Lsi11G007570 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G007570
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Auxin-responsive protein
Location	chr11: 8511410 .. 8513478 (-)
RNA-Seq Expression	Lsi11G007570
Synteny	Lsi11G007570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTCGTCTCTCGTATCCATATACATATCATTTTTCTTCACCAAACAAACAAACCCAATTCTCTCTCTCTTAACGCAGATGAATGCTTTCCAGTCTCGAACGACACAATCCCCTGCTGCCGCCGCCGCCGCTGCAGAGTATTTCAAGATGAGGCGGTGGCCGGAGAGGAGACTGGGTCCGCCGCAGCAGGCGGAGGAGGAGGGGGTGGAAGATTTTGCGGCGGTGATTCCGCCAGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGTCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTAGCCAAGGCTCTAAGACGGATGTTCGTCGACGATGACGACGGCAGCGGCGGTGGTGAAAACTCCGGCGAACGACGGCTGGACCTGACGAACGCGGTTCCGGGTCATATTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAACTGGAAGTTAGTACTCATCATCCTTTTTTTTTCTCTTTCCAATTAGGTTTTAAATATTTTCTTTCTTTTTATTTTTTTGGTTTTTCTAATATATATATATAATTATAATTATAATTTGTTTGAAAATTTTGAGGTTGCTAGTTGGCTATGAATCTCATTATTCTTGAAGTTTGTTGAGATTGCACTCTTAAATTAACTTTAAAGGAAAAATAAATAAATAAATAAAAACAAAACTAGATAACTATTTCATTTTTTGAAAATTATTCTTATAAATACTAATTTTCATTTCAAACTCTATTCAATTTCTATCACTATATTAAAAAATTAAGTCCAAAAATATGTAAGTTTAAGTTTTTATATTTATTTTTACCATGTGTGAGAACCACACTGAAACTCTCATAAATTTCAAAAATAGAAAAACACAATTCTTATCAAACAACACGAAGAGTATTTTAAAAAATCCAGAAATCTTTTTAAATAAAAAAAAAATAGTTTATTTTTAGAATTTACCTAACAATCAATTGTTTAATTAGTAAAAATAAGAAAGTAAATAAGAAAACAAGCACATTTTTAAAAATAGAAATCAAAATAGTTATCAAACCAAATCTTAAATTTTTAGCTTGAAATTTTCTTATGAAATATTATTGAATTAAACTCAACTAGTGTAGGTTAGAGTTGCAACAAAGTTCTGTGTTAATTATTGTTCATATTTAAAAACTACACACAATTTAATTAAGGGTTTTTTCTTACATTTTTTTAATTCTAAAATTGAAGTGTGTACAGTTATTTCTTCCATCAGGGTAATGTAAAGATTTGTTTGATAAAGATTTTATTTTTATTTCTAAAATAACATATTTATTCATTAGATTTTATTTTTTATTTTTTCATATATTATTATTTAAATTTAATTTTCAAAAGCATAAGACTGAAATAAAATTCCCCTAGTAGTATTGACAGAAAATAAAATATTGGTTAGGTTATCCTGTACTTTAAGTTTCATATCTATTTATCGTATCTAAACTTGACTTAGTTTTAAAAAATATTAGCGATGATCATAAAAACATAAAAAATTATGAATTGTAATATTTATAGACTTAATTTTTAAAATAAAAAAACAAATGAAGCTTAAAATTTCATTAGACATAAGATTCAAATTTATATATATAGTTTGATCAATTAATTTTTTATATTTCAAGAACTACACGCAGAACTAAAGAAAATATACTTTGAAAATAGGAAAGGAGCAAAAATTTTGGATTTAAAAACATAAAAATTATTGTATTCCGTTTTTTCTCTCTAAAAAATTATGTAAATAAAGAAGAATTAATTAATAATATGAAATTTGTGTGTGTGACAGTGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGAGGAAGAGGAAATTAAATTAATATATGTGTTAAATATATATTTTATGAGAGCCATTTGTATTAATTAATATTATCTTATAATTATGATTTCTTTCAAAAAAAATTTGAAAGAAATAATAAGATTTTCCCTTTTGTTTAATGTTATTGAATGCTTCAATCTATGTTCAGTACTCTACTCAAAATATT

mRNA sequence

GGTCGTCTCTCGTATCCATATACATATCATTTTTCTTCACCAAACAAACAAACCCAATTCTCTCTCTCTTAACGCAGATGAATGCTTTCCAGTCTCGAACGACACAATCCCCTGCTGCCGCCGCCGCCGCTGCAGAGTATTTCAAGATGAGGCGGTGGCCGGAGAGGAGACTGGGTCCGCCGCAGCAGGCGGAGGAGGAGGGGGTGGAAGATTTTGCGGCGGTGATTCCGCCAGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGTCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTAGCCAAGGCTCTAAGACGGATGTTCGTCGACGATGACGACGGCAGCGGCGGTGGTGAAAACTCCGGCGAACGACGGCTGGACCTGACGAACGCGGTTCCGGGTCATATTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAACTGGAATGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGAGGAAGAGGAAATTAAATTAATATATGTGTTAAATATATATTTTATGAGAGCCATTTGTATTAATTAATATTATCTTATAATTATGATTTCTTTCAAAAAAAATTTGAAAGAAATAATAAGATTTTCCCTTTTGTTTAATGTTATTGAATGCTTCAATCTATGTTCAGTACTCTACTCAAAATATT

Coding sequence (CDS)

ATGAATGCTTTCCAGTCTCGAACGACACAATCCCCTGCTGCCGCCGCCGCCGCTGCAGAGTATTTCAAGATGAGGCGGTGGCCGGAGAGGAGACTGGGTCCGCCGCAGCAGGCGGAGGAGGAGGGGGTGGAAGATTTTGCGGCGGTGATTCCGCCAGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGTCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTAGCCAAGGCTCTAAGACGGATGTTCGTCGACGATGACGACGGCAGCGGCGGTGGTGAAAACTCCGGCGAACGACGGCTGGACCTGACGAACGCGGTTCCGGGTCATATTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAACTGGAATGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGAGGAAGAGGAAATTAA

Protein sequence

MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

Homology

[Close]

BLAST of Lsi11G007570 vs. ExPASy Swiss-Prot
Match: Q9FKM7 (Auxin-responsive protein IAA33 OS=Arabidopsis thaliana OX=3702 GN=IAA33 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.6e-35
Identity = 84/154 (54.55%), Postives = 102/154 (66.23%), Query Frame = 0


Query: 5   QSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVED--FAAVIPPVTVVLEGRAI 64
           Q R T +P     A++            G   Q     VED   ++V+PPVTVVLEGR+I
Sbjct: 25  QPRDTTTPFIPKPASKNHNNSNSSSGAAGRSFQGFGLNVEDDLVSSVVPPVTVVLEGRSI 84

Query: 65  CQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIEND 124
           CQRISL KH SY+SLA ALR+MFVD  D +          LDL+NA+PGH++AYED+END
Sbjct: 85  CQRISLDKHGSYQSLASALRQMFVDGADSTDD--------LDLSNAIPGHLIAYEDMEND 144

Query: 125 LLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 157
           LLLAGDL W DFVRVAKRIRILPVK N+R+ + N
Sbjct: 145 LLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKRN 170

[Close]

BLAST of Lsi11G007570 vs. ExPASy Swiss-Prot
Match: Q6K846 (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.6e-10
Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 53  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRL--DLTNAVP 112
           V V  EG AI +++ L  H+SY+ LA  L RMF  +D       + GE+++  D      
Sbjct: 95  VKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTND-------HQGEKKMANDDHGDAA 154

Query: 113 GHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 145
           G +V YED + D +L GD+ W+DF R  KR++IL
Sbjct: 155 GPVVTYEDGDGDWMLVGDVPWDDFARSVKRLKIL 181

[Close]

BLAST of Lsi11G007570 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 31/92 (33.70%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 53  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGH 112
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 191

Query: 113 IVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 145
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 192 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 223

[Close]

BLAST of Lsi11G007570 vs. ExPASy Swiss-Prot
Match: Q69VE0 (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA23 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.9e-09
Identity = 37/120 (30.83%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 27  WPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFV 86
           WP     P +      + + +A    V V ++G    +++ L  HA Y  L +AL  MF 
Sbjct: 65  WP-----PVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFA 124

Query: 87  D--DDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 145
                 G GGG+  G + +DL      ++  YED + D +L GD+ W  FV   KRIR++
Sbjct: 125 SCLAVRGGGGGDGEGTKLVDLVTGAE-YVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLM 178

[Close]

BLAST of Lsi11G007570 vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08
Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 36  QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGG 95
           Q+ +EEG E    V   V V ++G  I +++ L+ H SY++LA AL  MF     G    
Sbjct: 150 QKDKEEG-EKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCAS 209

Query: 96  ENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 145
            N+   +L L N+   + + YED + D +L GD+ W  FV   KR+RI+
Sbjct: 210 HNTNSLKL-LDNSAE-YQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIM 255

[Close]

BLAST of Lsi11G007570 vs. ExPASy TrEMBL
Match: A0A6J1I3D9 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111468644 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.8e-64
Identity = 136/165 (82.42%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 1   MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-----QQAEEEGVEDFAAVIPPVTV 60
           MN F S  TQSP AAAAAAEYFKMRRWPE +LGPP     QQ + E  EDFAAVIPPVTV
Sbjct: 1   MNTFHSH-TQSP-AAAAAAEYFKMRRWPETQLGPPPPLQQQQQQMEEEEDFAAVIPPVTV 60

Query: 61  VLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG----SGGGENSGERRLDLTNAVPG 120
           VLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG     GGGE SG+R+LDL NAVPG
Sbjct: 61  VLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGSGGGGEPSGDRQLDLANAVPG 120

Query: 121 HIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 157
           H+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Sbjct: 121 HLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRRRGN 163

[Close]

BLAST of Lsi11G007570 vs. ExPASy TrEMBL
Match: A0A1S3BRI6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103492920 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.6e-62
Identity = 131/148 (88.51%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 9   TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISL 68
           TQSP AAAAAAEYFKM RW ERR+GPPQQAE    EDF+AVIPPVTVVLEGRAICQRISL
Sbjct: 4   TQSP-AAAAAAEYFKMARWAERRVGPPQQAE----EDFSAVIPPVTVVLEGRAICQRISL 63

Query: 69  HKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGD 128
           HKH SYESLAKALRRMFVDDDD    GE SGERRLDLTNAVPG+IVAYEDIENDLLLAGD
Sbjct: 64  HKHGSYESLAKALRRMFVDDDD---EGEESGERRLDLTNAVPGYIVAYEDIENDLLLAGD 123

Query: 129 LNWNDFVRVAKRIRILPVKANSRRGRGN 157
           LNWNDFVRVAKRIRILPVKANSRRGR N
Sbjct: 124 LNWNDFVRVAKRIRILPVKANSRRGRAN 143

[Close]

BLAST of Lsi11G007570 vs. ExPASy TrEMBL
Match: A0A6J1FIF6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111444417 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 133/170 (78.24%), Postives = 140/170 (82.35%), Query Frame = 0


Query: 1   MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP----------QQAEEEGVEDFAAVI 60
           MN F S  TQSP   AAAAEYFKMRRWPE +LG P          ++ EEE  EDFAAVI
Sbjct: 1   MNTFHSH-TQSP---AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVI 60

Query: 61  PPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD----GSGGGENSGERRLDLT 120
           PPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD    G GGGE S +R+LDL 
Sbjct: 61  PPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLA 120

Query: 121 NAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 157
           NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Sbjct: 121 NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 166

[Close]

BLAST of Lsi11G007570 vs. ExPASy TrEMBL
Match: A0A0A0LH98 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G059200 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.2e-61
Identity = 129/148 (87.16%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 9   TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISL 68
           TQSP AAAAAAEYFKM RW +RR+ PPQQAE    EDFAAVIPPVTVVLEGRAICQRISL
Sbjct: 4   TQSP-AAAAAAEYFKMTRWADRRVSPPQQAE----EDFAAVIPPVTVVLEGRAICQRISL 63

Query: 69  HKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGD 128
           HKH SYESLAKALRRMFVDDDD    GE+SGER LDLTNAVPG+IVAYEDIENDLLLAGD
Sbjct: 64  HKHGSYESLAKALRRMFVDDDDND--GEDSGERGLDLTNAVPGYIVAYEDIENDLLLAGD 123

Query: 129 LNWNDFVRVAKRIRILPVKANSRRGRGN 157
           LNWNDFVRVAKRIRILPVKANSRRGR N
Sbjct: 124 LNWNDFVRVAKRIRILPVKANSRRGRAN 144

[Close]

BLAST of Lsi11G007570 vs. ExPASy TrEMBL
Match: A0A6J1DKE3 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111020871 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53
Identity = 113/139 (81.29%), Postives = 118/139 (84.89%), Query Frame = 0


Query: 17  AAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYES 76
           AAAEY K RRWPERR    +       ED +AVIP VTVVLEGRAICQRISLHKHASYES
Sbjct: 13  AAAEYLKKRRWPERRAVAAE-------EDVSAVIPAVTVVLEGRAICQRISLHKHASYES 72

Query: 77  LAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVR 136
           LAKALR MFV +DDG GG   SGERRLDL+NAVPGH+VAYEDIENDLLLAGDLNWNDFVR
Sbjct: 73  LAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDLNWNDFVR 132

Query: 137 VAKRIRILPVKANSRRGRG 156
           VAKRIRILPVKANSRRGRG
Sbjct: 133 VAKRIRILPVKANSRRGRG 144

[Close]

BLAST of Lsi11G007570 vs. NCBI nr
Match: XP_038890972.1 (auxin-responsive protein IAA33 [Benincasa hispida])

HSP 1 Score: 285.8 bits (730), Expect = 2.2e-73
Identity = 147/157 (93.63%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGR 60
           MNAFQSRTTQSP AAAAAAE FKMRRWPERR+GPPQQAE EG EDFAAVIPPVTVVLEGR
Sbjct: 1   MNAFQSRTTQSP-AAAAAAECFKMRRWPERRVGPPQQAEGEGEEDFAAVIPPVTVVLEGR 60

Query: 61  AICQRISLHKHASYESLAKALRRMFVDDDD-GSGGGENSGERRLDLTNAVPGHIVAYEDI 120
           AICQRISLHKHASYESLAKALRRMFVDD+D G GGGENSGER+LDLTNAVPGHIVAYEDI
Sbjct: 61  AICQRISLHKHASYESLAKALRRMFVDDEDGGGGGGENSGERQLDLTNAVPGHIVAYEDI 120

Query: 121 ENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 157
           ENDLLLAGDLNWNDFVRVAKRIRI+PVKANSRRGRGN
Sbjct: 121 ENDLLLAGDLNWNDFVRVAKRIRIMPVKANSRRGRGN 156

[Close]

BLAST of Lsi11G007570 vs. NCBI nr
Match: XP_023538318.1 (auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.0 bits (676), Expect = 4.1e-67
Identity = 139/162 (85.80%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP------QQAEEEGVEDFAAVIPPVT 60
           MN F S  TQSPAAAAAAAEYFKMRRWPE +LGPP       + EEE  EDFAAVIPPVT
Sbjct: 1   MNTFHSH-TQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVT 60

Query: 61  VVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIV 120
           VVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG GGGE SGER+LDL NAVPGH+V
Sbjct: 61  VVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG-GGGEPSGERQLDLANAVPGHLV 120

Query: 121 AYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 157
           AYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Sbjct: 121 AYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 160

[Close]

BLAST of Lsi11G007570 vs. NCBI nr
Match: KAG6586078.1 (Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65
Identity = 135/167 (80.84%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 1   MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-------QQAEEEGVEDFAAVIPPV 60
           MN F S T    AAAAAAAEYFKMRRWPE +LGPP       +  EEE  EDFAAVIPPV
Sbjct: 1   MNTFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPV 60

Query: 61  TVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD----GSGGGENSGERRLDLTNAV 120
           TVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD    G GGGE SG+R+LDL NAV
Sbjct: 61  TVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSGDRQLDLANAV 120

Query: 121 PGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 157
           PGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Sbjct: 121 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 167

[Close]

BLAST of Lsi11G007570 vs. NCBI nr
Match: XP_022969694.1 (auxin-responsive protein IAA33 [Cucurbita maxima])

HSP 1 Score: 253.1 bits (645), Expect = 1.6e-63
Identity = 136/165 (82.42%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 1   MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-----QQAEEEGVEDFAAVIPPVTV 60
           MN F S  TQSP AAAAAAEYFKMRRWPE +LGPP     QQ + E  EDFAAVIPPVTV
Sbjct: 1   MNTFHSH-TQSP-AAAAAAEYFKMRRWPETQLGPPPPLQQQQQQMEEEEDFAAVIPPVTV 60

Query: 61  VLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG----SGGGENSGERRLDLTNAVPG 120
           VLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG     GGGE SG+R+LDL NAVPG
Sbjct: 61  VLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGSGGGGEPSGDRQLDLANAVPG 120

Query: 121 HIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 157
           H+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Sbjct: 121 HLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRRRGN 163

[Close]

BLAST of Lsi11G007570 vs. NCBI nr
Match: XP_008451708.1 (PREDICTED: auxin-responsive protein IAA33 [Cucumis melo])

HSP 1 Score: 246.9 bits (629), Expect = 1.2e-61
Identity = 131/148 (88.51%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 9   TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISL 68
           TQSP AAAAAAEYFKM RW ERR+GPPQQAE    EDF+AVIPPVTVVLEGRAICQRISL
Sbjct: 4   TQSP-AAAAAAEYFKMARWAERRVGPPQQAE----EDFSAVIPPVTVVLEGRAICQRISL 63

Query: 69  HKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGD 128
           HKH SYESLAKALRRMFVDDDD    GE SGERRLDLTNAVPG+IVAYEDIENDLLLAGD
Sbjct: 64  HKHGSYESLAKALRRMFVDDDD---EGEESGERRLDLTNAVPGYIVAYEDIENDLLLAGD 123

Query: 129 LNWNDFVRVAKRIRILPVKANSRRGRGN 157
           LNWNDFVRVAKRIRILPVKANSRRGR N
Sbjct: 124 LNWNDFVRVAKRIRILPVKANSRRGRAN 143

[Close]

BLAST of Lsi11G007570 vs. TAIR 10
Match: AT5G57420.1 (indole-3-acetic acid inducible 33 )

HSP 1 Score: 148.7 bits (374), Expect = 4.0e-36
Identity = 84/154 (54.55%), Postives = 102/154 (66.23%), Query Frame = 0


Query: 5   QSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVED--FAAVIPPVTVVLEGRAI 64
           Q R T +P     A++            G   Q     VED   ++V+PPVTVVLEGR+I
Sbjct: 25  QPRDTTTPFIPKPASKNHNNSNSSSGAAGRSFQGFGLNVEDDLVSSVVPPVTVVLEGRSI 84

Query: 65  CQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIEND 124
           CQRISL KH SY+SLA ALR+MFVD  D +          LDL+NA+PGH++AYED+END
Sbjct: 85  CQRISLDKHGSYQSLASALRQMFVDGADSTDD--------LDLSNAIPGHLIAYEDMEND 144

Query: 125 LLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 157
           LLLAGDL W DFVRVAKRIRILPVK N+R+ + N
Sbjct: 145 LLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKRN 170

[Close]

BLAST of Lsi11G007570 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 31/92 (33.70%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 53  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGH 112
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     
Sbjct: 131 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 190

Query: 113 IVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 145
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 191 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 222

[Close]

BLAST of Lsi11G007570 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 31/92 (33.70%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 53  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGH 112
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 191

Query: 113 IVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 145
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 192 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 223

[Close]

BLAST of Lsi11G007570 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 31/92 (33.70%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 53  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGH 112
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     
Sbjct: 131 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 190

Query: 113 IVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 145
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 191 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 222

[Close]

BLAST of Lsi11G007570 vs. TAIR 10
Match: AT4G28640.3 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09
Identity = 36/106 (33.96%), Postives = 54/106 (50.94%), Query Frame = 0


Query: 53  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLD---LTNAV 112
           V V ++G  I ++I L+ H  YESL+  L  MF+    GS   E  G        L +  
Sbjct: 139 VKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGS 198

Query: 113 PGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG 156
            G ++ YED E D +L GD+ W  F+   +R+RI+  K +   G+G
Sbjct: 199 SGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIM--KTSEATGKG 242

The following BLAST results are available for this feature:

BLAST of Lsi11G007570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKM7	5.6e-35	54.55	Auxin-responsive protein IAA33 OS=Arabidopsis thaliana OX=3702 GN=IAA33 PE=1 SV=...	[more]
Q6K846	3.6e-10	39.36	Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 P...	[more]
Q38831	1.8e-09	33.70	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]
Q69VE0	6.9e-09	30.83	Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA23...	[more]
A2XB18	2.6e-08	35.78	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P...	[more]

BLAST of Lsi11G007570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3D9	7.8e-64	82.42	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111468644 PE=3 SV=1	[more]
A0A1S3BRI6	5.6e-62	88.51	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103492920 PE=3 SV=1	[more]
A0A6J1FIF6	1.2e-61	78.24	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111444417 PE=3 SV=1	[more]
A0A0A0LH98	6.2e-61	87.16	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G059200 PE=3 SV=1	[more]
A0A6J1DKE3	1.2e-53	81.29	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111020871 PE=3 SV=...	[more]

BLAST of Lsi11G007570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890972.1	2.2e-73	93.63	auxin-responsive protein IAA33 [Benincasa hispida]	[more]
XP_023538318.1	4.1e-67	85.80	auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]	[more]
KAG6586078.1	2.9e-65	80.84	Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022969694.1	1.6e-63	82.42	auxin-responsive protein IAA33 [Cucurbita maxima]	[more]
XP_008451708.1	1.2e-61	88.51	PREDICTED: auxin-responsive protein IAA33 [Cucumis melo]	[more]

BLAST of Lsi11G007570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57420.1	4.0e-36	54.55	indole-3-acetic acid inducible 33	[more]
AT2G33310.1	1.3e-10	33.70	auxin-induced protein 13	[more]
AT2G33310.2	1.3e-10	33.70	auxin-induced protein 13	[more]
AT2G33310.3	1.3e-10	33.70	auxin-induced protein 13	[more]
AT4G28640.3	1.9e-09	33.96	indole-3-acetic acid inducible 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 47..144 e-value: 5.9E-15 score: 55.8
None	No IPR available	GENE3D	3.10.20.90		coord: 50..154 e-value: 4.3E-20 score: 73.6
None	No IPR available	PANTHER	PTHR31734:SF7	AUXIN-RESPONSIVE PROTEIN IAA33	coord: 31..153
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 31..153
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 50..148 score: 15.987419

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G007570.1	Lsi11G007570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding