Lsi11G009170 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G009170
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ubiquitin hydrolase
Location	chr11: 12697034 .. 12698418 (-)
RNA-Seq Expression	Lsi11G009170
Synteny	Lsi11G009170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGGCAGTGTGTGAAAACTGAAACACCCAAAAAGCTTCTCTAAACTTTTTGCTTTTTTCTCTTCCCTCTGATTTGTTCATCCCTTTCTTTTTTTCTCTGCCCCCATTGCCTTAATCAGAAGCTCCAAAATCCTAAACAAATTTCTTCAAAAAGTCAAAAATCCATTGCCTTTTTCTTTTTCTTCTTCCTCATTCTCATCCTCATCACTTTCGCCTTTTTCCATTGCCTTCTTCTTCTCTCTCTCTTATGGAACTCTCTGTAAGTAATCCTTCCCCATTTCCTCTCTCCTTTTTAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTACTACTCATCTCTATATGTGTTGATTTTATTTACGTTTCTCTGTATTATATTTAAGGTCTATTCAAACAGAAACAGTGGCCAAATCCACTTGCAGCACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCCAATGACTTGCCGATCACTCAGTATTTCGAAAGCGCTCGTCAGGCCGGTTTGATCCGCTACAGTTCCTCCTCCGGTGAAAGCGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCGGAAGAAACCTCCGCCACTCGCCACCGCCGCGCGCAAGGTCTTTCTCTCTCTCTCTCTCTGAATCTCTAAATCTTTGATTGATAACCTTCCATTAGGACGACGAATTTTATCTCTCTGTTTCATTCGAGTACTAAATTTAGAGTAGATCGGAGGAATAATTTGAGAGAGAATGAGGAATTTTCCGGGAAAATGAAGCGATATTTTCTAAGAAACCAAACAGGGGAATTAATTAGAGTTATTAATTGAGTTAAATCACGAAAATTGGGTTGGTGAAAGGAATGAAACGCGAAATGAATGAATGAGGGTGTGATTTTGAATTAAAGACACGTGGCGAGATTTTGCAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAGGAAAATCATCAGATTCCACCAATAAAGAAACAGCAGCAGATGCAAGAAGGGAGGAAAGTGTTCGACGTGACGGAAACGGGAGGAGCGCGAAAATTGAAGCAAAACGACATGTCGATTCCGCGTCCTCCGCCTAGATCTAATGCTAGACCGCCCAAACCTGTCGATGAAGATCTCTACAAAATCCCACCTGAGCTTCTCCATTCTTCTAAGCGGGTATTTCCATTCCTCCTTTTCCACTATTCTCTTACCTTTTTCTTAAATTCTTCATTTCTCATTCTTCAATTGACTTAATTTATGAAAATTTTTGCTTTATCAAGTTTCTTCAAAGTCTCAGTTTCTTTTTTTTTTTTTTACCATATTTTATTATTATTTTATTACAAAAAGGATTTCACATTTTCCTCTAATTAA

mRNA sequence

GTTGGGCAGTGTGTGAAAACTGAAACACCCAAAAAGCTTCTCTAAACTTTTTGCTTTTTTCTCTTCCCTCTGATTTGTTCATCCCTTTCTTTTTTTCTCTGCCCCCATTGCCTTAATCAGAAGCTCCAAAATCCTAAACAAATTTCTTCAAAAAGTCAAAAATCCATTGCCTTTTTCTTTTTCTTCTTCCTCATTCTCATCCTCATCACTTTCGCCTTTTTCCATTGCCTTCTTCTTCTCTCTCTCTTATGGAACTCTCTGTCTATTCAAACAGAAACAGTGGCCAAATCCACTTGCAGCACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCCAATGACTTGCCGATCACTCAGTATTTCGAAAGCGCTCGTCAGGCCGGTTTGATCCGCTACAGTTCCTCCTCCGGTGAAAGCGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCGGAAGAAACCTCCGCCACTCGCCACCGCCGCGCGCAAGGACGACGAATTTTATCTCTCTGTTTCATTCGAAGTAGATCGGAGGAATAATTTGAGAGAGAATGAGGAATTTTCCGGGAAAATGAAGCGATATTTTCTAAGAAACCAAACAGGGGAATTAATTAGAACACGTGGCGAGATTTTGCAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAGGAAAATCATCAGATTCCACCAATAAAGAAACAGCAGCAGATGCAAGAAGGGAGGAAAGTGTTCGACGTGACGGAAACGGGAGGAGCGCGAAAATTGAAGCAAAACGACATGTCGATTCCGCGTCCTCCGCCTAGATCTAATGCTAGACCGCCCAAACCTGTCGATGAAGATCTCTACAAAATCCCACCTGAGCTTCTCCATTCTTCTAAGCGGGATTTCACATTTTCCTCTAATTAA

Coding sequence (CDS)

ATGGAACTCTCTGTCTATTCAAACAGAAACAGTGGCCAAATCCACTTGCAGCACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCCAATGACTTGCCGATCACTCAGTATTTCGAAAGCGCTCGTCAGGCCGGTTTGATCCGCTACAGTTCCTCCTCCGGTGAAAGCGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCGGAAGAAACCTCCGCCACTCGCCACCGCCGCGCGCAAGGACGACGAATTTTATCTCTCTGTTTCATTCGAAGTAGATCGGAGGAATAATTTGAGAGAGAATGAGGAATTTTCCGGGAAAATGAAGCGATATTTTCTAAGAAACCAAACAGGGGAATTAATTAGAACACGTGGCGAGATTTTGCAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAGGAAAATCATCAGATTCCACCAATAAAGAAACAGCAGCAGATGCAAGAAGGGAGGAAAGTGTTCGACGTGACGGAAACGGGAGGAGCGCGAAAATTGAAGCAAAACGACATGTCGATTCCGCGTCCTCCGCCTAGATCTAATGCTAGACCGCCCAAACCTGTCGATGAAGATCTCTACAAAATCCCACCTGAGCTTCTCCATTCTTCTAAGCGGGATTTCACATTTTCCTCTAATTAA

Protein sequence

MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKRDFTFSSN

Homology

[Close]

BLAST of Lsi11G009170 vs. ExPASy TrEMBL
Match: A0A5D3DXR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00480 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.4e-68
Identity = 151/223 (67.71%), Postives = 158/223 (70.85%), Query Frame = 0


Query: 1   MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPC 60
           ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQT 120
           LPPSDLYSADR KP PL T ARK                                     
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARK------------------------------------- 120

Query: 121 GELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKL 180
                       GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKL
Sbjct: 121 ------------GRVREKRYPHVGLKEHHQI-PIKKQQMMMMQQGGRVFDVTETGGARKL 173

Query: 181 KQNDM-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRDF 220
           KQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKR F
Sbjct: 181 KQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRVF 173

[Close]

BLAST of Lsi11G009170 vs. ExPASy TrEMBL
Match: A0A1S3B517 (uncharacterized protein LOC103485859 OS=Cucumis melo OX=3656 GN=LOC103485859 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 5.7e-68
Identity = 150/221 (67.87%), Postives = 157/221 (71.04%), Query Frame = 0


Query: 1   MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPC 60
           ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQT 120
           LPPSDLYSADR KP PL T ARK                                     
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARK------------------------------------- 120

Query: 121 GELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKL 180
                       GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKL
Sbjct: 121 ------------GRVREKRYPHVGLKEHHQI-PIKKQQMMMMQQGGRVFDVTETGGARKL 171

Query: 181 KQNDM-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKR 218
           KQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKR
Sbjct: 181 KQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR 171

[Close]

BLAST of Lsi11G009170 vs. ExPASy TrEMBL
Match: A0A5A7V1J3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold749G001170 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.8e-67
Identity = 150/223 (67.26%), Postives = 157/223 (70.40%), Query Frame = 0


Query: 1   MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPC 60
           ME+S+YSNRNSGQIHLQH QIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHQQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQT 120
           LPPSDLYSADR KP PL T ARK                                     
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARK------------------------------------- 120

Query: 121 GELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKL 180
                       GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKL
Sbjct: 121 ------------GRVREKRYPHVGLKEHHQI-PIKKQQMMMMQQGGRVFDVTETGGARKL 173

Query: 181 KQNDM-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRDF 220
           KQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKR F
Sbjct: 181 KQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRVF 173

[Close]

BLAST of Lsi11G009170 vs. ExPASy TrEMBL
Match: A0A0A0LKP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G082200 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 8.3e-67
Identity = 148/222 (66.67%), Postives = 156/222 (70.27%), Query Frame = 0


Query: 1   MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPC 60
           ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQT 120
            PPSDLYSADR KPPPL T  RK                                     
Sbjct: 61  PPPSDLYSADRMKPPPLPTTVRK------------------------------------- 120

Query: 121 GELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKL 180
                       GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKL
Sbjct: 121 ------------GRVREKRYPHVGLKEHHQI-PIKKQQMMMMQQGGRVFDVTETGGARKL 172

Query: 181 KQNDM-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRD 219
           KQND+ SI RPPPRSN    PKPVDEDLYKIPPELLHSSKR+
Sbjct: 181 KQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRN 172

[Close]

BLAST of Lsi11G009170 vs. ExPASy TrEMBL
Match: A0A6J1EYC5 (uncharacterized protein LOC111440009 OS=Cucurbita moschata OX=3662 GN=LOC111440009 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 9.2e-58
Identity = 136/220 (61.82%), Postives = 146/220 (66.36%), Query Frame = 0


Query: 1   MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPC 60
           ME+S +S RNSGQ+    HQIPAFGDWDKAND PITQYFESARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSHFSYRNSGQL----HQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRKKPPPL--ATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRN 120
           LPPSDLYSAD KKPPPL  ATAARK                                   
Sbjct: 61  LPPSDLYSADPKKPPPLATATAARK----------------------------------- 120

Query: 121 QTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQQMQEGRKVFDVTETGGARKL 180
                         GR+REKRYPHVGLK+ HQIP +K     Q+GR   +  E GGARKL
Sbjct: 121 --------------GRLREKRYPHVGLKD-HQIPMMK-----QQGR-ALEAMEMGGARKL 160

Query: 181 KQNDMSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKRD 219
           KQND+ IPRPPPRSNARPPKPVDEDLYKIPP LLHSSKR+
Sbjct: 181 KQNDVPIPRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRN 160

[Close]

BLAST of Lsi11G009170 vs. NCBI nr
Match: XP_038889486.1 (uncharacterized protein LOC120079394 [Benincasa hispida])

HSP 1 Score: 268.9 bits (686), Expect = 4.1e-68
Identity = 151/221 (68.33%), Postives = 159/221 (71.95%), Query Frame = 0


Query: 1   MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPC 60
           ME+SVYSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFESARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSVYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQT 120
            PPSDLYSADRKKPPPLATA RK                                     
Sbjct: 61  FPPSDLYSADRKKPPPLATAGRK------------------------------------- 120

Query: 121 GELIRTRGEILQGRVREKRYPHVGLKE--NHQIPPIKKQQQMQEGRKVFDVTETGGARKL 180
                       GRVREKR PHVGLKE  N+QIP   K+QQMQ+GR VFDVTETGGARKL
Sbjct: 121 ------------GRVREKRNPHVGLKEHNNNQIP--IKKQQMQQGR-VFDVTETGGARKL 169

Query: 181 KQNDMSIPRPPPRSN-ARPPKPVDEDLYKIPPELLHSSKRD 219
           KQND+S+P PP RSN +RPPKPVDEDLYKIPPELLHSSKR+
Sbjct: 181 KQNDVSVPHPPARSNVSRPPKPVDEDLYKIPPELLHSSKRN 169

[Close]

BLAST of Lsi11G009170 vs. NCBI nr
Match: TYK28677.1 (uncharacterized protein E5676_scaffold165G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 268.1 bits (684), Expect = 6.9e-68
Identity = 151/223 (67.71%), Postives = 158/223 (70.85%), Query Frame = 0


Query: 1   MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPC 60
           ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQT 120
           LPPSDLYSADR KP PL T ARK                                     
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARK------------------------------------- 120

Query: 121 GELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKL 180
                       GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKL
Sbjct: 121 ------------GRVREKRYPHVGLKEHHQI-PIKKQQMMMMQQGGRVFDVTETGGARKL 173

Query: 181 KQNDM-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRDF 220
           KQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKR F
Sbjct: 181 KQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRVF 173

[Close]

BLAST of Lsi11G009170 vs. NCBI nr
Match: XP_008441806.1 (PREDICTED: uncharacterized protein LOC103485859 [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-67
Identity = 150/221 (67.87%), Postives = 157/221 (71.04%), Query Frame = 0


Query: 1   MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPC 60
           ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQT 120
           LPPSDLYSADR KP PL T ARK                                     
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARK------------------------------------- 120

Query: 121 GELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKL 180
                       GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKL
Sbjct: 121 ------------GRVREKRYPHVGLKEHHQI-PIKKQQMMMMQQGGRVFDVTETGGARKL 171

Query: 181 KQNDM-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKR 218
           KQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKR
Sbjct: 181 KQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR 171

[Close]

BLAST of Lsi11G009170 vs. NCBI nr
Match: KAA0061418.1 (uncharacterized protein E6C27_scaffold749G001170 [Cucumis melo var. makuwa])

HSP 1 Score: 265.0 bits (676), Expect = 5.9e-67
Identity = 150/223 (67.26%), Postives = 157/223 (70.40%), Query Frame = 0


Query: 1   MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPC 60
           ME+S+YSNRNSGQIHLQH QIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHQQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQT 120
           LPPSDLYSADR KP PL T ARK                                     
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARK------------------------------------- 120

Query: 121 GELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKL 180
                       GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKL
Sbjct: 121 ------------GRVREKRYPHVGLKEHHQI-PIKKQQMMMMQQGGRVFDVTETGGARKL 173

Query: 181 KQNDM-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRDF 220
           KQND+ SIPRPPPRSN    PKPVDEDLYKIPPELLHSSKR F
Sbjct: 181 KQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRVF 173

[Close]

BLAST of Lsi11G009170 vs. NCBI nr
Match: XP_011649025.1 (uncharacterized protein LOC101218053 [Cucumis sativus] >KGN61322.1 hypothetical protein Csa_006309 [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 1.7e-66
Identity = 148/222 (66.67%), Postives = 156/222 (70.27%), Query Frame = 0


Query: 1   MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPC 60
           ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQT 120
            PPSDLYSADR KPPPL T  RK                                     
Sbjct: 61  PPPSDLYSADRMKPPPLPTTVRK------------------------------------- 120

Query: 121 GELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKL 180
                       GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKL
Sbjct: 121 ------------GRVREKRYPHVGLKEHHQI-PIKKQQMMMMQQGGRVFDVTETGGARKL 172

Query: 181 KQNDM-SIPRPPPRSNARP-PKPVDEDLYKIPPELLHSSKRD 219
           KQND+ SI RPPPRSN    PKPVDEDLYKIPPELLHSSKR+
Sbjct: 181 KQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRN 172

[Close]

BLAST of Lsi11G009170 vs. TAIR 10
Match: AT5G18310.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-13
Identity = 61/200 (30.50%), Postives = 89/200 (44.50%), Query Frame = 0


Query: 20  QIPAFGDWDKANDLPITQYFESARQAGLIR--YSSSSGESGPCLPPSDLYSADRKKPPPL 79
           QIP FG+W++AN++PITQYFE+ RQAGLIR  Y+++S  S      S   S+  +     
Sbjct: 15  QIPRFGEWEEANEMPITQYFENPRQAGLIRHQYTTTSSASSTTTSSSSSSSSSAEA---- 74

Query: 80  ATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVRE 139
                      L ++    R  +L    + +G                          +E
Sbjct: 75  -----------LKLASHHPRPRHLHAQRQTAG-------------------------TKE 134

Query: 140 KRYPHVGLKENHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSNARPP 199
           KR P   +++             Q  +   DV    G ++ K ND+++         +PP
Sbjct: 135 KRGPQRRVRD----------VSAQSDKYYIDV---NGVKQFK-NDVAL-------TCKPP 153

Query: 200 KPVDEDLYKIPPELLHSSKR 218
           KPVDEDLYKIPPE +HSS R
Sbjct: 195 KPVDEDLYKIPPEFIHSSTR 153

[Close]

BLAST of Lsi11G009170 vs. TAIR 10
Match: AT5G18310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-09
Identity = 53/198 (26.77%), Postives = 79/198 (39.90%), Query Frame = 0


Query: 20  QIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLAT 79
           QIP FG+W++AN++PITQYFE+ RQA  ++ +S          P  L+ A R+      T
Sbjct: 15  QIPRFGEWEEANEMPITQYFENPRQAEALKLASHHPR------PRHLH-AQRQ------T 74

Query: 80  AARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKR 139
           A  K            ++R   R   + S +  +Y++                       
Sbjct: 75  AGTK------------EKRGPQRRVRDVSAQSDKYYI----------------------- 125

Query: 140 YPHVGLKENHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSNARPPKP 199
                                          +  G ++ K ND+++         +PPKP
Sbjct: 135 -------------------------------DVNGVKQFK-NDVAL-------TCKPPKP 125

Query: 200 VDEDLYKIPPELLHSSKR 218
           VDEDLYKIPPE +HSS R
Sbjct: 195 VDEDLYKIPPEFIHSSTR 125

The following BLAST results are available for this feature:

BLAST of Lsi11G009170 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi11G009170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DXR6	3.4e-68	67.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B517	5.7e-68	67.87	uncharacterized protein LOC103485859 OS=Cucumis melo OX=3656 GN=LOC103485859 PE=...	[more]
A0A5A7V1J3	2.8e-67	67.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LKP3	8.3e-67	66.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G082200 PE=4 SV=1	[more]
A0A6J1EYC5	9.2e-58	61.82	uncharacterized protein LOC111440009 OS=Cucurbita moschata OX=3662 GN=LOC1114400...	[more]

BLAST of Lsi11G009170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889486.1	4.1e-68	68.33	uncharacterized protein LOC120079394 [Benincasa hispida]	[more]
TYK28677.1	6.9e-68	67.71	uncharacterized protein E5676_scaffold165G00480 [Cucumis melo var. makuwa]	[more]
XP_008441806.1	1.2e-67	67.87	PREDICTED: uncharacterized protein LOC103485859 [Cucumis melo]	[more]
KAA0061418.1	5.9e-67	67.26	uncharacterized protein E6C27_scaffold749G001170 [Cucumis melo var. makuwa]	[more]
XP_011649025.1	1.7e-66	66.67	uncharacterized protein LOC101218053 [Cucumis sativus] >KGN61322.1 hypothetical ...	[more]

BLAST of Lsi11G009170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18310.2	1.4e-13	30.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G18310.1	3.5e-09	26.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..213
None	No IPR available	PANTHER	PTHR33699	EXPRESSED PROTEIN	coord: 18..218
None	No IPR available	PANTHER	PTHR33699:SF3	EXPRESSED PROTEIN	coord: 18..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G009170.1	Lsi11G009170.1	mRNA