Lsi11G009840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G009840
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	haloacid dehalogenase-like hydrolase domain-containing protein 3
Location	chr11: 16324286 .. 16334732 (-)
RNA-Seq Expression	Lsi11G009840
Synteny	Lsi11G009840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAAAAAAAAGAAACCCTTCAACTTCCGCTTTTAAACATGCACTTAACGAATATCGTCTCCATTTTAAAGTGTGTTGGTAAATGCGGTCCCTATTTTGTGGTTTTGAGTGTTGGCCTTGAACAGAGGAGAGAGAGCTGCATTCCAGACGACATCGGAGAAACCAAGGGCAGGGGAAGCTGCAGGCGACCAGCGACGGCGAGGGAAATTTCTCCACAATTTTTTAACCTAAACCACCGTGGGGCGCCATTGGGTTGATGGAGTTGTACATTGTTAGGTGCTCGCACGGCAGGAATCTCTTTAAAGTCTTCAAGCCCTTCCCTGTTTCTCTCAAAACGAGCATTTCCAAGCTCCACCACATGCCAATTCAAAACGGTTAGATTCCTTCATGAGCTTGGACTGGATGATTTTGTGACTGTATATCCGAACCCAATTTTCATTTTCTTTTGTTTATCTGAAAGTTAGTTGGTGGAGGCTCAGTTAATAGAGCTTATGATGCATTGCTCTTGGATGCTGGAGGAACGCTACTGCAGTTGGCAAAGCCAGTTGAAGAGACTTACGCATCCATTGGCTCCAAATATGGTGAGTGTTTCTTTTTTCTTTTGCCATAATTCCGAGGTCTACAACTTCACCTTAGTCTGAACCTAGAGGGAGAAGAGAGGCAAAAGAGTATGGAATTTTAACTGCCAACAGTAATTTTTTACTGCATTCCGGACTGTCATTCATTGTCATTTGGGTTTAATCAGACAAACAATTTGCAGCTTTGGCTGTCAAATTACCATTGATACCTTGCTGCAGTTTGCTTGAAAATATCACTCCTACAGTCCTACTTATTATTTTTTACTCCCGTTTGTTATTTTTTTTAAACATGACTTTAGTACTTCCAAAATTGAATTGTTTTAATGAATCTTTGGGGATTTTTTGAAAGAAAAAGGTATTGATCATCAGTCTACATGTCTGGATACTCCTCAACAATATAGAATTGTTGAAATAAGAAATAGACCTTTACTTGAAGTAGCATTTTCATGCATGTTGCAAAATATTTATGGCGGAAACTATTCTCATAGGTACCTACCTCATAAATAGGATGCCTAGTAAGATAAATTTTAAAACTCCTACTGATTGTTTTAAAATTGTTCTCCAACATCCCGTATATATTCTGATTTACCTCTTAAAGTTTTTTTGATGTACTACTTATGTTCACATACCCAGTCACTTTTGCTCCAAGCTTGATCATAGGGCTGTCAAATGCATCTTTTTGGGTTACTCTTCAAGTAGACAATGTTATAAATGTTTTGATCCTTAGTAAAATTTCTTTTTTGTGAGTATGGATGTGCCTTTTTCAGAAAACCTTTACGGGGAGAAGCCAAATGTTGAAGATAATTTTTGGGATATTTGTGTTCCTTTTTCTAGCCTTACTTGTCTAAATGTTACTAGTCCTTTGATGCTAAGTGTAGACACTTCTCAATCAGGGGATGAAATACCACAAAATGATCATACTGATCAAGTTCTTGAGTTTAAGTTTTACACTAGAAGAAAATTCGATCAAGGAACCAAGACCAGATAGATGATCCTTCATCGAACTAATCTGAGACTTCAGGAATGAAACTAAAGAACCGGATAATCTTTGTTCCATCACTACATCTGACCTTGATCATATTCCTAGGAGTGTACCACTTGTGTCTGATCTTAATGTTCCCATAACCATTAGAAAAGGTATTAGGAGTTGTACCAAATACCCTATTGCAAATCTACATGTCATATAAAAAATTGTCAGAGTCATAAAGCCTTCACATCTAGGATAAACGACTTGTTTGTTCCAAGGAACATACATGAGGCCTTAGAAGATCCAATTTGGAAAGTTGCAATTATGGAGGAGATAAATGTTCTAAAACAAAATGGTACTTGGGAAATAATAGTGTTACCAAAGGATAAGAAACCAGTAGGCTATAAATGGGTATTTACCATAAAATGTAATGCAAATGGTAGTATTGAAAGATATAAGGCCAGACTTATAGCTAAAGACATAACTCTGATGTATGGGATTGATCATAAAAAAAAAATGTTTGCTCCCATTGCCAAATTAACTCTATTAGAGTTCTTCTATCTCTTGCAGTTAGTGCAGTTAATTTAGATTGGCCTAGACCAACTAGACATGAAAAATGGCTTCCACAATGGTGAACTGGATGAAGAAGTTTTTATGAGTTTACCACCTGGTTCTGGAAAGGAACTCGGTCACAGTAAAATTTGCAAACTAAAGAAATCTTTTTACAATCTTAAGTAGTCTCCAAGAGCTTGGTTTGAGCGTTTTGGTAAAGTCATGTCCAGTTATGATTTCATCAAAGTCAAGCAGATCGTACTATATTTTATAAATACTTTGAGAGTAATAAAATCTCAATCTTAATTGTCTATATAGTTGAAATCGTTCTCACAGGGCACGATGAAACAAGTTTAGTTGATCTCAAGAAAAACCTTGCAAGTGAGTTTTAAATCAAGGACGTGGGAACGTTGAAATATTTTCTAGGAATGGTATTTGCAAGATCAAAGAAGGGCATCTTTGTTAACCAATGGAAATATGTTTTGGACTTACTTGAAGAAGCAAGATTACTTGGCTGCAAGGTAGCAGAAAACCCATGTTGAACCTAATTTGAAGTTGCAAATAGCCAAAGCAAAAGCAAAAGGAATTTAAGACAAGGAGCGATACTAGAGACATGTTGGGAGATTAATTTATCTGTCACATACGTGTCCTGACATTGCATATGACATAATTCATTTTGAAGCTGCCTATAGGATATTGAGATATATAAAAGGAACTCCCTGGAAAGGTGTTTTATTTATTTTTGACAAATATGTGGGGTGGGAGGATCAAACCTTTCACCTCGAAGTTGTCTAACATACTTGATGCCAGTTGAGCTACGCCCATTTTTGGCAAAGGTGTTTTATTTAAAAACACAATCACTCCCAAATAGAAATTTACACTGATGCAGATAGGCTAGAAGTGCTATAGATAGAAGATCTACTTCAGGTTACTGTTCCTTTCTTGGAGGAAACCTGGTTACATGGAGAAGCAAAAAGCAAATTTGGTGGCCAGAAGGAGTGTTGAAGCAGAATTTAGAGTTTTAGCGCATGTAATTTTTAAAGACATGGATTAAAAGGATACTTGAAGAATTGAAGTTTTCGCAGAAGGCACATATTCGGATTTATTGTGATAATAAAGCTACCATTTCTACTGCTCATAATCCAGTTCTACATGATAGAACTAAACATATTGAAGTTGACAAACATTTTATTAAAGAGAAGATTGATACACGTGCAATATGTATTCCTTATCTTTCAGCAACATAGCAAGTTGTTGATGTAATAACAAAGACACTACAAAAGAAGCATTTTAACCGAATGATTGACAAGTTGGCTATGGAATATATATTTAAACCAGCTTGAAGGGGAGTGTTGGCTTCCTATTATTCAGTAACACTTATGTGTATATATTAGTTATCAATATGTTCCTTTTGTATTGATATTCTCTTTCTTTATTTGTAATAGGTCTTTCTTTATAAGAAGACCTAAGTTGCACATATAAAATATCAATATAAGATCTTTTTGAGCCTCCCTGAGAGAACTCACAATGGTCTTGTGAAGGCATGAGATGCGAGTCGTGACGAATGGGGCGGTATTTGTCCACAGATCGAGCAGCAACCTTTTTTGGTATAAGGCAAATGTATGTTTCATTGAGGCTAGCATTGATGTTTCCATTCTTTCTTAAAAAAAATCTTGAAACACTCTCTTTATGTCATCTTTTTAAGGATGTTCCAATATTTCTAATTCTTCCTCTGGGCACTCTCTCACAGCCAATTGCCCTTTTTGTCTCTCTCCCCATTGGTATTCTATTTACAAAAAAGATGCAGAAACAAGGACGTCTCTTGGTTTGAATGTGTTTTTGCTATAAATTTTGGGGCTACATTCTTCACTCTTTTTGACAGACCATGCCCATATCAAAGGACCCACAACAGCTTTTATTTTATACACTTGGTGGTTATCCCTTTAAGGATGAGAAAAAGGCACTTTGGGGGAATTTTATTCATGCTTATTGCTGAACTCTTTGGCAAGAAAGAAACAATAGAATTTTCCAAGATAAGAAACTCCCCTACCATCGTTTTTTTGAATTTATAGTTAATTTGGCTGTATCTTGGTGCAAATGCTCTCCTATCTTCCGCTACTAGAGCTTTGCCTCCCTTCTTTCCAATTGGAGAGATGTGTTGTAATACACCACTTGGGGATCTCTCTGTTTTGTAATTTCATACTATCAATGAAATTGTTTCTTATTAAAAAAAGAAACAAACACAATATTTAATTCTCGGACATTAATTATTCTGCATATCCAAATACAAATATTTAATATCCTATATCCTAGACATTTAACTCCCAGATATAAAACTCTCAAATATTTATTATCCATACCCATCAAATTGAACTCATGATTCAAACTGGCCATTCCGGTCAATAACTATGATTTAGTACTTAACTACTTGGACAATAATATTATCAGCTTTTTATCTGCTGCTATTTAACTAGCATTATACCTTAATTTCCCTTGCATTTTAAAGTTTGCCGTTACAGTAAATAATTCAGTTATTGTCTATTGTTCAAAAAAAGCAAATAATTCAGTTACCTGTTTCTGTTCATCAATTATCAGTTTCTTTGTTCTTTTAGTCATCATGATTACGATGAATTTAGGTCTAACTAGCACTCCTGCTGAGATAAAGCAAGGATTTAGGAGAGCGTTTTCTGGTCCGTGGCCTCAAAAGCTACGTTACAAGGTTTGTATTCTCTTTATTGTTAGTTGATTAAGTTGCATGCAGAGTCGAATAAAAAATAGACTATATTCCGAAGTTTTGTCTCTCTATCCCTCTTAGTTGAGGAAATGCACGACTTGCGTGATCTGCTAACTTATGCCTACAGAGAGTGGTGCTTGGTTGCTTATAGATTTCTGTGATCTACTATCAAATTAGAATATTGTTCATGAGGTCACAGCCCTCATAATGCAACAGTTTTTTTTATATTCAAAGGCTAATTGGTTCCCCTAAATGGTTTATGCAATCACATTGTTTGGGAGGAGATATGGCTTGAAACAATTGTTGGGATTCGGACAGGGAGGGTAGAGATGCTGAAAAGGTGTTTGAACTATCTTGTTAGTTACCTGTTCGAGCTCCCTATCCAAGATGGTTTCTTCTCTTTTTTACTTTTTTTTTTTTTTTTTTTTTTTAAATTAAAATTTTTATAATGATTCTATCAATCAAAATGTTCCTTTGTAATCTATGTTTACTTTGGGGCTTGGGCATATTTTTTTTTGGGGGAAAAAATTTATCTAAACTCCTAAACTATGAGGGTTGCATCACTTAAAACCTCAAACTAATAATTATATAAATTAAAACTCTGGACTCAAATAAGTAAATCAATTTAGTCCCTACATTAGGATTCTATTTTAAAATCATTAATACATAGTTTTCACACGTGTGTAGGACTTCTTTAAATGTATGAATTAATTTAGATAATAGCACATTTTCATTAATGTGAGTGGTGTTTCATGACAGTGTAAGGTGTTCATCCATTTTTCTCTACTTATTTAAGAAGAATTACGTGATAATTTTTTCTCCTCTCATTGACTGTGAGTCTTTGGAGGTATTGAGCATTGTTTTTGTTATTTTCGATAAGTTGGGAGAAGGGAAGGGATGTTCGGTTTTGGGCTCCTAATCTCTCTGAGGGTTTCTCGTGCTGGTCACTTTTCCTCGCTCTTAATTATCCAATTAGAAAAAGAGTTGATTAGTTTGATTCTCTGAAAATGAAAACCAAACATGCTGGTTTGGTTCGATTTGGTTTTCCCCTTCTTCTTTGGACTAGGTTAATCTTTCCTTCTTGGACGACAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAAAAAAAAAAAAAAAAAAAAAAAAAACCATAAAAATGAAGTATTAAAAGCTTGGACCAACCTTCAAAGTCTCCTATTTCTCAGTCACGATATCTGAGAAATAGTGGCCAATCAGGGTTTATAGTCATGATTTAAGATTTATTAAAACTGTTTCATGTTCCTCTATATTCTGCATTTTTGCTCTAACCTTTTTGCTTGTAATATTTTGCTATTATTTTTATCCTCTGTATATTTCAGAATAAGTATTAGAAAAGTTGTTTGTTGCTATTTTATATGTTTTATTGTGGAAAAGCTACCCCATTGTTGGTTGTGTACTATATTGATAGGGAGATGGAAGGCCATTTTGGAAACTTGTTGTTTCAGAAGCCACTGGTTGTTCTGATAATAGTTACTTTGAAGAAGTCTATCAGGTGATGTTTTATGAACAACCTTTTTTAGTATTATTTCCACGGTCAAACTTTACCGCATAGAAAATGATTTGCATGCTTTGTAATAGCCATTCTTTTGGGAACATAAATTTTCTGATCAAGTTTTATTTCTATGTAGTGGTCTATCTATTTGTGTAAATATGTAACCAAGCCATTGAAATGCATAAACCAATTAACCAAGCCCGTGGACAAGGCCTAACTAGCTATATGAAAATGGGCTCCAATGTAAAGGAACTTGGTACCAGCTACTCAGTTTTTTCAATCTTCAGTGGGTCTTCTCTAATAATTTGAAAGAAAATGTCTTTCAAATTCTTACCGGTCCTATATTATTGGCTTTAATGGAAAATCTTTTTTCGTATTAATTTAGTTAGAACTCTTCTATAAGAGTTATGGTTGGAAAGAAATCGACAAAGTTTATTGAATTATGGTTGGAAAGAAATCAACAAAATTTTTAGAATCTATCTTTCCCATTCAAATAGATTTGATTCAACTCATCTTAAGGCTTCTTAACGGTGTTCTCTTTCAAATTTCTTTGGTCGTTCTTCAGTTCAAGACATTTGTAGAAGCTGGGATGGGATAATGTAAGACCCAAAAATGTGAGTTCAATTTATCTAGGAATACATGGAAGCCCTAAACTAAGAATAGTAGAATTACAATAAAGGACAAAAGACTAACCCCTCAAGTTGGAGCATATATGTTAATCATGCCTAACTTGTTACAAATGTAATCTATCGAACTCCATTTAAAGCTTTCGTGAAGATATCTACTAATTGCTCTCAATCTTCACATATCCGGTAGACACCAAACTTTTTTTTGTATTTTTTCTCAAAAAAATATATAGCATTCAGTTTCTACATGTTTAGTTTGCTCATGAAATGGTTGGATGCAACATGAAAGGCAGTTTGGTTGTCACACCACAATTTGGTCGAAACTATAAATATTGAGCCTAACTTGATCAAGAGTTGATGTACCCACATTATCTCACAAACTGATTGTGCCATAGCTTGTATTTTGATTCAATACTTGATCGTGAGACTATGTTTTGTTCCTTAGTTCTCCCTGAAACCAAACTGCCTTCAACAAAAACACAATAAATAACTAAAAGTTGATCATCCAGACTGAAACAAAATGAACCAAGCCCAAACAAAATGACCCAAGCTTGAAACTTCTGGAGCCGGGAAAAAAATTACCGTGAAGCTCGAAAAACAGCCAGACCTAAAAATTTTGCAGAACTTGTCAGTGACCTACAATTTTTAGATTCGAATTTCAGAAAGCCTTTGTCGGTGATCTACGATTTCTAGATTCAAGTTTCTGAAAGCCTTTGTTGATTTCCCAATTTTTCGTTTCACATTATATTTCCCTTTTGCACTTTTTGTAACTTTAATTTATGTGGTTTCTTTTGGTTTTTGATGAAAGTTTGTATCCTTTTCCAAAAAAAACAAAGAGACAGAACTAGTAGTAGATAGGAATACAAGAAACATCAATTATTTTGTGGCTCTTTGTTTGTCATCATTAAAATGAACTCTGTTTGCACCTTTTCAGTACTATGCAAATGGTGATGCATGGCATCTTCCAGATGGGGCTTATTCAACCCTGGGTGTTTTGAAAGATGCTGGAGGTTAAATTCAAAGTTCTTCCTTCATCTCCACAAGGATGGATGCAGGATTTTTGTCCATAGTGTTTTTAATGCCATGGGTTTTCTTGCACAGTTAGGTTGGCTGTTGTGTCCAATTTTGACACTCGGTTAAGGAAGCTATTGAAGGATCTAAATATTTTCGATATGTGAGGGAGCATGTTTCTCTTAACAAAATCTTTGTCTGTTTAATGACCTCATCTTTCTTTTATACCAAGCATATATATTCATTTGATGAGTTGATGAAAATTTTATTTTGCAGGTTTGACGCTGTTATAATATCGGCAGAAGTTGGATATGAAAAACCAGATGGAAAAATATTTGAAGCTGCGTTAGGTACACACTAGTCTCACCATTATTTAATACAACTTTACACTCCAAACATAGACTTTCTAACTCCAAGATATTAACTCCAGACTTCATAATTCAACTCAGTACCCCAAACACTCCTAGACTCTGAAATTGTCTCAGTTTCAGTTAATGTATATAGTTTCTTTACTAGAAAAATGAAATAGGATTGTTTGTTCTAGATCAACTTGGAGTCACGTCTGACAAAGCTGTGCACGTTGGAGATGACCAGAAGGCAGATAAGGAGGGAGCAAACGCCGTTGGAATAGCTTGCTGGTAAGACTATCGATTTTCATCTCTGAAACTCAAGGAGAGACTGCATGACAAAAAAGTATGATGTATGGCTCATTAAGTTGAAAATGTTGGGAATGACTAGTCAATTAATCATTTGTTGGAATAACTTGTCATAAACTTAGCGAAAGATTTATAAATGTATTTTCATATTTAATTTAAATTTGAAAACTGTTTTCAGTATTTAATTTATATATGAAACGTTTTCCTATTTAATTTAGATATGAAACGTTTGTGTATTTAATTTAGATCTAAAACGTTTTCTACATTTAATTTAGAAAGACGTTTTTGTTGGATTTTTTATAAAAAGAGAAAAAAAGGAGGAAGTTTTTTCGAGTTTTGGGCTGATTTCTCTCTATTTTAATGATTTAATTCTGAGCAAAGTTTTCACTCGATTCCAATCCTTCTTCGACGAGTGCACGTTTGAGAAGGGTGTTGTGTTAACCTTGGGGAGCAACCGGCTTTTGGCGATTTAGCACCGAGGTCGCGCCGATTTTGCTTTCAAGGCAGTGGTTTCCACGGCACAACAATTAAGATCCAAAATTGTTAGAAAATTTCTACACTCCATTTTTAACAGAAAACACATCAAAGTAATTCCCTTGACCCCCTCATGGTAATGAATGTGCATCAATCTGTATAAGCAGGCTATGGGGAAGTGATGTGATGACGTTCCAGGACGTTCAAAATCAAATCCTCATCCGACCCTCGAGCTTCTAAGCAGCCAATGTTGTAGTTCACTCCGCCCTGTGGGAGGGATATGAATCTGGCTTGGGTTCTAAACTCTTTCCTTTCAATCGGGGTTTTTGTTGTACATTGATAGCCAAAATTCTGGTGGATGCCTCACATTTCTTTTAAATAATAATGGAGTTATTGAGGATCTCACATTGAAAAAATTTAGGGACTTTACGCTCTTTGTAAGATAAAATATTTTTCTGATTGTCAATTGGTTTTGAGATGAAACCTCATATTATCTAATATGATATCTATGCTCATAAAGTTC

mRNA sequence

AAAAGAAAAAAAAAGAAACCCTTCAACTTCCGCTTTTAAACATGCACTTAACGAATATCGTCTCCATTTTAAAGTGTGTTGGTAAATGCGGTCCCTATTTTGTGGTTTTGAGTGTTGGCCTTGAACAGAGGAGAGAGAGCTGCATTCCAGACGACATCGGAGAAACCAAGGGCAGGGGAAGCTGCAGGCGACCAGCGACGGCGAGGGAAATTTCTCCACAATTTTTTAACCTAAACCACCGTGGGGCGCCATTGGGTTGATGGAGTTGTACATTGTTAGGTGCTCGCACGGCAGGAATCTCTTTAAAGTCTTCAAGCCCTTCCCTGTTTCTCTCAAAACGAGCATTTCCAAGCTCCACCACATGCCAATTCAAAACGTTGGTGGAGGCTCAGTTAATAGAGCTTATGATGCATTGCTCTTGGATGCTGGAGGAACGCTACTGCAGTTGGCAAAGCCAGTTGAAGAGACTTACGCATCCATTGGCTCCAAATATGGTCTAACTAGCACTCCTGCTGAGATAAAGCAAGGATTTAGGAGAGCGTTTTCTGGTCCGTGGCCTCAAAAGCTACGTTACAAGGGAGATGGAAGGCCATTTTGGAAACTTGTTGTTTCAGAAGCCACTGGTTGTTCTGATAATAGTTACTTTGAAGAAGTCTATCAGTACTATGCAAATGGTGATGCATGGCATCTTCCAGATGGGGCTTATTCAACCCTGGGTGTTTTGAAAGATGCTGGAGATCAACTTGGAGTCACGTCTGACAAAGCTGTGCACGTTGGAGATGACCAGAAGGCAGATAAGGAGGGAGCAAACGCCGTTGGAATAGCTTGCTGGCTATGGGGAAGTGATGTGATGACGTTCCAGGACGTTCAAAATCAAATCCTCATCCGACCCTCGAGCTTCTAAGCAGCCAATGTTGTAGTTCACTCCGCCCTGTGGGAGGGATATGAATCTGGCTTGGGTTCTAAACTCTTTCCTTTCAATCGGGGTTTTTGTTGTACATTGATAGCCAAAATTCTGGTGGATGCCTCACATTTCTTTTAAATAATAATGGAGTTATTGAGGATCTCACATTGAAAAAATTTAGGGACTTTACGCTCTTTGTAAGATAAAATATTTTTCTGATTGTCAATTGGTTTTGAGATGAAACCTCATATTATCTAATATGATATCTATGCTCATAAAGTTC

Coding sequence (CDS)

ATGGAGTTGTACATTGTTAGGTGCTCGCACGGCAGGAATCTCTTTAAAGTCTTCAAGCCCTTCCCTGTTTCTCTCAAAACGAGCATTTCCAAGCTCCACCACATGCCAATTCAAAACGTTGGTGGAGGCTCAGTTAATAGAGCTTATGATGCATTGCTCTTGGATGCTGGAGGAACGCTACTGCAGTTGGCAAAGCCAGTTGAAGAGACTTACGCATCCATTGGCTCCAAATATGGTCTAACTAGCACTCCTGCTGAGATAAAGCAAGGATTTAGGAGAGCGTTTTCTGGTCCGTGGCCTCAAAAGCTACGTTACAAGGGAGATGGAAGGCCATTTTGGAAACTTGTTGTTTCAGAAGCCACTGGTTGTTCTGATAATAGTTACTTTGAAGAAGTCTATCAGTACTATGCAAATGGTGATGCATGGCATCTTCCAGATGGGGCTTATTCAACCCTGGGTGTTTTGAAAGATGCTGGAGATCAACTTGGAGTCACGTCTGACAAAGCTGTGCACGTTGGAGATGACCAGAAGGCAGATAAGGAGGGAGCAAACGCCGTTGGAATAGCTTGCTGGCTATGGGGAAGTGATGTGATGACGTTCCAGGACGTTCAAAATCAAATCCTCATCCGACCCTCGAGCTTCTAA

Protein sequence

MELYIVRCSHGRNLFKVFKPFPVSLKTSISKLHHMPIQNVGGGSVNRAYDALLLDAGGTLLQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEATGCSDNSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAGDQLGVTSDKAVHVGDDQKADKEGANAVGIACWLWGSDVMTFQDVQNQILIRPSSF

Homology

[Close]

BLAST of Lsi11G009840 vs. ExPASy Swiss-Prot
Match: Q9BSH5 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Homo sapiens OX=9606 GN=HDHD3 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.8e-05
Identity = 39/127 (30.71%), Postives = 62/127 (48.82%), Query Frame = 0


Query: 52  LLLDAGGTLLQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAF---SGPWPQ-KLRYKG 111
           L  D   TLL+L  P+ E YA+    +GL   P+ ++QGFR+A+   S  +P   L +  
Sbjct: 10  LTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGL 69

Query: 112 DGRPFWKLVVSEA---TGCSDNS----YFEEVYQYYANGDAWHLPDGAYSTLGVLKDAGD 168
             R +W  VV +     G  D        E++Y+ +++   W + DGA  TL   +  G 
Sbjct: 70  TSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGL 129

[Close]

BLAST of Lsi11G009840 vs. ExPASy TrEMBL
Match: A0A1S3B3J5 (haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucumis melo OX=3656 GN=LOC103485772 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.7e-104
Identity = 193/263 (73.38%), Postives = 203/263 (77.19%), Query Frame = 0


Query: 1   MELYIVRCSHGRNLFKVFKPFPVSLKTSISKLHHMPIQNVGGGSVNRAYDALLLDAGGTL 60
           MEL I+RCSHGR+LF+VFKPFP+SLKTSIS  HHMPIQNVGGGS NRAYDALLLDAGGTL
Sbjct: 1   MELSILRCSHGRSLFRVFKPFPLSLKTSISNPHHMPIQNVGGGSSNRAYDALLLDAGGTL 60

Query: 61  LQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA 120
           LQLAKPVEETYASIGSKYGL STPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA
Sbjct: 61  LQLAKPVEETYASIGSKYGLNSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA 120

Query: 121 TGCSDNSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAG--------------------- 180
           TGCSD+SYFEEVYQYYANG+AWHLPDGAY+TLGVLKDAG                     
Sbjct: 121 TGCSDDSYFEEVYQYYANGEAWHLPDGAYATLGVLKDAGVRLAVVSNFDTRLRKLLKDLS 180

Query: 181 ----------------------------DQLGVTSDKAVHVGDDQKADKEGANAVGIACW 215
                                       DQL V SD AVHVGDDQKADKEGANAVGI CW
Sbjct: 181 VLDMFDAVIISAEVGYEKPDGKIFEAALDQLEVRSDNAVHVGDDQKADKEGANAVGIDCW 240

[Close]

BLAST of Lsi11G009840 vs. ExPASy TrEMBL
Match: A0A6J1I751 (haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471858 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.5e-89
Identity = 171/261 (65.52%), Postives = 189/261 (72.41%), Query Frame = 0


Query: 1   MELYIVRCSHGRNLFKVFKPFPVSLKTSISK---LHHMPIQNVGGGSVNRAYDALLLDAG 60
           M LY +RCSHG + F+  KP P+SLKTSI K     +MPIQNV GGSV+R YDALLLDAG
Sbjct: 1   MVLYSIRCSHGWSFFRAVKPIPLSLKTSIHKPRLFSNMPIQNVYGGSVHRVYDALLLDAG 60

Query: 61  GTLLQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVV 120
           GTLLQLAKPVEETYASIGSKYGL STPA+IKQGF++AFSGPWPQKLRY+GDGRPFWKLVV
Sbjct: 61  GTLLQLAKPVEETYASIGSKYGLVSTPADIKQGFKKAFSGPWPQKLRYQGDGRPFWKLVV 120

Query: 121 SEATGCSDNSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAG------------------ 180
           SEATGC+D+SYFE+VYQYYANGDAWHLP GAY+ L VLKDAG                  
Sbjct: 121 SEATGCADDSYFEDVYQYYANGDAWHLPPGAYAALTVLKDAGVKVAVVSNFDTRLRKLLK 180

Query: 181 -------------------------------DQLGVTSDKAVHVGDDQKADKEGANAVGI 210
                                          D+LGV ++KAVHVGDDQKADKEGAN VGI
Sbjct: 181 DLNVLDMFDAVIISAEVGYEKPDGQIFEAALDELGVAANKAVHVGDDQKADKEGANGVGI 240

[Close]

BLAST of Lsi11G009840 vs. ExPASy TrEMBL
Match: A0A6J1GIH5 (haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454453 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.3e-89
Identity = 171/261 (65.52%), Postives = 189/261 (72.41%), Query Frame = 0


Query: 1   MELYIVRCSHGRNLFKVFKPFPVSLKTSISK---LHHMPIQNVGGGSVNRAYDALLLDAG 60
           M LY +RCSHG + F+  KP P+SL+TSI K     +MPIQNV GGSV+R YDALLLDAG
Sbjct: 1   MVLYSIRCSHGWSFFRAVKPTPLSLRTSIHKPRLCSNMPIQNVYGGSVHRVYDALLLDAG 60

Query: 61  GTLLQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVV 120
           GTLLQLAKPVEETYASIGSKYGL STPA+IKQGF+RAFSGPWPQKLRY+GDGRPFWKLVV
Sbjct: 61  GTLLQLAKPVEETYASIGSKYGLVSTPADIKQGFKRAFSGPWPQKLRYQGDGRPFWKLVV 120

Query: 121 SEATGCSDNSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAG------------------ 180
           SEATGC+D+SYFE+VYQYYANGDAWHLP GAY+ L VLKDAG                  
Sbjct: 121 SEATGCADDSYFEDVYQYYANGDAWHLPPGAYAALTVLKDAGVKVAVVSNFDTRLRKLLK 180

Query: 181 -------------------------------DQLGVTSDKAVHVGDDQKADKEGANAVGI 210
                                          D+LGV ++KAVHVGDDQKADKEGAN VGI
Sbjct: 181 DLNVLDMFDAVIISAEVGYEKPDGQIFEAALDELGVAANKAVHVGDDQKADKEGANGVGI 240

[Close]

BLAST of Lsi11G009840 vs. ExPASy TrEMBL
Match: A0A6J1DQ94 (haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Momordica charantia OX=3673 GN=LOC111023230 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.9e-82
Identity = 161/240 (67.08%), Postives = 174/240 (72.50%), Query Frame = 0


Query: 1   MELYIVRCSHGRNLFKVFKPFPVSLKTSISKLHHMPIQNVGGGSVNRAYDALLLDAGGTL 60
           ME YIVRCSHGR+L + FKP PVSLKT +    + PI+NVGGGS+NRAYDALLLDAGGTL
Sbjct: 1   MESYIVRCSHGRSLLRAFKPVPVSLKTRLCS--NTPIRNVGGGSLNRAYDALLLDAGGTL 60

Query: 61  LQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA 120
           LQLAKPVEETYA+IGSKYGLTS+ AEIKQGFRRAFS PWPQKLRY+GDGRPFWKLVVSEA
Sbjct: 61  LQLAKPVEETYAAIGSKYGLTSSTAEIKQGFRRAFSAPWPQKLRYQGDGRPFWKLVVSEA 120

Query: 121 TGCSDNSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAG--------------------- 180
           TGC+D+SYFEEVYQYYANGDAWHLP GAY TL +LKDAG                     
Sbjct: 121 TGCADDSYFEEVYQYYANGDAWHLPHGAYETLIILKDAGVKVAVVSNFDTRLRKLLKDLN 180

Query: 181 ----------------------------DQLGVTSDKAVHVGDDQKADKEGANAVGIACW 192
                                       DQ+ VTSDKAVHVGDD KADKEGANAVGIACW
Sbjct: 181 VLDMFDAVIISSEVGYEKPDGKIFETALDQIDVTSDKAVHVGDDLKADKEGANAVGIACW 238

[Close]

BLAST of Lsi11G009840 vs. ExPASy TrEMBL
Match: A0A7N2L8Z5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.7e-75
Identity = 148/258 (57.36%), Postives = 169/258 (65.50%), Query Frame = 0


Query: 1   MELYIVRCSHGRNLFKVFKPFPVSLKTSISKLHHMPIQNVGGGSVNRAYDALLLDAGGTL 60
           ME  +++CSHG  LF+  KP  + L  SI     M I   GG    RAYD LLLDAGGTL
Sbjct: 1   METCLMKCSHGSALFRALKPLSLKLPNSI-HCSSMAIHTDGGRWTKRAYDTLLLDAGGTL 60

Query: 61  LQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA 120
           LQLAKPVEE YA+IGSKYGL++T AEIKQGFRRAF+ PWP+KLRY+GDGRPFWKLVVSEA
Sbjct: 61  LQLAKPVEEIYATIGSKYGLSATSAEIKQGFRRAFAAPWPEKLRYQGDGRPFWKLVVSEA 120

Query: 121 TGCSDNSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAG--------------------- 180
           TGC+DN YFEEVY+YYA GDAWHLPDGAY T+ +LKDAG                     
Sbjct: 121 TGCADNDYFEEVYEYYAKGDAWHLPDGAYETITLLKDAGVKIAVVSNFDTRLRKLLKDLN 180

Query: 181 ----------------------------DQLGVTSDKAVHVGDDQKADKEGANAVGIACW 210
                                       DQ+ V + KAVHVGDDQKADK+GANA+GI CW
Sbjct: 181 VLDLFDAVIISSEVGYEKPDIKIFKAALDQVNVKACKAVHVGDDQKADKDGANAIGIDCW 240

[Close]

BLAST of Lsi11G009840 vs. NCBI nr
Match: XP_038891067.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Benincasa hispida])

HSP 1 Score: 391.7 bits (1005), Expect = 4.0e-105
Identity = 196/258 (75.97%), Postives = 205/258 (79.46%), Query Frame = 0


Query: 1   MELYIVRCSHGRNLFKVFKPFPVSLKTSISKLHHMPIQNVGGGSVNRAYDALLLDAGGTL 60
           MEL ++RCSHGR+LF+VFKPFP+SLKTSISK HHMPIQNVGGGSVNRAYDALLLDAGGTL
Sbjct: 1   MELNLIRCSHGRSLFRVFKPFPLSLKTSISKPHHMPIQNVGGGSVNRAYDALLLDAGGTL 60

Query: 61  LQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA 120
           LQLAKPVEETYASIGSKYGLT+TPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA
Sbjct: 61  LQLAKPVEETYASIGSKYGLTNTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA 120

Query: 121 TGCSDNSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAG--------------------- 180
           TGCSD+SYFEEVYQYYANGDAWHLPDGA +TLGVLKDAG                     
Sbjct: 121 TGCSDDSYFEEVYQYYANGDAWHLPDGACATLGVLKDAGVRLAVVSNFDTRLRKLLKDLN 180

Query: 181 ----------------------------DQLGVTSDKAVHVGDDQKADKEGANAVGIACW 210
                                       DQLGVTSDKAVHVGDDQKADKEGANAVGIACW
Sbjct: 181 VLDMFDAVIISAEVGYEKPDGKIFEAALDQLGVTSDKAVHVGDDQKADKEGANAVGIACW 240

[Close]

BLAST of Lsi11G009840 vs. NCBI nr
Match: XP_008441699.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis melo])

HSP 1 Score: 387.1 bits (993), Expect = 9.8e-104
Identity = 193/263 (73.38%), Postives = 203/263 (77.19%), Query Frame = 0


Query: 1   MELYIVRCSHGRNLFKVFKPFPVSLKTSISKLHHMPIQNVGGGSVNRAYDALLLDAGGTL 60
           MEL I+RCSHGR+LF+VFKPFP+SLKTSIS  HHMPIQNVGGGS NRAYDALLLDAGGTL
Sbjct: 1   MELSILRCSHGRSLFRVFKPFPLSLKTSISNPHHMPIQNVGGGSSNRAYDALLLDAGGTL 60

Query: 61  LQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA 120
           LQLAKPVEETYASIGSKYGL STPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA
Sbjct: 61  LQLAKPVEETYASIGSKYGLNSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA 120

Query: 121 TGCSDNSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAG--------------------- 180
           TGCSD+SYFEEVYQYYANG+AWHLPDGAY+TLGVLKDAG                     
Sbjct: 121 TGCSDDSYFEEVYQYYANGEAWHLPDGAYATLGVLKDAGVRLAVVSNFDTRLRKLLKDLS 180

Query: 181 ----------------------------DQLGVTSDKAVHVGDDQKADKEGANAVGIACW 215
                                       DQL V SD AVHVGDDQKADKEGANAVGI CW
Sbjct: 181 VLDMFDAVIISAEVGYEKPDGKIFEAALDQLEVRSDNAVHVGDDQKADKEGANAVGIDCW 240

[Close]

BLAST of Lsi11G009840 vs. NCBI nr
Match: XP_011649049.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis sativus] >KAE8651752.1 hypothetical protein Csa_006069 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103
Identity = 191/258 (74.03%), Postives = 202/258 (78.29%), Query Frame = 0


Query: 1   MELYIVRCSHGRNLFKVFKPFPVSLKTSISKLHHMPIQNVGGGSVNRAYDALLLDAGGTL 60
           MEL I+RCSHGR+LF+VFKPFP+SLK SISK HHMPIQNVGGGS NRAYDALLLDAGGTL
Sbjct: 1   MELNILRCSHGRSLFRVFKPFPLSLKPSISKPHHMPIQNVGGGSFNRAYDALLLDAGGTL 60

Query: 61  LQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA 120
           LQLAKPVEETYASIGSKYGL STPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA
Sbjct: 61  LQLAKPVEETYASIGSKYGLNSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEA 120

Query: 121 TGCSDNSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAG--------------------- 180
           TGCSD+SYFEEVYQYYANG+AWHLPDGAY+TLGVLKDAG                     
Sbjct: 121 TGCSDDSYFEEVYQYYANGEAWHLPDGAYATLGVLKDAGVRLAVVSNFDTRLRKLLKDLS 180

Query: 181 ----------------------------DQLGVTSDKAVHVGDDQKADKEGANAVGIACW 210
                                       DQLGV SDKAVHVGDDQKADKEGANAVGI CW
Sbjct: 181 VLDMFDAVIISAEVGYEKPDGEIFEAALDQLGVRSDKAVHVGDDQKADKEGANAVGIDCW 240

[Close]

BLAST of Lsi11G009840 vs. NCBI nr
Match: XP_022973291.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform X1 [Cucurbita maxima] >XP_022973292.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform X1 [Cucurbita maxima])

HSP 1 Score: 339.0 bits (868), Expect = 3.1e-89
Identity = 171/261 (65.52%), Postives = 189/261 (72.41%), Query Frame = 0


Query: 1   MELYIVRCSHGRNLFKVFKPFPVSLKTSISK---LHHMPIQNVGGGSVNRAYDALLLDAG 60
           M LY +RCSHG + F+  KP P+SLKTSI K     +MPIQNV GGSV+R YDALLLDAG
Sbjct: 1   MVLYSIRCSHGWSFFRAVKPIPLSLKTSIHKPRLFSNMPIQNVYGGSVHRVYDALLLDAG 60

Query: 61  GTLLQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVV 120
           GTLLQLAKPVEETYASIGSKYGL STPA+IKQGF++AFSGPWPQKLRY+GDGRPFWKLVV
Sbjct: 61  GTLLQLAKPVEETYASIGSKYGLVSTPADIKQGFKKAFSGPWPQKLRYQGDGRPFWKLVV 120

Query: 121 SEATGCSDNSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAG------------------ 180
           SEATGC+D+SYFE+VYQYYANGDAWHLP GAY+ L VLKDAG                  
Sbjct: 121 SEATGCADDSYFEDVYQYYANGDAWHLPPGAYAALTVLKDAGVKVAVVSNFDTRLRKLLK 180

Query: 181 -------------------------------DQLGVTSDKAVHVGDDQKADKEGANAVGI 210
                                          D+LGV ++KAVHVGDDQKADKEGAN VGI
Sbjct: 181 DLNVLDMFDAVIISAEVGYEKPDGQIFEAALDELGVAANKAVHVGDDQKADKEGANGVGI 240

[Close]

BLAST of Lsi11G009840 vs. NCBI nr
Match: XP_022951708.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 337.8 bits (865), Expect = 6.8e-89
Identity = 171/261 (65.52%), Postives = 189/261 (72.41%), Query Frame = 0


Query: 1   MELYIVRCSHGRNLFKVFKPFPVSLKTSISK---LHHMPIQNVGGGSVNRAYDALLLDAG 60
           M LY +RCSHG + F+  KP P+SL+TSI K     +MPIQNV GGSV+R YDALLLDAG
Sbjct: 1   MVLYSIRCSHGWSFFRAVKPTPLSLRTSIHKPRLCSNMPIQNVYGGSVHRVYDALLLDAG 60

Query: 61  GTLLQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVV 120
           GTLLQLAKPVEETYASIGSKYGL STPA+IKQGF+RAFSGPWPQKLRY+GDGRPFWKLVV
Sbjct: 61  GTLLQLAKPVEETYASIGSKYGLVSTPADIKQGFKRAFSGPWPQKLRYQGDGRPFWKLVV 120

Query: 121 SEATGCSDNSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAG------------------ 180
           SEATGC+D+SYFE+VYQYYANGDAWHLP GAY+ L VLKDAG                  
Sbjct: 121 SEATGCADDSYFEDVYQYYANGDAWHLPPGAYAALTVLKDAGVKVAVVSNFDTRLRKLLK 180

Query: 181 -------------------------------DQLGVTSDKAVHVGDDQKADKEGANAVGI 210
                                          D+LGV ++KAVHVGDDQKADKEGAN VGI
Sbjct: 181 DLNVLDMFDAVIISAEVGYEKPDGQIFEAALDELGVAANKAVHVGDDQKADKEGANGVGI 240

[Close]

BLAST of Lsi11G009840 vs. TAIR 10
Match: AT1G14310.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 273.5 bits (698), Expect = 1.5e-73
Identity = 135/253 (53.36%), Postives = 162/253 (64.03%), Query Frame = 0


Query: 6   VRCSHGRNLFKVFKPFPVSLKTSISKLHHMPIQNVGGGSVNRAYDALLLDAGGTLLQLAK 65
           +RCS G  L +  +P   SL+ S S      +    G  + RAYD LLLDAGGTLLQL+K
Sbjct: 5   LRCSRGSYLIEAMRPLSSSLRPSSS------VSFSTGKPIKRAYDGLLLDAGGTLLQLSK 64

Query: 66  PVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPWPQKLRYKGDGRPFWKLVVSEATGCSD 125
           PV ETYAS+G KYGL +TPAEIK+GF+R FS PWP+KLRY+GDGRPFWKLVVSEATGCSD
Sbjct: 65  PVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWPEKLRYQGDGRPFWKLVVSEATGCSD 124

Query: 126 NSYFEEVYQYYANGDAWHLPDGAYSTLGVLKDAG-------------------------- 185
           N YFE+VYQYYANG+AWHLP+GAY T+ +LKDAG                          
Sbjct: 125 NDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVVSNFDTRLRKLLKDLNVIDMF 184

Query: 186 -----------------------DQLGVTSDKAVHVGDDQKADKEGANAVGIACWLWGSD 210
                                  +Q+ V  ++AVHVGDD+ ADK GANA+GIACWLWG D
Sbjct: 185 DAVIVSAEVGYEKPDERIFKSALEQISVDVNRAVHVGDDEGADKGGANAIGIACWLWGED 244

[Close]

BLAST of Lsi11G009840 vs. TAIR 10
Match: AT2G41250.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.4e-30
Identity = 74/213 (34.74%), Postives = 104/213 (48.83%), Query Frame = 0


Query: 49  YDALLLDAGGTLLQLAKPVEETYASIGSKYGLTSTPAEIKQGFRRAFSGPW-PQKLRYKG 108
           + ALL+DA GTLL  A+P  + Y +IG KYG+  + AEI   +RRA+  PW    LRY  
Sbjct: 77  HKALLVDAVGTLLVPAQPTAQIYKNIGEKYGVEYSEAEILTRYRRAYQKPWGGSHLRYVN 136

Query: 109 DGRPFWKLVVSEATGCSDNSYFEEVYQYYANGDAWHLPD-GAYSTLGVLKDAGDQLGVTS 168
           D RPFW+ +V+ +TGCSD+ YFEE+Y Y+    AW L D  A      +K+AG ++ + S
Sbjct: 137 DARPFWQYIVTASTGCSDSQYFEELYSYFTTEQAWKLCDPDAGKVFKAIKEAGVKVAIVS 196

Query: 169 -------------------------------------------------DKAVHVGDDQK 211
                                                            + AVHVGDD++
Sbjct: 197 NFDTRLRPLLRALRCEDWFDAVAVSAEVEAEKPNPTIFLKACELLEVNPEDAVHVGDDRR 256

The following BLAST results are available for this feature:

BLAST of Lsi11G009840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9BSH5	4.8e-05	30.71	Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Homo sapiens...	[more]

BLAST of Lsi11G009840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3J5	4.7e-104	73.38	haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucumis melo...	[more]
A0A6J1I751	1.5e-89	65.52	haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform X1 OS=C...	[more]
A0A6J1GIH5	3.3e-89	65.52	haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform X1 OS=C...	[more]
A0A6J1DQ94	3.9e-82	67.08	haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Momordica ch...	[more]
A0A7N2L8Z5	2.7e-75	57.36	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Lsi11G009840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891067.1	4.0e-105	75.97	haloacid dehalogenase-like hydrolase domain-containing protein 3 [Benincasa hisp...	[more]
XP_008441699.1	9.8e-104	73.38	PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cuc...	[more]
XP_011649049.1	4.8e-103	74.03	haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis sativu...	[more]
XP_022973291.1	3.1e-89	65.52	haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform X1 [Cuc...	[more]
XP_022951708.1	6.8e-89	65.52	haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform X1 [Cuc...	[more]

BLAST of Lsi11G009840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14310.1	1.5e-73	53.36	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT2G41250.1	3.4e-30	34.74	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044924	HAD-superfamily hydrolase, subfamily IA, REG-2-like, capping domain superfamily	GENE3D	1.10.150.720		coord: 65..137 e-value: 1.2E-5 score: 27.1
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 158..192 e-value: 2.5E-5 score: 26.3
None	No IPR available	PANTHER	PTHR46649:SF5	F14L17.7 PROTEIN	coord: 158..210
None	No IPR available	PANTHER	PTHR46649:SF5	F14L17.7 PROTEIN	coord: 1..165
None	No IPR available	PANTHER	PTHR46649	FAMILY NOT NAMED	coord: 1..165
None	No IPR available	PANTHER	PTHR46649	FAMILY NOT NAMED	coord: 158..210
IPR036412	HAD-like superfamily	SUPERFAMILY	56784	HAD-like	coord: 49..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G009840.1	Lsi11G009840.1	mRNA