Lsi11G011160 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CATTATTTACCTTGTTTGCTTCATTTGTTGGTTCTCTTCTCCATTATTTATTGTATAATTCTCTGTGCATTTCTTGACCTAAAATTTGATTCTAATGGCAACCAAAAGCAAGATCTTGATTGTTGGAGGGACTGGCTATGTTGGTAAGTTTATGGTGGAGGCAAGTGCCAAGGCTGGCCATCCAACCTATGTTCTTCTTCGAGATTCCACTCTCTCCAACCATTCCAAGTCTCATATTATCAACAACTTCAAGAGCTTGGGAGTCCATTTTCTCTCTGTAAGTCTATTTTTACCGTCTTCGTTTTTCGTCGTCGGGCCTCTATAATTCGATTCACCATTCTTGGATTGAATTACCTTTTTTAAAACATTTTATTTTGACAATATTAATGGTGGGAGGAATTGAACCTCTAACCTCGAGATCGTAAATATAAGCTTCATGAGAGTTGAGCTAACCTAAAAATAGTTGGATGTTGTCCTTTGCATGTATATTCATGATCCTCTTCGATCGAAGTACAATTAAGCCCCCGAGGTTACTCTTATCTAGGTCAACTTATTTTTAGACATTGTGTGTAGAGACCACTCGACCCAACTTGACGGTTAGGCGAAATTTCTTTTGTGAGCCTTTAGATTTTTATAAGGGCAATTTGAAAATCGAGGGAAGTGAGAGCTGTAACGACCTGATTTTTCAAAATTTCTAACTGAAATCATTACTACATGCATGCAGTTTCAAAACCAAATCTAGTTAATTATTGAAAACTTAAAATATATATTTTTTTAAATAAATAAAACATTGTCAAGACCTTTTAATAACAAAACTAAAACAAAGCTTTAGTTTGAGATTTCTAAAATTTTATTTGAAAAGAAACATTTAAATTTTAAAGCCGCTAAACTTTCAATGGTTCTCATTAATACGTTTGAAACATCTTTAAAATACTACACTAAGCAAAAGCATTTTCACTAGTTCCTTGACACCATCAATAGATCTCTTCATCAAGTGTCTGATATATTTTCTTACCTGAAAAATATTTTAAGAAAAGAATGAATATTGAAAAAAACTCAGTTACTAAGCTCACTACTCGGGTCAGGCTATGCAATCACATGCAATCATGAGTTTGAAAATCATTAAAATTAGTGGAACCTAAAAGTTAGCTAAATTCGATCTGCCAAAACGGTGTCATATGCCTTTTCAGGCGAAATCATGTCATGTATCGTTTTACGCTAATTGTGTCATGTGGCATTCCAAACTAATTGTGTCATGTGCCTTTTTAGACTAATCATATCATGTGCGTGGAAGACTACGACATGTGCGTTTTCAAGCTAATCATTTCATAGTTTATCAAATTTAAATTTTCATGTAACACATACATGCAGGCCCCACATAAAAACACATGCAATCGCACTAATTCATTCTAATTCTAAATTCTAACTCCCAATAAGATTTTCTAATTTAAACTCCCAATTTATATATATATATATATATATATACATATATATATTCCACAAATTTAATTATCTTCACATAATCGAATTAAATCTATTTTACTCAAATTATAATCTAAGCAACATATTAAAACACCCAAATCAAATCCAAATTAATCAGACTGATAAAATCTAAATCAAAACCTTCAAAAGAATTAAATTAATTTCATCTTAAAAATTTGGAGCATTACAAGGGCAATTTGGATATTTTAAAAATAAAGAGAATGTTATATCCTCTATTTAGATACCCATAATCTCCCTTTTCTTCTTGGCAATGTGAAAATTGTTCACAATTTTTTTCTTTTTTTTTTTTTTGAAAATTGCAGTTTTTCTCAGTTAATTTACAAAGTTAGTTCAAATTTTGAATGTTGTATTTATTTAGTCTTTAAATTTTGATAATTTTAAAAATTAAGAAATCTATAGTAAACACAAAATTAAAAATATATTATTTCATTAGACATTAATTTCAAAATTATAACGAATATAGACCAATTATTTCATAACTAACTTTAAAATTCTGACTAACCTATTAAACATAAAATTGAAAGTTTAAGAGATGAATTATACATACCCTTTGAAAATTTAAGGATAAAAAAAATACAAATATCAAATTTTAGGACTAAACTTGTAAATTTTAATTTTTTTTTTTCATTTCTACACTTTATGCAAATTATTAAATAGATCTTTTGACTTTTGTGCAGGGTGATCTCTATGATCATGAGAGTTTAGTTAAGGCAATTAAAGAGGTGGAGGTGGTGATATCTACAGTAGGCCATAATCAGTTAGCTGACCAATATACACTTATCTCTGCCATCAAAGAAGCTGGCCATGTTAAGGTTATACTTATTTTCTTTGCAAAATTACTTTTTTAGCCTCCAAATTTTGAGTAATATGTTCGTTTGATCCTTAAATTTAAAAAATGTATCTTTTTTGTCCCTAAGTATATAAAAATATATAGGTTCATTTGGTCTCTATGTTTTCATAATGTACTTTTTTAGTCTCTAAAATTTTAAAAATAAATTTAAGAGGTCTCTCAAATAATTTATTATTATTATTTTAAATAATTATATGACATTTTAAATTAGAAGAATAATAATTTTTAAGAACCATCTCCTTTTTTAAACTATTTTTTTTTCTAATTTTAAATATCATATAATTATTTTAGAAAAATCAAAGAAAAAATATTGAAAGACCTTTTAAACCTATTTTAAAAAACTCAGGAACTGAAAAAATATATTTTGAAAATTCAAGAACCAAATGAATCTACTCTTATAAATTTAGGACTAAAAAGGTATATTTTTAAAATTCAAAGACTAAACACACATATTATTTAAAACTTAGGATTAAAAAGGTAATTTTTCTTAGTTTTTTTACTTTTTTTTAATCTTTGTTTATTTATGCAATAAAGTATCTTTAAAAAAAAGTTTCAAATGATGAGTTTTGGAGCGAATAAAAGTCAATTTAAGAAAGATTTGTGTGTGGCTTAAATGAACTATACAGACTCGATTGAAACTTTTTAATACACAAAAGTTAGATCAAACTAAGTGGAAAGACATTAAATTGAAAATTATTTTAAAGTTAGGGATCAAATTGAAACTAAATCGAAACTATAAAATTAACTTTGACTTATTAAAAGCTTAAAAGAATATTTAATGATTATTTTAAACACAAGTTTATATATATAGCGAGAAAAATGGAAAAATTCAAGGTTCCAAGTAATAATTGCTACGTGTTATTAGTCTTAGTTTGGAATTGTAACTTCAAAAATAATTGCTTGCAAAGTGATTTTTTTAAAAAATTGCTATGACATGAAGTAAAAAATTAGGAGAGAAATAGTCAATATATCTTTTAAAAATGGTGTGATCGTTCCTCAACATGCATGTCGTTTCAAGATGGTCTTTTTTTTTTTTTACCAAATACTTTTTTGAGCTTCATGAGCTCTAATGTCATATTAGATAAACATGGGATTTCATCTCACAACTAAATTAGCAATGAGATGAGTAACATGTATAATGATCTTATAAAGATTTGTGAGACCTCTCAATTTTTTGAACATGGGATCCTTAACATGCCCCTTGAAGATGGTACCATTTCGTATTCACCATTCTTGGACCGTGTTGTGCACAGGTGTCTCACCACCTGCATATTATCTCTATATTTTGTACTAGTTGTTCCTTCTCAAGTTATAAGAAACTATTTCTCTCCTCTACCCATAGATGTAGCTAACTAAACACACACTATTAGTGTACAACAATGTGCGTTTAGGGTGTAGCTAACTACCTGCATATTATATCTATATTTTGTACTATTTGTTGCTCCTCGTGATATAAGAAACTGTTTCTCTCCTCTACCTTAGATGTAGCTAACTAAACGCACATTGTTAGTGAACAACATAAATTTATGTGTTGTATGTCCTTATTCTTTATTCATGGCTTGTGGATGTATTTTTTTTCAAAACAAACAAAATCTCAAGTTTTTTATTCTTTTTTACCGAATGCTCGTCTAGACTTTATAAACTTTTTATACATATTACATAAACATGTGAGGTTCTATCTCAAAACAAATTAGCTAAAGGAGAAGTAGTCCATGTATCTCAAAACATGGATTCTATCTAATTTCCATCATTTTAGATCATGAATGAAGGAATTTTTACATATCAATCATGTTGGAATGCATTAATTTATTATCTTGCGGTTTGAATGACCTAAGTTATTTACGTATTTGTCATCTTTACATTATTTATATTTCTGACCCTAGAGTTTAGAAAAGTGTGCTATATAAACTCTCTAATCCTATATGTGCATTTGTAATTCTCTCTAATAAAGTTGTTCTCTCTGTGCCCCGTGGATGTAGCTAACATATATGTTAGTGAATCACGTAAATCTGTGTATTGATTCTTTAATGTTCATCTTTATTTGTCGATTTCATAACAAATCTTAAAGAATTCTTCATGTCTTTAATTGTTTGTATTGTTTAAGAGATTCTTGCCATCAGAATTTGGGAATGATGTGGATCGTGTGCGTGGTGTTGAGCCAGCAAAATCAGCCTTTGCTGCAAAGGCTCAAATTCGTAGAGCTTTGGAGGGTTCAGGAATTCCCTATACCATTGTTTCCTCTAATTTCTTTGCTGGTTGGTTCCTTCCAAGTTTGGCTCAGCCTCAACCTTCTACTCCACCTATTCCACCTAGAGATAAAGTTATTGTCATTGGAGATGGAAATCCCAAAGGTAATAATTAA CATTATTTACCTTGTTTGCTTCATTTGTTGGTTCTCTTCTCCATTATTTATTGTATAATTCTCTGTGCATTTCTTGACCTAAAATTTGATTCTAATGGCAACCAAAAGCAAGATCTTGATTGTTGGAGGGACTGGCTATGTTGGTAAGTTTATGGTGGAGGCAAGTGCCAAGGCTGGCCATCCAACCTATGTTCTTCTTCGAGATTCCACTCTCTCCAACCATTCCAAGTCTCATATTATCAACAACTTCAAGAGCTTGGGAGTCCATTTTCTCTCTGGTGATCTCTATGATCATGAGAGTTTAGTTAAGGCAATTAAAGAGGTGGAGGTGGTGATATCTACAGTAGGCCATAATCAATTCTTGCCATCAGAATTTGGGAATGATGTGGATCGTGTGCGTGGTGTTGAGCCAGCAAAATCAGCCTTTGCTGCAAAGGCTCAAATTCGTAGAGCTTTGGAGGGTTCAGGAATTCCCTATACCATTGTTTCCTCTAATTTCTTTGCTGGTTGGTTCCTTCCAAGTTTGGCTCAGCCTCAACCTTCTACTCCACCTATTCCACCTAGAGATAAAGTTATTGTCATTGGAGATGGAAATCCCAAAGGTAATAATTAA ATGGCAACCAAAAGCAAGATCTTGATTGTTGGAGGGACTGGCTATGTTGGTAAGTTTATGGTGGAGGCAAGTGCCAAGGCTGGCCATCCAACCTATGTTCTTCTTCGAGATTCCACTCTCTCCAACCATTCCAAGTCTCATATTATCAACAACTTCAAGAGCTTGGGAGTCCATTTTCTCTCTGGTGATCTCTATGATCATGAGAGTTTAGTTAAGGCAATTAAAGAGGTGGAGGTGGTGATATCTACAGTAGGCCATAATCAATTCTTGCCATCAGAATTTGGGAATGATGTGGATCGTGTGCGTGGTGTTGAGCCAGCAAAATCAGCCTTTGCTGCAAAGGCTCAAATTCGTAGAGCTTTGGAGGGTTCAGGAATTCCCTATACCATTGTTTCCTCTAATTTCTTTGCTGGTTGGTTCCTTCCAAGTTTGGCTCAGCCTCAACCTTCTACTCCACCTATTCCACCTAGAGATAAAGTTATTGTCATTGGAGATGGAAATCCCAAAGGTAATAATTAA MATKSKILIVGGTGYVGKFMVEASAKAGHPTYVLLRDSTLSNHSKSHIINNFKSLGVHFLSGDLYDHESLVKAIKEVEVVISTVGHNQFLPSEFGNDVDRVRGVEPAKSAFAAKAQIRRALEGSGIPYTIVSSNFFAGWFLPSLAQPQPSTPPIPPRDKVIVIGDGNPKGNN Homology
BLAST of Lsi11G011160 vs. ExPASy Swiss-Prot
Match: O81355 (Phenylcoumaran benzylic ether reductase Pyrc5 OS=Pyrus communis OX=23211 GN=PYRC5 PE=1 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.2e-61 Identity = 121/188 (64.36%), Postives = 147/188 (78.19%), Query Frame = 0
BLAST of Lsi11G011160 vs. ExPASy Swiss-Prot
Match: B9HRL7 (Phenylcoumaran benzylic ether reductase POP1 OS=Populus trichocarpa OX=3694 GN=PCBER PE=1 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 6.5e-61 Identity = 121/184 (65.76%), Postives = 142/184 (77.17%), Query Frame = 0
BLAST of Lsi11G011160 vs. ExPASy Swiss-Prot
Match: Q9FUW6 (Phenylcoumaran benzylic ether reductase Betv6 OS=Betula pendula OX=3505 GN=BETV6 PE=1 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 6.8e-58 Identity = 116/188 (61.70%), Postives = 139/188 (73.94%), Query Frame = 0
BLAST of Lsi11G011160 vs. ExPASy Swiss-Prot
Match: B6VRE8 (Phenylcoumaran benzylic ether reductase TP7 OS=Nicotiana tabacum OX=4097 GN=TP7 PE=1 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 5.7e-57 Identity = 116/188 (61.70%), Postives = 138/188 (73.40%), Query Frame = 0
BLAST of Lsi11G011160 vs. ExPASy Swiss-Prot
Match: Q9T030 (Phenylcoumaran benzylic ether reductase 1 OS=Arabidopsis thaliana OX=3702 GN=PCBER1 PE=1 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 1.3e-56 Identity = 115/188 (61.17%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of Lsi11G011160 vs. ExPASy TrEMBL
Match: A0A5D3DFF3 (Isoflavone reductase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00340 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 6.8e-77 Identity = 151/190 (79.47%), Postives = 162/190 (85.26%), Query Frame = 0
BLAST of Lsi11G011160 vs. ExPASy TrEMBL
Match: A0A0A0K5N5 (NmrA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G002520 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 3.7e-75 Identity = 148/188 (78.72%), Postives = 158/188 (84.04%), Query Frame = 0
BLAST of Lsi11G011160 vs. ExPASy TrEMBL
Match: A0A1S3BIW8 (isoflavone reductase homolog OS=Cucumis melo OX=3656 GN=LOC103490368 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 3.7e-75 Identity = 148/188 (78.72%), Postives = 160/188 (85.11%), Query Frame = 0
BLAST of Lsi11G011160 vs. ExPASy TrEMBL
Match: A0A6P5XF66 (isoflavone reductase homolog OS=Durio zibethinus OX=66656 GN=LOC111282890 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 3.3e-63 Identity = 127/188 (67.55%), Postives = 151/188 (80.32%), Query Frame = 0
BLAST of Lsi11G011160 vs. ExPASy TrEMBL
Match: A0A6J1C331 (isoflavone reductase homolog OS=Momordica charantia OX=3673 GN=LOC111008009 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 4.3e-63 Identity = 131/188 (69.68%), Postives = 152/188 (80.85%), Query Frame = 0
BLAST of Lsi11G011160 vs. NCBI nr
Match: XP_038888580.1 (phenylcoumaran benzylic ether reductase Pyrc5-like [Benincasa hispida]) HSP 1 Score: 301.6 bits (771), Expect = 4.3e-78 Identity = 154/188 (81.91%), Postives = 162/188 (86.17%), Query Frame = 0
BLAST of Lsi11G011160 vs. NCBI nr
Match: KAA0055404.1 (isoflavone reductase-like protein [Cucumis melo var. makuwa] >TYK22324.1 isoflavone reductase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76 Identity = 151/190 (79.47%), Postives = 162/190 (85.26%), Query Frame = 0
BLAST of Lsi11G011160 vs. NCBI nr
Match: XP_008448083.1 (PREDICTED: isoflavone reductase homolog [Cucumis melo]) HSP 1 Score: 290.8 bits (743), Expect = 7.7e-75 Identity = 148/188 (78.72%), Postives = 160/188 (85.11%), Query Frame = 0
BLAST of Lsi11G011160 vs. NCBI nr
Match: XP_011658546.1 (phenylcoumaran benzylic ether reductase POP1 isoform X2 [Cucumis sativus]) HSP 1 Score: 290.8 bits (743), Expect = 7.7e-75 Identity = 148/188 (78.72%), Postives = 158/188 (84.04%), Query Frame = 0
BLAST of Lsi11G011160 vs. NCBI nr
Match: XP_004148524.1 (phenylcoumaran benzylic ether reductase Pyrc5 isoform X1 [Cucumis sativus] >KGN43146.1 hypothetical protein Csa_020152 [Cucumis sativus]) HSP 1 Score: 290.8 bits (743), Expect = 7.7e-75 Identity = 148/188 (78.72%), Postives = 158/188 (84.04%), Query Frame = 0
BLAST of Lsi11G011160 vs. TAIR 10
Match: AT4G39230.1 (NmrA-like negative transcriptional regulator family protein ) HSP 1 Score: 220.7 bits (561), Expect = 9.1e-58 Identity = 115/188 (61.17%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of Lsi11G011160 vs. TAIR 10
Match: AT1G75280.1 (NmrA-like negative transcriptional regulator family protein ) HSP 1 Score: 199.9 bits (507), Expect = 1.7e-51 Identity = 109/189 (57.67%), Postives = 130/189 (68.78%), Query Frame = 0
BLAST of Lsi11G011160 vs. TAIR 10
Match: AT1G75300.1 (NmrA-like negative transcriptional regulator family protein ) HSP 1 Score: 189.1 bits (479), Expect = 2.9e-48 Identity = 104/198 (52.53%), Postives = 130/198 (65.66%), Query Frame = 0
BLAST of Lsi11G011160 vs. TAIR 10
Match: AT1G75290.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 188.0 bits (476), Expect = 6.5e-48 Identity = 99/185 (53.51%), Postives = 124/185 (67.03%), Query Frame = 0
BLAST of Lsi11G011160 vs. TAIR 10
Match: AT1G19540.1 (NmrA-like negative transcriptional regulator family protein ) HSP 1 Score: 161.8 bits (408), Expect = 5.0e-40 Identity = 93/186 (50.00%), Postives = 114/186 (61.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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