Lsi11G007640 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G007640
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	adagio protein 1
Location	chr11: 8612074 .. 8616637 (-)
RNA-Seq Expression	Lsi11G007640
Synteny	Lsi11G007640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCATCCAGCGTGGGAAAATGAAAGCAGTAAGAAGGGAAAAAAATGGTGAAAGATAAGAACAACAGAACACAAATTGAGATGCCCTTTTTTCCTCAAAATCTCAAACAACAAGAGTTAGCGTAGACCTAAAGCTCAATGAAAGCCCGATTGAAGGAAAGCAAAGTCAAGCCAAGCCAAGTCAAGCCTCGCTCGATCCTTTCCTTTCTTAGTCCTTAGCCACAGTAAAATCCACATTTCATAAAGGCCGTTCCTTTGCTTTAAGCCTTAACCACCCAGTTTCTCTTCATCCCTCAGATTTTTCTTCCATCAGAGGGCGGTGAGCGAACACGAAAGGCAAAAAAACCAAGTTTTTATTAACCCCGTCAAACCCAAAATCACTATCTTCTTCTATCTATACCAGAGCTAAGCTTTTAGCTAAATTGTCGAACCCTTTCAACCACTCGTTATCTTTTTCCCTCTGTGAACCGTCTCAACCTTCTTCAATTTCGGTTATCGAGTGTTCCCACCGTCTTAATTGGTCGTTTTTGAGCTAAAACCCTGTTTTTTGGGCTCCGATCGCCGGAATTTTTTCTGGGTTTCTTCCTAATTGGATATCTGTAAATGGGTTGAAGATAATATTTGGGTTTTGGAAGAAAGGAAAATGGAGTGGGACAGCAATTCGGATCTGAGCGGAGACGAGGAAGAGGAGGGCTTCTTACTCAACGATGGTGGGCCTCTTCCTTTTCCTGTTGAGAACTTATTTCAAACTGCGCCATGTGGGTTCGTCGTCACCGATTCTCTTGAACCTGACCATCCCATCATTTATGTCAACACCGTCTTCGAAATGGTTACTGGATATCGTGCGGAGGAAGTGCTTGGTCGCAATTGGTCAGTTAATTGTAAAGTAGTAGTATTATATTGATTCAGTGTTTTTTTTGTTCTAATTCTGGAGCTTATTTAGGGGTTGAATGCGTTTTTTTCTCTTCCTTTGGTTGGGGTGGGGTTATTTCGGTTGGTTTGAGACGGGGTGGCATTTGTTTTTGATGTGTATTGTAGTTGTGTTTTGTGGTTTCTTGGGCGGATAGGAAGTCCTTGGCCTAGTTATTCTTTAATTGATCTTCGGTTTAAATTGGTCAGTTAGCTTAATGTTGGATTGGATGAGTTGGCAAGTTTTTGGTCTGTGTTTATAGCTGATGGGCAGGTTACTGGAAGCCGTAGTGTGTTCTCTGGAAGGTATGATCGATATTCTACATCTTTGCATTTCATTTCTTGTGACAATTTAGCTTCGCTGTGAGCTTTTGTAATCAGTTGGAGTTTGAAGAATTCTACTCATACAAGTTTCCATAAAGGGTCTCTTTTCTCAACATGAGATGAATCTTCAAAGAATGGGGACAGTAGGATAGATTACATGAGTAATCTTGTGCCTGTGTAAATGAAGACTCCTTTACAAGTAGAGCAGAAGTATCATAAATAAAAAGCTTTCTGACAACAATGGATATTTTGTTCCCTAACCATGAACTGATTGACTCTGAAAGGGATTGATGAAATTAGTGCAAGTTTCTTAAGAAATCATCCTGTGCCTTAACATCCATTTGGCAATGTCTATCAAGTTGTTGCACAGAAGATGGCGAAGAATGACCTTTTTGTTCTTATATTCTATTATTCTCATTTCAGCTAAGAAATTCCATTTGGGTTTCCCCTTTTCCTGTTGACTTGACGGAGGATGATGAGTATTGGTGCTTTTCTAAATGGGTTTTCCTATATTGTAATCACTACTTTCTACCCCCAATTATATGGCCAAATTCCTAGGAACGTCAAATGGTTTGCATGGACAGTGAGAAGCCTATCTTAGAAATCTTTTGAGGCTTAAGTTTTTCTGTTCTTCTAAAATTTAGAAGATGTGAGTTGCTTTTGAGGTATTAGAAAACACCGACCACAGGATTTTGTTCTATGGCAGTATTCTTGGAATGAAGGATCAGGATTATTCTTGTAATTGCGCTTGTGCTGCAATGTGGGGGAGGTATTTTGACTGCTTTTGAGGCTGTCAAAGACGGATTCTTAGGATTCTTATGATTCCAAGATGCAAGCTTTTAGGTATTCTGGAGATCTAGTGTGTATTGTCCTCTGGAGGATGGACTGTAATCTTCATGCTTAGTTTGGGATCTTCTCTACTTGAAGTCGGTGGAAATTTTTTACCGGAAAAATACTTTGTAGAATGAAATATATAAAAAGCGGCAAAACCCCAAATATAGGCAAAGGCAAAAGAGTTGCAAAGTTTTTATGTAACTTTAATACTTGATTGTAAAATGATGAAAAATGCATGAACTGGAATCTTCAATGATTGGTTATTGAGTTTCAAGGAGTCTAGGGTTGACCAACTTGATGAATACTTCTTGGTTAGGTTCTTGGTTGAGGACAGGGAGAAGAGAATCATTCTTGGTTGAGGACAGGGAGAAGAGAATCATTCTCAAATAGAAATTTGTGGAGTTAAAGTCACAAAGAGGGAGTCTAGTTTCTACAAAAAGGAAAAAAAGTTGGTTTGACTTAGTGAGATGACTATTTAGCAGGTTTTCGTAGGTTAGGATGAAATTATGGCTTTCTTTAGCAAGCTCTACACTACAAACAGAGAGTGTTAAATGGGAAGTGGTGTGTTGGCAGCGAAGCTTCAAGAATGGAAGTATTTGGCTCAAAACACCTTTTGAAGGAGGTGACGTCTTATTAGCTTTGAAGAGTTTAGACAAAAACATTGATTAAGATGGTTTCAACTTTCAAGATGACATTTTCCACAAAATTTTGGGTTTTTTTTTTCTCAAGGATGAGGTCATGGAGGTGTGAAAGGATTTCCCGGTGAATGGTATTTTTAATTCTCCCATAAGAATACTTCATTGGCTAAGGAGAAACAAGAAGTAGAAAAAGTAAAAATTTTCGGCTGATCAACTTGGTTACTAGTGTATTCAAGATCTTTTAATTAATGAATAATTGAACTCATTCAAAAAAATAAATAAAAGAATACAAGGGCACATATTTATAAAGCCCTTGAATCCATTTTGGTATAAGTAATTCCAAGTCTAAAAGACGGACCCATCAGAATGGACGAAAAAAGGGAATTACAAGAAAACCCTTATGAGGGTTTTGGGCTAAGACGAGCATCCTTTCTTCCTCAACTAATCTTCAAGTCCTTGATCAAGGATAAAACAACCATAATGTCTCTCATTCCCCTATCGGATAACAAACGAGAAACCCCAACAATAGAGAAAGAGAGCTCTCAAAATGAGAGAGGACATTTGCCACTCGATTTCTCAGACATAGAGCATAGATGTCTATCTTCTAACCACTTATCCTATCAAGCATCCCTCTCATCACCTGTGGAACATTAAACAAATCGAGAAAGGAACGAGAGCTCATTGGAAATATTTTTTTCCAAAGATTTTTGGAAGTGCCTTTGGCCCAATTGGACATCCACTCAAAAGGGCGAGGACCATATTTGGTTGCGATAATCCTATACCATAAGGTCTTAGATTGAAGGGGAAGCATTATTTGGCGAACAAGTTCTTGTTTTGTGCCTTTAAATTCCCTAACCCTGTCCCAGGTCCTTGATTTTGCCACCACTTCCCATCATACAAGGCAAGACCTTTCCCATTGACGACCCCTTCCCACATAAAGTCCCATGTAAACTCTTCTAAAGTCTTACTAACAGAGCTAGGCAATCTAATTAGGTACAAAAAAATTGACCGAGATGCCACTCAAGATTGAACAAATAAGAGTCGCCTCTTTTTGAGAAATAACTCTTCGCTTCCACGAGGCTACTCTCTTATGAACCTTATCCATTACTGGATCCAAAAAGAACGATTTCCTAGGTTATGGCCAAGAGTAAGGTCTAAATAGGACGGAGGGAATGAACCCGCCTCTCACCCTACAAGGGCAACCCATATCCACCTTCCCAGGGTTACAATTCAAACCAAAATCTAACACTAACGATCCGTTAATCTTAAGCTCAAGCATAGCCTCGGTGATCACTAAAATGTGATTTTTCGTTGAACAAGTAGAAAAAGACACACCTTATCCTTCCCAATCTCAGAACCCTCAAGGATACGGCCATCAATCCCTAGAAATAATTATCTAAGAATGTCCACTGCAAGCAGAAAAGAAAATCATGCAGATGTATTTTGTTTGGTGGGCTTTCCACAGGCCGGACAACATGGGCATAAAGAAAACAAAGGACTTTCTGAATGATGGAGCGCTATTTTAAATGTATTTGAGAGTAAATGATTTTGAATTTGCAATAATGGAAGTTTTTAGTATCCAAGGGATTATTAATTACATTGGATCAACTGGTGTTAGTGAATCTGCTTTCCTATTTTCTCCTTTTTCCAGAGCCATTATGAGTATTGTGAAGTTGGTGTATAACATTAAGGACATTTAGAAAAATACCTGAAGCTTAAGAAGACCTCATACTTGGAATCAAGTATGACCCTTCTAAACTTCTTTGTTGTTCTTGAACTTCCAGGTTATCATATGGGTTGCCAATGACAGTTCAAGTCACGTGTTCGAATTCATAGAGTCACCAAAGAGGATGCAATGA

mRNA sequence

AAAGCATCCAGCGTGGGAAAATGAAAGCAGTAAGAAGGGAAAAAAATGGTGAAAGATAAGAACAACAGAACACAAATTGAGATGCCCTTTTTTCCTCAAAATCTCAAACAACAAGAGTTAGCGTAGACCTAAAGCTCAATGAAAGCCCGATTGAAGGAAAGCAAAGTCAAGCCAAGCCAAGTCAAGCCTCGCTCGATCCTTTCCTTTCTTAGTCCTTAGCCACAGTAAAATCCACATTTCATAAAGGCCGTTCCTTTGCTTTAAGCCTTAACCACCCAGTTTCTCTTCATCCCTCAGATTTTTCTTCCATCAGAGGGCGGTGAGCGAACACGAAAGGCAAAAAAACCAAGTTTTTATTAACCCCGTCAAACCCAAAATCACTATCTTCTTCTATCTATACCAGAGCTAAGCTTTTAGCTAAATTGTCGAACCCTTTCAACCACTCGTTATCTTTTTCCCTCTGTGAACCGTCTCAACCTTCTTCAATTTCGGTTATCGAGTGTTCCCACCGTCTTAATTGGTCGTTTTTGAGCTAAAACCCTGTTTTTTGGGCTCCGATCGCCGGAATTTTTTCTGGGTTTCTTCCTAATTGGATATCTGTAAATGGGTTGAAGATAATATTTGGGTTTTGGAAGAAAGGAAAATGGAGTGGGACAGCAATTCGGATCTGAGCGGAGACGAGGAAGAGGAGGGCTTCTTACTCAACGATGGTGGGCCTCTTCCTTTTCCTGTTGAGAACTTATTTCAAACTGCGCCATGTGGGTTCGTCGTCACCGATTCTCTTGAACCTGACCATCCCATCATTTATGTCAACACCGTCTTCGAAATGGTTACTGGATATCGTGCGGAGGAAGTGCTTGGTCGCAATTGTTGTGTTTTGTGGTTTCTTGGGCGGATAGGAAGTCCTTGGCCTAGTTATTCTTTAATTGATCTTCGGTTTAAATTGGTTACTGGAAGCCGTAGTGTGTTCTCTGGAAGGTATGATCGATATTCTACATCTTTGCATTTCATTTCTTGTGACAATTTAGCTTCGCTTATTCTTGGAATGAAGGATCAGGATTATTCTTGTAATTGCGCTTGTGCTGCAATGTGGGGGAGCGAAGCTTCAAGAATGGAAGTATTTGGCTCAAAACACCTTTTGAAGGAGGTTATCATATGGGTTGCCAATGACAGTTCAAGTCACGTGTTCGAATTCATAGAGTCACCAAAGAGGATGCAATGA

Coding sequence (CDS)

ATGGAGTGGGACAGCAATTCGGATCTGAGCGGAGACGAGGAAGAGGAGGGCTTCTTACTCAACGATGGTGGGCCTCTTCCTTTTCCTGTTGAGAACTTATTTCAAACTGCGCCATGTGGGTTCGTCGTCACCGATTCTCTTGAACCTGACCATCCCATCATTTATGTCAACACCGTCTTCGAAATGGTTACTGGATATCGTGCGGAGGAAGTGCTTGGTCGCAATTGTTGTGTTTTGTGGTTTCTTGGGCGGATAGGAAGTCCTTGGCCTAGTTATTCTTTAATTGATCTTCGGTTTAAATTGGTTACTGGAAGCCGTAGTGTGTTCTCTGGAAGGTATGATCGATATTCTACATCTTTGCATTTCATTTCTTGTGACAATTTAGCTTCGCTTATTCTTGGAATGAAGGATCAGGATTATTCTTGTAATTGCGCTTGTGCTGCAATGTGGGGGAGCGAAGCTTCAAGAATGGAAGTATTTGGCTCAAAACACCTTTTGAAGGAGGTTATCATATGGGTTGCCAATGACAGTTCAAGTCACGTGTTCGAATTCATAGAGTCACCAAAGAGGATGCAATGA

Protein sequence

MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWFLGRIGSPWPSYSLIDLRFKLVTGSRSVFSGRYDRYSTSLHFISCDNLASLILGMKDQDYSCNCACAAMWGSEASRMEVFGSKHLLKEVIIWVANDSSSHVFEFIESPKRMQ

Homology

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BLAST of Lsi11G007640 vs. ExPASy Swiss-Prot
Match: Q94BT6 (Adagio protein 1 OS=Arabidopsis thaliana OX=3702 GN=ADO1 PE=1 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.4e-27
Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 1  MEWDSNSDLSGD------EEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPII 60
          MEWDS SDLS D      ++EEG L   GGP+P+PV NL  TAPCGFVVTD++EPD PII
Sbjct: 1  MEWDSGSDLSADDASSLADDEEGGLFPGGGPIPYPVGNLLHTAPCGFVVTDAVEPDQPII 60

Query: 61 YVNTVFEMVTGYRAEEVLGRNC 77
          YVNTVFEMVTGYRAEEVLG NC
Sbjct: 61 YVNTVFEMVTGYRAEEVLGGNC 82

[Close]

BLAST of Lsi11G007640 vs. ExPASy Swiss-Prot
Match: Q8W420 (Adagio protein 2 OS=Arabidopsis thaliana OX=3702 GN=ADO2 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.8e-26
Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEE--EEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNT 60
          MEWDS+SDLSG +E  E+G+   D G +PFPV +L  TAPCGFVV+D+LEPD+PIIYVNT
Sbjct: 5  MEWDSDSDLSGGDEVAEDGWFGGDNGAIPFPVGSLPGTAPCGFVVSDALEPDNPIIYVNT 64

Query: 61 VFEMVTGYRAEEVLGRNC 77
          VFE+VTGYRAEEV+GRNC
Sbjct: 65 VFEIVTGYRAEEVIGRNC 82

[Close]

BLAST of Lsi11G007640 vs. ExPASy Swiss-Prot
Match: Q5Z8K3 (Adagio-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0694000 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.3e-16
Identity = 49/95 (51.58%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 1  MEWDSNSDLSG-----------DEEEEGFL-------LNDGGPLPFPVENLFQ-TAPCGF 60
          MEWDS SD +G           +EEEEG            GG   F +E + + + PCG 
Sbjct: 1  MEWDSESDGAGSIGAGEEEEEEEEEEEGGFGGGGGGGGGGGGMFSFAIEGMLRASGPCGL 60

Query: 61 VVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC 77
          VVTD+LEPD PIIYVN  FE  TGYRAEEVLGRNC
Sbjct: 61 VVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNC 95

[Close]

BLAST of Lsi11G007640 vs. ExPASy Swiss-Prot
Match: Q67UX0 (Putative adagio-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0150800 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-15
Identity = 47/93 (50.54%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEEEE-----------------GFLLNDGGPLPFPVENLFQTAPCGFVV 60
          MEWDS+S+ SGDEEEE                 G  +  GG     +E +     CG VV
Sbjct: 1  MEWDSDSEGSGDEEEEEEEEEEEGVEVGGGGDGGVGVGVGGGFALAIEGVL--GACGLVV 60

Query: 61 TDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC 77
          +D+LEPD PIIYVN  FE  TGYRAEEVLGRNC
Sbjct: 61 SDALEPDFPIIYVNRGFEDATGYRAEEVLGRNC 91

[Close]

BLAST of Lsi11G007640 vs. ExPASy Swiss-Prot
Match: Q9C9W9 (Adagio protein 3 OS=Arabidopsis thaliana OX=3702 GN=ADO3 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 34 FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWF 82
          +   P  F+V+D+LEPD P+IYVN VFE+ TGYRA+EVLGRNC  L +
Sbjct: 49 YPMTPPSFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRNCRFLQY 96

[Close]

BLAST of Lsi11G007640 vs. ExPASy TrEMBL
Match: A0A6J1DIU5 (adagio protein 1 OS=Momordica charantia OX=3673 GN=LOC111020875 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37
Identity = 78/83 (93.98%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVTGYRAEEVLGRNCCVLWFLG 84
          EMVTGYRAEEVLGRNC  L + G
Sbjct: 61 EMVTGYRAEEVLGRNCRFLQYRG 83

[Close]

BLAST of Lsi11G007640 vs. ExPASy TrEMBL
Match: A0A5D3BQS7 (Adagio protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00440 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.4e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVTGYRAEEVLGRNC 77
          EMVTGYRAEEVLGRNC
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]

BLAST of Lsi11G007640 vs. ExPASy TrEMBL
Match: A0A5A7UKB2 (Adagio protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00370 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.4e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVTGYRAEEVLGRNC 77
          EMVTGYRAEEVLGRNC
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]

BLAST of Lsi11G007640 vs. ExPASy TrEMBL
Match: A0A0A0LME5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059770 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.4e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVTGYRAEEVLGRNC 77
          EMVTGYRAEEVLGRNC
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]

BLAST of Lsi11G007640 vs. ExPASy TrEMBL
Match: A0A1S3BRY3 (LOW QUALITY PROTEIN: adagio protein 1 OS=Cucumis melo OX=3656 GN=LOC103492868 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.4e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVTGYRAEEVLGRNC 77
          EMVTGYRAEEVLGRNC
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]

BLAST of Lsi11G007640 vs. NCBI nr
Match: XP_022153359.1 (adagio protein 1 [Momordica charantia])

HSP 1 Score: 166.4 bits (420), Expect = 2.4e-37
Identity = 78/83 (93.98%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVTGYRAEEVLGRNCCVLWFLG 84
          EMVTGYRAEEVLGRNC  L + G
Sbjct: 61 EMVTGYRAEEVLGRNCRFLQYRG 83

[Close]

BLAST of Lsi11G007640 vs. NCBI nr
Match: XP_008451638.1 (PREDICTED: LOW QUALITY PROTEIN: adagio protein 1 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 7.1e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVTGYRAEEVLGRNC 77
          EMVTGYRAEEVLGRNC
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]

BLAST of Lsi11G007640 vs. NCBI nr
Match: KAA0055560.1 (adagio protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 164.9 bits (416), Expect = 7.1e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVTGYRAEEVLGRNC 77
          EMVTGYRAEEVLGRNC
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]

BLAST of Lsi11G007640 vs. NCBI nr
Match: TYK01358.1 (adagio protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 164.9 bits (416), Expect = 7.1e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVTGYRAEEVLGRNC 77
          EMVTGYRAEEVLGRNC
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]

BLAST of Lsi11G007640 vs. NCBI nr
Match: XP_004148329.1 (adagio protein 1 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 7.1e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVTGYRAEEVLGRNC 77
          EMVTGYRAEEVLGRNC
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]

BLAST of Lsi11G007640 vs. TAIR 10
Match: AT5G57360.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-28
Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 1  MEWDSNSDLSGD------EEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPII 60
          MEWDS SDLS D      ++EEG L   GGP+P+PV NL  TAPCGFVVTD++EPD PII
Sbjct: 1  MEWDSGSDLSADDASSLADDEEGGLFPGGGPIPYPVGNLLHTAPCGFVVTDAVEPDQPII 60

Query: 61 YVNTVFEMVTGYRAEEVLGRNC 77
          YVNTVFEMVTGYRAEEVLG NC
Sbjct: 61 YVNTVFEMVTGYRAEEVLGGNC 82

[Close]

BLAST of Lsi11G007640 vs. TAIR 10
Match: AT5G57360.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-28
Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 1  MEWDSNSDLSGD------EEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPII 60
          MEWDS SDLS D      ++EEG L   GGP+P+PV NL  TAPCGFVVTD++EPD PII
Sbjct: 1  MEWDSGSDLSADDASSLADDEEGGLFPGGGPIPYPVGNLLHTAPCGFVVTDAVEPDQPII 60

Query: 61 YVNTVFEMVTGYRAEEVLGRNC 77
          YVNTVFEMVTGYRAEEVLG NC
Sbjct: 61 YVNTVFEMVTGYRAEEVLGGNC 82

[Close]

BLAST of Lsi11G007640 vs. TAIR 10
Match: AT2G18915.2 (LOV KELCH protein 2 )

HSP 1 Score: 119.0 bits (297), Expect = 4.1e-27
Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEE--EEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNT 60
          MEWDS+SDLSG +E  E+G+   D G +PFPV +L  TAPCGFVV+D+LEPD+PIIYVNT
Sbjct: 5  MEWDSDSDLSGGDEVAEDGWFGGDNGAIPFPVGSLPGTAPCGFVVSDALEPDNPIIYVNT 64

Query: 61 VFEMVTGYRAEEVLGRNC 77
          VFE+VTGYRAEEV+GRNC
Sbjct: 65 VFEIVTGYRAEEVIGRNC 82

[Close]

BLAST of Lsi11G007640 vs. TAIR 10
Match: AT2G18915.1 (LOV KELCH protein 2 )

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-24
Identity = 53/75 (70.67%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 1  MEWDSNSDLSGDEE--EEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNT 60
          MEWDS+SDLSG +E  E+G+   D G +PFPV +L  TAPCGFVV+D+LEPD+PIIYVNT
Sbjct: 5  MEWDSDSDLSGGDEVAEDGWFGGDNGAIPFPVGSLPGTAPCGFVVSDALEPDNPIIYVNT 64

Query: 61 VFEMVTGYRAEEVLG 74
          VFE+VTGYRAEEV+G
Sbjct: 65 VFEIVTGYRAEEVIG 79

[Close]

BLAST of Lsi11G007640 vs. TAIR 10
Match: AT1G68050.1 (flavin-binding, kelch repeat, f box 1 )

HSP 1 Score: 68.2 bits (165), Expect = 8.4e-12
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 34 FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWF 82
          +   P  F+V+D+LEPD P+IYVN VFE+ TGYRA+EVLGRNC  L +
Sbjct: 49 YPMTPPSFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRNCRFLQY 96

The following BLAST results are available for this feature:

BLAST of Lsi11G007640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94BT6	2.4e-27	71.95	Adagio protein 1 OS=Arabidopsis thaliana OX=3702 GN=ADO1 PE=1 SV=2	[more]
Q8W420	5.8e-26	71.79	Adagio protein 2 OS=Arabidopsis thaliana OX=3702 GN=ADO2 PE=1 SV=1	[more]
Q5Z8K3	9.3e-16	51.58	Adagio-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0694000 P...	[more]
Q67UX0	3.6e-15	50.54	Putative adagio-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g...	[more]
Q9C9W9	1.2e-10	60.42	Adagio protein 3 OS=Arabidopsis thaliana OX=3702 GN=ADO3 PE=1 SV=1	[more]

BLAST of Lsi11G007640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DIU5	1.2e-37	93.98	adagio protein 1 OS=Momordica charantia OX=3673 GN=LOC111020875 PE=3 SV=1	[more]
A0A5D3BQS7	3.4e-37	100.00	Adagio protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G0044...	[more]
A0A5A7UKB2	3.4e-37	100.00	Adagio protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G003...	[more]
A0A0A0LME5	3.4e-37	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059770 PE=3 SV=1	[more]
A0A1S3BRY3	3.4e-37	100.00	LOW QUALITY PROTEIN: adagio protein 1 OS=Cucumis melo OX=3656 GN=LOC103492868 PE...	[more]

BLAST of Lsi11G007640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153359.1	2.4e-37	93.98	adagio protein 1 [Momordica charantia]	[more]
XP_008451638.1	7.1e-37	100.00	PREDICTED: LOW QUALITY PROTEIN: adagio protein 1 [Cucumis melo]	[more]
KAA0055560.1	7.1e-37	100.00	adagio protein 1 [Cucumis melo var. makuwa]	[more]
TYK01358.1	7.1e-37	100.00	adagio protein 1 [Cucumis melo var. makuwa]	[more]
XP_004148329.1	7.1e-37	100.00	adagio protein 1 [Cucumis sativus]	[more]

BLAST of Lsi11G007640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57360.1	1.7e-28	71.95	Galactose oxidase/kelch repeat superfamily protein	[more]
AT5G57360.2	1.7e-28	71.95	Galactose oxidase/kelch repeat superfamily protein	[more]
AT2G18915.2	4.1e-27	71.79	LOV KELCH protein 2	[more]
AT2G18915.1	1.1e-24	70.67	LOV KELCH protein 2	[more]
AT1G68050.1	8.4e-12	60.42	flavin-binding, kelch repeat, f box 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000014	PAS domain	TIGRFAM	TIGR00229	TIGR00229	coord: 32..76 e-value: 4.6E-6 score: 24.7
IPR000014	PAS domain	PROSITE	PS50112	PAS	coord: 30..75 score: 10.103415
IPR000014	PAS domain	CDD	cd00130	PAS	coord: 37..75 e-value: 0.00316758 score: 33.7608
IPR013767	PAS fold	PFAM	PF00989	PAS	coord: 31..75 e-value: 3.9E-5 score: 23.6
None	No IPR available	GENE3D	3.30.450.20	PAS domain	coord: 23..87 e-value: 5.4E-18 score: 66.9
None	No IPR available	PANTHER	PTHR46175	BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR	coord: 1..81
None	No IPR available	PANTHER	PTHR46175:SF7	ADAGIO PROTEIN 1-LIKE	coord: 1..81
IPR035965	PAS domain superfamily	SUPERFAMILY	55785	PYP-like sensor domain (PAS domain)	coord: 32..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G007640.1	Lsi11G007640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009785	blue light signaling pathway
biological_process	GO:0043153	entrainment of circadian clock by photoperiod
biological_process	GO:0009908	flower development
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010114	response to red light
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0009882	blue light photoreceptor activity