Lsi11G008700 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G008700
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Auxin efflux carrier component
Location	chr11: 11235946 .. 11246833 (+)
RNA-Seq Expression	Lsi11G008700
Synteny	Lsi11G008700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGCCGGCAAGGATGTTGTTGACATTCTCAGCGCAATTGTTCCCATGTACTTCCCGCTAACAATCGCCTACATTACTGTACGGTGGTTCAACCTCTTCACCGCCGAGCAATCCGCCGGAATCAACCGTTTCGTCAGAATCTTGGCCATTCCCTTCCTCGCCTTCAAAGTAATATCCTCCAACAACCTTCTCACCATTAATCTCAAACTCTTCGCCGCTGATTCGCTTCAGAAGCTCATCTCCCTCGCCGCTCTGTTCCTCTGGAAATTGCTCTGCAGAAACGCCTCTCTCGATTGGATGATCACTCTATTCTCTCTATCCTCTCTTCCTAATACGCTCATCATTGGTCTTCCGATGACGACGGCGATGTACGGTCAACAATCGATTAGTTTCATCATTCAGACTCTGGTTTTTCAAAATGCGATTTGGATCAATGTGTTGATTGTACTCTTCGAGTATAGAGCTGCGAGGCTAATTATCACGGCGGCAGCGGAGGAACGGAGGAGCGGTGGCGGAGAGTGTGGTATGGTGGATTTGAGTGGATTGACGCAGGTTTTTCCGGAGAAAACAGAGGTGAGTTTTGTGTCTGTTGATGGCGATGGTGAAATTGGTTCTGAAGGTAATGGTAATGGAGGTTTTCCGGCGAAAGAGATACGTCCGGCCGAAGGCGGTGGTGGTTCTGGACATTTAGGGCGGATTATGGAAGCTGAGAAGGGAAATAATCTCCGATCGGAGGATAATCCTTCTTCCAAAGGTATTACAGTTAATTCTTAAAGTGCATTTACATATTTGGCTAAATTATATAAATAAAATATTGAAATTTTGCCATTTCTTTAAATTAATATACTCGTTAAAGAAATAAAAATAATGTTCATTTTGCTTAGTGTAGCTTTAGCCTATATATTTTGTTTAAAAATGATTTCAACTAAACATTAATTTAAAAACATATATCAACTTTAACAATTTAAACTTTGAATTTTTAAAATTATGAACCAGAACAAGATTGAGGATCATCTTAAAGTTTTAAATCTCATAATGGTTAATGAAATTTTAAGAATATTTTATTCTGTTCTCTTGGCTTCCTAGTAGTATTTAAATCTTCTAATTTATATAAAAAAAAAAAAACAAAATGTAATCTTTTAGGAGCCCTTTGTTTCGCGGGCATCTTAAATTTTCATAGAGTGGGCATCTAGATTACCGTATTTGTTTTGTGGTATGCTAAGATGTCTTAGCATCTGGAGATTCCCAGACATCCTATGATGCTCAGACAAAGGTTATCTGCAGAATTTCGGAGGACACATGGGTTTTCCAGATTCTCGAGTTGTGGGCATCCTCATTTATATATATATATATAATTTTTTTGCATTATATAATTAAATGAAATATTGTCAACCATATATATCATATTTTTTTGGAAAATTTTCACATATAGAAAAAAATGTCAAACTATTTACAGAAAATAGCAAAAAAAAAACACTGATAGACATGGATAAACTTCTATCATTTCTATCACTGATATACCCTGATAGACTTCTATTAGCGTCTATCATAATTATTTAAAAATTTTGTTATTTTGTGTAAATAGTTTCTCTTATTTTTTTTATTTTTAAAAATTTTTCTATTTTTTTGTTAGGTCGTAATTCTTATTACTTTTTAATAAGATATTCAATTTTAAATATAAATTAATAATAATTTAATAAAAAATTATTAAATTATGATATATTATTTTGTTAAAAAATAACATATGAAAATAATATAAATTGTATTAATTTAAAAAGAAGTTTAAATTGATAAAAAGAAATATGTTATATAAGTTCAAATTATATCAAATTAATTGTAAATTAACAAATAGTCGTAAGGGCATTCTTGGAACATTATGTAAATTTAAGACATTCCTGAGTAGAAATCCTACAAAACAAACATCGTCATCAAAATATTCCCAAATATCTGTAAAAATATTCGTACAAAACAAACATGGTAATATAAATATGTCAACATTATTTATAATTCCAAGCATCTAAGATTCTGGTTATCTACATTTCCAATAAACAAACGGCTCCTTAATTATTTTTGGTATGTTGATTTTCAAAATATTTTTGTTTACTCTAATTTTTTTTTAAATAAAACAATTATTTTAGTTCTTGCCATATCCAGCATCTATTTGAGCCAGGTAGAGACACGAATTAGGTGGGTGGATAATATGTGATAAAGGAATAGCAATAACTAATGCTCTGTTTGACCACCATTTCATTTTTTTGTTTTTAAATTTTTGAAAATTAAGCATATTTTTTCTCAATTTTTTATATTGATTTGCTTCTTTTTTAAGTGCAAGAATTGAATTCTTAGCTAAATTTATTAAACAAAAACTATTTTTTTAGTTTTCAAACTTTGTCTTAGTTTTTGAAAACATTTGTAAAATGTAGATAACGAAGTATGAAACTTACAGATGGAAGGAGTATTTATAAGTTTAATTTTAAAAAACTAAAAAGACTTCGTTTGGTAATCATTTCATTTTTTATTTTTGGTTTTTGAAAATTAAGCCTATTTCCTTATATTTTCTTACCATGGTTTGCATCGTTCTTAAGTACAATAGTTGAATTCTTAGTCAAATTTCAAAAACAAAAACAAGTTTTTAAAAGCAACTTTTTTAGATTTTTAAAATATAGGTAAAAAGTAGATAAGAAAGCAAGACATTTAGGGGTAAGATGAGTGTTTGTAGGCTTAAGTTTCAAAAACTAAAAATAGAAAACTAAATGATTATCAATGAGGCTTAAATAGTTACCAAATGAGCATAAACTGATTGACTTTTTTTTTTTTTTTTAAGTGCATGAGCTGAAATAGACATTTTGAAAATTATTTTGAAGGCAGAAGTTGGTCATGTTTGAAAACTAAATAGTTATTTTCAAATAATAGGGGAAAATAAATCTAAAATTTTTAGACCAAAATTGGACTTAAGCTTAGTTTGAAATTGGTATAGCTTATAAAATAATTACTAGTAGCTATGCTTCATAACAAATAAGCTATGACATGAAGTAAAAATAATGTTGGTTAAATTTCAATTTTAAACCTAAAAAGGTATATTAAGGTGTTTGGTAAATTAATTCTAAACTATTGTGATGTAGCTATAATGACCAAAATAGACATTATCTCAAGTAGACATATTATTTCAATTATTTTGTATTGATATTATCATTATTTTTTAAATCGATATTTAGTATCAATTTTATTATAAGATAATTATTTAAAAATTTATAGGCTTTAAATTGAAAATAACTTCGTTTAATCTAAAATATTTGATCAAAGTTAAAAAAAAATTGTAATAAAAAATTGAATCAATTAGTTTATATTAGAGAATAAATGTGAAAAAATGGATATGGAAGGATAAATTTGGATTTTTTTTATCGTGGTCGTGAAAGTTTTCTATATTTGTAAATAATTTGATATTCTTTCTATTTATAATAATTTTCCTTTATTTTAAAGTAATTTCTTTTTTTCCTTGTGTAGGAAAAACGAGTGGAATGACAAAACTTGTATTTTGCATGTTGTGGAAGAAGATTAGAAGAAATCCCATTACTTATTCGAGTTTACTTGGCATCATTTGGTCTCTCATATCATTTAAGTATATATCCTTATTTTCCTTTTCCTTTTTTTTTCAATACTTCCAATTAATTTTGCATCATTTATTTATTTATGTCATGTTAATTCTCAAATATTTTCTGTGAATTTTGTATATTGTATTTCTGAATAATAACTTTATTAGAATACAAAAGAATTGCAGAATAAATAGACACCCTAACAAAGGAAAATAACATAAAAAGAAAATACAAGAAAGGAAAATATAATTAAGCCATAATTTTTTTTTAACACCTTTCCTCAAACTCAAGATAGTAGACTTGAGTTTGTGAAGCGCTGAGAGAAATCGATGACAGAAACTGAAAAAAACTTTTGAACCAAATCACGACATATCTAGGCTGGAAACAGAGACCACGAAAGACTTCTGAGCCGGAAACAGAGATCCACAAACTACTTTTGGGTTGGAGATAGATACCCACAAAACACTTTTGGACCTAAACACAGAGATCCACTAAGAATTTCTAGACTGAAAACAAATATCTGAAACAGAACCCAAAAATATCCGATCTGAAAACGGGATAGAGATCCACAAACGTAAATCTAAAAACAGAACAAAATCAGTGACAGAGACAGAGATGGGTGAACAGTCAGCCGTATAACGACGACAAGACTTTATGGATCTGCCTCCATCAACCGACTGTCAATGAAGGCAGAGATCGAAAAGTATAAAACCCTAAGACTTATGGCTCTGATACCATGTGAATTTTGTATATTATATTCTTGAATAATAACTTAACTAGAATATAAAGAATTGCATAATAAATAGACACCCTAACAAAAAAAAAATAGCAGAAAAAGAAAATACAAGAAAGGAAAATATAATTAAGCCATAATTTTCTTTAACAATTTCAATTAGGCTAAAATTATATAGTTTTCACTCTAACAATCATTTCAATTTTTCTAATTTAAATTCTTATTCATTCTTATTCCTAATTAAAGTCCTATTTGATATAATAATTTCGTTTGGATAATTATTTAGTTTTAGATTGTTCGTTTGTTTTCTTATAACTTATCATAGTTTTATCTTTCTTAACTAAACATTTGAATTTTTAATTAGCAAAATTTTTAGAGAAAAAAATACCAAGCATTTATAATTAAATATATACATATATATAGTTTTAAAGTTCCCCTAATTTTTTTTTATATACTCCTAAACATTTGATTATCTATTTTTGGAATTTGTGTGTTACCTCACAATTCTTTAATATGATTTTTATCTCTCTTTAAAAAGACATTTGGTCTCTTTACCAATTTTTAAAAACAAAAACTATTTTTTTTTCAAAACTTGACTTTAATTTTGAAAATAATGCTTATAGGATGCAGAGATTTAAAAAAAATCACATATAGAAATAGTATTTATAAGTTTGTTTTTTAAAAATTACTAAATGGTTATTATCAAAGCATGGTCTAAATATTAATTTTTTTTACAATAAACATGGTCTAAATCTTTAAAAATTATCATTTCATCATTTATTATCATTAAATATTAAAATAATTCAGTGTTTGTATGTATGATGCATGCATTTATAAATTATAAACATATTTTATTTTAGCAATTTTTAAGCTAATTTATAAAAATCACCCTTAATTTGTAATTTGTGTCAAAGATACCTTAACTTTTGAAAAGATAAAAAAATACCTTAAACTTTTAAAAAAAATGTTCAAAATTACCCTTATCATTAGTTTTGGACAAAAACTGTTAGAACTTTAATTTGTTTAAAAAATATCCCTGAACTTTCAGAAGTTTCAAAAATACCCTTATACTTTTTAAAAAAAAAGTTTTAAAATGCCCTTAAACTTTAAAAATATCCACATAAACATTTAGTATCTCATTACAAAAATACTTCTAAACTTTCTTAGGTTGCACTAATATTTTTAACCTAAAAAAAAAAAAAGTTAAAAATGTGCTAGCTGTTTATCTATACTTTATCATCTCCCCTCCTATTTCCTCTCTCTCCATACTTCAATTTATGACCTAACACTTCTCTATTTTTCCTTTTTTTCTCCTCTCTTCTTAAATACCCTCTTGCTCCAATATTCTTTGTCTCCCTCATCCCTTGATTCTTTTTTTGTTACTGATTTTGTTGCTTTATGTTAAGTACTTGACCTTTAATTTTTTTTATCTAAAAAGAACCTTCAATTAAGGAATATAGACTACAACAAGAAGAAAAATGTAAACATGAAACCACTAAGGGATAATAGGACTTAAATGTTCTAACAAGATTGTACGTTAATAGTAAGTTGAGTGTGCGTTAATATGTCGTTTGAGTTTAATACACAAAAAGAGAGACATGTTGAGAATGAGAGATATATTGAGATTTGGATCATAATTTTGAGGACAAATATTGTTAGTAGGAGATCGGAAAAGAAAGAAAACATATGCATTACCAAATTTGTAGTGATGAAGACTTTGATTTCTGAATTTTGTGTGAGATTTTGTGGGATTTTATGCTTTAACTTGAAGTTTTAGTTTATGTTTGGTCGCTGAGAAAATTGATATAAAATTTTGACAAACGGGAGAAAAATGAGAGTATCTATATAAAAAAAAAAAAGGTAAGATAACTTCAAAGAAATTGACTATACTAATGGTAGGGACATTATTTATTTAATTTGTTTTAAAGGTTAAAAGTATTAATGAAACTTTTGAAAGTTCAAAGATATTTCGAAAGTGAGATATTAATGGTTTTTGTCTATATACTAACTGTAAAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGTTTAGGGGTATTATTGAAACTTTTGAAAGTTCAAGAGTATTTTTGAAACAAAGTACTAACGTTTCCATCTATTACTAACTGTGACAAGGGTATTTTTGAAGATTTTTAAGTTGAAGGATATTATCGAAATATTTAAAAGTTCAAGGATATTTTTTACACGAAGTACAACGTTAAAAGATATTTTTCTATAATTTAACCTTTTTTTCTTATATATATATAAAGTTCATTAAAACTAGAGGTGAGAAATAGAACCTTCAATTTTGGAGAGAATATCATTTTGTCCGAATTTGACTTTTATTTTAGCGATTCATATAGGATCGAGATTTTATGGGATTGGGTAAGTGTTGGGGTAATTAGGTCATGTAAAGTGGTCCAATTGATCAAATTAAAATATAAGATATTTCTACCCAAATTAACAAAAATTAACAAAATATAAGATATTGTTTTAAATGACAAAACTACTGAAAATATTTTCCTAATAAATATATATCAGTGTTTATTATTATTTAGACAGCGTCCTTTTGCTATATTTAAAAATATTTTGGCTCCTTATACTATATTTAAAAACAGTCGTGTCTTTTGTCAATAAATTTTAATATTTAACAATCGTAAATATTTGATTGAAAAAAAAATCAAATATACGTAACCGTTGACATAGATTTTAACTTCTTGAGCCAATTAAAAAGAACTTAGTGAGAGGATATTGAAACTCTGATTTAAAAAGCTTAAAAAATCAAAATAGAATTTGAGTGTCCATAACATTTATGTATGATAAAATGATGAGAAAAGACTTTAATGATATTATTGGATATTCAAATCACAAAGAAATATATGTACTTAGTTCTTCTTAGAAGGAAAAACAACCTCGTTTGTTCTACGACATAGGTTTTCTTGGTAATATTCTATGGAGAAAATACTTCAAAATATTATTTTGAAAATACTTTTATTGAAGGAAAATTTTTAAAAATAGAAAAATAAGCGAAATTATTTACCTAAAATAGTAAAATTTTTAGATAGTTGTGACAGATGCTAATAGAAGTCTATCAAAGTCTATCAAAGTCTATCAATAATAGAAATTATAGAAGTCTATCACTGATAGATGCTGATAGAAGTCTATCAATGTCTATCAGTATTTTTTTTCTTTTGCTATTTTCTGTAAATAATTTGACATTTTTTCTAGCTATGAAAATTTCTTTTTATTGAATTCTTTTGTCAAAACTACGATATTGTTTCCCATATCCCTTATTTTCTTCCAAACAACCTTATTTTTTATTTATTTATTTATTTCTGAAAACATATCCATCTGAAAATTGTGCTCTATTTTTAATTTATTATTTTAAAGAATTTTCTTGAAATTAATTGTTTACAAATTTTGATATTAAAAACAAGGATTGTTTTTAAATATAGCAAAATGAGCCAAAATATTTGCAAATATAGCAAAATGTTATTGTTTATCACTGATAGACTACTATCATCTATCGATGTCTATTAGTGTGTAATAATGTCTATCGTAACATTTTACTACATTTAAAAATATTTTCAACAGTTTTGTCATTTAAAGCAATTACACTAGAAACAAAATATAAATTCAATTTTTTTTTTTCCAATTTTCAAGTACATAAATAAAGCACTTACAAAATCTACAATATATTTTAAAAAATGAAAAAAATCACAAACAATTTTAACATTTGAAACACATTTTCCTGTCTCTTTAATTTTGCATTATGCAAAACCAAGAAACACAAAATGTAAAGTAAATAAACAAAAACAAAAGCATTTTCAACCAAGCCTCTCGTTAACAAAACCCTAATTCTTTTCAAAAACAAATTCCAATCAAAGCATTGATATCTCTTATTAATTCCCTTCCATTGTTCAAAATTATAAGTTAAAAATTTGTAATAAGTAATGCATGCATGAAATGCAGATATGACGTAAAAATGCCAACATTATTGCAAAGATGTGTATTAATGTTATCAGACACAGGCCAAGCTCTCTCCATGTTTAGCTTGGGCATTTTCATGGCAGCACAACCAAACATCATCGCTTGTTCGTTGTCGGAGGCTGCCTCTGCCTTGCTCGTTCGGTTCCTCGTTAGTCCCATGCTCATAGCTGCCACTTCCAAACTCGTCAACCTTCATGGCATTGCATTACATACTGCTATCATTCAGGTTCTATTTTACTCTTTAAACTTCCATATTAATTGTTATTTCATATTAGGCCCATCTAAGTTACTGATATATTAATTGATTATAGAAAGATTTAAACAATTAACCTACTTCATCAGCGATATTTCATAAATAACCTAAACTTGAACGATATTTCATAATTAGATTTTTGCAATTTTTTTGGACAAATTTATCCTTGTAGTACCTCTCTTTCTTATTTATTTTTCATATTATTTTAATAATTAAAATATTAAAGGAAAACAAAATGAATTTAATATTAATTATTTAGAGATTTTTTTTTATATTAATCATTAATTTCGAAATATATCATCATTAATGAGTTTTTCATTTAATTTATTCTTATTTTATTCGTTAACAAATATGTTATCTATCCCTCAATTTTAGGAATATGTCATGGTGGTTATGTTCCCAAAATTATTCACATGCTATGAAACTTCTTCAACAAAGTATTAATTTTGCGATTTGCCCTAGCATTATTATTATACAATATGAGGCATATATGTGCAAAATGACTAAATATACGTGGATAGATGTGACAAAGTAAATGAAATGTATTTCTTAATAGAAATGAGACCAATATTATAATATAGGGTATATATTATATAACAACTTTAAATCTATAATTGTTCTAAATATTTTTGAAATAAACATGGTATATATTTGAAATAACGTTGTATATATTTGAAATAAACCTGGTATATATAAAAAAAACTAAATGAAAATTAAGATTTGGTACTATAATTATGTATTAAATGCAATCAATCGAAATTAAAGATCCTGAATTTTGAGTCAAAATTAAAATTTTATAAGACAAATTAGGGAAGGAATAAAATCTCATAAATTTAATGAAAATGTAAATTTCCTTTTGTGATGAGTTTTGAAAATTTTGGAAAAAAACTATTTAAGACACATAATTTCCATATTTTCTTTTCCATATTTGTGTCTTTTCAATTTTTTTTAAAAAAATAAAAACACTAGAAATTAATGGGATATTATGGACTTTTGAGCTTGATTTTTATGTAATATTGTAACATATTAGACTATTCATAAAAAAATGGTAGATTTAAGTCATTCTTGTAATTTGGCCTATTTAATTAGACTATTAGTATAGAAAACCCTTGATTATATATGAGCTGTACTCGTGTTGATAAGTAAGTTTTTGTTCTAATAGTTTAGGTGTATTAAATTTGGCATTAAATTTGAAAAAATTGTTGTCTATGATTTTTTTTTAAACAAAATTAAACAACAAAAAATTAAGCATAAGAACCAAACTCAATATTTTAACACTGTTAGATGTGAGAATACAACAATGATAAAAAGATAAACCTAAACAACTCAACATGTTAAGAAGACATATACCTTCGATCAAAAGGTCCAGAGGCAAGAAAGTGGTTGGTAATTTTTTTTTTAAAAAAAATATTTTAGATATAGCAAAAGTATATTACATTATTGATTTATGTTAATCAATGTTACATAGAAATAAAAATGTTAGACTAAAATTATATTTATAATATAATTTTATAGGTAAAGTTCAATGGATAAGACATCAATAATTATATTTTTTAAGTCAACTCAAAAGAATATATTTCTAAATAAAAAAAAAAACTAACTCAAAAGAATATATATATATATATATATATATATATATATATATATATATTCATTCTAATTTTTTTTTTTAATTATTATGTTTAGGCTGCTTTTCCTCAAGGAGTTGTTTCATTCGTATTGGCTAAGGAATACAATGTTCATCCAAACGTATTGAGTACTTCGTAA

mRNA sequence

ATGATCGCCGGCAAGGATGTTGTTGACATTCTCAGCGCAATTGTTCCCATGTACTTCCCGCTAACAATCGCCTACATTACTGTACGGTGGTTCAACCTCTTCACCGCCGAGCAATCCGCCGGAATCAACCGTTTCGTCAGAATCTTGGCCATTCCCTTCCTCGCCTTCAAAGTAATATCCTCCAACAACCTTCTCACCATTAATCTCAAACTCTTCGCCGCTGATTCGCTTCAGAAGCTCATCTCCCTCGCCGCTCTGTTCCTCTGGAAATTGCTCTGCAGAAACGCCTCTCTCGATTGGATGATCACTCTATTCTCTCTATCCTCTCTTCCTAATACGCTCATCATTGGTCTTCCGATGACGACGGCGATGTACGGTCAACAATCGATTAGTTTCATCATTCAGACTCTGGTTTTTCAAAATGCGATTTGGATCAATGTGTTGATTGTACTCTTCGAGTATAGAGCTGCGAGGCTAATTATCACGGCGGCAGCGGAGGAACGGAGGAGCGGTGGCGGAGAGTGTGGTATGGTGGATTTGAGTGGATTGACGCAGGTTTTTCCGGAGAAAACAGAGGTGAGTTTTGTGTCTGTTGATGGCGATGGTGAAATTGGTTCTGAAGGTAATGGTAATGGAGGTTTTCCGGCGAAAGAGATACGTCCGGCCGAAGGCGGTGGTGGTTCTGGACATTTAGGGCGGATTATGGAAGCTGAGAAGGGAAATAATCTCCGATCGGAGGATAATCCTTCTTCCAAAGACACAGGCCAAGCTCTCTCCATGTTTAGCTTGGGCATTTTCATGGCAGCACAACCAAACATCATCGCTTGTTCGTTGTCGGAGGCTGCCTCTGCCTTGCTCGTTCGGTTCCTCGTTAGTCCCATGCTCATAGCTGCCACTTCCAAACTCGTCAACCTTCATGGCATTGCATTACATACTGCTATCATTCAGGCTGCTTTTCCTCAAGGAGTTGTTTCATTCGTATTGGCTAAGGAATACAATGTTCATCCAAACGTATTGAGTACTTCGTAA

Coding sequence (CDS)

ATGATCGCCGGCAAGGATGTTGTTGACATTCTCAGCGCAATTGTTCCCATGTACTTCCCGCTAACAATCGCCTACATTACTGTACGGTGGTTCAACCTCTTCACCGCCGAGCAATCCGCCGGAATCAACCGTTTCGTCAGAATCTTGGCCATTCCCTTCCTCGCCTTCAAAGTAATATCCTCCAACAACCTTCTCACCATTAATCTCAAACTCTTCGCCGCTGATTCGCTTCAGAAGCTCATCTCCCTCGCCGCTCTGTTCCTCTGGAAATTGCTCTGCAGAAACGCCTCTCTCGATTGGATGATCACTCTATTCTCTCTATCCTCTCTTCCTAATACGCTCATCATTGGTCTTCCGATGACGACGGCGATGTACGGTCAACAATCGATTAGTTTCATCATTCAGACTCTGGTTTTTCAAAATGCGATTTGGATCAATGTGTTGATTGTACTCTTCGAGTATAGAGCTGCGAGGCTAATTATCACGGCGGCAGCGGAGGAACGGAGGAGCGGTGGCGGAGAGTGTGGTATGGTGGATTTGAGTGGATTGACGCAGGTTTTTCCGGAGAAAACAGAGGTGAGTTTTGTGTCTGTTGATGGCGATGGTGAAATTGGTTCTGAAGGTAATGGTAATGGAGGTTTTCCGGCGAAAGAGATACGTCCGGCCGAAGGCGGTGGTGGTTCTGGACATTTAGGGCGGATTATGGAAGCTGAGAAGGGAAATAATCTCCGATCGGAGGATAATCCTTCTTCCAAAGACACAGGCCAAGCTCTCTCCATGTTTAGCTTGGGCATTTTCATGGCAGCACAACCAAACATCATCGCTTGTTCGTTGTCGGAGGCTGCCTCTGCCTTGCTCGTTCGGTTCCTCGTTAGTCCCATGCTCATAGCTGCCACTTCCAAACTCGTCAACCTTCATGGCATTGCATTACATACTGCTATCATTCAGGCTGCTTTTCCTCAAGGAGTTGTTTCATTCGTATTGGCTAAGGAATACAATGTTCATCCAAACGTATTGAGTACTTCGTAA

Protein sequence

MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVISSNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPMTTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGECGMVDLSGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIMEAEKGNNLRSEDNPSSKDTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAATSKLVNLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS

Homology

[Close]

BLAST of Lsi11G008700 vs. ExPASy Swiss-Prot
Match: Q0IQA5 (Probable auxin efflux carrier component 1d OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1D PE=2 SV=2)

HSP 1 Score: 196.4 bits (498), Expect = 5.1e-49
Identity = 172/537 (32.03%), Postives = 235/537 (43.76%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MI   D+  +L+A+VP+Y  +T+AY +VRW+ +F+ +Q +GINRFV + A+P L+F  IS
Sbjct: 1   MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           +NN   +NL+  AAD+LQKLI LA L LW  L    SLDW+ITLFSLS+LPNTL++G+P+
Sbjct: 61  TNNPFAMNLRFLAADTLQKLIVLALLALWCRLSARGSLDWLITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMY-------GQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLII------TAA--- 180
              MY       G  S S ++Q +V Q  IW  +++ LFEYR ARL++      TAA   
Sbjct: 121 LKGMYAAAGAAAGADSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLVMEQFPDTAASIV 180

Query: 181 -----AEERRSGGGECGMVDLSGLTQV--------------------------------- 240
                ++     GG  G  +L    +V                                 
Sbjct: 181 SFRVDSDVVSLAGGGGGAAELQAEAEVGDDGKMRVTVRKSTSSRSEAACSHGTQSHSQSM 240

Query: 241 FPEKTEVS------------------------FVSVDGDGEIGSEGNGNGG--------- 300
            P  + +S                        F ++ G+G+ G E  G  G         
Sbjct: 241 QPRVSNLSGVEIYSLQSSRNPTPRGSSFNHAEFFNIVGNGKHGDEEKGAAGGGGHSPQPV 300

Query: 301 ----------------FPAKEIRPAE---------GGGGSGH-------------LGRIM 343
                            P  E   A          GGGG+ H              G   
Sbjct: 301 VGKRKDLHMFVWSSSASPVSERAAAAAAAGAVHVFGGGGADHGDAKGAQAYDEYSFGNKN 360

[Close]

BLAST of Lsi11G008700 vs. ExPASy Swiss-Prot
Match: P0C0X5 (Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1B PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 8.7e-49
Identity = 171/533 (32.08%), Postives = 234/533 (43.90%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MI   D+  +L+A+VP+Y  +T+AY +VRW+ +F+ +Q +GINRFV + A+P L+F  IS
Sbjct: 1   MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           +NN   +NL+  AAD+LQKLI LA L LW  L    SLDW+ITLFSLS+LPNTL++G+P+
Sbjct: 61  TNNPFAMNLRFLAADTLQKLIVLALLALWCRLSARGSLDWLITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQ----QSISFIIQTLVFQNAIWINVLIVLFEYRAARLII------TAA------ 180
              MY       S S ++Q +V Q  IW  +++ LFEYR ARL++      TAA      
Sbjct: 121 LKGMYAAAADVDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLVMEQFPDTAASIVSFR 180

Query: 181 --AEERRSGGGECGMVDLSGLTQV---------------------------------FPE 240
             ++     GG  G  +L    +V                                  P 
Sbjct: 181 VDSDVVSLAGGGGGAAELQAEAEVGDDGRMRVTVRKSTSSRSEAACSHGTQSHSQSMQPR 240

Query: 241 KTEVS------------------------FVSVDGDGEIGSEGNGNGG------------ 300
            + +S                        F ++ G+G+ G E  G  G            
Sbjct: 241 VSNLSGVEIYSLQSSRNPTPRGSSFNHAEFFNIVGNGKQGDEEKGAAGGGGHSPQPVVGK 300

Query: 301 -------------FPAKEIRPAE--------GGGGSGH-------------LGRIME--- 343
                         P  E   A         GGGG+ H              G   E   
Sbjct: 301 RKDLHMFVWSSSASPVSERAAAAAAGAVHVFGGGGADHGDAKGAQAYDEYSFGNKNEKDG 360

[Close]

BLAST of Lsi11G008700 vs. ExPASy Swiss-Prot
Match: Q0JJV0 (Probable auxin efflux carrier component 8 OS=Oryza sativa subsp. japonica OX=39947 GN=PIN8 PE=2 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 1.7e-44
Identity = 120/342 (35.09%), Postives = 178/342 (52.05%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           M++ KD+  +L A VP+Y  + +AY++++W+ LFT EQ +GIN+FV   +IP L+F+VIS
Sbjct: 1   MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           + +   +N+KL  +D LQK ++L         C     DW+IT FSLS+LPNTLI+G+P+
Sbjct: 61  TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGECGMVDL 180
              MYG+Q+   + Q +V Q+ IW  +L+ LFE RAA  + T  + E             
Sbjct: 121 LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSE------------T 180

Query: 181 SGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIMEAEKG 240
           +GL                                          G   H+   +     
Sbjct: 181 TGLIWALV-------------------------------------GFRWHIR--LPLIVS 240

Query: 241 NNLRSEDNPSSKDTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAATS 300
           N++R        D G  ++MFSLG+F A Q  IIAC       AL +RF + P L+  +S
Sbjct: 241 NSIR-----MLSDGGLGMAMFSLGLFTALQTKIIACGAKRMLLALAIRFFLGPALMGMSS 286

Query: 301 KLVNLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 343
             + + G+ L  AI+QAA PQG+V FV AKEYNV  ++LST+
Sbjct: 301 YAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADILSTA 286

[Close]

BLAST of Lsi11G008700 vs. ExPASy Swiss-Prot
Match: Q9LFP6 (Auxin efflux carrier component 8 OS=Arabidopsis thaliana OX=3702 GN=PIN8 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-43
Identity = 122/349 (34.96%), Postives = 193/349 (55.30%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MI+  D+  ++SA VP+Y  +T+ +++ R   LF+ EQ AGIN+FV   +IP L+F++IS
Sbjct: 1   MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAAL-----FLWKLLCRNASLDWMITLFSLSSLPNTLI 120
            NN   ++ KL  +D LQK + +  L     F      R   L W+IT  S+S LPNTLI
Sbjct: 61  ENNPFKMSPKLILSDILQKFLVVVVLAMVLRFWHPTGGRGGKLGWVITGLSISVLPNTLI 120

Query: 121 IGLPMTTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGEC 180
           +G+P+ +A+YG ++ S + Q +V Q+ IW  +L+ LFE  AAR + ++ A    +G  + 
Sbjct: 121 LGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARALPSSGASLEHTGNDQ- 180

Query: 181 GMVDLSGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIM 240
              + + +     E+ +   V++     +G+       +    I P       G +   +
Sbjct: 181 ---EEANIEDEPKEEEDEEEVAIVRTRSVGTMKILLKAWRKLIINPNTYATLIGIIWATL 240

Query: 241 EAEKGNNLRSEDNPS---SKDTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVS 300
               G NL    + S     D G  ++MFSLG+FMA+Q +IIAC    A   +L++F++ 
Sbjct: 241 HFRLGWNLPEMIDKSIHLLSDGGLGMAMFSLGLFMASQSSIIACGTKMAIITMLLKFVLG 300

Query: 301 PMLIAATSKLVNLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLST 342
           P L+ A++  + L       AI+QAA PQGVV FV AKEYN+HP ++ST
Sbjct: 301 PALMIASAYCIRLKSTLFKVAILQAALPQGVVPFVFAKEYNLHPEIIST 345

[Close]

BLAST of Lsi11G008700 vs. ExPASy Swiss-Prot
Match: Q67UL3 (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1C PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.8e-41
Identity = 165/571 (28.90%), Postives = 223/571 (39.05%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MI G D   +++A+VP+Y  + +AY +V+W+ +FT +Q +GINRFV + A+P L+F  IS
Sbjct: 1   MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           +NN  T+NL+  AAD+LQKLI LA L LW  L R  SL+W ITLFSLS+LPNTL++G+P+
Sbjct: 61  TNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGG----ECG 180
              MYG+ S S ++Q +V Q  IW  +++ +FEYR AR++IT    +          +  
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGAIASIVVDAD 180

Query: 181 MVDLSGLTQVFPEKTEV------------------------------------------- 240
           +V L G   +   + EV                                           
Sbjct: 181 VVSLDGRRDMIETEAEVKEDGKIHVTVRRSNASRSDVYSRRSMGFSSTTPRPSNLTNAEI 240

Query: 241 --------------SFVSVD-------------GD------------------------- 300
                         SF   D             GD                         
Sbjct: 241 YSLQSSRNPTPRGSSFNHTDFYSMVGRSSNFAAGDAFGVRTGATPRPSNYEEDAAAPNKA 300

Query: 301 -----------------------------GEIGSE-----------------GNG---NG 343
                                        GE G +                 GNG   N 
Sbjct: 301 GSKYGQYPAPNPAMAAPPKPKKAANGQAKGEDGKDLHMFVWSSSASPVSDVFGNGAEYND 360

[Close]

BLAST of Lsi11G008700 vs. ExPASy TrEMBL
Match: A0A6J1EV74 (Auxin efflux carrier component OS=Cucurbita moschata OX=3662 GN=LOC111436245 PE=3 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 2.3e-132
Identity = 273/402 (67.91%), Postives = 304/402 (75.62%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MIAGKDVV+IL AI+PMYFPL IAYITVRW  LFTAEQSAGINRFVR LAIPFLAFKVIS
Sbjct: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLL I+L+LFAADSLQKLISL ALFLWK+LC+NASL+WMIT+FSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITA-----AAEERRSGGGEC 180
           TTAMYGQ+S+SF+IQTL+FQNAIWINVLIVLFEYRAAR+ + A     +  + R  GGEC
Sbjct: 121 TTAMYGQESVSFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180

Query: 181 GMVDLSGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIM 240
           G+VD+SGL Q+FPEKTEV+ VSVD DGEI SEGN NGG P KEIRPA+GGGGSGH+G I+
Sbjct: 181 GLVDMSGLKQIFPEKTEVNVVSVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIL 240

Query: 241 EAEKGNNLRSEDNPSS-------------------------------------------- 300
           E EK  +L SED  SS                                            
Sbjct: 241 EPEKEVDLPSEDTSSSTERSGMTKLIAFRLGKKITRDPITYSSLIGIIWSLISFKEGIKM 300

Query: 301 -----------KDTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAATS 343
                       DTGQAL+MFSLGIFMAAQP II CS+SE A A+LVRFL+SPML AATS
Sbjct: 301 PTVLQRCVLMFADTGQALAMFSLGIFMAAQPTIIDCSMSEVAIAMLVRFLISPMLSAATS 360

[Close]

BLAST of Lsi11G008700 vs. ExPASy TrEMBL
Match: A0A6J1KEF2 (Auxin efflux carrier component OS=Cucurbita maxima OX=3661 GN=LOC111492489 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 2.1e-130
Identity = 273/402 (67.91%), Postives = 306/402 (76.12%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MIAGKDVV+IL AI+PMYFPL IAYITVRW  LFTAEQSAGINRFVR LAIPFLAF+VIS
Sbjct: 1   MIAGKDVVEILLAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFRVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLL INL+LFAADSLQKLISLAALFLWK+L +NASL+WMIT+FSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLGINLRLFAADSLQKLISLAALFLWKILFKNASLEWMITVFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITA-----AAEERRSGGGEC 180
           TTAMYGQ+SISF+IQTL+FQNAIWINVLIVLFEYR+AR+ + A     +  + R  GGEC
Sbjct: 121 TTAMYGQESISFMIQTLIFQNAIWINVLIVLFEYRSARIFVEAERLSLSVAKGRRTGGEC 180

Query: 181 GMVDLSGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIM 240
           G+VD+SGL Q+FPEKTEV+ VSVD DGEI SEGN NGG P KEIRPA+GGGGSGH+G I 
Sbjct: 181 GLVDMSGLKQIFPEKTEVNVVSVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIF 240

Query: 241 EAEKGNNLRSED-NPSS------------------------------------------- 300
           E EK  +L SED +PS+                                           
Sbjct: 241 EPEKEVDLPSEDTSPSTGRSGMAKLIAFRLGKKITRDPITYSSLIGIIWSLISFKEGIKM 300

Query: 301 -----------KDTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAATS 343
                       DTGQAL+MFSLGIFMAAQP II CS+S+ A A+LVRFL+SPML AATS
Sbjct: 301 PTVLQRCVLMFADTGQALAMFSLGIFMAAQPTIIDCSMSQVAIAMLVRFLISPMLSAATS 360

[Close]

BLAST of Lsi11G008700 vs. ExPASy TrEMBL
Match: A0A1S4DU10 (probable auxin efflux carrier component 2 OS=Cucumis melo OX=3656 GN=LOC103485950 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 1.3e-127
Identity = 269/377 (71.35%), Postives = 292/377 (77.45%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MIAGKDV+DILSAIVPMYFPLTIAY+TVRWFNLFT +QSAGI+RFVR LAIPFL F+VIS
Sbjct: 1   MIAGKDVIDILSAIVPMYFPLTIAYVTVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLL INLKLFAADSLQKLISLAALFLWKLL  NASLDWMITLFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLAINLKLFAADSLQKLISLAALFLWKLLHTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGECGMVDL 180
           TTAMYGQ S+ F+IQTLVFQNAIWINVLIVLFEYRAAR+I+ AA E+RR GGGECG+VDL
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIV-AAEEDRRGGGGECGLVDL 180

Query: 181 SGLTQVFPEKTEVSFVSVDGDGEIGSE------GNGNGGFPAKEIRPAEGGGGSGHLGRI 240
           +GL QVFPEKTEVS V VDG+GEIGSE      GNGNGGFPAKEI P +G GGS H+G I
Sbjct: 181 NGLKQVFPEKTEVSVVCVDGNGEIGSEVDGNGNGNGNGGFPAKEIVPGDGSGGSRHIGVI 240

Query: 241 MEAEKGNNLRSEDNPSSK------------------------------------------ 300
           +EAEK N+L+ ED  SS+                                          
Sbjct: 241 VEAEKENDLQLEDTFSSEGRSGMTKLVVYMVWKKIRRNPITYASLVGIIWSLVSFKYDIK 300

Query: 301 -------------DTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAAT 317
                        DTGQALSMF+LGIFMAAQPNIIACS+SEAASA+LVRFLVSPMLIAA 
Sbjct: 301 MPTVLQRCVLMLSDTGQALSMFTLGIFMAAQPNIIACSMSEAASAMLVRFLVSPMLIAAI 360

[Close]

BLAST of Lsi11G008700 vs. ExPASy TrEMBL
Match: A0A0A0LH32 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074260 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 2.0e-104
Identity = 211/254 (83.07%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MIAGKDV++ILSAIVPMYFPLTIAYITVRWFNLFT +QSAGI+RFVR LAIPFL F+VIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLLTINLKLFAADSLQKLISLAALFLWKLLC NASLDWMITLFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGECGMVDL 180
           TTAMYGQ S+ F+IQTLVFQNAIWINVLIVLFEYRAAR+I+ AA E+RR GGGECG+VDL
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIV-AAEEDRRGGGGECGLVDL 180

Query: 181 SGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIMEAEKG 240
           +GL QVFP+KTEVS   VDGDGE+GSEGNGNGGFP KEI  A+G GGS H+G I+EAEK 
Sbjct: 181 NGLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIVEAEKE 240

Query: 241 NNLRSEDNPSSKDT 255
           N+ +SED  SSK T
Sbjct: 241 ND-QSEDTFSSKVT 252

[Close]

BLAST of Lsi11G008700 vs. ExPASy TrEMBL
Match: A0A5A7U263 (Putative auxin efflux carrier component 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00290 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 3.8e-103
Identity = 210/258 (81.40%), Postives = 229/258 (88.76%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MIAGKDV+DILSAIVPMYFPLTIAY+TVRWFNLFT +QSAGI+RFVR LAIPFL F+VIS
Sbjct: 1   MIAGKDVIDILSAIVPMYFPLTIAYVTVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLL INLKLFAADSLQKLISLAALFLWKLL  NASLDWMITLFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLAINLKLFAADSLQKLISLAALFLWKLLHTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGECGMVDL 180
           TTAMYGQ S+ F+IQTLVFQNAIWINVLIVLFEYRAAR+I+ AA E+RR GGGECG+VDL
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIV-AAEEDRRGGGGECGLVDL 180

Query: 181 SGLTQVFPEKTEVSFVSVDGDGEIGSE------GNGNGGFPAKEIRPAEGGGGSGHLGRI 240
           +GL QVFPEKTEVS V VDG+GEIGSE      GNGNGGFPAKEI P +G GGS H+G I
Sbjct: 181 NGLKQVFPEKTEVSVVCVDGNGEIGSEVDGNGNGNGNGGFPAKEIVPGDGSGGSRHIGVI 240

Query: 241 MEAEKGNNLRSEDNPSSK 253
           +EAEK N+L+ ED  SS+
Sbjct: 241 VEAEKENDLQLEDTFSSE 257

[Close]

BLAST of Lsi11G008700 vs. NCBI nr
Match: XP_038889292.1 (auxin efflux carrier component 2-like [Benincasa hispida])

HSP 1 Score: 545.4 bits (1404), Expect = 3.4e-151
Identity = 304/398 (76.38%), Postives = 325/398 (81.66%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MIAGK+VVDILS IVPMYFPLTIAYITVRWFNLFTAEQSAGI+RFVRILAIPFL+FKVIS
Sbjct: 1   MIAGKEVVDILSTIVPMYFPLTIAYITVRWFNLFTAEQSAGISRFVRILAIPFLSFKVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLL INLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLAINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGECGMVDL 180
           TTAMYGQ+S+SF+IQTLVFQNAIWIN+LIVLFEYRAARLI+ AAAE+RR GGGECG VDL
Sbjct: 121 TTAMYGQESVSFMIQTLVFQNAIWINMLIVLFEYRAARLIVEAAAEDRRRGGGECGFVDL 180

Query: 181 SGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIMEAEKG 240
           SGLTQVFP+KTEVS V VDGDGEIGS+G GNGG PAKEIRPA+GGGGS HLGRIME EK 
Sbjct: 181 SGLTQVFPDKTEVSVVCVDGDGEIGSDGIGNGGLPAKEIRPADGGGGSRHLGRIMEVEKE 240

Query: 241 NNLRSEDNPSSK------------------------------------------------ 300
            +L+S+D   SK                                                
Sbjct: 241 YDLQSDDTSPSKGTRSEMTKLVVYMVWKKIRRNPITYSSLVGIIWSLISFKYDIKMPTLL 300

Query: 301 --------DTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAATSKLVN 343
                   DTGQALSMFSLGIFMAAQPNII+CS+SEAASA+LVRFL+SP+LIAA +KLVN
Sbjct: 301 QRCVLMLSDTGQALSMFSLGIFMAAQPNIISCSMSEAASAMLVRFLLSPILIAAITKLVN 360

[Close]

BLAST of Lsi11G008700 vs. NCBI nr
Match: KAE8651711.1 (hypothetical protein Csa_006143 [Cucumis sativus])

HSP 1 Score: 515.4 bits (1326), Expect = 3.8e-142
Identity = 294/398 (73.87%), Postives = 316/398 (79.40%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MIAGKDV++ILSAIVPMYFPLTIAYITVRWFNLFT +QSAGI+RFVR LAIPFL F+VIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLLTINLKLFAADSLQKLISLAALFLWKLLC NASLDWMITLFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGECGMVDL 180
           TTAMYGQ S+ F+IQTLVFQNAIWINVLIVLFEYRAAR+I+ AA E+RR GGGECG+VDL
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIV-AAEEDRRGGGGECGLVDL 180

Query: 181 SGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIMEAEKG 240
           +GL QVFP+KTEVS   VDGDGE+GSEGNGNGGFP KEI  A+G GGS H+G I+EAEK 
Sbjct: 181 NGLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIVEAEKE 240

Query: 241 NNLRSEDNPSSK------------------------------------------------ 300
           N+ +SED  SSK                                                
Sbjct: 241 ND-QSEDTFSSKGGRSGMTKLVVYMVWKKIRRNPITYSSLVGIIWSLLSFKYDIKMPTVL 300

Query: 301 --------DTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAATSKLVN 343
                   DTGQALSMF+LGIFMA QPNIIACSLSEAASA+LVRFLVSPMLIAA SKL+N
Sbjct: 301 QRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAISKLIN 360

[Close]

BLAST of Lsi11G008700 vs. NCBI nr
Match: XP_011648997.2 (probable auxin efflux carrier component 1d [Cucumis sativus])

HSP 1 Score: 515.4 bits (1326), Expect = 3.8e-142
Identity = 294/398 (73.87%), Postives = 316/398 (79.40%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MIAGKDV++ILSAIVPMYFPLTIAYITVRWFNLFT +QSAGI+RFVR LAIPFL F+VIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLLTINLKLFAADSLQKLISLAALFLWKLLC NASLDWMITLFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGECGMVDL 180
           TTAMYGQ S+ F+IQTLVFQNAIWINVLIVLFEYRAAR+I+ AA E+RR GGGECG+VDL
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIV-AAEEDRRGGGGECGLVDL 180

Query: 181 SGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIMEAEKG 240
           +GL QVFP+KTEVS   VDGDGE+GSEGNGNGGFP KEI  A+G GGS H+G I+EAEK 
Sbjct: 181 NGLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIVEAEKE 240

Query: 241 NNLRSEDNPSSK------------------------------------------------ 300
           N+ +SED  SSK                                                
Sbjct: 241 ND-QSEDTFSSKGGRSGMTKLVVYMVWKKIRRNPITYSSLVGIIWSLLSFKYDIKMPTVL 300

Query: 301 --------DTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAATSKLVN 343
                   DTGQALSMF+LGIFMA QPNIIACSLSEAASA+LVRFLVSPMLIAA SKL+N
Sbjct: 301 QRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAISKLIN 360

[Close]

BLAST of Lsi11G008700 vs. NCBI nr
Match: XP_023546740.1 (probable auxin efflux carrier component 1d [Cucurbita pepo subsp. pepo])

HSP 1 Score: 484.6 bits (1246), Expect = 7.2e-133
Identity = 273/402 (67.91%), Postives = 303/402 (75.37%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MI GKDVV+IL AI+PMYFPL IAYITVRW  LFTAEQSAGINRFVR LAIPFLAFKVIS
Sbjct: 1   MITGKDVVEILFAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLL INL+LFAADSLQKLISLAALFLWK+LC+NASL+WMIT+FSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLAINLRLFAADSLQKLISLAALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITA-----AAEERRSGGGEC 180
           TTAMYGQ+S+SF+IQTL+FQNAIWINVLIVLFEYRAAR+ + A     +  + R  GGEC
Sbjct: 121 TTAMYGQESVSFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180

Query: 181 GMVDLSGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIM 240
           G+VD+SGL Q+FPEKTE + VSVD DGEI SEGNGNGG P KEIRPAEGGGGSGH+G I+
Sbjct: 181 GLVDMSGLKQIFPEKTEANVVSVDRDGEIVSEGNGNGGSPPKEIRPAEGGGGSGHVGLIL 240

Query: 241 EAEKGNNLRSEDNPSS-------------------------------------------- 300
           E EK  +L SED  SS                                            
Sbjct: 241 EPEKEVDLPSEDTSSSAGRSGMTKLIAYRLGKKITRDPITYSSLIGIIWSLISFKEGIKM 300

Query: 301 -----------KDTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAATS 343
                       DTGQAL+MFSLGIFMAAQP II CS+SE A A+LVRFL+SPML A TS
Sbjct: 301 PTVLQRCVLTFADTGQALAMFSLGIFMAAQPTIIDCSMSEVAIAMLVRFLISPMLSATTS 360

[Close]

BLAST of Lsi11G008700 vs. NCBI nr
Match: XP_022929755.1 (auxin efflux carrier component 2-like [Cucurbita moschata])

HSP 1 Score: 481.9 bits (1239), Expect = 4.7e-132
Identity = 273/402 (67.91%), Postives = 304/402 (75.62%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MIAGKDVV+IL AI+PMYFPL IAYITVRW  LFTAEQSAGINRFVR LAIPFLAFKVIS
Sbjct: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLL I+L+LFAADSLQKLISL ALFLWK+LC+NASL+WMIT+FSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITA-----AAEERRSGGGEC 180
           TTAMYGQ+S+SF+IQTL+FQNAIWINVLIVLFEYRAAR+ + A     +  + R  GGEC
Sbjct: 121 TTAMYGQESVSFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180

Query: 181 GMVDLSGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIM 240
           G+VD+SGL Q+FPEKTEV+ VSVD DGEI SEGN NGG P KEIRPA+GGGGSGH+G I+
Sbjct: 181 GLVDMSGLKQIFPEKTEVNVVSVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIL 240

Query: 241 EAEKGNNLRSEDNPSS-------------------------------------------- 300
           E EK  +L SED  SS                                            
Sbjct: 241 EPEKEVDLPSEDTSSSTERSGMTKLIAFRLGKKITRDPITYSSLIGIIWSLISFKEGIKM 300

Query: 301 -----------KDTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAATS 343
                       DTGQAL+MFSLGIFMAAQP II CS+SE A A+LVRFL+SPML AATS
Sbjct: 301 PTVLQRCVLMFADTGQALAMFSLGIFMAAQPTIIDCSMSEVAIAMLVRFLISPMLSAATS 360

[Close]

BLAST of Lsi11G008700 vs. TAIR 10
Match: AT5G15100.1 (Auxin efflux carrier family protein )

HSP 1 Score: 178.7 bits (452), Expect = 7.9e-45
Identity = 122/349 (34.96%), Postives = 193/349 (55.30%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MI+  D+  ++SA VP+Y  +T+ +++ R   LF+ EQ AGIN+FV   +IP L+F++IS
Sbjct: 1   MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAAL-----FLWKLLCRNASLDWMITLFSLSSLPNTLI 120
            NN   ++ KL  +D LQK + +  L     F      R   L W+IT  S+S LPNTLI
Sbjct: 61  ENNPFKMSPKLILSDILQKFLVVVVLAMVLRFWHPTGGRGGKLGWVITGLSISVLPNTLI 120

Query: 121 IGLPMTTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGEC 180
           +G+P+ +A+YG ++ S + Q +V Q+ IW  +L+ LFE  AAR + ++ A    +G  + 
Sbjct: 121 LGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARALPSSGASLEHTGNDQ- 180

Query: 181 GMVDLSGLTQVFPEKTEVSFVSVDGDGEIGSEGNGNGGFPAKEIRPAEGGGGSGHLGRIM 240
              + + +     E+ +   V++     +G+       +    I P       G +   +
Sbjct: 181 ---EEANIEDEPKEEEDEEEVAIVRTRSVGTMKILLKAWRKLIINPNTYATLIGIIWATL 240

Query: 241 EAEKGNNLRSEDNPS---SKDTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVS 300
               G NL    + S     D G  ++MFSLG+FMA+Q +IIAC    A   +L++F++ 
Sbjct: 241 HFRLGWNLPEMIDKSIHLLSDGGLGMAMFSLGLFMASQSSIIACGTKMAIITMLLKFVLG 300

Query: 301 PMLIAATSKLVNLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLST 342
           P L+ A++  + L       AI+QAA PQGVV FV AKEYN+HP ++ST
Sbjct: 301 PALMIASAYCIRLKSTLFKVAILQAALPQGVVPFVFAKEYNLHPEIIST 345

[Close]

BLAST of Lsi11G008700 vs. TAIR 10
Match: AT5G57090.1 (Auxin efflux carrier family protein )

HSP 1 Score: 170.6 bits (431), Expect = 2.1e-42
Identity = 84/162 (51.85%), Postives = 122/162 (75.31%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MI GKD+ D+L+A+VP+Y  + +AY +VRW+ +FT +Q +GINRFV + A+P L+F  IS
Sbjct: 1   MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SN+   +N    AADSLQK++ LAALFLW+   R  SL+WMITLFSLS+LPNTL++G+P+
Sbjct: 61  SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIIT 163
             AMYG  S + ++Q +V Q+ IW  +++ LFE+R A+L+I+
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLIS 162

HSP 2 Score: 105.9 bits (263), Expect = 6.5e-23
Identity = 54/90 (60.00%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 253 DTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAATSKLVNLHGIALHT 312
           D G  ++MFSLG+FMA QP IIAC  S A  A+ VRFL  P +IAATS  + + G  LH 
Sbjct: 537 DAGLGMAMFSLGLFMALQPKIIACGKSVAGFAMAVRFLTGPAVIAATSIAIGIRGDLLHI 596

Query: 313 AIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 343
           AI+QAA PQG+V FV AKEYNVHP++LST+
Sbjct: 597 AIVQAALPQGIVPFVFAKEYNVHPDILSTA 626

[Close]

BLAST of Lsi11G008700 vs. TAIR 10
Match: AT1G73590.1 (Auxin efflux carrier family protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-41
Identity = 164/601 (27.29%), Postives = 225/601 (37.44%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MI   D   +++A+VP+Y  + +AY +V+W+ +FT +Q +GINRFV + A+P L+F  I+
Sbjct: 1   MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           +NN   +NL+  AADSLQK+I L+ LFLW  L RN SLDW ITLFSLS+LPNTL++G+P+
Sbjct: 61  ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIIT------------------ 180
              MYG  S   ++Q +V Q  IW  +++ LFEYR A+L+I+                  
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPDTAGSIVSIHVDSD 180

Query: 181 -------------AAAEE--------RRSGGGECGMVDL-----------SGLTQV---- 240
                        A  +E        RRS      +              S LT      
Sbjct: 181 IMSLDGRQPLETEAEIKEDGKLHVTVRRSNASRSDIYSRRSQGLSATPRPSNLTNAEIYS 240

Query: 241 -----FPEKTEVSFVSVD-----------------GDGEIGSEG---------------- 300
                 P     SF   D                 G+   GS+G                
Sbjct: 241 LQSSRNPTPRGSSFNHTDFYSMMASGGGRNSNFGPGEAVFGSKGPTPRPSNYEEDGGPAK 300

Query: 301 ----------------------------------------NGNGGFPAKEIRPA------ 343
                                                    G GG  AK   P       
Sbjct: 301 PTAAGTAAGAGRFHYQSGGSGGGGGAHYPAPNPGMFSPNTGGGGGTAAKGNAPVVGGKRQ 360

[Close]

BLAST of Lsi11G008700 vs. TAIR 10
Match: AT1G77110.1 (Auxin efflux carrier family protein )

HSP 1 Score: 165.2 bits (417), Expect = 9.0e-41
Identity = 148/548 (27.01%), Postives = 208/548 (37.96%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MI G +   ++ A+ P+YF + +AY +V+W  +FT  Q +GINRFV + A+P L+F  IS
Sbjct: 1   MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
            NN   ++     AD+L K+     L LW +  +   LDW+ITLFS+++LPNTL++G+P+
Sbjct: 61  QNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGGLDWLITLFSIATLPNTLVMGIPL 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGECGMVD- 180
             AMYG  + + ++Q +V Q  IW  +L+ LFE RAARL+I A    + +G      VD 
Sbjct: 121 LQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELRAARLLIRAEFPGQAAGSIAKIQVDD 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 DVISLDGMDPLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLCLTPRASNLSNAEIFSV 240

Query: 241 ------------LSGLTQVFPEKTEVSFVSVDGDG------------------------- 300
                        SG  Q +    E+ F + D  G                         
Sbjct: 241 NTPNNRFFHGGGGSGTLQFYNGSNEIMFCNGDLGGFGFTRPGLGASPRRLSGYASSDAYS 300

Query: 301 -----------EIGSEGNG----------------------------------NGGFPAK 342
                      E+   GNG                                  NG  P K
Sbjct: 301 LQPTPRASNFNELDVNGNGTPVWMKSPAAGRIYRQSSPKMMWESGQRHAAKDINGSVPEK 360

[Close]

BLAST of Lsi11G008700 vs. TAIR 10
Match: AT1G23080.1 (Auxin efflux carrier family protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-39
Identity = 90/214 (42.06%), Postives = 132/214 (61.68%), Query Frame = 0


Query: 1   MIAGKDVVDILSAIVPMYFPLTIAYITVRWFNLFTAEQSAGINRFVRILAIPFLAFKVIS 60
           MI   D+  +L+A++P+Y  + +AY +VRW+ +F+ +Q +GINRFV I A+P L+F  IS
Sbjct: 1   MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCRNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNN   +NL+  AAD+LQKLI L  L +W    R+ SL+W IT+FSLS+LPNTL++G+P+
Sbjct: 61  SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQQSISFIIQTLVFQNAIWINVLIVLFEYRAARLIITAAAEERRSGGGECGMVDL 180
             AMYG+ S S ++Q +V Q  IW  +L+ LFEYR A+++I     E  +          
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILIMEQFPETGA---------- 180

Query: 181 SGLTQVFPEKTEVSFVSVDG------DGEIGSEG 209
                +   K E   VS+DG      D +IG +G
Sbjct: 181 ----SIVSFKVESDVVSLDGHDFLETDAQIGDDG 200

HSP 2 Score: 95.1 bits (235), Expect = 1.1e-19
Identity = 48/89 (53.93%), Postives = 60/89 (67.42%), Query Frame = 0


Query: 253 DTGQALSMFSLGIFMAAQPNIIACSLSEAASALLVRFLVSPMLIAATSKLVNLHGIALHT 312
           D G  ++MFSLG+FMA QP +IAC  S A  A+ VRF   P ++A  +  + L G  L  
Sbjct: 509 DAGLGMAMFSLGLFMALQPKLIACGNSTATFAMAVRFFTGPAVMAVAAMAIGLRGDLLRV 568

Query: 313 AIIQAAFPQGVVSFVLAKEYNVHPNVLST 342
           AI+QAA PQG+V FV AKEYNVHP +LST
Sbjct: 569 AIVQAALPQGIVPFVFAKEYNVHPAILST 597

The following BLAST results are available for this feature:

BLAST of Lsi11G008700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0IQA5	5.1e-49	32.03	Probable auxin efflux carrier component 1d OS=Oryza sativa subsp. japonica OX=39...	[more]
P0C0X5	8.7e-49	32.08	Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica OX=39...	[more]
Q0JJV0	1.7e-44	35.09	Probable auxin efflux carrier component 8 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9LFP6	1.1e-43	34.96	Auxin efflux carrier component 8 OS=Arabidopsis thaliana OX=3702 GN=PIN8 PE=2 SV...	[more]
Q67UL3	1.8e-41	28.90	Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Lsi11G008700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EV74	2.3e-132	67.91	Auxin efflux carrier component OS=Cucurbita moschata OX=3662 GN=LOC111436245 PE=...	[more]
A0A6J1KEF2	2.1e-130	67.91	Auxin efflux carrier component OS=Cucurbita maxima OX=3661 GN=LOC111492489 PE=3 ...	[more]
A0A1S4DU10	1.3e-127	71.35	probable auxin efflux carrier component 2 OS=Cucumis melo OX=3656 GN=LOC10348595...	[more]
A0A0A0LH32	2.0e-104	83.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074260 PE=4 SV=1	[more]
A0A5A7U263	3.8e-103	81.40	Putative auxin efflux carrier component 2 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Lsi11G008700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889292.1	3.4e-151	76.38	auxin efflux carrier component 2-like [Benincasa hispida]	[more]
KAE8651711.1	3.8e-142	73.87	hypothetical protein Csa_006143 [Cucumis sativus]	[more]
XP_011648997.2	3.8e-142	73.87	probable auxin efflux carrier component 1d [Cucumis sativus]	[more]
XP_023546740.1	7.2e-133	67.91	probable auxin efflux carrier component 1d [Cucurbita pepo subsp. pepo]	[more]
XP_022929755.1	4.7e-132	67.91	auxin efflux carrier component 2-like [Cucurbita moschata]	[more]

BLAST of Lsi11G008700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15100.1	7.9e-45	34.96	Auxin efflux carrier family protein	[more]
AT5G57090.1	2.1e-42	51.85	Auxin efflux carrier family protein	[more]
AT1G73590.1	1.8e-41	27.29	Auxin efflux carrier family protein	[more]
AT1G77110.1	9.0e-41	27.01	Auxin efflux carrier family protein	[more]
AT1G23080.1	1.7e-39	42.06	Auxin efflux carrier family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004776	Membrane transport protein	PFAM	PF03547	Mem_trans	coord: 10..165 e-value: 9.3E-40 score: 136.2 coord: 253..341 e-value: 3.9E-26 score: 91.4
None	No IPR available	PANTHER	PTHR31752	AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED	coord: 253..342
None	No IPR available	PANTHER	PTHR31752	AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED	coord: 1..166
IPR033526	Auxin efflux carrier component 2	PANTHER	PTHR31752:SF4	AUXIN EFFLUX CARRIER COMPONENT 2	coord: 1..166
IPR033526	Auxin efflux carrier component 2	PANTHER	PTHR31752:SF4	AUXIN EFFLUX CARRIER COMPONENT 2	coord: 253..342

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G008700.1	Lsi11G008700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010315	auxin efflux
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0010329	auxin efflux transmembrane transporter activity