Lsi11G011250 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G011250
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	chromatin remodeling protein SHL-like
Location	chr11: 19679215 .. 19684307 (+)
RNA-Seq Expression	Lsi11G011250
Synteny	Lsi11G011250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGTAGGTGTAGCCCAACTCTAATTAGTAAAAATAAAATTTTTACAAAATCAAAAAGAAAAAAAAAGTGGAAAAAAAAATCTTCACCAATGACTGTTACAAAAATCTGCCCTCATTTGCTCCACCGTCGCTTAGTAATATTGGCTTTGGCATATGCCGCCACGTGACAACCAAATCCACTCCTCCGCCGGACATTTTCCCCTTTTCACTGCCACCGATCACCCTGCAGGTAAACTCCGGCGACTACTTTTCCGGCCAAATTCACTCTTCTCCTAATCCTTTTACTTCTTCCTTCTATTAATTTCTATGAAACTTCGCTCGATTTCGCTTCTTCTCTTCTAATTCCAGGGCTCCTTTTTCATGGCCAAACCCAAGGCTCCGAGACAAACCCTAGATTCTTACACTGTCAAACGCATCAACAAAACCATTAAAGGTAATACAATCCACTCCCTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTTTTATTGGAATCTCTCACATGGTTCCATTTTCCTTCCGTTTCTGATCTTCTGGTATTTTTCGGGCTTTTGTTCTTCTTAGCCGGCGATTGCGTGCTTATGAGGCCCTCCGAACCCTCGAAGCCGTCGTATGTTGCTAAGATTGAGAAGATTGAGGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGCCGGAGGAATCAATTGGCGGTCGTAGACAGTTTCATGGCTCGAAGGAGTTGTTTCTCTCCGACCATTATGACGTTCAAAGCGCCGACACCATCGAGGGCAAGTGTACGGTGCATACGTTTAAGAATTATACCAAGCTTGATGCCGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCACTACTGGAGCTTTCAATCCCGATCGAGTGGCTGTGTGAGTCTTTTTAGTAATTGAATTGTATTGTATTGCTGGGTTTGATATTCTGTTCATGTTTTTGGCATTAAGTACTTCTGAAATGTGATCGTTCTGACTTGACTTGACATGGGAAGAAATTGATTTCCATAGTGAGTATTATTACTAGTTTAGCTGCATTGTGGTTCCAGCGTTGATTTTTATGGTTTTCTGTTCATAACTCTTATGCAGTTCGTGAATTTAAGTACTCAAAACTCTTCGAATTGATGTTCTTATTGCCATTTTCAGTTTCAGCATGACACTTTTTATTTAAAGATTGAATTTTGATCAGGATTCCATTCTTTTCTACTATATTATGTATATTGTTATATCTCACATTAGTCATTTAAGCTTATGAATCTCCTTTTTCCATAGCTTTACCTGATTCTCCTGATGCCAAATTTCACTTCATTTTATGTTGCAGGTATTGCAAGTGTGAGATGCCTTATAATCCCGACGACCTAATGGTTCAATGTGAGAGCTGCAGTGATTGGTAAGCTGGGTGTTTATGATGCTATTGATTTCATTTGCAGCCTTAACACATGCTTATGAAGGTATTTATTGTTTATAGTGGTGTGCGTATGCTCCTTCTATATTCAGGGCCTATTAGAAACACAATTACAGTTAAAACGAATTCATGAAAAATTTAACCACCAATGTAATATGGACTCATCTTTATTTTTGGGTTCTTGTATATATATTATCTCCTATTACCCTAGATTTGTGGTACTTTCAGCTTGTTATATTTCTGTTCTAGTGATGGAGTAACGAATGGAAAATAGAGTTTAGGAAAACAATAAATAGGAGATTAGCTAAAAAATACTTTGGTTCAATGTAATGTTTACAAAATGCTGGATGCACTCTGAAGTGTTGAGCTTTTTGTTTTCTAAGAGTCAGGAGGTGCGGATAAGATCTTAACTGGAGTGAAGCTAGACGCTTCATGTAAGTGCTTGATAATTCAACGTACTAGTTTCCGTCAAGAATGCAGAGTCATATCTAACCATGTATTTTATGTTCGGTTAATGTCTTCTTCATTGTAGAATATGTTTTTCTCTGACGGATACTGGTACGTCGAATTATGAAGCACCAGTAATCTTTTAATTGTAAGCTTACTGAGCTTATATGTATACCCTAGAAACAAGAGGTATGTATTTTCACCAAAATAAGGCATAAAACAGCCTAGGGGCTGGGGGGAGAGGGAACCCCCCCACCCAAGAGAACTACTTACAAAGAAGGCTTTCAATCCAAGAGGTTAAAAGAATGAGAATAATTATAAAATTAATCATTGAAACTATGACACCACCAAGAAGCATACTGAGCTTATTTATATTGAAAATGATATCTGAAATTATAATGATAAGGTTTCATTTAAATCTTATTTTAATTAGAACCTTCAATTGTCTTTTTTTTTTTTTTTTACACAAACCTTTTTGTAATTACACCACTTTTCTGCTTTTTTCAAAATTAGTATTTTATTTCTTTCTGTAATCTCCTTTGATAGACATTCTCCAAATTTCTAGGTTTAGAAATCATCTATATATGGTTTTTTGTAATCTCTCACTGGCAATTCCTTCAACAAGGAAAAGAGAAATCCTTCGGGTCTAGCTCACTAGATCGTTCTTATGGAATTTAATCTCTGGTTCGGAAGGAACAATAGGATTTTAGTGACAAGGAAACCCATATAGACAAATTCATTGACATTTTTTTTTTGTGAAGCCCTCAAATGGTGTAAAATTGTAAATTACCTCCGTTTCAATAGCTATAGTGTAGTTTAACTTACAATAATTGGAAGAGTTTTTTGCAATCTTCCATGGTTTGGATCTTGGTTTTTCTCCCCTTCCCATTTGTAAGTTCATATCATCTATGAAATTATCTATGTTCCTTCCCCCTCCCCTTTTCTTCCATTCTTTCTAGTGGCTATGGGTTCAAGTACAGCTCCTAAGTACAAAACTTAATAATTAAAAAAAAATCCTGTCTTTTAGGCCATGCTTAGCTAGTTAAGGCATTATATCATCGACCAAAAGGTCAAAGGTTCAAATCACAACTTCTATTTATAGTTAAAATATTTTTTTTCAAGAAAAAAACAGTCTTTCAGATCTGGTCTCGAGTGGGCAAAGCCTTCCTGATCATTGGACTGTGTCATAAGCATAATACACAATTCCCTTAGTTTTATGCTTGCATATAGTCCCGAACCCGATGAATAGGTTAATAGTTAGTGTTCCTATAAGCTTTATGATGAGCCTTCTGGATTTTGAATTGTTTGAACAGGTTCCTAATATGGGAAGATGAAACAAACGAGCAGTTTGTCTTTTGAGTTTTAAAATCATTTTATCTTTTACTGGTTACTGAAGTCTTTTCTTTGTTATTCTTCGAATAAATTTTAAACTTCTATTTCAATATATCAACATATATAATCTGAAATACTATTGATTGAATTCGTTGAGGTCCTTGTAAAAAATCGATATTAGGTTTTTGAAAATCTGTGGATTATTGGGATGGAACCTCATGTCACTGTTATCAAAACAAGAAAAATCCTACTGAAGATTCTGAACCAATGTTCTTTAGAAGATTATTTGAGGTGTGGAGGAAGAAAGAAAGGAACCCTTCATGTTTTCAGGCTCTTCAGTTCCTAAGGAATGATGGAGGATAAATTCTGGGACATTACTAGAAATAGAATTAATTTCAGGACATGATTTAGACTTGAGAGTACTAAATTGCTTTCAATTGATTTACCTTTGAGGTTGTTAAATTGATGTCTGCTAAGATATTTTGTGAATTGTTGGCACAAAGTCTGGATCTTAAAGAAGATGATATTCTTGATTTAGGTTTCATCCTGCTTGTATTGAAATGACTGCAGAAGAAGCTAAAAAACTTGACCACTTCTTCTGTGAAAGTTGTTCTTCAGAGGGTCAAAAGAAGTTGCAGAATTCACAGTCTACATCTAAAGTTGCAGAGACAAAGGTAAGTGACGCTGTTGAAAATAAATGCTCTTCGTTGAATGTCATTGTTCGAATTTTTTTGTTTTGATCAAACTGCATAATCTAATTCCACGTTGTGATATTTTAAACACCCCTGTTTCATAGATCCTTAAGGTAGCAGGTCTCAGTCATGTCATCCACATAACTTTTTAGTTTTTGGTTGAAGAAGTTCATTCTTATCTTTAGGCATTTCTTCCTCATTTGGTTGGTACTGTAGGTAGCATAAATTATGGGGAATGAAAGAGTTAAATGAGCATCATGAGGAAGTCATATTGCTTAAGTAGAAGCTAACTTAGGCAACCGTGGCTTACAAAAAAATGGGTCAAGCTCTAGCGGTCACCTACTTAAGACTTAATATCTTATAAGTTTCCTTGACAACCAACGTATTAGTAATATCATGCAGTTGTAAGTGTGCACAAGCTAGTGTGAACGCTCGTTGGTATATAAGGAAAAAAAGAAAAACATGTAAGTTTTATTAGCTGCATACGAGTCAGATTACTTGGTTCGAGTGCTTGTTTTTGTAGTTTTTACCAAGCTTATATCGTGGTATTATAGTGTGATAATTGTAAGGGATGAATGGCTGTGACTTTCTTGCTCTTGGATTATGGTTGTCCTCATGATGAATGATATGTTTTAATGCTATTTCAGGTGGATACAAAACGACGCCGGAGGTGACGATAGTGTAAATAAACAAAATACGGTGACTTAGAGTTGTTAAGAACCAACCAGAGCTTCTAACTTTCTAATGAGTTGGAACAAGTGCATAGATGTAGGATAATGTAAATACTAGCTCTAGTGTGTTCAACATTCATTGAAGCAAGTAGAGAGATTGGTTTGAAATGTATTGAAGTTATTTTATCTCAAATGGAGCAAACCAAACCAAAGCCCCCCTTTCTTCTGTGAAGGTTGCAAATTTGTTTCATTTCCTCAAAACTCCTAAATTTTTAACTGTTTTGGAATCCATTTTTCTAATTATTCTTAGCTGATGCTGATGTATAGGTGAAATATCTGTCAAGAACAGTAGGAAAGAGATTTTTATGTAATTATTTGGTTGCAAGTTAATTGGACTGGGCTTCATTAGACTGGCTACTTATTGTGTCCCAACCTTTCCCTTGTAGAAGTTTTAGTTGGATTTTGATTGCTCCATGTTCCTTTTTATTTCTCATCAAATAAATGACATCTTCTTCTCG

mRNA sequence

AAGGTAGGTGTAGCCCAACTCTAATTAGTAAAAATAAAATTTTTACAAAATCAAAAAGAAAAAAAAAGTGGAAAAAAAAATCTTCACCAATGACTGTTACAAAAATCTGCCCTCATTTGCTCCACCGTCGCTTAGTAATATTGGCTTTGGCATATGCCGCCACGTGACAACCAAATCCACTCCTCCGCCGGACATTTTCCCCTTTTCACTGCCACCGATCACCCTGCAGGGCTCCTTTTTCATGGCCAAACCCAAGGCTCCGAGACAAACCCTAGATTCTTACACTGTCAAACGCATCAACAAAACCATTAAAGCCGGCGATTGCGTGCTTATGAGGCCCTCCGAACCCTCGAAGCCGTCGTATGTTGCTAAGATTGAGAAGATTGAGGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGCCGGAGGAATCAATTGGCGGTCGTAGACAGTTTCATGGCTCGAAGGAGTTGTTTCTCTCCGACCATTATGACGTTCAAAGCGCCGACACCATCGAGGGCAAGTGTACGGTGCATACGTTTAAGAATTATACCAAGCTTGATGCCGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCACTACTGGAGCTTTCAATCCCGATCGAGTGGCTGTGTATTGCAAGTGTGAGATGCCTTATAATCCCGACGACCTAATGGTTCAATGTGAGAGCTGCAGTGATTGGTTTCATCCTGCTTGTATTGAAATGACTGCAGAAGAAGCTAAAAAACTTGACCACTTCTTCTGTGAAAGTTGTTCTTCAGAGGGTCAAAAGAAGTTGCAGAATTCACAGTCTACATCTAAAGTTGCAGAGACAAAGGCATTTCTTCCTCATTTGGTTGGTACTGTAGGTGGATACAAAACGACGCCGGAGGTGACGATAGTGTAAATAAACAAAATACGGTGACTTAGAGTTGTTAAGAACCAACCAGAGCTTCTAACTTTCTAATGAGTTGGAACAAGTGCATAGATGTAGGATAATGTAAATACTAGCTCTAGTGTGTTCAACATTCATTGAAGCAAGTAGAGAGATTGGTTTGAAATGTATTGAAGTTATTTTATCTCAAATGGAGCAAACCAAACCAAAGCCCCCCTTTCTTCTGTGAAGGTTGCAAATTTGTTTCATTTCCTCAAAACTCCTAAATTTTTAACTGTTTTGGAATCCATTTTTCTAATTATTCTTAGCTGATGCTGATGTATAGGTGAAATATCTGTCAAGAACAGTAGGAAAGAGATTTTTATGTAATTATTTGGTTGCAAGTTAATTGGACTGGGCTTCATTAGACTGGCTACTTATTGTGTCCCAACCTTTCCCTTGTAGAAGTTTTAGTTGGATTTTGATTGCTCCATGTTCCTTTTTATTTCTCATCAAATAAATGACATCTTCTTCTCG

Coding sequence (CDS)

ATGGCCAAACCCAAGGCTCCGAGACAAACCCTAGATTCTTACACTGTCAAACGCATCAACAAAACCATTAAAGCCGGCGATTGCGTGCTTATGAGGCCCTCCGAACCCTCGAAGCCGTCGTATGTTGCTAAGATTGAGAAGATTGAGGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGCCGGAGGAATCAATTGGCGGTCGTAGACAGTTTCATGGCTCGAAGGAGTTGTTTCTCTCCGACCATTATGACGTTCAAAGCGCCGACACCATCGAGGGCAAGTGTACGGTGCATACGTTTAAGAATTATACCAAGCTTGATGCCGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCACTACTGGAGCTTTCAATCCCGATCGAGTGGCTGTGTATTGCAAGTGTGAGATGCCTTATAATCCCGACGACCTAATGGTTCAATGTGAGAGCTGCAGTGATTGGTTTCATCCTGCTTGTATTGAAATGACTGCAGAAGAAGCTAAAAAACTTGACCACTTCTTCTGTGAAAGTTGTTCTTCAGAGGGTCAAAAGAAGTTGCAGAATTCACAGTCTACATCTAAAGTTGCAGAGACAAAGGCATTTCTTCCTCATTTGGTTGGTACTGTAGGTGGATACAAAACGACGCCGGAGGTGACGATAGTGTAA

Protein sequence

MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQSTSKVAETKAFLPHLVGTVGGYKTTPEVTIV

Homology

[Close]

BLAST of Lsi11G011250 vs. ExPASy Swiss-Prot
Match: Q9FEN9 (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-87
Identity = 149/208 (71.63%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV 
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGKC VH+F +YTKLD+VGNDD+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           FCRF+YNSTTGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+WFHP+CI  T EEAKK D
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPD 180

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 209
           +F+CE CS + Q+ L NS STS   + K
Sbjct: 181 NFYCEECSPQ-QQNLHNSNSTSNNRDAK 207

[Close]

BLAST of Lsi11G011250 vs. ExPASy Swiss-Prot
Match: F4JL28 (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 3.5e-86
Identity = 148/211 (70.14%), Postives = 172/211 (81.52%), Query Frame = 0


Query: 2   AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHV 61
           +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH 
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARN-NVKVHC 69

Query: 62  RWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYF 121
           RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC VHTFKNYT+L+ VG +DY+
Sbjct: 70  RWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYY 129

Query: 122 CRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDH 181
           CRF+Y + TGAF PDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ MT EEAKKLDH
Sbjct: 130 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 189

Query: 182 FFCESCSSEGQ-KKLQNSQSTSKVAETKAFL 212
           F C  CSS+   KK QN  ++S   + K  L
Sbjct: 190 FVCAECSSDDDVKKSQNGFTSSPADDVKVRL 219

[Close]

BLAST of Lsi11G011250 vs. ExPASy Swiss-Prot
Match: F4JGB7 (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 2.5e-63
Identity = 121/199 (60.80%), Postives = 145/199 (72.86%), Query Frame = 0


Query: 26  GDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFL 85
           GDCVLMRPS+  K  YVA++EKIEAD+R  NVKVH RWYY PEES GGRRQ HG+KELFL
Sbjct: 43  GDCVLMRPSDAGKAPYVARVEKIEADARN-NVKVHCRWYYCPEESHGGRRQLHGAKELFL 102

Query: 86  SDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCE 145
           SDH+DVQSA TIEGKC VHTFKNYT+L+ VG +DY+C FDY + TGAF PDRVAVY KCE
Sbjct: 103 SDHFDVQSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCE 162

Query: 146 MPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSS--EGQKKLQNSQSTSK 205
           MPYN D+LM +   C    H AC+ +T EEAKKL+HF C  CSS  +G K+ QN  ++S 
Sbjct: 163 MPYNSDELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASST 222

Query: 206 VAETKAFLPHLVGTVGGYK 223
             + K     ++     Y+
Sbjct: 223 TNDLKPSAEKMIDVRASYE 239

[Close]

BLAST of Lsi11G011250 vs. ExPASy Swiss-Prot
Match: Q9P281 (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC1 PE=1 SV=4)

HSP 1 Score: 67.4 bits (163), Expect = 2.4e-10
Identity = 44/134 (32.84%), Postives = 67/134 (50.00%), Query Frame = 0


Query: 16   VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGR 75
            + R  +T++ GDC V +    P+ P Y+ +IE +  +S G+N+ V V+W+Y PEE+  G+
Sbjct: 2508 IVRGEETLRVGDCAVFLSAGRPNLP-YIGRIESM-WESWGSNMVVKVKWFYHPEETKLGK 2567

Query: 76   RQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAV-----GNDDYFCRFDYNST 135
            RQ  G   L+ S H D     TI  KC V   + Y ++          D Y+    Y+ T
Sbjct: 2568 RQCDGKNALYQSCHEDENDVQTISHKCQVVAREQYEQMARSRKCQDRQDLYYLAGTYDPT 2627

Query: 136  TGAF-NPDRVAVYC 143
            TG     D V + C
Sbjct: 2628 TGRLVTADGVPILC 2639

[Close]

BLAST of Lsi11G011250 vs. ExPASy Swiss-Prot
Match: Q3UHR0 (BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahcc1 PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 5.4e-10
Identity = 45/134 (33.58%), Postives = 67/134 (50.00%), Query Frame = 0


Query: 16   VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGR 75
            + R  +T++ GDC V +    P+ P Y+ +IE +  +S G+N+ V V+W+Y PEE+  G+
Sbjct: 2512 IVRGKETLRIGDCAVFLSAGRPNLP-YIGRIESL-WESWGSNMVVKVKWFYHPEETKLGK 2571

Query: 76   RQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKL-----DAVGNDDYFCRFDYNST 135
            RQ  G   L+ S H D     TI  KC V   + Y ++          D Y+    Y+ T
Sbjct: 2572 RQSDGKNALYQSCHEDENDVQTISHKCQVVGREQYEQMMRGRKYQDQQDLYYLAGTYDPT 2631

Query: 136  TGAF-NPDRVAVYC 143
            TG     D V V C
Sbjct: 2632 TGRLVTADGVPVLC 2643

[Close]

BLAST of Lsi11G011250 vs. ExPASy TrEMBL
Match: A0A1S3BJS6 (chromatin remodeling protein SHL-like OS=Cucumis melo OX=3656 GN=LOC103490361 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 6.2e-118
Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRG NVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGGNVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGKCTVHTFKNYTKLDAVGNDDY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD
Sbjct: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 209
           HF+CESCSSEGQKKLQNSQSTSKVAETK
Sbjct: 181 HFYCESCSSEGQKKLQNSQSTSKVAETK 208

[Close]

BLAST of Lsi11G011250 vs. ExPASy TrEMBL
Match: A0A0A0K4E7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004100 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.4e-117
Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGKCTVHTFKNYTKLDAVGNDDY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCE+CSDWFHPACIEMT EEAKKLD
Sbjct: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 209
           HF+CESCSSEGQKKLQNSQSTSKVAETK
Sbjct: 181 HFYCESCSSEGQKKLQNSQSTSKVAETK 208

[Close]

BLAST of Lsi11G011250 vs. ExPASy TrEMBL
Match: A0A6J1C3P9 (chromatin remodeling protein SHL-like OS=Momordica charantia OX=3673 GN=LOC111007651 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 2.9e-115
Identity = 198/208 (95.19%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTI+AGDCVLMRPSEPSKPSYVAK+EKIEADSRGANVKVH
Sbjct: 29  MAKPKAPRQTLDSYTVKRINKTIRAGDCVLMRPSEPSKPSYVAKVEKIEADSRGANVKVH 88

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKE+FLSDH+DVQSADTIEGKCTVHTFK+YTKLDAVGNDDY
Sbjct: 89  VRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSADTIEGKCTVHTFKSYTKLDAVGNDDY 148

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           FCRF+YNS+TGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMT EEAKKLD
Sbjct: 149 FCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTVEEAKKLD 208

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 209
           HFFCESCSSEGQKKLQNSQSTS++AETK
Sbjct: 209 HFFCESCSSEGQKKLQNSQSTSRLAETK 236

[Close]

BLAST of Lsi11G011250 vs. ExPASy TrEMBL
Match: A0A6J1EAH8 (chromatin remodeling protein SHL-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432345 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.1e-114
Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGN+DY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNEDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           F RFDYNS TGAF PDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEM+AE+AKKLD
Sbjct: 121 FSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLD 180

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 209
           HFFCESCS EGQKKLQNSQSTSK+AETK
Sbjct: 181 HFFCESCSPEGQKKLQNSQSTSKIAETK 208

[Close]

BLAST of Lsi11G011250 vs. ExPASy TrEMBL
Match: A0A6J1IJS1 (chromatin remodeling protein SHL-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474291 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.1e-113
Identity = 199/211 (94.31%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRP EPSKPSYVAKIEKIEADSRGANVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPPEPSKPSYVAKIEKIEADSRGANVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           +RWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVH+FK+YTKLDAVGN+DY
Sbjct: 61  IRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHSFKSYTKLDAVGNEDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           FCRFDY+STTGAFNPDRVAVYCKCEMPYNPDDLMVQCESC+DWFHPACIEMTAEEAKKLD
Sbjct: 121 FCRFDYSSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCTDWFHPACIEMTAEEAKKLD 180

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETKAFL 212
           HFFCESCSSE Q KLQ+SQSTSK AETK FL
Sbjct: 181 HFFCESCSSEDQ-KLQSSQSTSKFAETKVFL 210

[Close]

BLAST of Lsi11G011250 vs. NCBI nr
Match: XP_038889039.1 (chromatin remodeling protein SHL-like [Benincasa hispida])

HSP 1 Score: 435.3 bits (1118), Expect = 3.4e-118
Identity = 206/208 (99.04%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAK+EKIEADSRGANVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKVEKIEADSRGANVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           FCRFDYNSTTGAF+PDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD
Sbjct: 121 FCRFDYNSTTGAFSPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 209
           HFFCESCSSEGQKKLQNSQSTSKVAETK
Sbjct: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 208

[Close]

BLAST of Lsi11G011250 vs. NCBI nr
Match: XP_008448075.2 (PREDICTED: chromatin remodeling protein SHL-like [Cucumis melo])

HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-117
Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRG NVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGGNVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGKCTVHTFKNYTKLDAVGNDDY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD
Sbjct: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 209
           HF+CESCSSEGQKKLQNSQSTSKVAETK
Sbjct: 181 HFYCESCSSEGQKKLQNSQSTSKVAETK 208

[Close]

BLAST of Lsi11G011250 vs. NCBI nr
Match: XP_011658548.1 (chromatin remodeling protein SHL [Cucumis sativus] >XP_031745187.1 chromatin remodeling protein SHL [Cucumis sativus] >KGN43157.1 hypothetical protein Csa_020264 [Cucumis sativus])

HSP 1 Score: 432.2 bits (1110), Expect = 2.8e-117
Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGKCTVHTFKNYTKLDAVGNDDY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCE+CSDWFHPACIEMT EEAKKLD
Sbjct: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 209
           HF+CESCSSEGQKKLQNSQSTSKVAETK
Sbjct: 181 HFYCESCSSEGQKKLQNSQSTSKVAETK 208

[Close]

BLAST of Lsi11G011250 vs. NCBI nr
Match: XP_022135772.1 (chromatin remodeling protein SHL-like [Momordica charantia])

HSP 1 Score: 424.5 bits (1090), Expect = 5.9e-115
Identity = 198/208 (95.19%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTI+AGDCVLMRPSEPSKPSYVAK+EKIEADSRGANVKVH
Sbjct: 29  MAKPKAPRQTLDSYTVKRINKTIRAGDCVLMRPSEPSKPSYVAKVEKIEADSRGANVKVH 88

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKE+FLSDH+DVQSADTIEGKCTVHTFK+YTKLDAVGNDDY
Sbjct: 89  VRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSADTIEGKCTVHTFKSYTKLDAVGNDDY 148

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           FCRF+YNS+TGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMT EEAKKLD
Sbjct: 149 FCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTVEEAKKLD 208

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 209
           HFFCESCSSEGQKKLQNSQSTS++AETK
Sbjct: 209 HFFCESCSSEGQKKLQNSQSTSRLAETK 236

[Close]

BLAST of Lsi11G011250 vs. NCBI nr
Match: XP_022924958.1 (chromatin remodeling protein SHL-like isoform X1 [Cucurbita moschata] >XP_022924967.1 chromatin remodeling protein SHL-like isoform X1 [Cucurbita moschata] >XP_023529358.1 chromatin remodeling protein SHL-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6588431.1 Chromatin remodeling protein SHL, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 420.6 bits (1080), Expect = 8.6e-114
Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGN+DY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNEDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           F RFDYNS TGAF PDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEM+AE+AKKLD
Sbjct: 121 FSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLD 180

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 209
           HFFCESCS EGQKKLQNSQSTSK+AETK
Sbjct: 181 HFFCESCSPEGQKKLQNSQSTSKIAETK 208

[Close]

BLAST of Lsi11G011250 vs. TAIR 10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 324.3 bits (830), Expect = 7.8e-89
Identity = 149/208 (71.63%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV 
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGKC VH+F +YTKLD+VGNDD+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180
           FCRF+YNSTTGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+WFHP+CI  T EEAKK D
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPD 180

Query: 181 HFFCESCSSEGQKKLQNSQSTSKVAETK 209
           +F+CE CS + Q+ L NS STS   + K
Sbjct: 181 NFYCEECSPQ-QQNLHNSNSTSNNRDAK 207

[Close]

BLAST of Lsi11G011250 vs. TAIR 10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 319.3 bits (817), Expect = 2.5e-87
Identity = 148/211 (70.14%), Postives = 172/211 (81.52%), Query Frame = 0


Query: 2   AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHV 61
           +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH 
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARN-NVKVHC 69

Query: 62  RWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYF 121
           RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC VHTFKNYT+L+ VG +DY+
Sbjct: 70  RWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYY 129

Query: 122 CRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDH 181
           CRF+Y + TGAF PDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ MT EEAKKLDH
Sbjct: 130 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 189

Query: 182 FFCESCSSEGQ-KKLQNSQSTSKVAETKAFL 212
           F C  CSS+   KK QN  ++S   + K  L
Sbjct: 190 FVCAECSSDDDVKKSQNGFTSSPADDVKVRL 219

[Close]

BLAST of Lsi11G011250 vs. TAIR 10
Match: AT4G22140.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 318.9 bits (816), Expect = 3.3e-87
Identity = 147/208 (70.67%), Postives = 171/208 (82.21%), Query Frame = 0


Query: 2   AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHV 61
           +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH 
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARN-NVKVHC 69

Query: 62  RWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYF 121
           RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC VHTFKNYT+L+ VG +DY+
Sbjct: 70  RWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYY 129

Query: 122 CRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDH 181
           CRF+Y + TGAF PDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ MT EEAKKLDH
Sbjct: 130 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 189

Query: 182 FFCESCSSEGQ-KKLQNSQSTSKVAETK 209
           F C  CSS+   KK QN  ++S   + K
Sbjct: 190 FVCAECSSDDDVKKSQNGFTSSPADDVK 216

[Close]

BLAST of Lsi11G011250 vs. TAIR 10
Match: AT4G39100.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 278.9 bits (712), Expect = 3.8e-75
Identity = 124/163 (76.07%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60
           M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV 
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGKC VH+F +YTKLD+VGNDD+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDW 164
           FCRF+YNSTTGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+W
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEW 163

[Close]

BLAST of Lsi11G011250 vs. TAIR 10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 231.9 bits (590), Expect = 5.3e-61
Identity = 116/194 (59.79%), Postives = 140/194 (72.16%), Query Frame = 0


Query: 31  MRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYD 90
           MRPS+  K  YVA++EKIEAD+R  NVKVH RWYY PEES GGRRQ HG+KELFLSDH+D
Sbjct: 1   MRPSDAGKAPYVARVEKIEADARN-NVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFD 60

Query: 91  VQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNP 150
           VQSA TIEGKC VHTFKNYT+L+ VG +DY+C FDY + TGAF PDRVAVY KCEMPYN 
Sbjct: 61  VQSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNS 120

Query: 151 DDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSS--EGQKKLQNSQSTSKVAETK 210
           D+LM +   C    H AC+ +T EEAKKL+HF C  CSS  +G K+ QN  ++S   + K
Sbjct: 121 DELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDLK 180

Query: 211 AFLPHLVGTVGGYK 223
                ++     Y+
Sbjct: 181 PSAEKMIDVRASYE 192

The following BLAST results are available for this feature:

BLAST of Lsi11G011250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FEN9	1.1e-87	71.63	Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=...	[more]
F4JL28	3.5e-86	70.14	Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=...	[more]
F4JGB7	2.5e-63	60.80	Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04...	[more]
Q9P281	2.4e-10	32.84	BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC...	[more]
Q3UHR0	5.4e-10	33.58	BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahc...	[more]

BLAST of Lsi11G011250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJS6	6.2e-118	98.56	chromatin remodeling protein SHL-like OS=Cucumis melo OX=3656 GN=LOC103490361 PE...	[more]
A0A0A0K4E7	1.4e-117	98.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004100 PE=4 SV=1	[more]
A0A6J1C3P9	2.9e-115	95.19	chromatin remodeling protein SHL-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1EAH8	4.1e-114	95.67	chromatin remodeling protein SHL-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1IJS1	2.1e-113	94.31	chromatin remodeling protein SHL-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Lsi11G011250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889039.1	3.4e-118	99.04	chromatin remodeling protein SHL-like [Benincasa hispida]	[more]
XP_008448075.2	1.3e-117	98.56	PREDICTED: chromatin remodeling protein SHL-like [Cucumis melo]	[more]
XP_011658548.1	2.8e-117	98.08	chromatin remodeling protein SHL [Cucumis sativus] >XP_031745187.1 chromatin rem...	[more]
XP_022135772.1	5.9e-115	95.19	chromatin remodeling protein SHL-like [Momordica charantia]	[more]
XP_022924958.1	8.6e-114	95.67	chromatin remodeling protein SHL-like isoform X1 [Cucurbita moschata] >XP_022924...	[more]

BLAST of Lsi11G011250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39100.1	7.8e-89	71.63	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G22140.1	2.5e-87	70.14	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G22140.2	3.3e-87	70.67	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G39100.2	3.8e-75	76.07	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G04260.1	5.3e-61	59.79	Bromo-adjacent homology (BAH) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 141..188 e-value: 9.8E-9 score: 45.0
IPR001025	Bromo adjacent homology (BAH) domain	SMART	SM00439	BAH_4	coord: 21..137 e-value: 2.6E-43 score: 159.9
IPR001025	Bromo adjacent homology (BAH) domain	PFAM	PF01426	BAH	coord: 22..136 e-value: 4.3E-23 score: 81.5
IPR001025	Bromo adjacent homology (BAH) domain	PROSITE	PS51038	BAH	coord: 21..137 score: 23.923931
IPR043151	Bromo adjacent homology (BAH) domain superfamily	GENE3D	2.30.30.490		coord: 2..135 e-value: 3.7E-33 score: 116.7
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 141..189 e-value: 6.9E-10 score: 38.7
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 139..190 score: 9.223
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 136..203 e-value: 1.9E-19 score: 70.9
None	No IPR available	PANTHER	PTHR46364:SF7	CHROMATIN REMODELING PROTEIN SHL	coord: 1..209
None	No IPR available	PANTHER	PTHR46364	OS08G0421900 PROTEIN	coord: 1..209
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 142..187
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 131..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G011250.1	Lsi11G011250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0035067	negative regulation of histone acetylation
biological_process	GO:2000028	regulation of photoperiodism, flowering
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0035064	methylated histone binding
molecular_function	GO:0000976	transcription cis-regulatory region binding