Lsi11G008390 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G008390
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	LOB domain-containing protein
Location	chr11: 10483445 .. 10484279 (+)
RNA-Seq Expression	Lsi11G008390
Synteny	Lsi11G008390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGTTGTCTAATTCCATAGTGGTTTTTCCCCTTTGTAAAGGGATTTTTAGTATATATGTTTGATTGGTTATGTTGAAATCTAATAGAGTGTTCTTACAGAGGAGGAATTGGAAGATGGCATCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAATCGGAATGTGTTTTTGCTCCGTATTTTCCGCCGGATCAGCCACAGAAATTCGCTAATGTTCATAAGGTATTCGGAGCCAGCAATGTTACAAAACTTCTGAATGAATTGCATCCTCACCAGAGAGAAGACGCCGTCAATTCGCTCGCCTATGAAGCCGATATGCGTCTTCGAGACCCTGTCTATGGCTGTGTTGGCGTAATTTCCCTGCTCCAACACCAACTCTGTAAACTCCAAATGGATCTCACCTGCGCCAAATCTGAACTCTCCAAATATCAAAACCTAGGCATCGGAAACCACGCCGCTCTGATTTCACCGCCTTCCGCCGTTTCCACCGTCGCTCATGGACAGCGGAACCACCGGCCGGCGTTCAATTTCGCTCGAGATCAACCGCATAGCCTCTACCACGATCAATTTTTCCCTCGAGATCAACAACAGCAACAGATGATGATCCGACGGAGCTTCGACGGCGGTAGCAACTATGACGGACTTTTGGCCGTCAACGTCACCGCCAGTATCGGCAACCTCAGCCACCAGTTCCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAGGGTTTCGTTTTGCTTCTTTTTTTTTTTCTCTTTTTTTCTGAAAAAAATCATAAACTGTTG

mRNA sequence

ATGATAAGGAGGAATTGGAAGATGGCATCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAATCGGAATGTGTTTTTGCTCCGTATTTTCCGCCGGATCAGCCACAGAAATTCGCTAATGTTCATAAGGTATTCGGAGCCAGCAATGTTACAAAACTTCTGAATGAATTGCATCCTCACCAGAGAGAAGACGCCGTCAATTCGCTCGCCTATGAAGCCGATATGCGTCTTCGAGACCCTGTCTATGGCTGTGTTGGCGTAATTTCCCTGCTCCAACACCAACTCTGTAAACTCCAAATGGATCTCACCTGCGCCAAATCTGAACTCTCCAAATATCAAAACCTAGGCATCGGAAACCACGCCGCTCTGATTTCACCGCCTTCCGCCGTTTCCACCGTCGCTCATGGACAGCGGAACCACCGGCCGGCGTTCAATTTCGCTCGAGATCAACCGCATAGCCTCTACCACGATCAATTTTTCCCTCGAGATCAACAACAGCAACAGATGATGATCCGACGGAGCTTCGACGGCGGTAGCAACTATGACGGACTTTTGGCCGTCAACGTCACCGCCAGTATCGGCAACCTCAGCCACCAGTTCCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAGGGTTTCGTTTTGCTTCTTTTTTTTTTTCTCTTTTTTTCTGAAAAAAATCATAAACTGTTG

Coding sequence (CDS)

ATGATAAGGAGGAATTGGAAGATGGCATCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAATCGGAATGTGTTTTTGCTCCGTATTTTCCGCCGGATCAGCCACAGAAATTCGCTAATGTTCATAAGGTATTCGGAGCCAGCAATGTTACAAAACTTCTGAATGAATTGCATCCTCACCAGAGAGAAGACGCCGTCAATTCGCTCGCCTATGAAGCCGATATGCGTCTTCGAGACCCTGTCTATGGCTGTGTTGGCGTAATTTCCCTGCTCCAACACCAACTCTGTAAACTCCAAATGGATCTCACCTGCGCCAAATCTGAACTCTCCAAATATCAAAACCTAGGCATCGGAAACCACGCCGCTCTGATTTCACCGCCTTCCGCCGTTTCCACCGTCGCTCATGGACAGCGGAACCACCGGCCGGCGTTCAATTTCGCTCGAGATCAACCGCATAGCCTCTACCACGATCAATTTTTCCCTCGAGATCAACAACAGCAACAGATGATGATCCGACGGAGCTTCGACGGCGGTAGCAACTATGACGGACTTTTGGCCGTCAACGTCACCGCCAGTATCGGCAACCTCAGCCACCAGTTCCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG

Protein sequence

MIRRNWKMASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHAALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSFDGGSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS

Homology

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BLAST of Lsi11G008390 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 8.0e-67
Identity = 146/220 (66.36%), Postives = 162/220 (73.64%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSS+NSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 128 NHAALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSFDGG 187
            H +L      ++ +A        A    RD  H   H QFFPR    +QM        G
Sbjct: 121 THQSL-----GINLLAGAADGTATA---VRDHYH---HHQFFPR----EQMFGGLDVPAG 180

Query: 188 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

[Close]

BLAST of Lsi11G008390 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.4e-49
Identity = 108/183 (59.02%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 9   ASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 68
           A   + SPCAACKFLRRKCQ +CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP Q
Sbjct: 26  AVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQ 85

Query: 69  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHA 128
           REDAVNSLAYEADMRLRDPVYGCVGVIS+LQH L +LQ DL  AK ELSKYQ     + +
Sbjct: 86  REDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASAS 145

Query: 129 ALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLY------HDQFFPRDQQQQQMMIRRSF 186
              + P A++    G      A NF  +  HS            F ++Q     M+ RS+
Sbjct: 146 TAPTGPQAMAEFI-GNAMPNGAHNFI-NIGHSAALGSLGGSASVFGQEQFGNAQMLSRSY 205

[Close]

BLAST of Lsi11G008390 vs. ExPASy Swiss-Prot
Match: A1YKY7 (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-47
Identity = 102/181 (56.35%), Postives = 122/181 (67.40%), Query Frame = 0


Query: 13  SNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDA 72
           + SPCAACKFLRRKCQ +CVFAPYFPPD PQKF  VH+VFGASNVTKL+NE+HP QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQREDA 89

Query: 73  VNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHAALIS 132
           +NSLAYEADMR+RDPVYGCVGVIS+LQH L +LQ DL  AK ELSKYQ     + +   +
Sbjct: 90  MNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPT 149

Query: 133 PPSAVSTVAHGQRNHRPAFNFARDQPHSLY------HDQFFPRDQQ--QQQMMIRRSFDG 186
            P A++        +  A NF  +  HS            F + +Q      M+ RS+DG
Sbjct: 150 GPQAMAEFIGSAMPNGAAHNFI-NLGHSAALGSLGGSTAMFGQQEQFGSNAQMLSRSYDG 209

[Close]

BLAST of Lsi11G008390 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.9e-47
Identity = 92/124 (74.19%), Postives = 101/124 (81.45%), Query Frame = 0


Query: 9   ASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 68
           A+  + SPCAACKFLRRKCQ +CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 69  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHA 128
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKYQ       A
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150

Query: 129 ALIS 133
           A  S
Sbjct: 151 ASAS 154

[Close]

BLAST of Lsi11G008390 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.9e-47
Identity = 92/124 (74.19%), Postives = 101/124 (81.45%), Query Frame = 0


Query: 9   ASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 68
           A+  + SPCAACKFLRRKCQ +CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 69  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHA 128
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKYQ       A
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150

Query: 129 ALIS 133
           A  S
Sbjct: 151 ASAS 154

[Close]

BLAST of Lsi11G008390 vs. ExPASy TrEMBL
Match: A0A0A0LML7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 7.9e-118
Identity = 209/218 (95.87%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 128 AALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSFDGGSN 187
           A LISPPS +STV HGQRNH+PAFNFARDQPHSLYHDQFFPRDQQQ QMM+RR+FDGGSN
Sbjct: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180

Query: 188 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 218

[Close]

BLAST of Lsi11G008390 vs. ExPASy TrEMBL
Match: A0A1S3B5A0 (LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117
Identity = 211/220 (95.91%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 128 AALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRD--QQQQQMMIRRSFDGG 187
           A LISPPSA+STV HGQRNH+PAFNFARDQPHSLYHDQFFPRD  QQQQQMM+RR+FDGG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQMMLRRNFDGG 180

Query: 188 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 220

[Close]

BLAST of Lsi11G008390 vs. ExPASy TrEMBL
Match: A0A5A7TVS1 (LOB domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G001440 PE=3 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.3e-117
Identity = 211/221 (95.48%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 128 AALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRD---QQQQQMMIRRSFDG 187
           A LISPPSA+STV HGQRNH+PAFNFARDQPHSLYHDQFFPRD   QQQQQMM+RR+FDG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQQMMLRRNFDG 180

Query: 188 GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 221

[Close]

BLAST of Lsi11G008390 vs. ExPASy TrEMBL
Match: A0A6J1D6T8 (LOB domain-containing protein 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018161 PE=3 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.1e-109
Identity = 202/224 (90.18%), Postives = 205/224 (91.52%), Query Frame = 0


Query: 3   RRNWKMASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLN 62
           RR  KMASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLN
Sbjct: 12  RRKLKMASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLN 71

Query: 63  ELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNL 122
           ELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNL
Sbjct: 72  ELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNL 131

Query: 123 GIGNHAALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSF 182
           GIGNHAALISPPSA    AHG R+++PAFNF RDQPHSLYHDQ FPRD QQQQMMIR  F
Sbjct: 132 GIGNHAALISPPSAAVATAHGPRSNQPAFNFVRDQPHSLYHDQIFPRD-QQQQMMIRSGF 191

Query: 183 DGGSNYD-GLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           DGGSNYD GLLAVNVT SI NL HQFQQ RAAAG DRRGTLDHS
Sbjct: 192 DGGSNYDAGLLAVNVTPSIANLGHQFQQPRAAAGVDRRGTLDHS 234

[Close]

BLAST of Lsi11G008390 vs. ExPASy TrEMBL
Match: A0A6J1D9K0 (LOB domain-containing protein 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018161 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.7e-107
Identity = 199/219 (90.87%), Postives = 202/219 (92.24%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 128 AALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSFDGGSN 187
           AALISPPSA    AHG R+++PAFNF RDQPHSLYHDQ FPRD QQQQMMIR  FDGGSN
Sbjct: 121 AALISPPSAAVATAHGPRSNQPAFNFVRDQPHSLYHDQIFPRD-QQQQMMIRSGFDGGSN 180

Query: 188 YD-GLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           YD GLLAVNVT SI NL HQFQQ RAAAG DRRGTLDHS
Sbjct: 181 YDAGLLAVNVTPSIANLGHQFQQPRAAAGVDRRGTLDHS 218

[Close]

BLAST of Lsi11G008390 vs. NCBI nr
Match: XP_038889589.1 (protein ASYMMETRIC LEAVES 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 451.4 bits (1160), Expect = 4.4e-123
Identity = 218/223 (97.76%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 3   RRNWKMASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLN 62
           RRNWKMASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLN
Sbjct: 11  RRNWKMASSSSNSPCAACKFLRRKCQLECVFAPYFPPDQPQKFANVHKVFGASNVTKLLN 70

Query: 63  ELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNL 122
           ELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNL
Sbjct: 71  ELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNL 130

Query: 123 GIGNHAALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSF 182
           GIGNHAALISPPSAVSTVAHGQRNH+PAFNFARDQPHSLYHDQFFPRDQQQQQMM+RRSF
Sbjct: 131 GIGNHAALISPPSAVSTVAHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQMMLRRSF 190

Query: 183 DGGSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           DGGSNYDGLL+VNVTASIGNLSHQFQQ+RAAAGDDRRGTLDHS
Sbjct: 191 DGGSNYDGLLSVNVTASIGNLSHQFQQSRAAAGDDRRGTLDHS 233

[Close]

BLAST of Lsi11G008390 vs. NCBI nr
Match: XP_038889590.1 (protein ASYMMETRIC LEAVES 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 439.5 bits (1129), Expect = 1.7e-119
Identity = 213/218 (97.71%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQLECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 128 AALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSFDGGSN 187
           AALISPPSAVSTVAHGQRNH+PAFNFARDQPHSLYHDQFFPRDQQQQQMM+RRSFDGGSN
Sbjct: 121 AALISPPSAVSTVAHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQMMLRRSFDGGSN 180

Query: 188 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           YDGLL+VNVTASIGNLSHQFQQ+RAAAGDDRRGTLDHS
Sbjct: 181 YDGLLSVNVTASIGNLSHQFQQSRAAAGDDRRGTLDHS 218

[Close]

BLAST of Lsi11G008390 vs. NCBI nr
Match: XP_004152887.1 (protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >XP_011648980.1 protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >KGN61226.1 hypothetical protein Csa_006748 [Cucumis sativus])

HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117
Identity = 209/218 (95.87%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 128 AALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSFDGGSN 187
           A LISPPS +STV HGQRNH+PAFNFARDQPHSLYHDQFFPRDQQQ QMM+RR+FDGGSN
Sbjct: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180

Query: 188 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 218

[Close]

BLAST of Lsi11G008390 vs. NCBI nr
Match: XP_008441920.1 (PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441921.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441922.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo])

HSP 1 Score: 431.8 bits (1109), Expect = 3.6e-117
Identity = 211/220 (95.91%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 128 AALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRD--QQQQQMMIRRSFDGG 187
           A LISPPSA+STV HGQRNH+PAFNFARDQPHSLYHDQFFPRD  QQQQQMM+RR+FDGG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQMMLRRNFDGG 180

Query: 188 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 220

[Close]

BLAST of Lsi11G008390 vs. NCBI nr
Match: KAA0047653.1 (LOB domain-containing protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 431.4 bits (1108), Expect = 4.7e-117
Identity = 211/221 (95.48%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 128 AALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRD---QQQQQMMIRRSFDG 187
           A LISPPSA+STV HGQRNH+PAFNFARDQPHSLYHDQFFPRD   QQQQQMM+RR+FDG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQQMMLRRNFDG 180

Query: 188 GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 221

[Close]

BLAST of Lsi11G008390 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 255.0 bits (650), Expect = 5.7e-68
Identity = 146/220 (66.36%), Postives = 162/220 (73.64%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSS+NSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 128 NHAALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSFDGG 187
            H +L      ++ +A        A    RD  H   H QFFPR    +QM        G
Sbjct: 121 THQSL-----GINLLAGAADGTATA---VRDHYH---HHQFFPR----EQMFGGLDVPAG 180

Query: 188 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

[Close]

BLAST of Lsi11G008390 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 255.0 bits (650), Expect = 5.7e-68
Identity = 146/220 (66.36%), Postives = 162/220 (73.64%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSS+NSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 128 NHAALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSFDGG 187
            H +L      ++ +A        A    RD  H   H QFFPR    +QM        G
Sbjct: 121 THQSL-----GINLLAGAADGTATA---VRDHYH---HHQFFPR----EQMFGGLDVPAG 180

Query: 188 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

[Close]

BLAST of Lsi11G008390 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 255.0 bits (650), Expect = 5.7e-68
Identity = 146/220 (66.36%), Postives = 162/220 (73.64%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSS+NSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 128 NHAALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSFDGG 187
            H +L      ++ +A        A    RD  H   H QFFPR    +QM        G
Sbjct: 121 THQSL-----GINLLAGAADGTATA---VRDHYH---HHQFFPR----EQMFGGLDVPAG 180

Query: 188 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

[Close]

BLAST of Lsi11G008390 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 255.0 bits (650), Expect = 5.7e-68
Identity = 146/220 (66.36%), Postives = 162/220 (73.64%), Query Frame = 0


Query: 8   MASSSSNSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 67
           MASSS+NSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 68  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 127
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 128 NHAALISPPSAVSTVAHGQRNHRPAFNFARDQPHSLYHDQFFPRDQQQQQMMIRRSFDGG 187
            H +L      ++ +A        A    RD  H   H QFFPR    +QM        G
Sbjct: 121 THQSL-----GINLLAGAADGTATA---VRDHYH---HHQFFPR----EQMFGGLDVPAG 180

Query: 188 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 226
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

[Close]

BLAST of Lsi11G008390 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.5e-44
Identity = 87/124 (70.16%), Postives = 101/124 (81.45%), Query Frame = 0


Query: 8   MASSSS--NSPCAACKFLRRKCQSECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELH 67
           MASSS+  NSPCAACKFLRRKC   C+FAPYFPP++P KFANVHK+FGASNVTKLLNEL 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 68  PHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIG 127
           PHQREDAVNSLAYEA+ R+RDPVYGCVG IS LQ Q+ +LQ +L  A ++L+ Y   G+ 
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY---GLS 120

Query: 128 NHAA 130
             AA
Sbjct: 121 TSAA 121

The following BLAST results are available for this feature:

BLAST of Lsi11G008390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04479	8.0e-67	66.36	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	3.4e-49	59.02	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A1YKY7	1.1e-47	56.35	Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1	[more]
A2WXT0	1.9e-47	74.19	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	1.9e-47	74.19	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]

BLAST of Lsi11G008390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LML7	7.9e-118	95.87	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=3 SV...	[more]
A0A1S3B5A0	1.8e-117	95.91	LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=3 SV=...	[more]
A0A5A7TVS1	2.3e-117	95.48	LOB domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6J1D6T8	5.1e-109	90.18	LOB domain-containing protein 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1D9K0	1.7e-107	90.87	LOB domain-containing protein 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Lsi11G008390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889589.1	4.4e-123	97.76	protein ASYMMETRIC LEAVES 2 isoform X1 [Benincasa hispida]	[more]
XP_038889590.1	1.7e-119	97.71	protein ASYMMETRIC LEAVES 2 isoform X2 [Benincasa hispida]	[more]
XP_004152887.1	1.6e-117	95.87	protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >XP_011648980.1 protein ASYMMETRIC...	[more]
XP_008441920.1	3.6e-117	95.91	PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441921.1 PREDIC...	[more]
KAA0047653.1	4.7e-117	95.48	LOB domain-containing protein 6 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi11G008390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65620.1	5.7e-68	66.36	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.2	5.7e-68	66.36	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.3	5.7e-68	66.36	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.4	5.7e-68	66.36	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.2	1.5e-44	70.16	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 16..113 e-value: 9.3E-43 score: 144.8
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 15..116 score: 27.030809
None	No IPR available	PANTHER	PTHR31301:SF76	LOB DOMAIN-CONTAINING PROTEIN 6-LIKE	coord: 9..190
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 9..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G008390.1	Lsi11G008390.1	mRNA