Lsi11G009910 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi11G009910
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPHD finger protein EHD3-like
Locationchr11: 16585178 .. 16592630 (+)
RNA-Seq ExpressionLsi11G009910
SyntenyLsi11G009910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAATGCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGCCCCCCCCCCCCCCCCTCTTTCCCTCCCTCATCTTCTTCCTAAAACAGAAACCCATTTCTTCGACTATGACTAAGCAATGCCCACGCCCAGCCTTATGTTGTTCGCCGCTGCCCTCAGCCTTGTTGTCGACCACGCCTCAGTCCGAGGCTCTTCAACTACGACTAAGCAACGGTCACGCTCAACCTTGTCCCCGCTGCCCTCATCTTCTTCCCAGAATAGAAACCCATTTCTTCAAAGTGCCTTTTGGTGGATTGTATTTAGTGTCTTTATGTTAAATTTATATTTATATATGTAAAGAAAAAAATATAAAAAAATGACGTATCCTCGACGTATCCGTATCTTAGTTTTTTAGAAATTGACATATCACCGTGTCCTATCATATTCGTATCCCACATCCGTATCTGTGTCTGTGTTTCATAGCTAAAAACATAAAACAAAATCTGGATTGCTGACCAAATAGGCTCTTAATCATTTGCTTTGTTTCTCTATGGCTTATTGGATGAAGTTCTCCATATTTCATCTCCACTGGGTGTTTGGCAATTCTTTCCAGGATAATGTTGTTCAAATCCTAGTGGGTCAGTCATTCAAGTCTCAATCAAATTTGCTCTAGGCAAATGCAGTTAAAGCCTTGCTTGCTGAAATTTGGTTTGAAAGAAACTAAAGAGTTTCACGATTGGTTTCTCGACAAATCTCTCACGTGGCTGCATTTTGAAGTCGCAAGGCTTAATGCTTCCTCTTAGTGCTCTCTTTCCAAGCTCTATGCTAATTATTCAGTGCAAGATATATGTTTCCATTGGAGTGCTTTTATTTTCTTTGATTAGCTTTATCACATTTTCGGATGCTTATTTTGTTCTCCCAATATTTTTATTCTTGTTTCTATTTCATTGTAATTCGAGCATTAGACTCTTTTCATTATATCAATGAAAAGTTAAACTACCAAAGTGTTCTTTGTGAAGATATGGCTAAGGACGTATTCTCTTCCATTATTTGGAGCCTAGTTCTTTTAAAGCTTTGTTCACACGATTATCTATTCATTTATCTTTGACAGGGATTTCCTTAATGAGATTACCTGTTCTTCTTATTGCACCTGATTCTTAAATGCTTCACTCTTATTATTATTATCTGAATTTTTTTTCTCTCATTCTCATGCCCAGCCCAACATGTCATTATCTTCAAAAGCATTTCAGTTTTTCTTCGGTTTGAAACTTTGGTTTTGGGCTCACTTTGTTATGTCATGGGGAGACTTTGCACGCCTCTATTAGCTTCAGAGACCTCAAGAACTTTCCTTTATTAGTTTTTCATTTGGAGGCTTGAACTAAAGTTGTTAACCTTCCTTAAACATCCCAAATCCTTACTAATGGGACTCCTCCTTGGGGCCATTGTGCAGTTCATTACACATTCTTTGCGGGATCACAAGTTGGAAGACAAAAGAGAAGTTATTTGCCTTTGTGATGTTTTTCTTATTTTATGGGAATTTGGGAAGTTTGGTTGAAGATAAATAGAACAGTTTTCATATAGTTATTTTAATCATACAAATGAAATGAAGAACCATCTGCTGTACGTAGATTTATCTGATGCAACGGACCAAAAATATAATTCTCTATATGCTTCAAAGTTTAGATTCTCTGGTATATGGTGTGGGTTTTTTCTCTTCTCAGTCTACTTCCGTTTGTGGCAGACTGTTGAAGAAACTTTACACACGTTAAGAGGCATCAACTACTGTGAGCATGTTCATTCTCCAATGGTCAATTTAGATGCGTCTCCTGAGGACCTCTGGAGATCTGTTTTGTTACAGCAGATATGCCAGTCGTCAGGTGTCAATGGAGGCAATGTACCAACGTGTGTCCAGGATGGCCTTGCTTCTCATTCAGGAACCAATGACCGCTCAAGATTTAGGGTTAGCTCCGAATATGTTTTTCAAGTTGATCTTGTGATGAGATCTTTTTCTTTTCTTTTGGTTCAGTTTTTAGATCACCCTTGTTCACCCCCTGTAATTGTTGTGCAGAAATTTGATGTTCAAGATGCAAACAGCAATAATGACCTTGCACGTACTGGATTAGTGTCTAGTGCAGTTCAGATGGCATCTCATAGAGAAAATGGTGATGTATCAAATGGATCATTAGAAAATTCAAACAGATGTAGTGTCAACGAGAGTTGCAAGCGAGCTTTCTATAGTATTATAGATTCACAGAAGTTTATCTCATTGTGTAAGCTTCTATGTGAAAATTTCAGAGGAATCAAGGCTGATAATGTTTTTGACTTTAGTCTTGTAAACTCAAGGATCAAAGAAGGGGCTTATGAAAATTCACCCATGCTCTTCCTCTCTGACGTACAACAGGCAATATTTGATTATCTTGTTTCACTTTTTATTGTTACTTTATCTTACATTTTTGCTGAATTGCATGTGGAACTATTTATTAAATCACAAGTGCTTATAAATGAATAAATATATATTTCTGGAGAAATGATAATCAACTTAATGTTTTCCTTCTCCCATTTTTTTCTTCCCTTTTTTCATTAGTAATGCCTGCTTCTTTTCCCTATTTCTGTCGGTCCCTAATGTCTATTTCAGCAGACATTCAAACACACCGTTTTCTTCTCATTGTATTTTCATTGTTCATATTGAAGAAAGCTTGTATAAAATTGTTTGTTTTCTTTATTGCACTTTTGTTTTCTTAGATTTCATCCGGATTATTGCGCCAAATATGCTTTTCCCCATTTCCTGATTTCTAAACTTGTGGAAGTTTTACTATTTGTTGGTGTTGGAATTGTATTTTCAACCACAGCTGTACTCTTACTTTTTCTTGATTTGCCATTATATAACAGTTGATGTTTGATTTTCTGCAGATATGGAGAAAGTTTCAAGCAATTGGTACTGAATTGGTATCACTGGCAGAATGCCTCTCAGACTTTTCTAGAACTACCTATCGAGAAAAGGTGAAAACGAGTATCTTCAGCGGTTGATATGATGCTATATAAATTGTAGACTATATGTTTTAGTCATCTCTATCCTACTTTCTTTTTAAGAAATGCTATCTGGTTTGGTCTTCAATCTTTTGTGGTTTCTATTAGTTTTCGACCCTTCTATCTTAGATTTTCTTATAGCTTTCAACCTTGCAGGTGGGAGTTTCAGGGTGCAATGTATTTGAAGATGGAAAGCACGAGGTAAAAGAGTTTGTATTATGTCGCATTTTGTATTATTCTATTAAAAAATTGTACAAAAATTTATTAAATATTGCTTGACAAATATATGAGAAAAGGAGGATTGAAGCCTTAAGACATAGATACCACATAGTTTGGGTGTTGGTTAACTAGATCGTATTTAAATTTCATTTAGTGAACTTTGTCTATTCAAATTAAGTTCTCCTGTAATTGTAGGTTAAGTTTTAGACTATTTGTACATTCCTTGAATTGAGTATTGAAGCCTCAAGACAGAGACTCTTTGGGTACTGTTTCCTTATAAGCCCACCAACTTTTAGTTCTTTAAAAATTGTATATTTCACATGTCTGTGCTTGTGTCTTGTTTGAGATACAGATATTCATTTTTTGGTTGGCTTCTTTTCTCTTGTATGGTTATCTCTCACTCTGTAGGTTCTGTACAGTTGAAAGGTTCTGACTTTTGCCTCTTCTATTTCTCCTTTTTTATATTCTATATTAAGGGCTCTTCTTAGCATCTTGTCCTCACTCAGTATGTTATGACTTGACATCAGAATGGTTTTTCATCAAAACAAAAGGACGAAAAAGATAAAAGATAAAAGAAAAAAGATAAAAAGATAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTCCAACTTAAAACAAAAACATAAACTAACCTTCAAAGTTTAGGTAACATGATTCTTCCCCAAGAGGTATATCAGAGCCAAGGCCCATCTCAAAGCTAGATGGTTTGATTCCTCAACCCTTACAATTGTTGAACTAAAAAATATCAGTATCTATCGGATATCAACGTGTTACAATTAGGAATGCATCTAAACTTGTCCTAGTTATGATTTCACATTGTCAGTCCTAAGTGCATTTATTTGTTTAGAGGGTTTGTAACATCATCAAAGCTAATTACTAATTGTTTTCTCATGAATTCATCTGTATAGAGTTGGATTTTTTGAATGATTTGTTTTTCTTTTTCTTTCTTTTTTTTTTCTGCTGACACGCAAATTTCTTGTCCGCTTAGTACTCTACTTGGGATTCACCCTCTCATGCTAAAGCAGAACATATGGATGGTTATGGAGCGTATAAAGTTTGTGCCTGCAGAAGTTGTGGAGAGAAAGCAGAAGGGATTGATTGTCTGGTTTGTGACTCATGCGAGGAAATTTACCATATTTCTTGCATCAAACCTCCCGTCAAAGAGATTCCCCTTAAGAGTTGGTACTGTGCTAGTTGCATTGCAAGTGGATTTAGTTTGCGTCATGACAACTGTGCAGTATGTGAGAGGTTGAATACGCCTACGACGCTAGTCAATGGAGTTGAGGAAATTCTGGAATCAAGTGAACACAATCATTTTCATGGGGATAAGAATCCGAACTATTGTATGGGTGACGGTACTGAACAACTCAAGGACGGCAAAGATTTGGGCCCTTGCAAAATTTGTGGAAATGGAGTAGAAGGTGGTGATAAATATAGAATATGCAGCCACCTGTTCTGCCCTCATAAATGCTATCACACCAGGTGCTTGACTAAGAAGCAGTTAAAATCTTACGATACATGCTGGTACTGCCCTTCTTGTCTTTGCAGAGCATGCCTCATAAATCAAGACGATGACAAGATTGTTTTATGTGATGGCTGTGATCACGGATTCCACATTTATTGTATGAGACCCCCTCTTGCTGCAATTCCAAAAGGAAAATGGTTTTGTAGCAAATGTGCAGCTGGAATCCGGGCAATACGCACAGTGAAAATGGCATATGAAAATTTTGAAAACAAGCAAAGTAAGAGAGGTAAAGATACATTTGGGGGTTACGGAAATTCAGGCAAGAAACGGATCAATGGAGGTGATGAGGAATTGGATACAGGAAGGGGAGGAATGGATATGCTTCTTACTGCAGCCAAGACTCTAAATTATGAAGAGGGTCTGGCTAACCTTTCATATAAATAAATAGTTGATTCAACGGATGGTCTGAAGCACCAAAATTCCATGCGACTGATTACACATTTTAATTCTCATAGAATTTTGTTTTATTATGATCATCGACGTAAATTTCATTAGGTTTTGGACACTTAGGTATGCTGACTTTTCGGAAAATTGTAACTTGGAATGATGTCTGTAGGCTGTGTAAAAGAAACTTGGCACATCTTAAAATGAAGAGTCTGATAAACCAGGATGCTGTTTGAAAAAAGGAGATCCAGGTGAGAATCAGCCTTGTATTGTTTTACTCATTTTGTACCATGAAGTATATAATCTCTCCAAGGATTGTGAGAATGTCGATGTTTCGGATCTGTTGTAAAATTCATTTAATACAATGACAATCACAGGAAATGATGGCTTTTTGTACGTGTTCTGCCGCATTCTTTATTTCTTATTTGACATTTGATATTTTGGATATATATTTAGTTTCTCATTTTCTGTAATGTATGTTATATTTTGGGATTATGTATCTATGTTGAATTCTGTCTCATTCTAAAACATATTTTATGCGTCCATACGAAGACCATTTATTTTCTTACAGTTCCTAATTTACAGGCGTTTTTGTTCACATTTTAAAAATCAACTTTGACACGCATCAGATTATGCTATACTTGGAAAGAGTATATATAAATATATCTGGAAAAGCAGGTGTTCCAACGACTGCCCATTTAGTTGCAAGTGGAGAAATTCTTGATTTAAGTTAGCCTTTGCCTAGCATTGATGGATGCAAGGTAAGTAAGTCTGGTTAGGTTTTTGGCAAAATATCATAAGAGTGGTTGTCCCACATTGAAAATGTTCAAAGAAGTGATAGGGCTCCAAGCACTATAAAAGGAGCCTATGTCTTTCGTTTCTTATCTTTCTAATTTGAAACAATTTAAGTCTGGTATATTAGCTCTAGTTCTGTAAGTAATATAATGCTTTGAGAGAATGTTTTCTTTATCAGGTATAGAGAATGTTTCTGTGTGATTGTAATAATTTTTCATATAGTGAATTTTTTCTGGTTCGTGAGTTTTTTCTTCGGTTTGGAGTTTTTCTTTGTTAATTTTTGTGTTTCCAGTTTAATTGCTTTCTTTTAATTTCGTTGTTATTTTTCTATTATTCTTGTAGTAGTAGGGAGAGGTTTTTCCAACAATTGGTATTAGAGCTTTAGGTTCATAGTTTCCTAGAAATAAGTTTCTTGAATTTCTAAGTATGCTTTGTGGTTCCAGCATTGTCTGAACTTACACATCATAATAGAATTCTTGAAACGAGCTACGATATTGTGAGTTGTTCATTGTTTGTTGATTTGTTAGGAAGTGAAACAAATATGTCA

mRNA sequence

ATGATCTACTTCCGTTTGTGGCAGACTGTTGAAGAAACTTTACACACGTTAAGAGGCATCAACTACTGTGAGCATGTTCATTCTCCAATGGTCAATTTAGATGCGTCTCCTGAGGACCTCTGGAGATCTGTTTTGTTACAGCAGATATGCCAGTCGTCAGGTGTCAATGGAGGCAATGTACCAACGTGTGTCCAGGATGGCCTTGCTTCTCATTCAGGAACCAATGACCGCTCAAGATTTAGGTTTTTAGATCACCCTTGTTCACCCCCTGTAATTGTTGTGCAGAAATTTGATGTTCAAGATGCAAACAGCAATAATGACCTTGCACGTACTGGATTAGTGTCTAGTGCAGTTCAGATGGCATCTCATAGAGAAAATGGTGATGTATCAAATGGATCATTAGAAAATTCAAACAGATGTAGTGTCAACGAGAGTTGCAAGCGAGCTTTCTATAGTATTATAGATTCACAGAAGTTTATCTCATTGTGTAAGCTTCTATGTGAAAATTTCAGAGGAATCAAGGCTGATAATGTTTTTGACTTTAGTCTTGTAAACTCAAGGATCAAAGAAGGGGCTTATGAAAATTCACCCATGCTCTTCCTCTCTGACGTACAACAGGCAATATTTGATTATCTTGTTTCACTTTTTATTGTTACTTTATCTTACATTTTTGCTGAATTGCATGTGGAACTATTTATTAAATCACAAACATTCAAACACACCGTTTTCTTCTCATTATTTCATCCGGATTATTGCGCCAAATATGCTTTTCCCCATTTCCTGATTTCTAAACTTGTGGAAGTTTTACTATTTGTTGGTGTTGGAATTGTATTTTCAACCACAGCTATATGGAGAAAGTTTCAAGCAATTGGTACTGAATTGGTATCACTGGCAGAATGCCTCTCAGACTTTTCTAGAACTACCTATCGAGAAAAGACTATATGTTTTAGTCATCTCTATCCTACTTTCTTTTTAAGAAATGCTATCTGGTTTGGTCTTCAATCTTTTGTGGTGGGAGTTTCAGGGTGCAATGTATTTGAAGATGGAAAGCACGAGTACTCTACTTGGGATTCACCCTCTCATGCTAAAGCAGAACATATGGATGGTTATGGAGCGTATAAAGTTTGTGCCTGCAGAAGTTGTGGAGAGAAAGCAGAAGGGATTGATTGTCTGGTTTGTGACTCATGCGAGGAAATTTACCATATTTCTTGCATCAAACCTCCCGTCAAAGAGATTCCCCTTAAGAGTTGGTACTGTGCTAGTTGCATTGCAAGTGGATTTAGTTTGCGTCATGACAACTGTGCAGTATGTGAGAGGTTGAATACGCCTACGACGCTAGTCAATGGAGTTGAGGAAATTCTGGAATCAAGTGAACACAATCATTTTCATGGGGATAAGAATCCGAACTATTGTATGGGTGACGGTACTGAACAACTCAAGGACGGCAAAGATTTGGGCCCTTGCAAAATTTGTGGAAATGGAGTAGAAGGTGGTGATAAATATAGAATATGCAGCCACCTGTTCTGCCCTCATAAATGCTATCACACCAGGTGCTTGACTAAGAAGCAGTTAAAATCTTACGATACATGCTGGTACTGCCCTTCTTGTCTTTGCAGAGCATGCCTCATAAATCAAGACGATGACAAGATTGTTTTATGTGATGGCTGTGATCACGGATTCCACATTTATTGTATGAGACCCCCTCTTGCTGCAATTCCAAAAGGAAAATGGTTTTGTAGCAAATGTGCAGCTGGAATCCGGGCAATACGCACAGTGAAAATGGCATATGAAAATTTTGAAAACAAGCAAAGTAAGAGAGGTAAAGATACATTTGGGGGTTACGGAAATTCAGGCAAGAAACGGATCAATGGAGGTGATGAGGAATTGGATACAGGAAGGGGAGGAATGGATATGCTTCTTACTGCAGCCAAGACTCTAAATTATGAAGAGGGTCTGGCTAACCTTTCATATAAATAAATAGTTGATTCAACGGATGGTCTGAAGCACCAAAATTCCATGCGACTGATTACACATTTTAATTCTCATAGAATTTTGTTTTATTATGATCATCGACGTAAATTTCATTAGGTTTTGGACACTTAGGTATGCTGACTTTTCGGAAAATTGTAACTTGGAATGATGTCTGTAGGCTGTGTAAAAGAAACTTGGCACATCTTAAAATGAAGAGTCTGATAAACCAGGATGCTGTTTGAAAAAAGGAGATCCAGTTCCTAATTTACAGGCGTTTTTGTTCACATTTTAAAAATCAACTTTGACACGCATCAGATTATGCTATACTTGGAAAGAGTATATATAAATATATCTGGAAAAGCAGGTGTTCCAACGACTGCCCATTTAGTTGCAAGTGGAGAAATTCTTGATTTAAGTTAGCCTTTGCCTAGCATTGATGGATGCAAGGAAGTGAAACAAATATGTCA

Coding sequence (CDS)

ATGATCTACTTCCGTTTGTGGCAGACTGTTGAAGAAACTTTACACACGTTAAGAGGCATCAACTACTGTGAGCATGTTCATTCTCCAATGGTCAATTTAGATGCGTCTCCTGAGGACCTCTGGAGATCTGTTTTGTTACAGCAGATATGCCAGTCGTCAGGTGTCAATGGAGGCAATGTACCAACGTGTGTCCAGGATGGCCTTGCTTCTCATTCAGGAACCAATGACCGCTCAAGATTTAGGTTTTTAGATCACCCTTGTTCACCCCCTGTAATTGTTGTGCAGAAATTTGATGTTCAAGATGCAAACAGCAATAATGACCTTGCACGTACTGGATTAGTGTCTAGTGCAGTTCAGATGGCATCTCATAGAGAAAATGGTGATGTATCAAATGGATCATTAGAAAATTCAAACAGATGTAGTGTCAACGAGAGTTGCAAGCGAGCTTTCTATAGTATTATAGATTCACAGAAGTTTATCTCATTGTGTAAGCTTCTATGTGAAAATTTCAGAGGAATCAAGGCTGATAATGTTTTTGACTTTAGTCTTGTAAACTCAAGGATCAAAGAAGGGGCTTATGAAAATTCACCCATGCTCTTCCTCTCTGACGTACAACAGGCAATATTTGATTATCTTGTTTCACTTTTTATTGTTACTTTATCTTACATTTTTGCTGAATTGCATGTGGAACTATTTATTAAATCACAAACATTCAAACACACCGTTTTCTTCTCATTATTTCATCCGGATTATTGCGCCAAATATGCTTTTCCCCATTTCCTGATTTCTAAACTTGTGGAAGTTTTACTATTTGTTGGTGTTGGAATTGTATTTTCAACCACAGCTATATGGAGAAAGTTTCAAGCAATTGGTACTGAATTGGTATCACTGGCAGAATGCCTCTCAGACTTTTCTAGAACTACCTATCGAGAAAAGACTATATGTTTTAGTCATCTCTATCCTACTTTCTTTTTAAGAAATGCTATCTGGTTTGGTCTTCAATCTTTTGTGGTGGGAGTTTCAGGGTGCAATGTATTTGAAGATGGAAAGCACGAGTACTCTACTTGGGATTCACCCTCTCATGCTAAAGCAGAACATATGGATGGTTATGGAGCGTATAAAGTTTGTGCCTGCAGAAGTTGTGGAGAGAAAGCAGAAGGGATTGATTGTCTGGTTTGTGACTCATGCGAGGAAATTTACCATATTTCTTGCATCAAACCTCCCGTCAAAGAGATTCCCCTTAAGAGTTGGTACTGTGCTAGTTGCATTGCAAGTGGATTTAGTTTGCGTCATGACAACTGTGCAGTATGTGAGAGGTTGAATACGCCTACGACGCTAGTCAATGGAGTTGAGGAAATTCTGGAATCAAGTGAACACAATCATTTTCATGGGGATAAGAATCCGAACTATTGTATGGGTGACGGTACTGAACAACTCAAGGACGGCAAAGATTTGGGCCCTTGCAAAATTTGTGGAAATGGAGTAGAAGGTGGTGATAAATATAGAATATGCAGCCACCTGTTCTGCCCTCATAAATGCTATCACACCAGGTGCTTGACTAAGAAGCAGTTAAAATCTTACGATACATGCTGGTACTGCCCTTCTTGTCTTTGCAGAGCATGCCTCATAAATCAAGACGATGACAAGATTGTTTTATGTGATGGCTGTGATCACGGATTCCACATTTATTGTATGAGACCCCCTCTTGCTGCAATTCCAAAAGGAAAATGGTTTTGTAGCAAATGTGCAGCTGGAATCCGGGCAATACGCACAGTGAAAATGGCATATGAAAATTTTGAAAACAAGCAAAGTAAGAGAGGTAAAGATACATTTGGGGGTTACGGAAATTCAGGCAAGAAACGGATCAATGGAGGTGATGAGGAATTGGATACAGGAAGGGGAGGAATGGATATGCTTCTTACTGCAGCCAAGACTCTAAATTATGAAGAGGGTCTGGCTAACCTTTCATATAAATAA

Protein sequence

MIYFRLWQTVEETLHTLRGINYCEHVHSPMVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENGDVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRIKEGAYENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLFHPDYCAKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRTTYREKTICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANLSYK
Homology
BLAST of Lsi11G009910 vs. ExPASy Swiss-Prot
Match: Q6ZJM9 (PHD finger protein EHD3 OS=Oryza sativa subsp. japonica OX=39947 GN=EHD3 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.6e-49
Identity = 149/577 (25.82%), Postives = 232/577 (40.21%), Query Frame = 0

Query: 41  WRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRFLDHPC--SPPVIVVQKFD 100
           WR  L   +   +   GG + TC++  L                +PC  +  V+V  +F 
Sbjct: 57  WRDTLHGFLQSPAISQGGGIQTCIRHALQ--------------HNPCLLTNGVVVHTEFK 116

Query: 101 VQDANSNNDLARTGLVSSAVQMASHRENGDV--SNGSLENSNRCSVNES----CKRAFYS 160
              A+S  + A+       VQ  +    G V  ++ +++++   + +E+    C  A + 
Sbjct: 117 GNPAHSQGEEAK-------VQHPNGAAGGKVVSADAAIQDAAAAASSEANKAMCNNALFD 176

Query: 161 IIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRIKEGAYENSPMLFLSDVQQAIFDYL 220
           I+ SQKF  LC LL   F   K  +V D   ++++++ G Y ++P LF  D+QQ      
Sbjct: 177 ILVSQKFALLCHLLLGTFHVNKPGDVIDLEKIDAKMRNGDYAHNPALFDDDIQQ------ 236

Query: 221 VSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLFHPDYCAKYAFPHFLISKLVEVLLFV 280
                                                                       
Sbjct: 237 ------------------------------------------------------------ 296

Query: 281 GVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRTTYREKTICFS------HLYPTFFLR 340
                     +W KF+ +G E+  LA  LS  SR +Y+++   FS      H      L 
Sbjct: 297 ----------MWEKFEQVGQEMTGLASNLSTISRVSYQKQASGFSEAEVAEHRIEEISLP 356

Query: 341 NAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAE 400
            A+    +     V           + +  DS SH+            +C C  CG K +
Sbjct: 357 GAVHVVTKESTTTV-----------QLAPCDS-SHSTIPKRTVPPGRDLCPCDGCGTKVD 416

Query: 401 GIDCLVCDSCEEIYHISCIK---PPVKEIPLKSWYCASCIASGFSLRHD----------- 460
             + L+CD C+ +YH +C+K   P +K++P   W+C++C      L  D           
Sbjct: 417 VEEGLICDECDTMYHFACVKLLNPDIKQVP-AIWHCSTCSFKKKELAADTTNNVAHDCLH 476

Query: 461 --NCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTE-QLKDGKDLGPCK 520
             NC +C++L    T     +  ++        G    +  MG+  E  L        CK
Sbjct: 477 GGNCVLCDQLELVKTEEEDPKLPIKIELAEEREGSSVSS--MGEDNEPDLSTTALSNLCK 521

Query: 521 ICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDT----CWYCPSCLCRACLINQ 580
            CG   +   ++ +C H +C +K YH RCL   QL         CWYCPSCLCR C  ++
Sbjct: 537 HCGTCEDDDKRFMVCGHPYCVYKFYHIRCLKTSQLAIEQQKKLGCWYCPSCLCRGCFQDK 521

Query: 581 DDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKC 583
           DDD+IV+CDGCD G+HIYCMRP    IPKGKW+C+ C
Sbjct: 597 DDDQIVMCDGCDEGYHIYCMRPARNTIPKGKWYCTFC 521

BLAST of Lsi11G009910 vs. ExPASy Swiss-Prot
Match: Q38JA7 (Lysine-specific demethylase 5C OS=Canis lupus familiaris OX=9615 GN=KDM5C PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.3e-12
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 519 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWF 578
           +T +  +++    +  S +CR C    +DDK++LCDGCD  +HI+C+ PPL  IPKG W 
Sbjct: 308 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 367

Query: 579 CSKC 583
           C KC
Sbjct: 368 CPKC 371

BLAST of Lsi11G009910 vs. ExPASy Swiss-Prot
Match: P41229 (Lysine-specific demethylase 5C OS=Homo sapiens OX=9606 GN=KDM5C PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 3.3e-12
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 519 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWF 578
           +T +  +++    +  S +CR C    +DDK++LCDGCD  +HI+C+ PPL  IPKG W 
Sbjct: 308 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 367

Query: 579 CSKC 583
           C KC
Sbjct: 368 CPKC 371

BLAST of Lsi11G009910 vs. ExPASy Swiss-Prot
Match: P41230 (Lysine-specific demethylase 5C OS=Mus musculus OX=10090 GN=Kdm5c PE=1 SV=4)

HSP 1 Score: 75.1 bits (183), Expect = 3.3e-12
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 519 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWF 578
           +T +  +++    +  S +CR C    +DDK++LCDGCD  +HI+C+ PPL  IPKG W 
Sbjct: 308 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 367

Query: 579 CSKC 583
           C KC
Sbjct: 368 CPKC 371

BLAST of Lsi11G009910 vs. ExPASy Swiss-Prot
Match: A1YVX4 (Lysine-specific demethylase 5C OS=Sus scrofa OX=9823 GN=KDM5C PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.3e-12
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 519 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWF 578
           +T +  +++    +  S +CR C    +DDK++LCDGCD  +HI+C+ PPL  IPKG W 
Sbjct: 267 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 326

Query: 579 CSKC 583
           C KC
Sbjct: 327 CPKC 330

BLAST of Lsi11G009910 vs. ExPASy TrEMBL
Match: A0A1S4DWX3 (remodeling and spacing factor 1 OS=Cucumis melo OX=3656 GN=LOC103490198 PE=4 SV=1)

HSP 1 Score: 961.8 bits (2485), Expect = 1.4e-276
Identity = 485/648 (74.85%), Postives = 497/648 (76.70%), Query Frame = 0

Query: 8   QTVEETLHTLRGINYCEHVHSPMVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDG 67
           + VEETLHTLRGI  CEHVHSPMVNLD SPEDLWRSV LQQICQSSGV GGNVPTCVQDG
Sbjct: 47  RAVEETLHTLRGIGSCEHVHSPMVNLDESPEDLWRSVWLQQICQSSGVIGGNVPTCVQDG 106

Query: 68  LASHSGTNDRSRFRFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENG 127
           LASHSGTNDRSRFR              KFD QDANSNNDLA TG VSS VQMASHRENG
Sbjct: 107 LASHSGTNDRSRFR--------------KFDAQDANSNNDLAHTGSVSSTVQMASHRENG 166

Query: 128 DVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSR 187
           DVSNGSLENSNRCSVNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSR
Sbjct: 167 DVSNGSLENSNRCSVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSR 226

Query: 188 IKEGAYENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLF 247
           IKEGAYENS  LFLSD+QQ                                         
Sbjct: 227 IKEGAYENSSALFLSDIQQ----------------------------------------- 286

Query: 248 HPDYCAKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRT 307
                                              IWRKFQAIGTELVSLAE LSDFSRT
Sbjct: 287 -----------------------------------IWRKFQAIGTELVSLAESLSDFSRT 346

Query: 308 TYREKTICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHM 367
           TYREK                         VGVSG NVFEDGKHE S WDSPSHAKAEHM
Sbjct: 347 TYREK-------------------------VGVSGRNVFEDGKHEDSIWDSPSHAKAEHM 406

Query: 368 DGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGF 427
           DGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCA+CIASGF
Sbjct: 407 DGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCATCIASGF 466

Query: 428 SLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKDLGP 487
           SLRHDNC VC+RLNTPTTL NGV  ILE+SEHNHFHGD NP YCM DGTEQLKDGKDLGP
Sbjct: 467 SLRHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANPKYCMDDGTEQLKDGKDLGP 526

Query: 488 CKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDD 547
           CKICGN VEG +KY +CSHLFCPHKCYHTRCLTKKQLKSYD CWYCPSCLCRACLINQDD
Sbjct: 527 CKICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYDACWYCPSCLCRACLINQDD 576

Query: 548 DKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQSKRG 607
           DKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+AIR+VKMAYENFENKQSKRG
Sbjct: 587 DKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIRSVKMAYENFENKQSKRG 576

Query: 608 KDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANL 656
           KDTF   GN GKKR NGG+EE DTG GGMDMLLTAAKTLNYEEGLANL
Sbjct: 647 KDTF---GNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNYEEGLANL 576

BLAST of Lsi11G009910 vs. ExPASy TrEMBL
Match: A0A5D3DIH3 (Remodeling and spacing factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003110 PE=4 SV=1)

HSP 1 Score: 961.4 bits (2484), Expect = 1.9e-276
Identity = 485/646 (75.08%), Postives = 496/646 (76.78%), Query Frame = 0

Query: 10  VEETLHTLRGINYCEHVHSPMVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLA 69
           VEETLHTLRGI  CEHVHSPMVNLD SPEDLWRSV LQQICQSSGV GGNVPTCVQDGLA
Sbjct: 47  VEETLHTLRGIGSCEHVHSPMVNLDESPEDLWRSVWLQQICQSSGVIGGNVPTCVQDGLA 106

Query: 70  SHSGTNDRSRFRFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENGDV 129
           SHSGTNDRSRFR              KFD QDANSNNDLA TG VSS VQMASHRENGDV
Sbjct: 107 SHSGTNDRSRFR--------------KFDAQDANSNNDLAHTGSVSSTVQMASHRENGDV 166

Query: 130 SNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRIK 189
           SNGSLENSNRCSVNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSRIK
Sbjct: 167 SNGSLENSNRCSVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSRIK 226

Query: 190 EGAYENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLFHP 249
           EGAYENS  LFLSD+QQ                                           
Sbjct: 227 EGAYENSSALFLSDIQQ------------------------------------------- 286

Query: 250 DYCAKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRTTY 309
                                            IWRKFQAIGTELVSLAE LSDFSRTTY
Sbjct: 287 ---------------------------------IWRKFQAIGTELVSLAESLSDFSRTTY 346

Query: 310 REKTICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHMDG 369
           REK                         VGVSG NVFEDGKHE S WDSPSHAKAEHMDG
Sbjct: 347 REK-------------------------VGVSGRNVFEDGKHEDSIWDSPSHAKAEHMDG 406

Query: 370 YGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGFSL 429
           YGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCA+CIASGFSL
Sbjct: 407 YGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCATCIASGFSL 466

Query: 430 RHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKDLGPCK 489
           RHDNC VC+RLNTPTTL NGV  ILE+SEHNHFHGD NP YCM DGTEQLKDGKDLGPCK
Sbjct: 467 RHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANPKYCMDDGTEQLKDGKDLGPCK 526

Query: 490 ICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDDDK 549
           ICGN VEG +KY +CSHLFCPHKCYHTRCLTKKQLKSYD CWYCPSCLCRACLINQDDDK
Sbjct: 527 ICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYDACWYCPSCLCRACLINQDDDK 574

Query: 550 IVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQSKRGKD 609
           IVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+AIR+VKMAYENFENKQSKRGKD
Sbjct: 587 IVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIRSVKMAYENFENKQSKRGKD 574

Query: 610 TFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANL 656
           TF   GN GKKR NGG+EE DTG GGMDMLLTAAKTLNYEEGLANL
Sbjct: 647 TF---GNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNYEEGLANL 574

BLAST of Lsi11G009910 vs. ExPASy TrEMBL
Match: A0A6J1IEM0 (PHD finger protein EHD3-like OS=Cucurbita maxima OX=3661 GN=LOC111475137 PE=4 SV=1)

HSP 1 Score: 926.0 bits (2392), Expect = 8.7e-266
Identity = 467/647 (72.18%), Postives = 486/647 (75.12%), Query Frame = 0

Query: 9   TVEETLHTLRGINYCEHVHSPMVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGL 68
           TVEETLH LRG N C+HVH PMVNLD SP+DLWRSVL++Q+C  S VNG NVP CV DGL
Sbjct: 83  TVEETLHLLRGSNSCDHVHPPMVNLDESPDDLWRSVLVKQMCHLSSVNGDNVPMCVHDGL 142

Query: 69  ASHSGTNDRSRFRFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENGD 128
           A++SG ND SRFR              KFD QDANSNNDLARTG VSS VQMASHRENG 
Sbjct: 143 ATNSGANDPSRFR--------------KFDAQDANSNNDLARTGSVSSTVQMASHRENGV 202

Query: 129 VSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRI 188
           VSNGSLEN +RCSVNESC RAF SIIDSQKFISLCKLL ENFRGIKADNVFDFSLVNSRI
Sbjct: 203 VSNGSLENPDRCSVNESCWRAFLSIIDSQKFISLCKLLSENFRGIKADNVFDFSLVNSRI 262

Query: 189 KEGAYENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLFH 248
           KEGAYENSP LFLSDVQQ                                          
Sbjct: 263 KEGAYENSPTLFLSDVQQ------------------------------------------ 322

Query: 249 PDYCAKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRTT 308
                                             IWRKFQAIGTELVSLAE LSDFSRTT
Sbjct: 323 ----------------------------------IWRKFQAIGTELVSLAESLSDFSRTT 382

Query: 309 YREKTICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHMD 368
           YREK                         VGVSG NVFEDGKHE STW+SPSHAKAEHMD
Sbjct: 383 YREK-------------------------VGVSGRNVFEDGKHESSTWESPSHAKAEHMD 442

Query: 369 GYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGFS 428
           GYGAYKVCACRSCGEKAEGI+CLVCDSCEEIYHISCIKPPVKEIPLKSWYCASC  SGFS
Sbjct: 443 GYGAYKVCACRSCGEKAEGINCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCTGSGFS 502

Query: 429 LRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKDLGPC 488
           LRHDNC VCERLNTPT L NGV EILE+SEHNHFHGD NPNYC  DG EQLKD +DLGPC
Sbjct: 503 LRHDNCVVCERLNTPTMLANGVGEILETSEHNHFHGDDNPNYCTDDGFEQLKDSQDLGPC 562

Query: 489 KICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDDD 548
           KICGNGVEGGDKYR+CSHLFCPH+ YHTRCLTK QLKSYDTCWYCPSCLCRACL+NQDDD
Sbjct: 563 KICGNGVEGGDKYRMCSHLFCPHQFYHTRCLTKNQLKSYDTCWYCPSCLCRACLVNQDDD 611

Query: 549 KIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQSKRGK 608
           KIVLCDGCDHG+HIYCMRPPLAAIPKG+WFCSKC AGI+AIR VKMAYENFENK+SKRGK
Sbjct: 623 KIVLCDGCDHGYHIYCMRPPLAAIPKGQWFCSKCEAGIQAIRRVKMAYENFENKRSKRGK 611

Query: 609 DTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANL 656
           DTF   G SGKKRINGGDEE DTGRGGMDMLLTAAKTLNYEEGL NL
Sbjct: 683 DTF---GKSGKKRINGGDEESDTGRGGMDMLLTAAKTLNYEEGLTNL 611

BLAST of Lsi11G009910 vs. ExPASy TrEMBL
Match: A0A6J1F863 (PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111442986 PE=4 SV=1)

HSP 1 Score: 921.8 bits (2381), Expect = 1.6e-264
Identity = 466/647 (72.02%), Postives = 483/647 (74.65%), Query Frame = 0

Query: 9   TVEETLHTLRGINYCEHVHSPMVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGL 68
           TVEETLH LRG N C+HVH PMVNLD SP+DLWRSV  +Q+C  S VNG NVP CV DGL
Sbjct: 83  TVEETLHLLRGSNSCDHVHPPMVNLDESPDDLWRSVFSKQMCHLSSVNGDNVPMCVNDGL 142

Query: 69  ASHSGTNDRSRFRFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENGD 128
           A++SG ND  RFR              KFD QDANSNNDLARTG VSS VQMASHRENG 
Sbjct: 143 ATNSGANDPPRFR--------------KFDAQDANSNNDLARTGSVSSTVQMASHRENGV 202

Query: 129 VSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRI 188
           VSNGSLEN +RCSVNESC RAF SIIDSQKFISLCKLL ENFRGIKADNVFDFSLVNSRI
Sbjct: 203 VSNGSLENPDRCSVNESCWRAFLSIIDSQKFISLCKLLSENFRGIKADNVFDFSLVNSRI 262

Query: 189 KEGAYENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLFH 248
           KEGAYENSP LFLSDVQQ                                          
Sbjct: 263 KEGAYENSPTLFLSDVQQ------------------------------------------ 322

Query: 249 PDYCAKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRTT 308
                                             IWRKFQAIGTELVSLAE LSDFSRTT
Sbjct: 323 ----------------------------------IWRKFQAIGTELVSLAESLSDFSRTT 382

Query: 309 YREKTICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHMD 368
           YREK                         VGVSG NVFEDGKHE STW+SPSHAKAEHMD
Sbjct: 383 YREK-------------------------VGVSGRNVFEDGKHESSTWESPSHAKAEHMD 442

Query: 369 GYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGFS 428
           GYGAYKVCACRSCGEKAEGI+CLVCDSCEEIYHISCIKPPVKEIPLKSWYCASC  SGFS
Sbjct: 443 GYGAYKVCACRSCGEKAEGINCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCTGSGFS 502

Query: 429 LRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKDLGPC 488
           LRHDNC VCERLNTPT L NGV EILE+SEHNHFHGD NPNYC  DG EQLKD +DLGPC
Sbjct: 503 LRHDNCVVCERLNTPTMLANGVGEILETSEHNHFHGDDNPNYCTDDGFEQLKDSQDLGPC 562

Query: 489 KICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDDD 548
           KICGNGVEGGDKYR+CSHLFCPH+ YHTRCLTK QLKSYDTCWYCPSCLCRACLINQDDD
Sbjct: 563 KICGNGVEGGDKYRMCSHLFCPHQFYHTRCLTKNQLKSYDTCWYCPSCLCRACLINQDDD 611

Query: 549 KIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQSKRGK 608
           KIVLCDGCDHG+HIYCMRPPLAAIPKG+WFCSKC AGI+AIR VKMAYENFENK+SKRGK
Sbjct: 623 KIVLCDGCDHGYHIYCMRPPLAAIPKGQWFCSKCEAGIQAIRRVKMAYENFENKRSKRGK 611

Query: 609 DTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANL 656
           DTF   G SGKKRINGGDEE DTGRGGMDMLLTAAKTLNYEEGL NL
Sbjct: 683 DTF---GKSGKKRINGGDEESDTGRGGMDMLLTAAKTLNYEEGLTNL 611

BLAST of Lsi11G009910 vs. ExPASy TrEMBL
Match: A0A6J1EE29 (PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111433442 PE=4 SV=1)

HSP 1 Score: 885.6 bits (2287), Expect = 1.3e-253
Identity = 456/651 (70.05%), Postives = 478/651 (73.43%), Query Frame = 0

Query: 8   QTVEETLHTLRGINYCEHVHSPMVNLDASPEDLWRSVLLQQICQSSGV---NGGNVPTCV 67
           QTV+ETL+TLRG N  +HVHSPMVNLD  PEDLWRSVLLQQI QSS V   NGGN+P CV
Sbjct: 84  QTVQETLYTLRGSNSYDHVHSPMVNLDECPEDLWRSVLLQQIYQSSSVNGGNGGNIPMCV 143

Query: 68  QDGLASHSGTNDRSRFRFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHR 127
            DGLASHSG  D SRF+               FD Q  NSN DL RTG VSS VQMASH+
Sbjct: 144 HDGLASHSGAIDPSRFKI--------------FDAQHGNSNIDLLRTGSVSSRVQMASHK 203

Query: 128 ENGDVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLV 187
           ENG VS+GSLENSNRCSV+ESC RAF+SIIDSQKFISLCKLL ENFRGIKADNVFDFSLV
Sbjct: 204 ENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADNVFDFSLV 263

Query: 188 NSRIKEGAYENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFF 247
           NSRIKEGAYENSPMLFLSDVQQ                                      
Sbjct: 264 NSRIKEGAYENSPMLFLSDVQQ-------------------------------------- 323

Query: 248 SLFHPDYCAKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDF 307
                                                 IWRKFQAIGTELVSLAE LSDF
Sbjct: 324 --------------------------------------IWRKFQAIGTELVSLAESLSDF 383

Query: 308 SRTTYREKTICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKA 367
           SR  Y+EK                         VGVSG NVFEDGKHE+ST +SPSHAKA
Sbjct: 384 SRAAYQEK-------------------------VGVSGRNVFEDGKHEFSTRESPSHAKA 443

Query: 368 EHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIA 427
           EHMDGYG YKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSW+CASCI+
Sbjct: 444 EHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWFCASCIS 503

Query: 428 SGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKD 487
           SGFSL HDNC VCERLNTPT L NGV EILE+SE N     +N N C+ DG EQL D KD
Sbjct: 504 SGFSLCHDNCVVCERLNTPTMLANGVGEILETSEVN-----ENLNCCLDDGIEQLNDSKD 563

Query: 488 LGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLIN 547
           LGPCKICGNGVE GD +RICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLIN
Sbjct: 564 LGPCKICGNGVESGDNFRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLIN 614

Query: 548 QDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQS 607
           QDDDKIVLCDGCDHG+HIYCMRPPLA IPKGKWFCSKC AGI AIR VK AYENFE+K+S
Sbjct: 624 QDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCEAGIEAIRRVKRAYENFEHKRS 614

Query: 608 KRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANL 656
           KRGKDTFGGYGNSGKKRINGGD+E DTGR GMDMLLTAAKTLNYEEGLANL
Sbjct: 684 KRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAAKTLNYEEGLANL 614

BLAST of Lsi11G009910 vs. NCBI nr
Match: XP_016900482.1 (PREDICTED: remodeling and spacing factor 1 [Cucumis melo])

HSP 1 Score: 961.8 bits (2485), Expect = 3.0e-276
Identity = 485/648 (74.85%), Postives = 497/648 (76.70%), Query Frame = 0

Query: 8   QTVEETLHTLRGINYCEHVHSPMVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDG 67
           + VEETLHTLRGI  CEHVHSPMVNLD SPEDLWRSV LQQICQSSGV GGNVPTCVQDG
Sbjct: 47  RAVEETLHTLRGIGSCEHVHSPMVNLDESPEDLWRSVWLQQICQSSGVIGGNVPTCVQDG 106

Query: 68  LASHSGTNDRSRFRFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENG 127
           LASHSGTNDRSRFR              KFD QDANSNNDLA TG VSS VQMASHRENG
Sbjct: 107 LASHSGTNDRSRFR--------------KFDAQDANSNNDLAHTGSVSSTVQMASHRENG 166

Query: 128 DVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSR 187
           DVSNGSLENSNRCSVNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSR
Sbjct: 167 DVSNGSLENSNRCSVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSR 226

Query: 188 IKEGAYENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLF 247
           IKEGAYENS  LFLSD+QQ                                         
Sbjct: 227 IKEGAYENSSALFLSDIQQ----------------------------------------- 286

Query: 248 HPDYCAKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRT 307
                                              IWRKFQAIGTELVSLAE LSDFSRT
Sbjct: 287 -----------------------------------IWRKFQAIGTELVSLAESLSDFSRT 346

Query: 308 TYREKTICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHM 367
           TYREK                         VGVSG NVFEDGKHE S WDSPSHAKAEHM
Sbjct: 347 TYREK-------------------------VGVSGRNVFEDGKHEDSIWDSPSHAKAEHM 406

Query: 368 DGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGF 427
           DGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCA+CIASGF
Sbjct: 407 DGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCATCIASGF 466

Query: 428 SLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKDLGP 487
           SLRHDNC VC+RLNTPTTL NGV  ILE+SEHNHFHGD NP YCM DGTEQLKDGKDLGP
Sbjct: 467 SLRHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANPKYCMDDGTEQLKDGKDLGP 526

Query: 488 CKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDD 547
           CKICGN VEG +KY +CSHLFCPHKCYHTRCLTKKQLKSYD CWYCPSCLCRACLINQDD
Sbjct: 527 CKICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYDACWYCPSCLCRACLINQDD 576

Query: 548 DKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQSKRG 607
           DKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+AIR+VKMAYENFENKQSKRG
Sbjct: 587 DKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIRSVKMAYENFENKQSKRG 576

Query: 608 KDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANL 656
           KDTF   GN GKKR NGG+EE DTG GGMDMLLTAAKTLNYEEGLANL
Sbjct: 647 KDTF---GNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNYEEGLANL 576

BLAST of Lsi11G009910 vs. NCBI nr
Match: TYK23258.1 (remodeling and spacing factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 961.4 bits (2484), Expect = 3.9e-276
Identity = 485/646 (75.08%), Postives = 496/646 (76.78%), Query Frame = 0

Query: 10  VEETLHTLRGINYCEHVHSPMVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLA 69
           VEETLHTLRGI  CEHVHSPMVNLD SPEDLWRSV LQQICQSSGV GGNVPTCVQDGLA
Sbjct: 47  VEETLHTLRGIGSCEHVHSPMVNLDESPEDLWRSVWLQQICQSSGVIGGNVPTCVQDGLA 106

Query: 70  SHSGTNDRSRFRFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENGDV 129
           SHSGTNDRSRFR              KFD QDANSNNDLA TG VSS VQMASHRENGDV
Sbjct: 107 SHSGTNDRSRFR--------------KFDAQDANSNNDLAHTGSVSSTVQMASHRENGDV 166

Query: 130 SNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRIK 189
           SNGSLENSNRCSVNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSRIK
Sbjct: 167 SNGSLENSNRCSVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSRIK 226

Query: 190 EGAYENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLFHP 249
           EGAYENS  LFLSD+QQ                                           
Sbjct: 227 EGAYENSSALFLSDIQQ------------------------------------------- 286

Query: 250 DYCAKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRTTY 309
                                            IWRKFQAIGTELVSLAE LSDFSRTTY
Sbjct: 287 ---------------------------------IWRKFQAIGTELVSLAESLSDFSRTTY 346

Query: 310 REKTICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHMDG 369
           REK                         VGVSG NVFEDGKHE S WDSPSHAKAEHMDG
Sbjct: 347 REK-------------------------VGVSGRNVFEDGKHEDSIWDSPSHAKAEHMDG 406

Query: 370 YGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGFSL 429
           YGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCA+CIASGFSL
Sbjct: 407 YGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCATCIASGFSL 466

Query: 430 RHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKDLGPCK 489
           RHDNC VC+RLNTPTTL NGV  ILE+SEHNHFHGD NP YCM DGTEQLKDGKDLGPCK
Sbjct: 467 RHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANPKYCMDDGTEQLKDGKDLGPCK 526

Query: 490 ICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDDDK 549
           ICGN VEG +KY +CSHLFCPHKCYHTRCLTKKQLKSYD CWYCPSCLCRACLINQDDDK
Sbjct: 527 ICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYDACWYCPSCLCRACLINQDDDK 574

Query: 550 IVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQSKRGKD 609
           IVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+AIR+VKMAYENFENKQSKRGKD
Sbjct: 587 IVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIRSVKMAYENFENKQSKRGKD 574

Query: 610 TFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANL 656
           TF   GN GKKR NGG+EE DTG GGMDMLLTAAKTLNYEEGLANL
Sbjct: 647 TF---GNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNYEEGLANL 574

BLAST of Lsi11G009910 vs. NCBI nr
Match: XP_038897858.1 (PHD finger protein EHD3 [Benincasa hispida])

HSP 1 Score: 953.7 bits (2464), Expect = 8.0e-274
Identity = 484/648 (74.69%), Postives = 500/648 (77.16%), Query Frame = 0

Query: 9   TVEETLHTLRGINYCEHVHSPMVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGL 68
           TVEETL TLRGIN CEHVHSPMVNLD SPEDLWRSV LQQICQSSGV GGNVP CVQDGL
Sbjct: 83  TVEETLQTLRGINSCEHVHSPMVNLDESPEDLWRSVWLQQICQSSGVTGGNVPMCVQDGL 142

Query: 69  ASHSGTNDRSRFRFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENGD 128
           ASHSGTNDRSRFR              KFD Q ANSNNDLARTG VSS V++ASHRENGD
Sbjct: 143 ASHSGTNDRSRFR--------------KFDAQGANSNNDLARTGSVSSTVRLASHRENGD 202

Query: 129 VSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRI 188
            SNGSLENSN+CSVNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSRI
Sbjct: 203 ASNGSLENSNKCSVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSRI 262

Query: 189 KEGAYENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLFH 248
           KEGAYENS  LFLSD+QQ                                          
Sbjct: 263 KEGAYENSSTLFLSDIQQ------------------------------------------ 322

Query: 249 PDYCAKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRTT 308
                                             IWRKFQAIGTELVSLAE LSDFSRTT
Sbjct: 323 ----------------------------------IWRKFQAIGTELVSLAESLSDFSRTT 382

Query: 309 YREKTICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHMD 368
           Y+EK                         VGVSG NVF+DGKHE STWDS SHAKAEHMD
Sbjct: 383 YQEK-------------------------VGVSGRNVFQDGKHEDSTWDSHSHAKAEHMD 442

Query: 369 GYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGFS 428
           GYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCA+CIASGFS
Sbjct: 443 GYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCANCIASGFS 502

Query: 429 LRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKDLGPC 488
           LRHDNC VCERLN PTTL NGV+ ILE+SEHN  HGD+NPNYCM DGTEQLK+GKDLGPC
Sbjct: 503 LRHDNCVVCERLNIPTTLANGVDVILETSEHN--HGDENPNYCMEDGTEQLKEGKDLGPC 562

Query: 489 KICGNG-VEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDD 548
           KICGNG VEG DKYRICSHLFCPHK YH RCLT KQLKSYDTCWYCPSCLCRACLINQDD
Sbjct: 563 KICGNGVVEGDDKYRICSHLFCPHKYYHIRCLTMKQLKSYDTCWYCPSCLCRACLINQDD 613

Query: 549 DKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQSKRG 608
           DKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+AIR+VKMAYENFENKQSKRG
Sbjct: 623 DKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIRSVKMAYENFENKQSKRG 613

Query: 609 KDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANL 656
           KDTFG YGNSGK+RINGGDEE DTGRGGMDMLLTAAKTLNYEEGLANL
Sbjct: 683 KDTFGVYGNSGKERINGGDEESDTGRGGMDMLLTAAKTLNYEEGLANL 613

BLAST of Lsi11G009910 vs. NCBI nr
Match: XP_004139798.1 (PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_011658995.1 PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_031744612.1 PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_031744613.1 PHD finger protein EHD3 isoform X1 [Cucumis sativus] >KAE8646065.1 hypothetical protein Csa_016584 [Cucumis sativus])

HSP 1 Score: 945.7 bits (2443), Expect = 2.2e-271
Identity = 478/647 (73.88%), Postives = 494/647 (76.35%), Query Frame = 0

Query: 9   TVEETLHTLRGINYCEHVHSPMVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGL 68
           TVEETLHTLRGI+ CEH HSPMVNLD SPEDLWRSV LQQICQSSGV GGNV  CVQDGL
Sbjct: 46  TVEETLHTLRGIDSCEHAHSPMVNLDESPEDLWRSVWLQQICQSSGVIGGNVLMCVQDGL 105

Query: 69  ASHSGTNDRSRFRFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENGD 128
           ASHSGTNDRSRF+              KFD QDANSNND A T  VSS VQMASHRENGD
Sbjct: 106 ASHSGTNDRSRFK--------------KFDAQDANSNNDHAHTVSVSSIVQMASHRENGD 165

Query: 129 VSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRI 188
           +SNGSLENSNRC+VNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSRI
Sbjct: 166 ISNGSLENSNRCTVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSRI 225

Query: 189 KEGAYENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLFH 248
           KEGAYENS  LFLSD+QQ                                          
Sbjct: 226 KEGAYENSSTLFLSDIQQ------------------------------------------ 285

Query: 249 PDYCAKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRTT 308
                                             IWRKFQAIGTELVSLAE LSDFSRTT
Sbjct: 286 ----------------------------------IWRKFQAIGTELVSLAESLSDFSRTT 345

Query: 309 YREKTICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHMD 368
           YREK                         VGVSG NVFEDGKHE S WDSPSHAKAEH D
Sbjct: 346 YREK-------------------------VGVSGRNVFEDGKHEDSIWDSPSHAKAEHTD 405

Query: 369 GYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGFS 428
           GYGAYK+CACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCA+CIASGFS
Sbjct: 406 GYGAYKICACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCATCIASGFS 465

Query: 429 LRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKDLGPC 488
           LRHDNC VC+RLNTPTTL NGV+ ILE+SEHNHF GD+NP YCM DGTEQLKDGKDLGPC
Sbjct: 466 LRHDNCVVCDRLNTPTTLANGVDGILETSEHNHFDGDENPKYCMDDGTEQLKDGKDLGPC 525

Query: 489 KICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDDD 548
           KICGN VEG +KY ICSHLFCPHKCYHTRCLTKKQLKSYD CWYCPSCLCRACLINQDDD
Sbjct: 526 KICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDACWYCPSCLCRACLINQDDD 574

Query: 549 KIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQSKRGK 608
           KIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+AIR+VKMAYENFENKQSKRGK
Sbjct: 586 KIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIRSVKMAYENFENKQSKRGK 574

Query: 609 DTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANL 656
           DT    GNSGKKRINGGDEE D GRGGMDMLLTAAKTLNYEEGLANL
Sbjct: 646 DT---CGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLANL 574

BLAST of Lsi11G009910 vs. NCBI nr
Match: XP_022975583.1 (PHD finger protein EHD3-like [Cucurbita maxima] >XP_022975586.1 PHD finger protein EHD3-like [Cucurbita maxima] >XP_022975591.1 PHD finger protein EHD3-like [Cucurbita maxima])

HSP 1 Score: 926.0 bits (2392), Expect = 1.8e-265
Identity = 467/647 (72.18%), Postives = 486/647 (75.12%), Query Frame = 0

Query: 9   TVEETLHTLRGINYCEHVHSPMVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGL 68
           TVEETLH LRG N C+HVH PMVNLD SP+DLWRSVL++Q+C  S VNG NVP CV DGL
Sbjct: 83  TVEETLHLLRGSNSCDHVHPPMVNLDESPDDLWRSVLVKQMCHLSSVNGDNVPMCVHDGL 142

Query: 69  ASHSGTNDRSRFRFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENGD 128
           A++SG ND SRFR              KFD QDANSNNDLARTG VSS VQMASHRENG 
Sbjct: 143 ATNSGANDPSRFR--------------KFDAQDANSNNDLARTGSVSSTVQMASHRENGV 202

Query: 129 VSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRI 188
           VSNGSLEN +RCSVNESC RAF SIIDSQKFISLCKLL ENFRGIKADNVFDFSLVNSRI
Sbjct: 203 VSNGSLENPDRCSVNESCWRAFLSIIDSQKFISLCKLLSENFRGIKADNVFDFSLVNSRI 262

Query: 189 KEGAYENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLFH 248
           KEGAYENSP LFLSDVQQ                                          
Sbjct: 263 KEGAYENSPTLFLSDVQQ------------------------------------------ 322

Query: 249 PDYCAKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRTT 308
                                             IWRKFQAIGTELVSLAE LSDFSRTT
Sbjct: 323 ----------------------------------IWRKFQAIGTELVSLAESLSDFSRTT 382

Query: 309 YREKTICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHMD 368
           YREK                         VGVSG NVFEDGKHE STW+SPSHAKAEHMD
Sbjct: 383 YREK-------------------------VGVSGRNVFEDGKHESSTWESPSHAKAEHMD 442

Query: 369 GYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGFS 428
           GYGAYKVCACRSCGEKAEGI+CLVCDSCEEIYHISCIKPPVKEIPLKSWYCASC  SGFS
Sbjct: 443 GYGAYKVCACRSCGEKAEGINCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCTGSGFS 502

Query: 429 LRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKDLGPC 488
           LRHDNC VCERLNTPT L NGV EILE+SEHNHFHGD NPNYC  DG EQLKD +DLGPC
Sbjct: 503 LRHDNCVVCERLNTPTMLANGVGEILETSEHNHFHGDDNPNYCTDDGFEQLKDSQDLGPC 562

Query: 489 KICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDDD 548
           KICGNGVEGGDKYR+CSHLFCPH+ YHTRCLTK QLKSYDTCWYCPSCLCRACL+NQDDD
Sbjct: 563 KICGNGVEGGDKYRMCSHLFCPHQFYHTRCLTKNQLKSYDTCWYCPSCLCRACLVNQDDD 611

Query: 549 KIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQSKRGK 608
           KIVLCDGCDHG+HIYCMRPPLAAIPKG+WFCSKC AGI+AIR VKMAYENFENK+SKRGK
Sbjct: 623 KIVLCDGCDHGYHIYCMRPPLAAIPKGQWFCSKCEAGIQAIRRVKMAYENFENKRSKRGK 611

Query: 609 DTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANL 656
           DTF   G SGKKRINGGDEE DTGRGGMDMLLTAAKTLNYEEGL NL
Sbjct: 683 DTF---GKSGKKRINGGDEESDTGRGGMDMLLTAAKTLNYEEGLTNL 611

BLAST of Lsi11G009910 vs. TAIR 10
Match: AT1G77250.1 (RING/FYVE/PHD-type zinc finger family protein )

HSP 1 Score: 295.8 bits (756), Expect = 8.5e-80
Identity = 173/529 (32.70%), Postives = 247/529 (46.69%), Query Frame = 0

Query: 133 SLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRIKEGA 192
           S E++N  +V   C+     ++ S++F SL +LL EN +G+K D+    +L+++R+KEG 
Sbjct: 113 SSESTNHETVTAGCQHVLSHVLASKEFASLNRLLSENLQGVKIDDFTSRTLIDTRMKEGV 172

Query: 193 YENSPMLFLSDVQQAIFDYLVSLFIVTLSYIFAELHVELFIKSQTFKHTVFFSLFHPDYC 252
           YE SP+LF +D+Q+                                              
Sbjct: 173 YEGSPLLFSTDLQE---------------------------------------------- 232

Query: 253 AKYAFPHFLISKLVEVLLFVGVGIVFSTTAIWRKFQAIGTELVSLAECLSDFSRTTYREK 312
                                         +W+K Q +G ++  LA  L + SRT+Y+E+
Sbjct: 233 ------------------------------VWQKMQDVGNDMAVLANSLLELSRTSYKEQ 292

Query: 313 TICFSHLYPTFFLRNAIWFGLQSFVVGVSGCNVFEDGKHEYSTWDSPSHAKAEHMDGYGA 372
                               L+ F  G                 +S     AE++     
Sbjct: 293 --------------------LKQFYTG-----------------ESKPCPNAENIRNDSV 352

Query: 373 YKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGFSLRHD 432
             +  C+ CGEKAE  DCL CD CE++YH+SC +P  K +P  SWYC  C + G    H+
Sbjct: 353 SDI--CKLCGEKAEARDCLACDHCEDMYHVSCAQPGGKGMPTHSWYCLDCTSKGIGSPHE 412

Query: 433 NCAVCERLNTPTTLVNGVEEILESSE--HNHFHGDKNPNYCMGDGTEQLKDGKDLGPCKI 492
           NC VCE++ T   +      +  S+E   +    ++N +  M      ++  +D   C+ 
Sbjct: 413 NCVVCEKMKTQGMMKTDNRSVDTSTECKEDSNESEENSSCNMNHEVHHVEMSRDSELCRT 472

Query: 493 CGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDDDKI 552
           CG  V+ G KY  C H FCPHK YH RCLT +Q+K +   WYC SCLCR CL ++DDDKI
Sbjct: 473 CGTKVDSGGKYITCDHPFCPHKYYHIRCLTSRQIKLHGVRWYCSSCLCRNCLTDKDDDKI 522

Query: 553 VLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYE-NFENKQSKRGKD 612
           VLCDGCD  +HIYCMRPP  ++P G+WFC+ C A I  ++  + A+E   E  Q ++G  
Sbjct: 533 VLCDGCDDAYHIYCMRPPCESVPNGEWFCTACKAAILKVQKARKAFEKKMETVQKQKGIK 522

Query: 613 TFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANLSYK 659
                G    K  NG   ELD   GGMDMLL AA TL  EE +   S K
Sbjct: 593 PKNLQGKPQSKD-NG---ELDQSVGGMDMLLNAADTLKDEEQMTFQSIK 522

BLAST of Lsi11G009910 vs. TAIR 10
Match: AT3G01460.1 (methyl-CPG-binding domain 9 )

HSP 1 Score: 71.2 bits (173), Expect = 3.4e-12
Identity = 27/72 (37.50%), Postives = 46/72 (63.89%), Query Frame = 0

Query: 537  LCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAY 596
            +C+ C +++DDD ++LCD CD  +H YC+ PPL  IP G W+C  C   + A R  + A 
Sbjct: 1289 VCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSC---VIAKRMAQEAL 1348

Query: 597  ENFENKQSKRGK 609
            E+++  + ++G+
Sbjct: 1349 ESYKLVRRRKGR 1357


HSP 2 Score: 48.9 bits (115), Expect = 1.8e-05
Identity = 28/93 (30.11%), Postives = 43/93 (46.24%), Query Frame = 0

Query: 342 GCNVFEDGKHEY-------STWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGID-CLVC 401
           GC   +D   EY       S  D+P  A     +     +  +C +CG + E I+  +VC
Sbjct: 43  GCTAGQDDDGEYEPVEVVRSIHDNPDPAPGAPAEVPEPDRDASCGACG-RPESIELVVVC 102

Query: 402 DSCEEIYHISCIKPPVKEIPLKSWYCASCIASG 427
           D+CE  +H+SC+   V+  P   W C+ C   G
Sbjct: 103 DACERGFHMSCVNDGVEAAPSADWMCSDCRTGG 134

BLAST of Lsi11G009910 vs. TAIR 10
Match: AT5G24330.1 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 )

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-10
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 0

Query: 537 LCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCA 584
           +C  C   +   K++LCD CD GFH++C+RP L ++PKG WFC  C+
Sbjct: 34  VCEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCS 80

BLAST of Lsi11G009910 vs. TAIR 10
Match: AT5G09790.1 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 )

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-08
Identity = 20/46 (43.48%), Postives = 29/46 (63.04%), Query Frame = 0

Query: 538 CRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCA 584
           C  C   + DD+++LCD CD GFH+ C+RP +  +P G W C  C+
Sbjct: 67  CEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDCS 112

BLAST of Lsi11G009910 vs. TAIR 10
Match: AT5G09790.2 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 )

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-08
Identity = 20/46 (43.48%), Postives = 29/46 (63.04%), Query Frame = 0

Query: 538 CRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCA 584
           C  C   + DD+++LCD CD GFH+ C+RP +  +P G W C  C+
Sbjct: 67  CEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDCS 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q6ZJM97.6e-4925.82PHD finger protein EHD3 OS=Oryza sativa subsp. japonica OX=39947 GN=EHD3 PE=1 SV... [more]
Q38JA73.3e-1243.75Lysine-specific demethylase 5C OS=Canis lupus familiaris OX=9615 GN=KDM5C PE=2 S... [more]
P412293.3e-1243.75Lysine-specific demethylase 5C OS=Homo sapiens OX=9606 GN=KDM5C PE=1 SV=2[more]
P412303.3e-1243.75Lysine-specific demethylase 5C OS=Mus musculus OX=10090 GN=Kdm5c PE=1 SV=4[more]
A1YVX43.3e-1243.75Lysine-specific demethylase 5C OS=Sus scrofa OX=9823 GN=KDM5C PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S4DWX31.4e-27674.85remodeling and spacing factor 1 OS=Cucumis melo OX=3656 GN=LOC103490198 PE=4 SV=... [more]
A0A5D3DIH31.9e-27675.08Remodeling and spacing factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A6J1IEM08.7e-26672.18PHD finger protein EHD3-like OS=Cucurbita maxima OX=3661 GN=LOC111475137 PE=4 SV... [more]
A0A6J1F8631.6e-26472.02PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111442986 PE=4 ... [more]
A0A6J1EE291.3e-25370.05PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111433442 PE=4 ... [more]
Match NameE-valueIdentityDescription
XP_016900482.13.0e-27674.85PREDICTED: remodeling and spacing factor 1 [Cucumis melo][more]
TYK23258.13.9e-27675.08remodeling and spacing factor 1 [Cucumis melo var. makuwa][more]
XP_038897858.18.0e-27474.69PHD finger protein EHD3 [Benincasa hispida][more]
XP_004139798.12.2e-27173.88PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_011658995.1 PHD finger ... [more]
XP_022975583.11.8e-26572.18PHD finger protein EHD3-like [Cucurbita maxima] >XP_022975586.1 PHD finger prote... [more]
Match NameE-valueIdentityDescription
AT1G77250.18.5e-8032.70RING/FYVE/PHD-type zinc finger family protein [more]
AT3G01460.13.4e-1237.50methyl-CPG-binding domain 9 [more]
AT5G24330.11.4e-1046.81ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 [more]
AT5G09790.12.3e-0843.48ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 [more]
AT5G09790.22.3e-0843.48ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 487..537
e-value: 0.065
score: 22.4
coord: 540..583
e-value: 4.2E-10
score: 49.6
coord: 377..423
e-value: 1.1E-8
score: 44.9
NoneNo IPR availableGENE3D2.30.30.1150coord: 344..425
e-value: 3.7E-14
score: 55.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 608..628
NoneNo IPR availablePANTHERPTHR10615HISTONE ACETYLTRANSFERASEcoord: 126..650
NoneNo IPR availablePANTHERPTHR10615:SF190D4, ISOFORM Acoord: 126..650
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 538..583
e-value: 1.9E-12
score: 46.8
coord: 378..423
e-value: 1.1E-7
score: 31.6
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 375..425
score: 8.9293
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 535..585
score: 9.8727
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 537..584
e-value: 1.2E-18
score: 68.7
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 375..425
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 538..586

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G009910.1Lsi11G009910.1mRNA