Lsi11G011360 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G011360
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	B-box zinc finger family protein
Location	chr11: 19836786 .. 19838460 (-)
RNA-Seq Expression	Lsi11G011360
Synteny	Lsi11G011360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAAAAGAATTTAGAGTAAGAGAGAGGGAGAGAAAGAGAAAGAGGCCATGGCCGATTTTTCTAGAGCTTTTCTTAAAATGTCAGAATTACAATAAAAGAGCTTCAATCTTAGCTGTTGTCTTGTCCAGTAATGGCGATGAGCCCATAATTCTTTGTCTCCATCTTCCGCGCTTTAAATCCACCTCTCTTTCAATCCTTTGAAGTGAAAATCGAGATTCGATTCGGTTTGATTCGAATCGATTTTATTTTAGGAAGAGGAAAAGGATTCATGAAGATCCGTTGCGATGTTTGTGATCAAGCTGAGGCCTCTGTTTTTTGTTATGCTGATGAAGCTGCTCTTTGCCATGGATGTGATCTCCATGTTCATCGTGCTAATAAACTTGCTGGAAAACACTCGAGATTCTCTTTACTTCATCCGATCAAAAAGGATTCTCCTCGTTGCGATATCTGTCAGGTAATTTTTTTTTACTTTTTTAAGATGTTTATGCTCTGAATTTTGAGGTTTTTGTAAAATCGAATCAATAATGTTGCAGAGAATCTCTGCGTTTTTTTGTACCTTTCTTGGGAAATATCTGATTTATTTCGTCCGTTTCTGATCGGTTTTTGGAGTTGGAATGATTTCGCGATCGTTGATTTAGAGTGCTCAGAAGTAGAGGATTCTTACTGATTTTGATTTTCGTTTTCAGGAACGGCGCGCGCTAGTATTCTGTCAACAAGATAGGGCAATTCTTTGTAGAGAATGCGACATTTCGATTCACGAAGCGAACGAACATACACAGAAGCACAATCGATTTCTTCTTACAGGTGTGAAGCTTTCTTCGACTTGTTATTCGTATCAAACATCTTCGTCCTCCAATGGCTGCGATGCCGCCATGGATGTTAAAACTGGAAGCTCCAACGCTTGCAGCAAAAGACCTAAAATGGCCGCGAATGAAATCTCGAGCTCTCATTCAGCTGAAAAACCTACTCCATCGACAAGTAATTACAAGGTTGAAGACGGCCAAGGAAGCGACGGCGGTTCGCTCTCGACAAGCAGCATATCGGAATATTTGGAAACATTGCCGGGATGGTGCGTGGAGGAGTTTCTTGATCCTTCCGCCGCTGCCAATCGTTTCTGTAAGGTTTGCAGTACACCCTCGGTGTAGAGTTTTGAAAGTATTTTCATGAACTTCCATATCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAATGGATTCCTATGGATCGGTGTACAGTTTAATGGCGAAATTCTGGGATTTGGGAATCAAAATCTGGAAAGGCAACAAGAATCACTAAGCACTATCAAGAACACCTTGGAAATCTTAGGTAAAAATTCTCAAATTATTACTAGTAGGTGTTGGAATGGATTAGTACTTGGGATCTCCATGAAAACTTGTAAAGTTGAAAAGATGGAACAGTGGATGATCTAATCATCAGCAGCCAGATAATTTGGCTCTGAAACAATTCTGTTTTAAAAAAAAAAAAAATCAAGAACAAACAGAAGCTAACTTTTTGTTTGTTTGTTGTTGCTGATTTGCATATTTTACCTCCACCCACCACTCATTCTCTTTGTTTTGCCATTCCCTTTGCTCAATTCTTTTTTTTTAAAAAAAAAACTGGTTATGATGAGAATGGAATCAAAATCACTTTGGTTGTT

mRNA sequence

TTTTAAAAGAATTTAGAGTAAGAGAGAGGGAGAGAAAGAGAAAGAGGCCATGGCCGATTTTTCTAGAGCTTTTCTTAAAATGTCAGAATTACAATAAAAGAGCTTCAATCTTAGCTGTTGTCTTGTCCAGTAATGGCGATGAGCCCATAATTCTTTGTCTCCATCTTCCGCGCTTTAAATCCACCTCTCTTTCAATCCTTTGAAGTGAAAATCGAGATTCGATTCGGTTTGATTCGAATCGATTTTATTTTAGGAAGAGGAAAAGGATTCATGAAGATCCGTTGCGATGTTTGTGATCAAGCTGAGGCCTCTGTTTTTTGTTATGCTGATGAAGCTGCTCTTTGCCATGGATGTGATCTCCATGTTCATCGTGCTAATAAACTTGCTGGAAAACACTCGAGATTCTCTTTACTTCATCCGATCAAAAAGGATTCTCCTCGTTGCGATATCTGTCAGGAACGGCGCGCGCTAGTATTCTGTCAACAAGATAGGGCAATTCTTTGTAGAGAATGCGACATTTCGATTCACGAAGCGAACGAACATACACAGAAGCACAATCGATTTCTTCTTACAGGTGTGAAGCTTTCTTCGACTTGTTATTCGTATCAAACATCTTCGTCCTCCAATGGCTGCGATGCCGCCATGGATGTTAAAACTGGAAGCTCCAACGCTTGCAGCAAAAGACCTAAAATGGCCGCGAATGAAATCTCGAGCTCTCATTCAGCTGAAAAACCTACTCCATCGACAAGTAATTACAAGGTTGAAGACGGCCAAGGAAGCGACGGCGGTTCGCTCTCGACAAGCAGCATATCGGAATATTTGGAAACATTGCCGGGATGGTGCGTGGAGGAGTTTCTTGATCCTTCCGCCGCTGCCAATCGTTTCTGTAAGGTTTGCAGTACACCCTCGGTGTAGAGTTTTGAAATTTAATGGCGAAATTCTGGGATTTGGGAATCAAAATCTGGAAAGGCAACAAGAATCACTAAGCACTATCAAGAACACCTTGGAAATCTTAGGTAAAAATTCTCAAATTATTACTAGTAGGTGTTGGAATGGATTAGTACTTGGGATCTCCATGAAAACTTGTAAAGTTGAAAAGATGGAACAGTGGATGATCTAATCATCAGCAGCCAGATAATTTGGCTCTGAAACAATTCTGTTTTAAAAAAAAAAAAAATCAAGAACAAACAGAAGCTAACTTTTTGTTTGTTTGTTGTTGCTGATTTGCATATTTTACCTCCACCCACCACTCATTCTCTTTGTTTTGCCATTCCCTTTGCTCAATTCTTTTTTTTTAAAAAAAAAACTGGTTATGATGAGAATGGAATCAAAATCACTTTGGTTGTT

Coding sequence (CDS)

ATGAAGATCCGTTGCGATGTTTGTGATCAAGCTGAGGCCTCTGTTTTTTGTTATGCTGATGAAGCTGCTCTTTGCCATGGATGTGATCTCCATGTTCATCGTGCTAATAAACTTGCTGGAAAACACTCGAGATTCTCTTTACTTCATCCGATCAAAAAGGATTCTCCTCGTTGCGATATCTGTCAGGAACGGCGCGCGCTAGTATTCTGTCAACAAGATAGGGCAATTCTTTGTAGAGAATGCGACATTTCGATTCACGAAGCGAACGAACATACACAGAAGCACAATCGATTTCTTCTTACAGGTGTGAAGCTTTCTTCGACTTGTTATTCGTATCAAACATCTTCGTCCTCCAATGGCTGCGATGCCGCCATGGATGTTAAAACTGGAAGCTCCAACGCTTGCAGCAAAAGACCTAAAATGGCCGCGAATGAAATCTCGAGCTCTCATTCAGCTGAAAAACCTACTCCATCGACAAGTAATTACAAGGTTGAAGACGGCCAAGGAAGCGACGGCGGTTCGCTCTCGACAAGCAGCATATCGGAATATTTGGAAACATTGCCGGGATGGTGCGTGGAGGAGTTTCTTGATCCTTCCGCCGCTGCCAATCGTTTCTGTAAGGTTTGCAGTACACCCTCGGTGTAG

Protein sequence

MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDICQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNGCDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLSTSSISEYLETLPGWCVEEFLDPSAAANRFCKVCSTPSV

Homology

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BLAST of Lsi11G011360 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.9e-56
Identity = 121/202 (59.90%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKI C VCD+ EASVFC ADEAALC+GCD HVH ANKLAGKH RFSL  P  KD+P CDI
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           C ERRAL+FCQ+DRAILCRECDI IH+ANEHT+KHNRFLLTGVK+S++  +Y  +S+SN 
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120

Query: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDG----QGSDGGSLS 180
             A    KT   +  S+ P  A+NE+ +S S+   T S   Y +E+       S  GS  
Sbjct: 121 AAAFGRAKTRPKSVSSEVPSSASNEVFTSSSS--TTTSNCYYGIEENYHHVSDSGSGSGC 180

Query: 181 TSSISEYL-ETLPGWCVEEFLD 198
           T SISEYL ETLPGW VE+ L+
Sbjct: 181 TGSISEYLMETLPGWRVEDLLE 200

[Close]

BLAST of Lsi11G011360 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.0e-50
Identity = 116/211 (54.98%), Postives = 141/211 (66.82%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKD--SPRC 60
           MKIRCDVCD+ EASVFC ADEA+LC GCD  VH ANKLA KH RFSLL+P   +  SP C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQ-TSSS 120
           DICQ+++AL+FCQQDRAILC++CD SIH ANEHT+KH+RFLLTGVKLS+T   Y+ TS S
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 SNGCDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLST 180
           S+   +  D     S+     P      +S+   + K  P +   K+  G  S     ST
Sbjct: 121 SSSSSSNQDFSVPGSSI--SNPPPLKKPLSAPPQSNKIQPFS---KINGGDASVNQWGST 180

Query: 181 SSISEYL-ETLPGWCVEEFLDPSAAANRFCK 208
           S+ISEYL +TLPGW VE+FLD S     F K
Sbjct: 181 STISEYLMDTLPGWHVEDFLDSSLPTYGFSK 206

[Close]

BLAST of Lsi11G011360 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.3e-30
Identity = 71/148 (47.97%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKI+CDVC++A A+V C ADEAALC  CD+ +H ANKLA KH R   L+ +    PRCDI
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVK--LSSTCYSYQTSSS- 120
           CQE+ A +FC +DRA+LCR+CD SIH AN  +  H RFL TG+K  L+ST  S +   + 
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 120

Query: 121 ---SNGCDAAMDVKTGSSNACSKRPKMA 143
              SN    A  +   S++   ++P  A
Sbjct: 121 PEPSNNQQKANQIPAKSTSQQQQQPSSA 147

[Close]

BLAST of Lsi11G011360 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-29
Identity = 82/196 (41.84%), Postives = 105/196 (53.57%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKI+C+VC+ AEA+V C ADEAALC  CD  +H ANKLAGKH R   L       P+CDI
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVP-LSASASSIPKCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVK--LSSTCYSYQTSSSS 120
           CQE     FC QDRA+LCR+CD++IH  N H   H RFLLTG+K  L S      T SS 
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSP 120

Query: 121 NGCDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLSTS 180
              D  M+ K     +  +  KMA +        E+        KV D   +    +S+ 
Sbjct: 121 TNDDKTMETKP-FVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVNDQTSTKLPLVSSG 180

Query: 181 SISEYLETLPGWCVEE 195
           S +    ++P W +EE
Sbjct: 181 STT---GSIPQWQIEE 191

[Close]

BLAST of Lsi11G011360 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-26
Identity = 58/122 (47.54%), Postives = 77/122 (63.11%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKI+CDVC++A A++ C ADEAALC  CD+ VH ANKLA KH R   L  +    P CDI
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRL-FLDSLSTKFPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           C E+ A +FC +DRA+LCR+CD + H  N  +  H RFL TG++++ +  S       N 
Sbjct: 61  CLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNH 120

Query: 121 CD 123
            D
Sbjct: 121 FD 121

[Close]

BLAST of Lsi11G011360 vs. ExPASy TrEMBL
Match: A0A6J1C1T9 (B-box zinc finger protein 20 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007609 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 184/208 (88.46%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKIRCDVCD+AEA+VFC ADEAALCHGCDL VH+ANKLAGKHSRFSLL PI  +SP CDI
Sbjct: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHEANEHTQKH+RFLLTGVKLS TC+SYQTSSSS+G
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120

Query: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLSTSSI 180
           CDA MDVKTGSS+ACSKRPK A  EISSSHSAEK  PSTSNYK EDGQ SDGGSLSTSSI
Sbjct: 121 CDAGMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPS-AAANRFCK 208
           SEYLETLPGWCVEEFLDPS AAANRFCK
Sbjct: 181 SEYLETLPGWCVEEFLDPSAAAANRFCK 208

[Close]

BLAST of Lsi11G011360 vs. ExPASy TrEMBL
Match: A0A6J1C1I6 (B-box zinc finger protein 20 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007609 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.6e-97
Identity = 182/206 (88.35%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKIRCDVCD+AEA+VFC ADEAALCHGCDL VH+ANKLAGKHSRFSLL PI  +SP CDI
Sbjct: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHEANEHTQKH+RFLLTGVKLS TC+SYQTSSSS+G
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120

Query: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLSTSSI 180
           CDA MDVKTGSS+ACSKRPK A  EISSSHSAEK  PSTSNYK EDGQ SDGGSLSTSSI
Sbjct: 121 CDAGMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPS-AAANRF 206
           SEYLETLPGWCVEEFLDPS AAANRF
Sbjct: 181 SEYLETLPGWCVEEFLDPSAAAANRF 206

[Close]

BLAST of Lsi11G011360 vs. ExPASy TrEMBL
Match: A0A1S3BI96 (B-box zinc finger protein 20-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490354 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 9.6e-97
Identity = 194/225 (86.22%), Postives = 200/225 (88.89%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKIRCDVCDQ EASVFCYADEAALCH CDLHVHRANKLAGKHSRFSLL PIKKDSP CDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHE NEHTQKHNRFLLTGVKLSSTC+SYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 C--DAAMDVKTGSSNA-CSKRPKMAA--NEISSSHSAEKPT-PSTSNYKV-EDGQG-SDG 180
           C  DA MDVKTGSSNA CSKRPKMAA   +IS+SHSAEK T PSTSN+ V +DGQ  SDG
Sbjct: 121 CDIDAPMDVKTGSSNASCSKRPKMAAKDQQISTSHSAEKATPPSTSNHLVDQDGQALSDG 180

Query: 181 GSLSTSSISEYLETLPGWCVEEFLDPS------AAANRFCKVCST 212
           GS STSSISEYLETLPGWCVEEFLDPS      AAANRFCK+CST
Sbjct: 181 GSFSTSSISEYLETLPGWCVEEFLDPSAAAAAAAAANRFCKLCST 225

[Close]

BLAST of Lsi11G011360 vs. ExPASy TrEMBL
Match: A0A6J1EIZ3 (B-box zinc finger protein 20-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433754 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96
Identity = 185/208 (88.94%), Postives = 190/208 (91.35%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKIRCDVCDQAEASVFC ADEAALCHGCDLHVHRANKLAGKHSRFSLL PIK DSP CDI
Sbjct: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIH  NE TQKHNRFLLTGVKLSST +SYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120

Query: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLSTSSI 180
            +AAMDVKT SS+ACSK PKMAA+E SSS S+EK  PSTSNYKVEDGQ SDGGS STSSI
Sbjct: 121 YNAAMDVKTRSSHACSKSPKMAAHETSSSPSSEKAAPSTSNYKVEDGQASDGGSFSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPS-AAANRFCK 208
           SEYLETLPGWCVEEFLDPS AAANRFCK
Sbjct: 181 SEYLETLPGWCVEEFLDPSTAAANRFCK 208

[Close]

BLAST of Lsi11G011360 vs. ExPASy TrEMBL
Match: A0A6J1I179 (LOW QUALITY PROTEIN: B-box zinc finger protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111469932 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.2e-96
Identity = 184/208 (88.46%), Postives = 188/208 (90.38%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKIRCDVCDQAEASVFC ADEAALCHGCDLHVHRANKLAGKHSRFSLL PIK D P CDI
Sbjct: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDYPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIH  NEHTQKHNRF LTGVKLSST +SYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHGTNEHTQKHNRFFLTGVKLSSTSFSYQTSSSSNG 120

Query: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLSTSSI 180
            + AMDVKT SS+ACSK PKMAA+E SSS SAEK  PSTSNYKVEDGQ SDGGS STSSI
Sbjct: 121 YNDAMDVKTQSSHACSKSPKMAAHETSSSPSAEKAAPSTSNYKVEDGQASDGGSFSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPS-AAANRFCK 208
           SEYLETLPGWCVEEFLDPS AAANRFCK
Sbjct: 181 SEYLETLPGWCVEEFLDPSTAAANRFCK 208

[Close]

BLAST of Lsi11G011360 vs. NCBI nr
Match: XP_038887850.1 (B-box zinc finger protein 20-like isoform X1 [Benincasa hispida])

HSP 1 Score: 403.7 bits (1036), Expect = 1.0e-108
Identity = 200/208 (96.15%), Postives = 201/208 (96.63%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKIRCDVCDQAEASVFCYADEAALCH CDLHVHRANKLAGKHSRFSLL PIKKDSPRCDI
Sbjct: 1   MKIRCDVCDQAEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHE NEHTQKHNRFLLTGVKLSSTC+SYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPT-PSTSNYKVEDGQGSDGGSLSTSS 180
           CDAAMDVKTGSSNACSKRPKMAANEISSSHS EK T PSTSNYKVEDGQGSDGGS STSS
Sbjct: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSGEKATPPSTSNYKVEDGQGSDGGSFSTSS 180

Query: 181 ISEYLETLPGWCVEEFLDPSAAANRFCK 208
           ISEYLETLPGWCVEEFLDPSAAANRFCK
Sbjct: 181 ISEYLETLPGWCVEEFLDPSAAANRFCK 208

[Close]

BLAST of Lsi11G011360 vs. NCBI nr
Match: XP_038887851.1 (B-box zinc finger protein 20-like isoform X2 [Benincasa hispida])

HSP 1 Score: 398.3 bits (1022), Expect = 4.2e-107
Identity = 198/206 (96.12%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKIRCDVCDQAEASVFCYADEAALCH CDLHVHRANKLAGKHSRFSLL PIKKDSPRCDI
Sbjct: 1   MKIRCDVCDQAEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHE NEHTQKHNRFLLTGVKLSSTC+SYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPT-PSTSNYKVEDGQGSDGGSLSTSS 180
           CDAAMDVKTGSSNACSKRPKMAANEISSSHS EK T PSTSNYKVEDGQGSDGGS STSS
Sbjct: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSGEKATPPSTSNYKVEDGQGSDGGSFSTSS 180

Query: 181 ISEYLETLPGWCVEEFLDPSAAANRF 206
           ISEYLETLPGWCVEEFLDPSAAANRF
Sbjct: 181 ISEYLETLPGWCVEEFLDPSAAANRF 206

[Close]

BLAST of Lsi11G011360 vs. NCBI nr
Match: XP_023553894.1 (B-box zinc finger protein 20-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.0 bits (985), Expect = 8.3e-103
Identity = 190/214 (88.79%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSL+ PIKKDSPRCDI
Sbjct: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLIQPIKKDSPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           CQERRALVFCQQDRAI+CRECDISIHE NEHTQKH+RFLLTGVKLSSTC+S QTSSSS+G
Sbjct: 61  CQERRALVFCQQDRAIICRECDISIHETNEHTQKHSRFLLTGVKLSSTCFSSQTSSSSHG 120

Query: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLSTSSI 180
           CDAAMDVKTGSS+ACSK+PK+A   I SSHSAEK  PSTSNYKVEDGQ SDGGS STSSI
Sbjct: 121 CDAAMDVKTGSSHACSKKPKIAVKAI-SSHSAEKAAPSTSNYKVEDGQASDGGSFSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAANRFCKVCSTPSV 215
           SEYLETLP WC+EEFLDPSA AN FCKV STPSV
Sbjct: 181 SEYLETLPEWCLEEFLDPSAVANHFCKVRSTPSV 213

[Close]

BLAST of Lsi11G011360 vs. NCBI nr
Match: XP_023553893.1 (B-box zinc finger protein 20-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.2 bits (962), Expect = 3.8e-100
Identity = 186/216 (86.11%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSL+ PIKKDSPRCDI
Sbjct: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLIQPIKKDSPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           CQERRALVFCQQDRAI+CRECDISIHE NEHTQKH+RFLLTGVKLSSTC+S QTSSSS+G
Sbjct: 61  CQERRALVFCQQDRAIICRECDISIHETNEHTQKHSRFLLTGVKLSSTCFSSQTSSSSHG 120

Query: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLSTSSI 180
           CDAAMDVKTGSS+ACSK+PK+A   I SSHSAEK  PSTSNYKVEDGQ SDGGS STSSI
Sbjct: 121 CDAAMDVKTGSSHACSKKPKIAVKAI-SSHSAEKAAPSTSNYKVEDGQASDGGSFSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAANRFCK---VCSTPS 214
           SEYLETLP WC+EEFLDPSA AN FCK   +C + S
Sbjct: 181 SEYLETLPEWCLEEFLDPSAVANHFCKLNAICESES 215

[Close]

BLAST of Lsi11G011360 vs. NCBI nr
Match: KAG6572061.1 (B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.5 bits (955), Expect = 2.5e-99
Identity = 182/208 (87.50%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSL+ PIKKDSPRCDI
Sbjct: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLIQPIKKDSPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           CQERRA+VFCQQDRAI+CRECDISIHE NEHTQKH+RFLLTGVKLSSTC+S QTSSSS+G
Sbjct: 61  CQERRAIVFCQQDRAIICRECDISIHETNEHTQKHSRFLLTGVKLSSTCFSSQTSSSSHG 120

Query: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLSTSSI 180
           CDAAMDVKTGSS+ACSK+PK+A   I SSHSAEK  PSTSNYKVEDGQ SDGGS STSSI
Sbjct: 121 CDAAMDVKTGSSHACSKKPKIAVKAI-SSHSAEKAAPSTSNYKVEDGQASDGGSFSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAANRFCKV 209
           SEYLETLP WC+EEFLDP A AN FCK+
Sbjct: 181 SEYLETLPEWCLEEFLDPCAVANHFCKL 207

[Close]

BLAST of Lsi11G011360 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein )

HSP 1 Score: 218.4 bits (555), Expect = 5.6e-57
Identity = 121/202 (59.90%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKI C VCD+ EASVFC ADEAALC+GCD HVH ANKLAGKH RFSL  P  KD+P CDI
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNG 120
           C ERRAL+FCQ+DRAILCRECDI IH+ANEHT+KHNRFLLTGVK+S++  +Y  +S+SN 
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120

Query: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDG----QGSDGGSLS 180
             A    KT   +  S+ P  A+NE+ +S S+   T S   Y +E+       S  GS  
Sbjct: 121 AAAFGRAKTRPKSVSSEVPSSASNEVFTSSSS--TTTSNCYYGIEENYHHVSDSGSGSGC 180

Query: 181 TSSISEYL-ETLPGWCVEEFLD 198
           T SISEYL ETLPGW VE+ L+
Sbjct: 181 TGSISEYLMETLPGWRVEDLLE 200

[Close]

BLAST of Lsi11G011360 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 )

HSP 1 Score: 201.4 bits (511), Expect = 7.1e-52
Identity = 116/211 (54.98%), Postives = 141/211 (66.82%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKD--SPRC 60
           MKIRCDVCD+ EASVFC ADEA+LC GCD  VH ANKLA KH RFSLL+P   +  SP C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQ-TSSS 120
           DICQ+++AL+FCQQDRAILC++CD SIH ANEHT+KH+RFLLTGVKLS+T   Y+ TS S
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 SNGCDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLST 180
           S+   +  D     S+     P      +S+   + K  P +   K+  G  S     ST
Sbjct: 121 SSSSSSNQDFSVPGSSI--SNPPPLKKPLSAPPQSNKIQPFS---KINGGDASVNQWGST 180

Query: 181 SSISEYL-ETLPGWCVEEFLDPSAAANRFCK 208
           S+ISEYL +TLPGW VE+FLD S     F K
Sbjct: 181 STISEYLMDTLPGWHVEDFLDSSLPTYGFSK 206

[Close]

BLAST of Lsi11G011360 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.4e-31
Identity = 71/148 (47.97%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKI+CDVC++A A+V C ADEAALC  CD+ +H ANKLA KH R   L+ +    PRCDI
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVK--LSSTCYSYQTSSS- 120
           CQE+ A +FC +DRA+LCR+CD SIH AN  +  H RFL TG+K  L+ST  S +   + 
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 120

Query: 121 ---SNGCDAAMDVKTGSSNACSKRPKMA 143
              SN    A  +   S++   ++P  A
Sbjct: 121 PEPSNNQQKANQIPAKSTSQQQQQPSSA 147

[Close]

BLAST of Lsi11G011360 vs. TAIR 10
Match: AT1G06040.1 (B-box zinc finger family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.4e-31
Identity = 71/148 (47.97%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKI+CDVC++A A+V C ADEAALC  CD+ +H ANKLA KH R   L+ +    PRCDI
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVK--LSSTCYSYQTSSS- 120
           CQE+ A +FC +DRA+LCR+CD SIH AN  +  H RFL TG+K  L+ST  S +   + 
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 120

Query: 121 ---SNGCDAAMDVKTGSSNACSKRPKMA 143
              SN    A  +   S++   ++P  A
Sbjct: 121 PEPSNNQQKANQIPAKSTSQQQQQPSSA 147

[Close]

BLAST of Lsi11G011360 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-30
Identity = 82/196 (41.84%), Postives = 105/196 (53.57%), Query Frame = 0


Query: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDI 60
           MKI+C+VC+ AEA+V C ADEAALC  CD  +H ANKLAGKH R   L       P+CDI
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVP-LSASASSIPKCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVK--LSSTCYSYQTSSSS 120
           CQE     FC QDRA+LCR+CD++IH  N H   H RFLLTG+K  L S      T SS 
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSP 120

Query: 121 NGCDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKPTPSTSNYKVEDGQGSDGGSLSTS 180
              D  M+ K     +  +  KMA +        E+        KV D   +    +S+ 
Sbjct: 121 TNDDKTMETKP-FVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVNDQTSTKLPLVSSG 180

Query: 181 SISEYLETLPGWCVEE 195
           S +    ++P W +EE
Sbjct: 181 STT---GSIPQWQIEE 191

The following BLAST results are available for this feature:

BLAST of Lsi11G011360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0IGM7	7.9e-56	59.90	B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1	[more]
Q9LQZ7	1.0e-50	54.98	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]
Q96288	3.3e-30	47.97	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
Q9SYM2	1.7e-29	41.84	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q9SID1	1.0e-26	47.54	B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2	[more]

BLAST of Lsi11G011360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1T9	1.3e-98	88.46	B-box zinc finger protein 20 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1C1I6	5.6e-97	88.35	B-box zinc finger protein 20 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3BI96	9.6e-97	86.22	B-box zinc finger protein 20-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1EIZ3	1.6e-96	88.94	B-box zinc finger protein 20-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1I179	6.2e-96	88.46	LOW QUALITY PROTEIN: B-box zinc finger protein 20-like OS=Cucurbita maxima OX=36...	[more]

BLAST of Lsi11G011360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887850.1	1.0e-108	96.15	B-box zinc finger protein 20-like isoform X1 [Benincasa hispida]	[more]
XP_038887851.1	4.2e-107	96.12	B-box zinc finger protein 20-like isoform X2 [Benincasa hispida]	[more]
XP_023553894.1	8.3e-103	88.79	B-box zinc finger protein 20-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023553893.1	3.8e-100	86.11	B-box zinc finger protein 20-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6572061.1	2.5e-99	87.50	B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lsi11G011360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39070.1	5.6e-57	59.90	B-box zinc finger family protein	[more]
AT1G75540.1	7.1e-52	54.98	salt tolerance homolog2	[more]
AT1G06040.2	2.4e-31	47.97	B-box zinc finger family protein	[more]
AT1G06040.1	2.4e-31	47.97	B-box zinc finger family protein	[more]
AT1G78600.1	1.2e-30	41.84	light-regulated zinc finger protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 4..47 e-value: 2.1E-7 score: 40.6 coord: 53..100 e-value: 2.9E-14 score: 63.4
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 3..44 e-value: 1.2E-6 score: 28.5 coord: 55..92 e-value: 2.2E-7 score: 30.9
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 53..100 score: 10.309793
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 9.854613
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..100 e-value: 1.6E-8 score: 36.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..177
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..208
None	No IPR available	PANTHER	PTHR31832:SF52	B-BOX ZINC FINGER PROTEIN 20	coord: 1..208
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 58..100 e-value: 7.83146E-15 score: 64.2411
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 5..47 e-value: 5.41006E-13 score: 59.2335

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G011360.1	Lsi11G011360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding