCATTAGCAGAAGCTTTTAAGAGTGGACTTGTCAAGAGGGAAGAACTTTTCATTACCACAAAAGTCAGTTTGATTTTGAATTCTAATTTGTCTGTATTTGAATCCTTGAAGTTCAAATAGTTAGGAGCTTAAGGATGAGTTTGGTATGATTTGCTTTTTTTTTTTTTTAATTTTTTTTAAGTATAATAATTTCGGGCACGAAAATTTGAACCACTAACATCGTAGTTACTAGTACACTCGAATACCAGTTGAGCTAAGCTCTTGTTAGTATGATTTGCTTTTAGCCAATTATATTTTCATGACAGATAGTGATTGAAATTTTTTAAAAATGGTGTTTGTGATAAGGAGTGGAATAGTGAAGAGTAAAGAGTTATGAAATCTATGGAGTTGTGAACTCTGAGAGCCCATAGTGTAAGGAGTTGATAAGATATAAAATTGATGTTCTTTTGGTAGTGGGACCCAATAAACTCTTTGAGCAAAACAAAGAGTGAAATTCACAAGCTCCTACTTTCCTATTCCTACTTCCCAACTCTCTGGGTCAACACACACCCTAAAAGAAATATTTAGATCAATTTGGTAAGTATTTGATTTTTAAAAATTAAGCCGATTTTCTATCAATTTCTTACGCTGATTTTCATATTTTTTTTTAACTAAAAGAGTTGAATTCTTAGCTAAATTCCAAAACAAGAACAAGTTTATAAAAACTGCTTTTTTTTTTTTTTTTTTTTTTTATTTTTCAAAAATTGTCTTGGTTTTTGAAAACATTGGTAGAAAGTAGATAACAAAACAAGGAATTTAGTGGGGAAAAAAAGAGTTTATAGGCTTAATTTTCAAAAACTAAAAACCAAAAATCAAATAGTTACAATCAAAGCCTTAATTAGAGTTTTTAAGCAAAGTAATCACAAAGTTAAGTTTAAAAGGCAGTTACAAATATAGCAATCAGACCAAAATTAAGTATTAACAGATATAGTACAATGCGAAAAAAAATTGCAGTTATAAAAAAGTTTAGATCTAGCTCTTGGAGTCTATCAATGATAGACTATATCGCTGATAGATTTTGTTATATTTGTAATGCTTTAAAAATATTGTTATACACTTAGACCCTATTTGGTAACCATTTCGTTTTTCATTTTTAGTTTTTGAAAATTAAACCTATTTCCTTTAAATTTTTTTATCATAGTTTGTATCAATCTTAAGTAGAAGAGTTACATTTTCAGTCAAAAAGTTTAAAAATAAAAACAAGTATTTAAAAACTATTTTTTTAGTTCTTAAATTTTGACTTGTTTTTGAAAACACGAGTAAAAAAAATAGATATCAAAATAAGAGATTTATTTAGAGGTAAAAAAGATGTTTATAGCCTTAATTTTTAAAAGCAAAAAACAAACGAGACCTTAATTATTAATTCCATTACAATCACCCTATGTTTAAATCAGTGTGTTGGCTTTCATGACAATGCCAGCTCTGGAATTCTGACCATGGACATGTTCTTGGGGCTTGCAAGGACAGCTTAAAAAAGCTTCAACTACAATATTTGGATCTTTACTTGGTGCACTTCCCAATAGCCATAAAGCATACAGGTTTTTTTTTTCTTTCTTTTTTTTTTAATTTATATTTATTTAATTCAACATTTTTATTCTAACTAACTTAAAATATTATAAATTTAGTACTTATCATTTAAAAATTTTCAATCTTCATAAATAGTTTTTACCGTAAAGATATTTTATAAAGATTTTATTAAACTATAGAGAATAAATTTTAATTTTTAAAATCATAAGAATTAAATTCTAATTTTTCTAAACTATATGAATTAAATTTATAATTTAACTAATATATATTCTTATTTTTGCTCATAAAAAACTTATTCGATGAGACTGCTACAATTAGACTATCTTTTAGTAATTATTAGGTGTGGGTTCAAAAACAAAATATATAATTTAAGGGGAATTTTTTTTTAAAAAAAAAAAAAAAAACTATTTACACAAAATAACAAAATTTTTAAATAGTTGTGATAGACGCTGATAGAAGTCTATCAAGGTTTATCAGTGATAGAAATGATAGAAATCTATCACTGATAAAGGCTGATAGAAGTTTATCAATGTGTATCAATGTTTTTTTTGTTATTTTCTGTAAATAATTTGACATTTTTTCTATATATAAAAATTTCCCATAATTTAACTGTTCGAAATATATTTTTATAATTTTTCTTTCATACATCATTGATATTCATCAAAACAGTTTACATTTTCTCCTAACTTCCCTTTTTTCAATTCTAAACAAATGAAGGAGTTGGGAATACAAAAAGTGAGAAGGATGAGGATGGGATGTTGGATATTGATACAACTATATCTTTAGAAACCACTTGGCATGCCATGGAAGATTTGGTTTCCACTGGTTTAGTTCGCAGTATTAGAATTAGGTATTTTACCTTCTATATATTTATTAGTACAAAATTGGGCTATATAATTCCAGTCGAAAACTGATGTTATAGGAATATGATATCGGTTAAGAGAGTGATATTGAAGAAACTGAGCTATATTCTCTTCTAAATAAGAACACTACTTTAATTTAGATAACTTGTCTAACCATTTTAAATTTATTGGATATGTCGAACACTTGCATTGGCATAATTGACATATACTATTAGTCAATAAAAAAATGAAATATGTCAAAATCGATATATTTTTTTGAAAATATATTCACTTTTAAAATGTACATTTAAATAAACACGTTCTTATCATGTTCGTGTCTTATATTTTATAAATGATGTATTTATTGTGTTTGTCTCGTGATTGTACTTTTGTTTTTCTGAATCTCTGACTTTTCTATTAATTTTTTAAAAGAGAAAATTACAACAATTATTCTTACACCTTTGAAGTTCAATCTTACAATAAAATAAGGCTTGAATGATTATATTTTTAATTCTTATAAATTTAGTTTTGGTCTATTTTAGTCTTCATTGGTTAAAACACTTATTTTGTTTTATGTACTTTTCCAACCTTTTTACTTAATTTAAAACATCTATTTAAGCTTTTAATGATTGTATTTTATATAATCACGCTAAAAAAAATCCAAAAGTTTGCCAATATTTTCAAGACGAAGCTTATTGTAAGTATGATAATGTTGTACGTGGTCAAATTTTGATTAAAAAGTAAGATAATACCCAAACTAAAAATGATTGCTTCTTGAAAGGAAAATTAATTAAAATAAACGTTTTGAAAGCACACGTATACATAATCAAATACGAACAAACGGAAATAAATTAAGAAAATATAATTTAATTAGGAGTTCGTATATTTGATAGACTACTTCAAAACACATTATCGTTAATAATATTTTGAGGTTGTGTGGATAACAAAATGAACTTGCAGCAACTACGATATATTTATGACAAGAGATTGTTTGGCATACTCAAAAGTGAAGCCTGCTGTGAACCAAATTGAAATGCATCCTTACTTTCAAAGAGAATCTCTTGTCAAATTTTGCCAAAAGCATGAGATTTGTGTCACAGCTCATACTCCTTTAGGGGGTGCTGCTGCAAATACTAATTCTTAA ATGGCGATAACTCTGAACAATGGCTTCAAGATGCCGCAAATTGGGTTAGGAGTTTGGCGTATGGAGAAGCAACAAATTAGAGACCTCATTATCAACGCCATTAAGATTGGTTATCGACATTTTGACTGCGCCAGTACCGCCTCGTCGCCTTCAACTCTCTGGAATTCTGACCATGGACATGTTCTTGGGGCTTGCAAGGACAGCTTAAAAAAGCTTCAACTACAATATTTGGATCTTTACTTGGTGCACTTCCCAATAGCCATAAAGCATACAGGAGTTGGGAATACAAAAAGTGAGAAGGATGAGGATGGGATGTTGGATATTGATACAACTATATCTTTAGAAACCACTTGGCATGCCATGGAAGATTTGGTTTCCACTGGTTTAGTTCGCAGTATTAGAATTAGCAACTACGATATATTTATGACAAGAGATTGTTTGGCATACTCAAAAGTGAAGCCTGCTGTGAACCAAATTGAAATGCATCCTTACTTTCAAAGAGAATCTCTTGTCAAATTTTGCCAAAAGCATGAGATTTGTGTCACAGCTCATACTCCTTTAGGGGGTGCTGCTGCAAATACTAATTCTTAA ATGGCGATAACTCTGAACAATGGCTTCAAGATGCCGCAAATTGGGTTAGGAGTTTGGCGTATGGAGAAGCAACAAATTAGAGACCTCATTATCAACGCCATTAAGATTGGTTATCGACATTTTGACTGCGCCAGTACCGCCTCGTCGCCTTCAACTCTCTGGAATTCTGACCATGGACATGTTCTTGGGGCTTGCAAGGACAGCTTAAAAAAGCTTCAACTACAATATTTGGATCTTTACTTGGTGCACTTCCCAATAGCCATAAAGCATACAGGAGTTGGGAATACAAAAAGTGAGAAGGATGAGGATGGGATGTTGGATATTGATACAACTATATCTTTAGAAACCACTTGGCATGCCATGGAAGATTTGGTTTCCACTGGTTTAGTTCGCAGTATTAGAATTAGCAACTACGATATATTTATGACAAGAGATTGTTTGGCATACTCAAAAGTGAAGCCTGCTGTGAACCAAATTGAAATGCATCCTTACTTTCAAAGAGAATCTCTTGTCAAATTTTGCCAAAAGCATGAGATTTGTGTCACAGCTCATACTCCTTTAGGGGGTGCTGCTGCAAATACTAATTCTTAA MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTLWNSDHGHVLGACKDSLKKLQLQYLDLYLVHFPIAIKHTGVGNTKSEKDEDGMLDIDTTISLETTWHAMEDLVSTGLVRSIRISNYDIFMTRDCLAYSKVKPAVNQIEMHPYFQRESLVKFCQKHEICVTAHTPLGGAAANTNS Homology
BLAST of Lsi11G011440 vs. ExPASy Swiss-Prot
Match: P28475 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica OX=3750 GN=S6PDH PE=2 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 6.1e-71 Identity = 125/215 (58.14%), Postives = 158/215 (73.49%), Query Frame = 0
BLAST of Lsi11G011440 vs. ExPASy Swiss-Prot
Match: Q6IMN8 (Aldose reductase A OS=Dictyostelium discoideum OX=44689 GN=alrA PE=2 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 5.9e-34 Identity = 77/214 (35.98%), Postives = 115/214 (53.74%), Query Frame = 0
BLAST of Lsi11G011440 vs. ExPASy Swiss-Prot
Match: P15121 (Aldo-keto reductase family 1 member B1 OS=Homo sapiens OX=9606 GN=AKR1B1 PE=1 SV=3) HSP 1 Score: 142.9 bits (359), Expect = 3.9e-33 Identity = 84/214 (39.25%), Postives = 114/214 (53.27%), Query Frame = 0
BLAST of Lsi11G011440 vs. ExPASy Swiss-Prot
Match: Q5ZK84 (Aldo-keto reductase family 1 member A1 OS=Gallus gallus OX=9031 GN=AKR1A1 PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 6.6e-33 Identity = 80/213 (37.56%), Postives = 115/213 (53.99%), Query Frame = 0
BLAST of Lsi11G011440 vs. ExPASy Swiss-Prot
Match: Q3ZCJ2 (Aldo-keto reductase family 1 member A1 OS=Bos taurus OX=9913 GN=AKR1A1 PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32 Identity = 79/215 (36.74%), Postives = 118/215 (54.88%), Query Frame = 0
BLAST of Lsi11G011440 vs. ExPASy TrEMBL
Match: A0A0A0K0G2 (Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G007830 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.0e-92 Identity = 172/217 (79.26%), Postives = 181/217 (83.41%), Query Frame = 0
BLAST of Lsi11G011440 vs. ExPASy TrEMBL
Match: A0A1S4DX07 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Cucumis melo OX=3656 GN=LOC103490340 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91 Identity = 170/217 (78.34%), Postives = 181/217 (83.41%), Query Frame = 0
BLAST of Lsi11G011440 vs. ExPASy TrEMBL
Match: A0A5A7U5P4 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001450 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91 Identity = 170/217 (78.34%), Postives = 181/217 (83.41%), Query Frame = 0
BLAST of Lsi11G011440 vs. ExPASy TrEMBL
Match: A0A0A0K145 (Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G007810 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90 Identity = 168/218 (77.06%), Postives = 181/218 (83.03%), Query Frame = 0
BLAST of Lsi11G011440 vs. ExPASy TrEMBL
Match: A0A6J1C335 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Momordica charantia OX=3673 GN=LOC111008012 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 3.6e-90 Identity = 167/217 (76.96%), Postives = 179/217 (82.49%), Query Frame = 0
BLAST of Lsi11G011440 vs. NCBI nr
Match: XP_038888382.1 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Benincasa hispida]) HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93 Identity = 172/217 (79.26%), Postives = 182/217 (83.87%), Query Frame = 0
BLAST of Lsi11G011440 vs. NCBI nr
Match: XP_004148544.1 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Cucumis sativus] >KGN43185.1 hypothetical protein Csa_020578 [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 2.1e-92 Identity = 172/217 (79.26%), Postives = 181/217 (83.41%), Query Frame = 0
BLAST of Lsi11G011440 vs. NCBI nr
Match: XP_008448040.1 (PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cucumis melo] >XP_016900511.1 PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cucumis melo] >KAA0049677.1 NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cucumis melo var. makuwa] >TYK12196.1 NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cucumis melo var. makuwa]) HSP 1 Score: 345.9 bits (886), Expect = 2.3e-91 Identity = 170/217 (78.34%), Postives = 181/217 (83.41%), Query Frame = 0
BLAST of Lsi11G011440 vs. NCBI nr
Match: XP_011658562.1 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Cucumis sativus] >KGN43183.1 hypothetical protein Csa_020507 [Cucumis sativus]) HSP 1 Score: 342.4 bits (877), Expect = 2.5e-90 Identity = 168/218 (77.06%), Postives = 181/218 (83.03%), Query Frame = 0
BLAST of Lsi11G011440 vs. NCBI nr
Match: XP_022136281.1 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Momordica charantia]) HSP 1 Score: 340.9 bits (873), Expect = 7.4e-90 Identity = 167/217 (76.96%), Postives = 179/217 (82.49%), Query Frame = 0
BLAST of Lsi11G011440 vs. TAIR 10
Match: AT2G21250.2 (NAD(P)-linked oxidoreductase superfamily protein ) HSP 1 Score: 314.7 bits (805), Expect = 5.3e-86 Identity = 153/217 (70.51%), Postives = 169/217 (77.88%), Query Frame = 0
BLAST of Lsi11G011440 vs. TAIR 10
Match: AT2G21250.1 (NAD(P)-linked oxidoreductase superfamily protein ) HSP 1 Score: 314.7 bits (805), Expect = 5.3e-86 Identity = 153/217 (70.51%), Postives = 169/217 (77.88%), Query Frame = 0
BLAST of Lsi11G011440 vs. TAIR 10
Match: AT2G21260.1 (NAD(P)-linked oxidoreductase superfamily protein ) HSP 1 Score: 311.2 bits (796), Expect = 5.8e-85 Identity = 151/217 (69.59%), Postives = 169/217 (77.88%), Query Frame = 0
BLAST of Lsi11G011440 vs. TAIR 10
Match: AT2G37770.2 (NAD(P)-linked oxidoreductase superfamily protein ) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30 Identity = 74/210 (35.24%), Postives = 108/210 (51.43%), Query Frame = 0
BLAST of Lsi11G011440 vs. TAIR 10
Match: AT5G62420.1 (NAD(P)-linked oxidoreductase superfamily protein ) HSP 1 Score: 125.6 bits (314), Expect = 4.5e-29 Identity = 73/211 (34.60%), Postives = 109/211 (51.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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