Lsi11G007610 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G007610
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	40S ribosomal protein S8
Location	chr11: 8587314 .. 8590442 (+)
RNA-Seq Expression	Lsi11G007610
Synteny	Lsi11G007610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAATTAAACCTAACCCTCGCCGCATCAAAACCCCTCTCAGTTCCCTTTCAATCTCTCTCCCGACTTCCCTCGATCGTTCAAGGTTCGTTCCCGATTGAATGTGTCTTGTTCTTTTCAAGATTTTTTGGGTTTTTACCATTGTGGCAGTCTTGATTGAATGTTTGTTTGTTTTATTTTGCTTAGTCCTTCTCACAGTTCCATACTTTTGTATGAATGTTAAATATTGAATTGTAGGTAGTAATGGGTGTTCTCTTTCTGCTCATGGCGATTTCATGGATATTGTCGCAGTTTGATTTATTACTGATATACATTTGCGATTATTTGGTGGTTCTGGTTAATGGCTGTTCCAATTCTTCATTTTTTTTCTTATATTCTGGATATCCTCTTTGTAATTCTTCACTTTTTGGTTATTGAGTATCAGCTTTTAGACTGTAGTTTTAGCTCTATCAATTTTCCAGCGATCTGGTTAACTTATTGTAAGCTCATGTTCGAACGGGTCCGAGGTAACTTGTGATGTTGATGGTTGGGCTTTATGAATTGTAAGAACTTCTGATATTTTGTAATAGTTATCAGTACTTTGTGATGTTTGTGATATTTGGAACTTTAAGAAAATTTGGTTTGAAAATACTATTCTTCTTATTTGTTTTTCGAAACAAATATTTTAATTTTCAACAAACGGTTGGGTTTGCCATTGGTTTGTTATAATAATTTTGGTCATGGTTCATATACCCATATAAAATTAACCCTTGTTCAGCCTTGATTATTTACTGCATCGTAGTAAAACAAAGATTATAAAAGAAAATGATGGGATCTGTAGGAAATCTACTTTTGTTCTCAAATCTGAACTCGTCTCATTTAGGTTTTCCCCAGTTTTAGAGTTTGAGGGCTGTTTGGTATTTTTTTTTCAGGTACTGTAGACTCGTCTTCACGCCAAGAGCTCTTGTCTCACCAAGATGGGTATGCCAGATAGAATTTGCAGATTGTTAACACATCTGAATTCTGTACGTGTTTTCTTTTTGTTAATCTGAGAGAACCTTCTTTTATAGGTATTTCCCGTGATTCTATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGCTTGGAGAAAGAAGCGAAAGTAACTACCTCTTCTTATATTTCGCCGAGTGTATTTTGAACAATCGGTTTTTATTTCCATTTCCTCACATTATAACTGCTAATAGTTCCACGGAAAGTTTGTAATTTCTTTCTTTGCCATTTCAGTATGATTCTGTAATTATGTAGGTTAGGGTGATTTTTTTTTGGAAAAGTGTTGTAGTTGGTGACAAGGATTTGTCATTTGTTTTCTTCTCCATTATAGTTTTCAGTGGATTTAATTAATATGCATTAGCTGATCTTCTCTTTTTGGTTGTTTATGTATTATTAATCTACATTAGCTCTCTGATTTTCTCTGATAGATTGTTGTTTATCTTTCAGTGGATTTAATTAATATGTATTAGCTATCTGTTCTTCTCTTTTCGGTTGTTTATGCTTTATTAATCTACATTAGCTCTCTAATTCTCTCTGATAGATTGTTGTTTATTGTTCTTTAACTATCACGGATGATTCTTTTTTTTGTCAATTCAAGATAGAACTTTCAACTGCTAATATGTTTTTAAAGTCCTCATGATATTGTTTCTTTCCTCTTTGTTTGTGAAGGTATGAGCTTGGAAGGCAACCTGCCAACACCAAGTTATCCAGTGACAAGTCAATCAGGAGGATTCGAGTTCGTGGTGGTAATGTGAAGTGGCGCGCTTTTAGGCTGGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGACCCGTATTCTTGATGTGGTCTACAATGCATCAAACAATGAGCTTGTTCGTACTCAAACCTTGGTGAAAAGTGCCATAGTTCAAGTTGATGCGGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAGACCACAGCCTCTGCTAAGAAGGAAGAGGTAGAGGAAGATTTATAGATTAAATGATTGATTTGGTTTATACAATTTTCAGTACAAGTTTTTGTGTAATTAATCAAGTTTCTTATGAGAAGTTAGTGCATTCGTAATCATTACAGATAGTATAATGGGACACCACTTGATTCATATCACAACTTGATTTTTATGGTTGATAGGAAGGTGATGCTGTCACTGAGGAGGTAAAGAAGAGTAACCATGTCCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTCGATCCGCATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGGCCTGGTCAATGTGGCCGAGCAGATGGGTAAGCATTGCAAAGCTCTTAATGATTCTATATTCTATTTCTGTCATGTTCTTTCTTACTTGGTTGAGCACAATCATTGAGGTGCGGAAGGTTATCTGGGTAATGTTGCCTGAGGTTTGCAATTTTTGACAGGTATATATTGGAGGGCAAAGAGCTTGAATTCTATATGAAGAAGCTCCAAAGAAAGAAGGGAAAAGGAGCTGGTGCTGCATAAATTTTGTTATCAAAATGTTTTCGGCCATTGTTTCTTGTTCGCTTTTCTTCTTATGAAGACGACGAGCTGTCGCAGTTATTTTGGAACTTCGATTTTGCTGGTAATAGTTGTTTAATTATAGTACTTTTGACCTTTTTGTGAGAACAACAGTTGGTTTATTAGCTTGAGTTCAAGTTCGATTTTTTCTTAGTTTATTTATGTAAGCGGGGTTGGTTTGGTGTTTAATACCTTAACATTTTTGTTACGCCCCCGAAAGTCCAAAATTTCCGATTCTTCTTCATCTACACTCAAATTCCTTAGTAGCTTTGATTTGTTGGAAAAAAGGGATTAAATTATGGTATTTTTAGTACGTTTAAATTAGATCAAATATTATTAGGTTTCAATTGTACATTGATCTCTGACCTTGGGCTTGGATGGTCATTGTTTGTTAAAATGACGAAGGGAAATTCACAGTCGATTTTCGAAACATTTTAAAATGGTATTAAAGGGTAGTATTTGTAAGATGTAGAATCATGGATTATGTTGGTAATGAATATATGTTGAGACGTTTGTTGTTTAT

mRNA sequence

AACAAATTAAACCTAACCCTCGCCGCATCAAAACCCCTCTCAGTTCCCTTTCAATCTCTCTCCCGACTTCCCTCGATCGTTCAAGGTACTGTAGACTCGTCTTCACGCCAAGAGCTCTTGTCTCACCAAGATGGGTATTTCCCGTGATTCTATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGCTTGGAGAAAGAAGCGAAAGTATGAGCTTGGAAGGCAACCTGCCAACACCAAGTTATCCAGTGACAAGTCAATCAGGAGGATTCGAGTTCGTGGTGGTAATGTGAAGTGGCGCGCTTTTAGGCTGGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGACCCGTATTCTTGATGTGGTCTACAATGCATCAAACAATGAGCTTGTTCGTACTCAAACCTTGGTGAAAAGTGCCATAGTTCAAGTTGATGCGGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAGACCACAGCCTCTGCTAAGAAGGAAGAGGAAGGTGATGCTGTCACTGAGGAGGTAAAGAAGAGTAACCATGTCCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTCGATCCGCATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGGCCTGGTCAATGTGGCCGAGCAGATGGGTATATATTGGAGGGCAAAGAGCTTGAATTCTATATGAAGAAGCTCCAAAGAAAGAAGGGAAAAGGAGCTGGTGCTGCATAAATTTTGTTATCAAAATGTTTTCGGCCATTGTTTCTTGTTCGCTTTTCTTCTTATGAAGACGACGAGCTGTCGCAGTTATTTTGGAACTTCGATTTTGCTGGTAATAGTTGTTTAATTATAGTACTTTTGACCTTTTTGTGAGAACAACAGTTGGTTTATTAGCTTGAGTTCAAGTTCGATTTTTTCTTAGTTTATTTATGTAAGCGGGGTTGGTTTGGTGTTTAATACCTTAACATTTTTGTTACGCCCCCGAAAGTCCAAAATTTCCGATTCTTCTTCATCTACACTCAAATTCCTTAGTAGCTTTGATTTGTTGGAAAAAAGGGATTAAATTATGGTATTTTTAGTACGTTTAAATTAGATCAAATATTATTAGGTTTCAATTGTACATTGATCTCTGACCTTGGGCTTGGATGGTCATTGTTTGTTAAAATGACGAAGGGAAATTCACAGTCGATTTTCGAAACATTTTAAAATGGTATTAAAGGGTAGTATTTGTAAGATGTAGAATCATGGATTATGTTGGTAATGAATATATGTTGAGACGTTTGTTGTTTAT

Coding sequence (CDS)

ATGGGTATTTCCCGTGATTCTATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGCTTGGAGAAAGAAGCGAAAGTATGAGCTTGGAAGGCAACCTGCCAACACCAAGTTATCCAGTGACAAGTCAATCAGGAGGATTCGAGTTCGTGGTGGTAATGTGAAGTGGCGCGCTTTTAGGCTGGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGACCCGTATTCTTGATGTGGTCTACAATGCATCAAACAATGAGCTTGTTCGTACTCAAACCTTGGTGAAAAGTGCCATAGTTCAAGTTGATGCGGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAGACCACAGCCTCTGCTAAGAAGGAAGAGGAAGGTGATGCTGTCACTGAGGAGGTAAAGAAGAGTAACCATGTCCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTCGATCCGCATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGGCCTGGTCAATGTGGCCGAGCAGATGGGTATATATTGGAGGGCAAAGAGCTTGAATTCTATATGAAGAAGCTCCAAAGAAAGAAGGGAAAAGGAGCTGGTGCTGCATAA

Protein sequence

MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTTASAKKEEEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA

Homology

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BLAST of Lsi11G007610 vs. ExPASy Swiss-Prot
Match: P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 376.3 bits (965), Expect = 2.3e-103
Identity = 195/221 (88.24%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTTASAKKEEEG---DAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKK  A AKK+ EG   +A TEE KKSNHV RK+EKRQQ R LD HIEEQF SGRL
Sbjct: 121 DIGRKKKAPA-AKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

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BLAST of Lsi11G007610 vs. ExPASy Swiss-Prot
Match: O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 3.9e-103
Identity = 194/221 (87.78%), Postives = 207/221 (93.67%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASAKKE--EEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLM 180
           +IGRKKK TA+AKK+  EEG+A TEE KKSNHV  K+EKRQQ R LD HIEEQF  G+L+
Sbjct: 121 EIGRKKK-TAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ACISSRPGQCG+ADG ILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

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BLAST of Lsi11G007610 vs. ExPASy Swiss-Prot
Match: Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 373.6 bits (958), Expect = 1.5e-102
Identity = 191/221 (86.43%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTTASAKKEEEG---DAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT A+ K   EG   +A  EE KKSNHV RK+EKR++ R LDPHIEEQF SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

[Close]

BLAST of Lsi11G007610 vs. ExPASy Swiss-Prot
Match: Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.2e-98
Identity = 187/220 (85.00%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTTASAKKEEEGDAV-TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMA 180
           DIGRKKK          G+AV TEEVKKSNHVQRK+E RQ+ R LD H+EEQFSSGRL+A
Sbjct: 121 DIGRKKK----------GEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           CI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 CIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of Lsi11G007610 vs. ExPASy Swiss-Prot
Match: Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.0e-98
Identity = 181/221 (81.90%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTTASAKKE-EEGD----AVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSG 180
           ++GRKKK+ +S KK+ EEG+    A  EEVKKSNH+ RKI  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of Lsi11G007610 vs. ExPASy TrEMBL
Match: A0A5D3BT12 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00420 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASAKKEEEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT+ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Lsi11G007610 vs. ExPASy TrEMBL
Match: A0A1S3BRZ4 (40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASAKKEEEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT+ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Lsi11G007610 vs. ExPASy TrEMBL
Match: A0A6J1K537 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.8e-114
Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASAKKEEEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Lsi11G007610 vs. ExPASy TrEMBL
Match: A0A6J1EP23 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111436251 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.8e-114
Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASAKKEEEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Lsi11G007610 vs. ExPASy TrEMBL
Match: A0A0A0LJA0 (40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_2G059750 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.7e-114
Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASAKKEEEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT+AS KKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Lsi11G007610 vs. NCBI nr
Match: XP_008451649.1 (PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosomal protein S8-like [Cucumis melo var. makuwa])

HSP 1 Score: 422.2 bits (1084), Expect = 2.8e-114
Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASAKKEEEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT+ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Lsi11G007610 vs. NCBI nr
Match: XP_022929761.1 (40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal protein S8-like [Cucurbita moschata] >XP_022997461.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_022997462.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_023547179.1 40S ribosomal protein S8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421.8 bits (1083), Expect = 3.7e-114
Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASAKKEEEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Lsi11G007610 vs. NCBI nr
Match: XP_038891236.1 (40S ribosomal protein S8 [Benincasa hispida])

HSP 1 Score: 421.8 bits (1083), Expect = 3.7e-114
Identity = 215/219 (98.17%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASAKKEEEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT ASAKK+EEGDA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQF SGRLMAC
Sbjct: 121 DIGRKKKTLASAKKDEEGDAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFGSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Lsi11G007610 vs. NCBI nr
Match: KAG6598870.1 (40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421.4 bits (1082), Expect = 4.8e-114
Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASAKKEEEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTIASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Lsi11G007610 vs. NCBI nr
Match: KAG7029811.1 (40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113
Identity = 214/219 (97.72%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           +GISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 22  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 81

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 82  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 141

Query: 121 DIGRKKKTTASAKKEEEGDAVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 142 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 201

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 202 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 240

[Close]

BLAST of Lsi11G007610 vs. TAIR 10
Match: AT5G59240.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-99
Identity = 187/220 (85.00%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTTASAKKEEEGDAV-TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMA 180
           DIGRKKK          G+AV TEEVKKSNHVQRK+E RQ+ R LD H+EEQFSSGRL+A
Sbjct: 121 DIGRKKK----------GEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           CI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 CIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of Lsi11G007610 vs. TAIR 10
Match: AT5G20290.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 358.6 bits (919), Expect = 3.5e-99
Identity = 181/221 (81.90%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTTASAKKE-EEGD----AVTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSG 180
           ++GRKKK+ +S KK+ EEG+    A  EEVKKSNH+ RKI  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

The following BLAST results are available for this feature:

BLAST of Lsi11G007610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49199	2.3e-103	88.24	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S...	[more]
O81361	3.9e-103	87.78	40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1	[more]
Q08069	1.5e-102	86.43	40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2	[more]
Q9FIF3	2.2e-98	85.00	40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1	[more]
Q93VG5	5.0e-98	81.90	40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1	[more]

BLAST of Lsi11G007610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BT12	1.4e-114	98.63	40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BRZ4	1.4e-114	98.63	40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1	[more]
A0A6J1K537	1.8e-114	98.17	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1	[more]
A0A6J1EP23	1.8e-114	98.17	40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111436251 PE=3 SV=1	[more]
A0A0A0LJA0	6.7e-114	97.72	40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_2G059750 PE=3 SV=1	[more]

BLAST of Lsi11G007610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451649.1	2.8e-114	98.63	PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosoma...	[more]
XP_022929761.1	3.7e-114	98.17	40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal...	[more]
XP_038891236.1	3.7e-114	98.17	40S ribosomal protein S8 [Benincasa hispida]	[more]
KAG6598870.1	4.8e-114	98.17	40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7029811.1	1.1e-113	97.72	40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi11G007610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59240.1	1.6e-99	85.00	Ribosomal protein S8e family protein	[more]
AT5G20290.1	3.5e-99	81.90	Ribosomal protein S8e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.290.70		coord: 32..160 e-value: 1.7E-40 score: 139.9
None	No IPR available	GENE3D	3.10.290.70		coord: 161..212 e-value: 1.6E-20 score: 75.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	PANTHER	PTHR10394:SF18	40S RIBOSOMAL PROTEIN S8	coord: 1..217
None	No IPR available	CDD	cd11380	Ribosomal_S8e_like	coord: 5..196 e-value: 6.36976E-59 score: 180.408
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 1..196 e-value: 1.2E-55 score: 187.5
IPR001047	Ribosomal protein S8e	TIGRFAM	TIGR00307	TIGR00307	coord: 1..198 e-value: 3.2E-46 score: 154.6
IPR001047	Ribosomal protein S8e	PANTHER	PTHR10394	40S RIBOSOMAL PROTEIN S8	coord: 1..217
IPR018283	Ribosomal protein S8e, conserved site	PROSITE	PS01193	RIBOSOMAL_S8E	coord: 11..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G007610.1	Lsi11G007610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome