Lsi11G007160 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi11G007160
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionperiodic tryptophan protein 1 homolog
Locationchr11: 7671712 .. 7679505 (+)
RNA-Seq ExpressionLsi11G007160
SyntenyLsi11G007160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAATGCTACTTCTCCAAAACGTGAGAAGGCTATTTCTGACTATTTTCCCTAAATCTAACCCTTCACTTCATTCTTCACTTCGCGCAAGCCACCGCCGACCTCCACGTTTCCTAGCCATCCGAAGCTCAGCGCCACCTCCACCCACCGTCAACACATCACTTCGGAAGCACATCCGTGACTTTTCCCTGACCACCAGCGCCAGTACACCACTTCGACAGCACACCCACCGCCGACAGTCTTCCATTCCCTGGACCAGCGACAACCATTGACGATTACCTTGAGGTTAATGTTCAATATCATTCACGATTTTAGTGTATTTCCAAGTATGATTTTAAAGTTTGATATGTTGGGACTTTGGTATTGAATTTAAGTTAGGGCTTGGGTTTTCGGTGTAGGAGACGGAATCCTACTGCCTTGCGTTTCTTTTTCTTTTCTTTTCTTCAGTTTACTTTCCCCACCTTCATACCAACTCCCACGTTTAAGAGAAAATGATATCTGCGGTTTCATGGGTTCCTAAAGGAGTCTGTAAGCCTCTTCCAGACCTGGCAGATCCTCCCTCCAAGGAGGCTATTGATGAACTCCTCAAAAGCAACCATGTCCTCGAGGATTCCAGGTATCAGAAAATTTCTATTGATTCTACTTCTGTTTTAGCTATATTCTTTTCACTGACCACTCACCTTTAATCTATTGTAAGGAGGGTTAATTTAGTTTTGGAGTTTGGATGCTTTAGTCTTAATCTTTACTGCTTTTTGGATTAGATTGAGTTGTATCAGAATGTAGTATTGATAATTATACAAATATAATAGATGAATAAGGCGAAGACTTTCAGTTTCAGGGAATGTGTTTTGTGGTAGTGCCTAGCGATTATGCATTTATTTCATGATTTTGGTGTTATTTCTTTGCATATGTTAATTCCATGTCTTCATATTTTGAAAACTATGACTTGGTCTTTGCAGTAAACATAGTGATGATGAGGCTGATGAAGAAGATATGGATGTTGGAGATGCCAACGATGAAGAGATTGCCAATGCACTAGCTGTTGCGCAAGCACTTGGAAAATCTTCTGAGATCACTAAGTTAGAAACCAAATATGATGATATTGCTGAAGGTTTGAAGGAACTCGACATGGATAATTATGATGATGAAGATGATGGTATTCTCATCCTCCTGCCCTCCCTGATTTAACTTCCCCTTTGCTCTTTTCTGTTATTAGTTTTTTGTTGTTGTTATTTTTCATATTGAGATGATTATGAGGGGTCATGTTTTTATAAGCTACCACCATAACACTGCAACCGGATTATGATTTATGACACTTCTTAACTAATTTGACCTTCTATCACTTCACTGCAATTTATCTTTCATTGGGTGTATTGCTGAGGCTATTCCTTATTGTGGTTTGGTTTGCTTTAGAGATTGAGTTATTTACCTCCGGAGCTGGAGACATTTACTACCCAACTAATGACATGGACCCATATCTCAAGGACAAGGATGTAAGTTATTTACTGAACATTGATATTTGTCTGATTTAGTTCACTATGTTGTTACTTGTATATCTTTCTTTACTGTTATAGGGTGATGACTCTGAAGATATTGAGGATGAGACCATCAAACCGACAGATGCGGTCATACTTTGTGCATGTAGTGAAGATAACGTCAGTGCTCTCCAGGCATGTGGTGCACTAGAACTAATTCCTATTTCCCCTTTCTTGTCCTCAAATCAATCAAGAAAAATTTGTTTTAGTGACACTTACCAGGGGTTAATTTCTAAGCAGGTATGGATATGTGAAGGATATGATGCAGGTGATCCAAACTTCTATATTCACCATGATATAATTATTCCAGCATTTCCTCTTTGCACAGCTTGGCTAGATTGTCCTCTGAAGGGTGGAGAAAGAGGTATTGTGTTTCCATTAATTCTTTTCAGTGTCAGGTTTTCGTTAATTCTGTTTATAGTTTACTGAATGGAAAAACAAATGGAAATTTGTTCTAAATCAAATCTCTGGCACTTGATCTGGAAATTTAGAATGTTTTCATCAATTCTGCTCATAGTTTAGTGAATGGAAAAACAAATGGACATTTGTTCTAACTTTTGAATCAAATCTCTGGCACTTGATTTGAAAATTTAGGTAAGTGGGTTTTGAAGAGTAGTTCTGATCTGCTTGGTTGGGGAATTGAAATTCTTATCAATTATATATTTTTTCTTTGGGAGTTAATTCAGAACTTGAATGAAATTATCCATGTGTGAGGCATTTTTAGATTATTGCCACTAGCAACAACCTCAATTTTACACATAATTCAGCCATTTTTATTGACTACTTTATCCACTTGGTGCCAGGGAACTTTATTGCAGTTGGTTCGATGGAACCTGCGATCGAGATATGGGACCTTGACATTGTATGTTTATGTGAATTTTTAGGTGACTGACATTACATCTTGTAACAAACATGTCATATTAAGTCTCCTTCTTTATGTTTGTCTAGATTGACGAGGTGCAACCATGTGCGGTGTTAGGTGGAATTGTTGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAAAGAAAGTAAGCTGCTTGCTTTCTCGTTAAGGCTCTTTCAAATTTCCCTTTTCAATCATTTTGCCTGAAATTGTTGACCCACTTCCATCTTGGTGTTATTTTGTTTCAAATTCTTGATTGCGTGAGCTTAAAATTTCCAGTTCTTCTTTTAAGCCTTTACTAATTTTACGAACTCCATATCTTGTTTTGCTAGACATCAGTTACATACAAAGAGAACAGTCACACGGATTCAGTACTTGGACTTGCTTGGAACAAGGAATATAGGTCTGTTTAGGATTATTTTGTAACTGTTTTAGTTGTTTCAAGAAGATGTTTAAGTGCATTATGATTCACTGTTAATTTTCCCCATAACAAACAGGAATATACTTGCTAGTGCAAGTGCTGATAAGCAAGTCAAGATTTGGGACGTGTCTACTGGACAATGTAATATAACTATGCAGCATCATACAGACAAGGTAAGAATCTCGGTTGTATTCATACATTAATAGCTTTAAAATTGGTTTATATAATTGTACTAAAGGTCTAAATTGGTTTCTTAACGTGTTCTCTATCCCAAGGAAGATCGATGGTTCAAATTGTTTTCAAGTATTCACCTTAGCTTATTTTTTTATGTATTCGAAGCTTACATGAACAACAAATGCTGCCTTTTATACTCATAAGCCCAATTTGCACGACATACTGCATATGCATCTTGGTTCTTATTAAAACACATGAAAACGATGGCTCTCTTTATTTTCTTCTATTCAATAATCTTTTTTGGTTTTTTATTCTATTTTTAAATTGATCCTATGGCCTCAAACCTACCTCCCACCTTGTTAAATGGAATTGGGCCTCTCTCTCTACTATCTATGGTGGCCTTGCAATTGGGTCCCTTTTGCTCTTCTTATGAAATGGCTTTGGAGGTTTTGTCATGAAGAAAAGGCTCTGTGGAGACGAATTATTGGTGCTATTTATGGTGTTGATGCTCATAGTTGGATTTCAAATATGCCCAAGAGGGGAAGAAAATTTAGACTTTGGGCTGGCATCTTAAAGCATAAATAATAGTAGAGATGTTAAAGTTCTAAAGATATCCTTTTAGAATTTTTATGGAAAAAGTCAATCCTCTTGGCAATACTTGATCACACAAATTTAGGATTTGTATAGTATTTTTAGTTAAAATTGAGGCTTACACCTTGTCTCTTCAAGAGGAAAAATCTCAAGGATGCCTTTAGCCTTTAAAAACACTGGTCCTATCCATATCATTCAAGGAAGAAAGTGAATTTTTTAGCATACGTTGTGGTTAGGGAAGTTGGAGGGTATAAGGTCTTTAGCATGGCATGTATTGGACTGATAGAGTAGAATCATGTGGAATCTTTGGGATGAAAGAAATAATAGTATTTGGAGAGAGATTCTAGCAATGTTCTGTCCCTTATCAGATTTCATGTTTCTTTTTGAGATTTGATTTCAAGGATGCCTTTAGTGTCCTATCCATATCATTCAATAGAAGGAAGAAAGTGAATGTTTTGGCATACATTGTGGTTAGGGAAGCTGGAGGGTATAAGGTCTTTAGCATGGCATGTATTGGACTGATAGAGTAGAATCATGTGGAATCTTTGGGATGAAAGAAATAATAGTGTTTGGAGAGAGATTCTAGCAATGTTCTGTCTCTTATCAGATTTCATGTTTCTTTTTGGGATTTGATTTCATGGATGCCTTTAGCGTCCTATCCATATCATTCAATAGAAGGAAGAAAGTGAATGTTTTGGCATACGTTGTGGTTAGGGAAGCTGGAGGTATAAGGTCTTTAGCATGGCATGTATAGGACTGATAGACTAAAATCATTTGGAGTCTTTGGGATTAAAGAAATGATAGAGTGTTTAGAGGTTTGGAGAGAGATCCTAGCGATGTTTGGGTCCTTATTGGATTTCATGTTTCTCTTTGGGTTTTGGTTTCAAAGTTTTTCAAACTATTCTATAGGCATTATTTTGCTTGATTGGAGCCCTTTTCTCTAATTGAGTTTCCTTTTGTCAGATGTTGGACCATAGTAAGGTCTTTTGTATTTGCAAAGCTGTTAGTGTGGGAGTGAACAGGGGAGTTGAATGTGATAAGAAGATTTTTAAAGCCTCTCAAAAGCTCGGAGGGTTTTTGGAATTTCCCCTCAGAATTGATTCATTACAAATTTTATCCTTTTCTATCGTGTTGTATTCTTTCATTATATTAATGTTAACTTGGAAGAGTTTCATGATGAGTGTTGTTCATCTTGTAAATCCTGTAAAAATTCTTAGCTATATGCATTTACGAATATAGATTATCATCTGTGACGTTTCAAATTGGTGCCGCATGATGTTTTGTTGATTATATTTTACTTTCCAGGTTCAAGCTGTTGCATGGAATCATCATTCGTCACAAGTCCTCCTCAGTGGATCTTTTGATCATTCAGTAGTTTTGGTAATACGAGATATTTCTACTGACTTTTTTGCATTCTCTTGTGGGATTACAATGATGCTGTTTAACTTAATTTTTTTTTACACAAGTTTATCTTCATGTTAAATTTCATTTTGATCCCTATACTTTGGGTGTTATTATATTTTAATTCATGTGCTTTAAGTTTTATTCCATTTTAATCGATTTATTTTCAAATTTCTAAATTTGGTCTCTGTACTTTCAATCATTGTCAGTTTGAAGTTAATTTTTATTGCAATTGGTAAAATAATAATAATTCCATTCAAGATAGAATGCAATGTGACTATCTTTCCGTACTTTATAGAGTGAAGGTGTTAGACCACCAACATTGATCACATATGTCAGGACAAAGAAAGGGAAGGAGAAAGGAAAGGAAGGGGTTAAGGAAGGGGAAGCATCAACCAATAGTTAAAGAATTAAGTTATTAGTAGTTATTTTATACCGTTGTTTAGTTATATATACGTTTGTGTGTGTTGTTGGTTTTTATCTGGTTTTTATGTGTTAGGAGGAACTTTCTCTCTAGAGAAGGGAGATTGTGGATAGATGTATCTTTTACTTTCTTTCTTTTAAAGTTATAACAAAGATCCTGATAGGTCCCTATCAGAAGGTTAACAAAGACTAAATTTGCTTGGGAAAAGTTATAGAGAGTAATTTTAAGATTTATTGAACATTTGAAGTAGAAAAGTAAACTAAAACAAGTCTCTAGTCTAAGTTCAAGGTCGAAGGTCCAAACTATTTCAACCTTGGTTTTATAGTTTCTCATCATAGCTTGAACTTTCTGGTTTTATGTTTTTATGTAATTCAGAAAGATGGGAGAAATCCTTCCCATTCAGGTTACAAGTGGCAAGTTACAGCAGATGTGGAGAGCTTGGCATGGGATCCACATACAGAGCACATGTTTGTGGTGTGTATTCTTGCTTCCACAGATCTGGCTTTGAAGATTCCTGTTCTTGGCTTCACAATTCACTCATTGATTTAAATTTCTTTATTTTGTTCCTATCAACTATTAATTTATTCAGTGAGTTCGGTTTTTGAAGTATGATTTGTACAATTTTGTGCAGGTGAGTCTAGAGGATGGTACAGTGAAAGGTTTTGATATCCGTAATGCCACTACAGAGACTAGTTCTGAATCAAAAGCAAGTTTTACTCTCCATGCGCACGAGAAAGCTGTCTGCTCAGTTTCTTACAATCCCTTAGCACCTAATGTACTTTGCTGTTCTTTTCTTCTCTTTATTGCTCAACCTTTCCCCCTCCTCTCCCATCCTTTGTGTTTCCTACTTGCCAGCTTTGTCTTGATTACTAACTTCTGTTTGTCTGTACTCTTCTCCAGCTACTTGCTACTGGATCTACTGATAAAATGGTACTTCATAATCCCTTTATATTGCGCTTGTAAATGCTATAAAAAAGGTATTTGTTTAGTTTGTCATTGACTCAAAATCTCTTGTGCAGGTTAAATTATGGGACTTGTCCAATAATGAACCTTCATGTGTGGCATCCACGAATCTTAAAGCAGTAAGTAATACGATTTTGCTGGATAAGTTATATGCATAGCATCAACTTCTAACATTCATTTTGTTATTCTTTAACCGTTCCAGGGAGCTGTGTTTTCGGTTGCTTTCGCAGAAGATTGTCCCTTTTTGCTAGCTATTGGAGGCTCCAAGGGAAAATTGGAGGTGAGTATATAATGTCTAGATGTATTTTCATTTAATTTTATTGAAAGTGGTTTTCTGAAATATTTATGCTTTAGTTTGAATTTTTAGTCAAGATCTAAAAACAAAACAAGTTTTTAAAAACTATTGTTCTTAATTTTGAAATTTTGGATTGGACTTTGATCACCTCTAGGGAGTAGATAATGAACAAAGAAATGATAGGTGGAAGTAGTGTTTATAGGCTTAATTTTCTAAAACCAAAAACTAAAAACTAAGGTCTCGTTTGGTAACCATGTGGTTTTTAGTTTTTGGTTTTTGAAAATCAAGCCTATAAACATCATCTCTATTTGGTTTATATGTTTTATTGTCTAGATTTTAGGAATGTTTTCAAAATCAAAGCCAAATTTTGAAAAACTAAAGAAAGTAGTTTTAACGAACTTGTTTTTGTCTTTGGAAATTAGCTAAGAACTCACATGTTTATATAAGAATATGAAAACCATGAGTGAGAAATTGCGAGAAAACAAATACAATTTTCAAAAACTAAAAACAAAATGGTTATCAAATGAGTCCTAAATTACTATCAAAGGAGGCTTTGGTAGTCGTAAATTATTATCGATAAATTATTATTTTTGCAGGTGTGGGATACATTAACTGATGCTGCAGTGTCTCGGAAGTATGGAAATTATAGGCAGAGGAGATCTTAAATTGTTAAACTATTGAGTTATGATAAATATAGATGAAAAATGTTTGGTTGTGTAGGTAGGTAGTTTTTGGGATCTTTTTTTAGACAAACTTGGGCTTTGTCCTTCAAATTTTGTAGCTGTGTTGAGTTTGCCACTTTTCAATTCCCTGCATTTTCTTGTGGCGCAGGGTATACCTAAAAACTTGCTGAGTATATATTATCTCTTACCTCCACCCAGAAAGAAATGTTTATTAAAAAAAAAAAAAAAGTTAATGAATCCTTAGAGCTCATATTTCATTGCAGTTTTGCTGCGAATATAGAGATGTCTATTTTTCCTATGGGACGGGATCCTGTGGGGACCCACTTCGAACGGGATAGGAATTTCCGGTTTAGGTAGGGAATGGAGAGGAAGTGGGAAAAAATTCTAGTTAAATGGAGACGGAATAGGGGACATTTTCGCTCC

mRNA sequence

AAAAAATGCTACTTCTCCAAAACGTGAGAAGGCTATTTCTGACTATTTTCCCTAAATCTAACCCTTCACTTCATTCTTCACTTCGCGCAAGCCACCGCCGACCTCCACGTTTCCTAGCCATCCGAAGCTCAGCGCCACCTCCACCCACCGTCAACACATCACTTCGGAAGCACATCCGTGACTTTTCCCTGACCACCAGCGCCAGTACACCACTTCGACAGCACACCCACCGCCGACAGTCTTCCATTCCCTGGACCAGCGACAACCATTGACGATTACCTTGAGGAGACGGAATCCTACTGCCTTGCGTTTCTTTTTCTTTTCTTTTCTTCAGTTTACTTTCCCCACCTTCATACCAACTCCCACGTTTAAGAGAAAATGATATCTGCGGTTTCATGGGTTCCTAAAGGAGTCTGTAAGCCTCTTCCAGACCTGGCAGATCCTCCCTCCAAGGAGGCTATTGATGAACTCCTCAAAAGCAACCATGTCCTCGAGGATTCCAGTAAACATAGTGATGATGAGGCTGATGAAGAAGATATGGATGTTGGAGATGCCAACGATGAAGAGATTGCCAATGCACTAGCTGTTGCGCAAGCACTTGGAAAATCTTCTGAGATCACTAAGTTAGAAACCAAATATGATGATATTGCTGAAGGTTTGAAGGAACTCGACATGGATAATTATGATGATGAAGATGATGAGATTGAGTTATTTACCTCCGGAGCTGGAGACATTTACTACCCAACTAATGACATGGACCCATATCTCAAGGACAAGGATGGTGATGACTCTGAAGATATTGAGGATGAGACCATCAAACCGACAGATGCGGTCATACTTTGTGCATGTAGTGAAGATAACGTCAGTGCTCTCCAGGCATGTGGTGCACTAGAACTAATTCCTATTTCCCCTTTCTTGTCCTCAAATCAATCAAGAAAAATTTGTTTTAGTGACACTTACCAGGGGTTAATTTCTAAGCAGGTATGGATATGTGAAGGATATGATGCAGGTGATCCAAACTTCTATATTCACCATGATATAATTATTCCAGCATTTCCTCTTTGCACAGCTTGGCTAGATTGTCCTCTGAAGGGTGGAGAAAGAGGGAACTTTATTGCAGTTGGTTCGATGGAACCTGCGATCGAGATATGGGACCTTGACATTATTGACGAGGTGCAACCATGTGCGGTGTTAGGTGGAATTGTTGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAAAGAAAACATCAGTTACATACAAAGAGAACAGTCACACGGATTCAGTACTTGGACTTGCTTGGAACAAGGAATATAGGAATATACTTGCTAGTGCAAGTGCTGATAAGCAAGTCAAGATTTGGGACGTGTCTACTGGACAATGTAATATAACTATGCAGCATCATACAGACAAGGTTCAAGCTGTTGCATGGAATCATCATTCGTCACAAGTCCTCCTCAGTGGATCTTTTGATCATTCAGTAGTTTTGAAAGATGGGAGAAATCCTTCCCATTCAGGTTACAAGTGGCAAGTTACAGCAGATGTGGAGAGCTTGGCATGGGATCCACATACAGAGCACATGTTTGTGGTGAGTCTAGAGGATGGTACAGTGAAAGGTTTTGATATCCGTAATGCCACTACAGAGACTAGTTCTGAATCAAAAGCAAGTTTTACTCTCCATGCGCACGAGAAAGCTGTCTGCTCAGTTTCTTACAATCCCTTAGCACCTAATCTACTTGCTACTGGATCTACTGATAAAATGGTTAAATTATGGGACTTGTCCAATAATGAACCTTCATGTGTGGCATCCACGAATCTTAAAGCAGGAGCTGTGTTTTCGGTTGCTTTCGCAGAAGATTGTCCCTTTTTGCTAGCTATTGGAGGCTCCAAGGGAAAATTGGAGGTGTGGGATACATTAACTGATGCTGCAGTGTCTCGGAAGTATGGAAATTATAGGCAGAGGAGATCTTAAATTGTTAAACTATTGAGTTATGATAAATATAGATGAAAAATGTTTGGTTGTGTAGGTAGGTAGTTTTTGGGATCTTTTTTTAGACAAACTTGGGCTTTGTCCTTCAAATTTTGTAGCTGTGTTGAGTTTGCCACTTTTCAATTCCCTGCATTTTCTTGTGGCGCAGGGTATACCTAAAAACTTGCTGAGTATATATTATCTCTTACCTCCACCCAGAAAGAAATGTTTATTAAAAAAAAAAAAAAAGTTAATGAATCCTTAGAGCTCATATTTCATTGCAGTTTTGCTGCGAATATAGAGATGTCTATTTTTCCTATGGGACGGGATCCTGTGGGGACCCACTTCGAACGGGATAGGAATTTCCGGTTTAGGTAGGGAATGGAGAGGAAGTGGGAAAAAATTCTAGTTAAATGGAGACGGAATAGGGGACATTTTCGCTCC

Coding sequence (CDS)

ATGATATCTGCGGTTTCATGGGTTCCTAAAGGAGTCTGTAAGCCTCTTCCAGACCTGGCAGATCCTCCCTCCAAGGAGGCTATTGATGAACTCCTCAAAAGCAACCATGTCCTCGAGGATTCCAGTAAACATAGTGATGATGAGGCTGATGAAGAAGATATGGATGTTGGAGATGCCAACGATGAAGAGATTGCCAATGCACTAGCTGTTGCGCAAGCACTTGGAAAATCTTCTGAGATCACTAAGTTAGAAACCAAATATGATGATATTGCTGAAGGTTTGAAGGAACTCGACATGGATAATTATGATGATGAAGATGATGAGATTGAGTTATTTACCTCCGGAGCTGGAGACATTTACTACCCAACTAATGACATGGACCCATATCTCAAGGACAAGGATGGTGATGACTCTGAAGATATTGAGGATGAGACCATCAAACCGACAGATGCGGTCATACTTTGTGCATGTAGTGAAGATAACGTCAGTGCTCTCCAGGCATGTGGTGCACTAGAACTAATTCCTATTTCCCCTTTCTTGTCCTCAAATCAATCAAGAAAAATTTGTTTTAGTGACACTTACCAGGGGTTAATTTCTAAGCAGGTATGGATATGTGAAGGATATGATGCAGGTGATCCAAACTTCTATATTCACCATGATATAATTATTCCAGCATTTCCTCTTTGCACAGCTTGGCTAGATTGTCCTCTGAAGGGTGGAGAAAGAGGGAACTTTATTGCAGTTGGTTCGATGGAACCTGCGATCGAGATATGGGACCTTGACATTATTGACGAGGTGCAACCATGTGCGGTGTTAGGTGGAATTGTTGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAAAGAAAACATCAGTTACATACAAAGAGAACAGTCACACGGATTCAGTACTTGGACTTGCTTGGAACAAGGAATATAGGAATATACTTGCTAGTGCAAGTGCTGATAAGCAAGTCAAGATTTGGGACGTGTCTACTGGACAATGTAATATAACTATGCAGCATCATACAGACAAGGTTCAAGCTGTTGCATGGAATCATCATTCGTCACAAGTCCTCCTCAGTGGATCTTTTGATCATTCAGTAGTTTTGAAAGATGGGAGAAATCCTTCCCATTCAGGTTACAAGTGGCAAGTTACAGCAGATGTGGAGAGCTTGGCATGGGATCCACATACAGAGCACATGTTTGTGGTGAGTCTAGAGGATGGTACAGTGAAAGGTTTTGATATCCGTAATGCCACTACAGAGACTAGTTCTGAATCAAAAGCAAGTTTTACTCTCCATGCGCACGAGAAAGCTGTCTGCTCAGTTTCTTACAATCCCTTAGCACCTAATCTACTTGCTACTGGATCTACTGATAAAATGGTTAAATTATGGGACTTGTCCAATAATGAACCTTCATGTGTGGCATCCACGAATCTTAAAGCAGGAGCTGTGTTTTCGGTTGCTTTCGCAGAAGATTGTCCCTTTTTGCTAGCTATTGGAGGCTCCAAGGGAAAATTGGAGGTGTGGGATACATTAACTGATGCTGCAGTGTCTCGGAAGTATGGAAATTATAGGCAGAGGAGATCTTAA

Protein sequence

MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDANDEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDIYYPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPFLSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKGGERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSHTDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVLLSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNATTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTNLKAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQRRS
Homology
[Close]
BLAST of Lsi11G007160 vs. ExPASy Swiss-Prot
Match: Q9P775 (Uncharacterized WD repeat-containing protein C17D11.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1711.16 PE=1 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.4e-74
Identity = 187/535 (34.95%), Postives = 289/535 (54.02%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDL--ADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGD 60
           ++S+V++VP+G     P     D    E I++L K    LED+   +D ++  ED +  +
Sbjct: 3   IVSSVAFVPRGYASEFPKSYDIDEIEYERINQLSKLK--LEDA--RADLQSSMEDSNKAN 62

Query: 61  ANDEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIE------LF 120
            N EE  +    A+ + ++SE         ++ + LK  ++D YDD+++E E      +F
Sbjct: 63  GNGEETTDG---AEGVLQTSE---------EVDDELKVYNLDTYDDDEEEAETEGPAAMF 122

Query: 121 TSGAGDIYYPTNDMDPYLK-DKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGAL 180
           ++  G  Y+   + DPY+  D    D  + E+  I PTD+++L A +EDN+S +      
Sbjct: 123 SNIRGLAYHENGEKDPYITIDPQEQDDLEREEMQILPTDSLLLAARTEDNLSHV------ 182

Query: 181 ELIPISPFLSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTA 240
                                        +V++   Y+  + N Y+HHD ++P FPLC  
Sbjct: 183 -----------------------------EVYV---YEPTEENLYVHHDFLLPTFPLCLE 242

Query: 241 WLDCPLKGGER--GNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKK 300
           WLD  +   +   GN++AVG+ +P IEIWDLDIID V P AVLG     +  KKKKK KK
Sbjct: 243 WLDYKVGTSDNAPGNYVAVGTFDPEIEIWDLDIIDAVYPAAVLGA-GASQVNKKKKKSKK 302

Query: 301 TSVTYKENSHTDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAV 360
            + +Y    HTD+VL L+ N+   N+L S SAD  +K+WD+ST  C  +  +H+DKV  +
Sbjct: 303 INDSY----HTDAVLALSSNRNAHNLLVSGSADTTLKLWDLSTCNCVKSFTYHSDKVSCL 362

Query: 361 AWNHHSSQVLLSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDG 420
            W   +  VLLSGS+D +  + D R    +   +QVT+DVE++AWD H+E+ F +  ++G
Sbjct: 363 DWYSKAPSVLLSGSYDKTAKIADLR-LEEAPSSFQVTSDVENVAWDQHSENNFFIGTDNG 422

Query: 421 TVKGFDIRNATTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSN 480
            V   D RN        SK+ + L AH+  +  +S NP  P+ +ATGSTD++VKLW+ S+
Sbjct: 423 IVYYCDARNL-------SKSVWQLQAHDGPISCLSVNPSVPSFVATGSTDRVVKLWNTSD 470

Query: 481 NEPSCVASTNLKAGAVFSVAFA--EDCPFLLAIGGSKGKLEVWDTLTDAAVSRKY 523
           + P  V S +L  G VF+ +F   E   F LA  GSKG + VWDT T+  V + +
Sbjct: 483 SSPKMVVSRDLDVGRVFTCSFTTDESTAFHLAASGSKGVVRVWDTATNPGVRKAF 470

[Close]
BLAST of Lsi11G007160 vs. ExPASy Swiss-Prot
Match: Q99LL5 (Periodic tryptophan protein 1 homolog OS=Mus musculus OX=10090 GN=Pwp1 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.1e-73
Identity = 179/525 (34.10%), Postives = 268/525 (51.05%), Query Frame = 0 

Query: 2   ISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDAND 61
           ++ V+WV +GV K  PD  +  SKE +      N ++ ++     +E   E+ + G+ ++
Sbjct: 7   VTCVAWVRRGVAKETPDKVE-LSKEEV------NRLIAEAKGKLQEEGGSEEEEAGNPSE 66

Query: 62  EEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDED--DEIELFTSGAGDI 121
           + + +    A       +    + +  D  E L   D+DNYD+ED  D   +  S  G  
Sbjct: 67  DGMQSGPTQAPPRESLEDGDPQDDRTLDDDE-LAGYDLDNYDEEDNPDAETIGESLLGLT 126

Query: 122 YYPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPF 181
            Y +ND DPY+  KD +  E  ED  IKPTD +I+C  +E     L+             
Sbjct: 127 VYGSNDQDPYVTLKDTEQYEH-EDFLIKPTDNLIVCGRAEQEQCNLEV------------ 186

Query: 182 LSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDC-PLK 241
                                       Y+  + +FY+HHDI++ A+PL   WL+  P  
Sbjct: 187 --------------------------HVYNQEEESFYVHHDILLSAYPLSVEWLNFDPSP 246

Query: 242 GGERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENS 301
               GN+IAVG+M P IE+WDLDI+D ++P   LG    K  KKKKKKGKK+S       
Sbjct: 247 DASTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLG---SKLSKKKKKKGKKSS---SAEG 306

Query: 302 HTDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQV 361
           HTD+VL L+WNK  RN+LASASAD  V +WD+S G+    +  HTDKVQ + ++   +Q 
Sbjct: 307 HTDAVLDLSWNKTVRNVLASASADSTVVLWDLSVGKSVARLTAHTDKVQTLQFHPFEAQT 366

Query: 362 LLSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRN 421
           L+SGS+D SV L D R+PS +  +W+ +  +E + W+  +   F+ S +DG V   D R+
Sbjct: 367 LISGSYDKSVALYDCRDPSQNHRQWRFSGQIERVTWNHFSPCHFLASTDDGFVYNLDARS 426

Query: 422 ATTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVAST 481
                    K  FTL+AH   +  +  +      L T S DK VK+WD+  + PS + S 
Sbjct: 427 --------DKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKFVKIWDILGDRPSLIHSR 470

Query: 482 NLKAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYG 524
           ++K G +F  +   D PF+ A GG K  L VWD  T ++V+  +G
Sbjct: 487 DMKMGVLFCSSCCPDLPFVYAFGGQKEGLRVWDISTVSSVNEAFG 470

[Close]
BLAST of Lsi11G007160 vs. ExPASy Swiss-Prot
Match: Q13610 (Periodic tryptophan protein 1 homolog OS=Homo sapiens OX=9606 GN=PWP1 PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-71
Identity = 179/525 (34.10%), Postives = 266/525 (50.67%), Query Frame = 0 

Query: 2   ISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDAND 61
           ++ V+WV  GV K  PD  +   +E    + ++   L++    SD+E      + G  ++
Sbjct: 7   VTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQEEGGGSDEE------ETGSPSE 66

Query: 62  EEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDE--DDEIELFTSGAGDI 121
           + + +A   A+      +    + +  D  E L E D+D YD+E   D   L  S  G  
Sbjct: 67  DGMQSARTQARPREPLEDGDPEDDRTLDDDE-LAEYDLDKYDEEGDPDAETLGESLLGLT 126

Query: 122 YYPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPF 181
            Y +ND DPY+  KD +  E  ED  IKP+D +I+C  +E +   L+             
Sbjct: 127 VYGSNDQDPYVTLKDTEQYER-EDFLIKPSDNLIVCGRAEQDQCNLEV------------ 186

Query: 182 LSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDC-PLK 241
                                       Y+  + +FY+HHDI++ A+PL   WL+  P  
Sbjct: 187 --------------------------HVYNQEEDSFYVHHDILLSAYPLSVEWLNFDPSP 246

Query: 242 GGERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENS 301
               GN+IAVG+M P IE+WDLDI+D ++P   LG    K  KKKKKKGKK+S       
Sbjct: 247 DDSTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLG---SKLSKKKKKKGKKSS---SAEG 306

Query: 302 HTDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQV 361
           HTD+VL L+WNK  RN+LASASAD  V +WD+S G+   ++  HTDKVQ + ++   +Q 
Sbjct: 307 HTDAVLDLSWNKLIRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQT 366

Query: 362 LLSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRN 421
           L+SGS+D SV L D R+P  S   W+ +  +E + W+  +   F+ S +DG V   D R+
Sbjct: 367 LISGSYDKSVALYDCRSPDESHRMWRFSGQIERVTWNHFSPCHFLASTDDGFVYNLDARS 426

Query: 422 ATTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVAST 481
                    K  FTL+AH   +  +  +      L T S DK VK+WD+  + PS V S 
Sbjct: 427 --------DKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDRPSLVHSR 471

Query: 482 NLKAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYG 524
           ++K G +F  +   D PF+ A GG K  L VWD  T ++V+  +G
Sbjct: 487 DMKMGVLFCSSCCPDLPFIYAFGGQKEGLRVWDISTVSSVNEAFG 471

[Close]
BLAST of Lsi11G007160 vs. ExPASy Swiss-Prot
Match: Q2HJ56 (Periodic tryptophan protein 1 homolog OS=Bos taurus OX=9913 GN=PWP1 PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.5e-71
Identity = 179/525 (34.10%), Postives = 268/525 (51.05%), Query Frame = 0 

Query: 2   ISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDAND 61
           ++ V+WV  GV K  PD  +  SKE +  L      + ++ +   +E   ++ + G+ ++
Sbjct: 7   VTCVAWVRCGVAKETPDKVE-LSKEEVKRL------IAEAKEKLQEEGGSDEQETGNPSE 66

Query: 62  EEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDE--DDEIELFTSGAGDI 121
           + + +A   A+      +    + +  D  E L E D+D YD+E   D   L  S  G  
Sbjct: 67  DGMQSARTQARPREPLEDGDPEDDRTLDDDE-LAEYDLDKYDEEGDPDAETLGESLLGLT 126

Query: 122 YYPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPF 181
            Y +ND DPY+  KD +  E  ED  IKP+D +I+C  +E +   L+             
Sbjct: 127 VYGSNDQDPYVTLKDTEQYER-EDFLIKPSDNLIVCGRAEQDQCNLEV------------ 186

Query: 182 LSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDC-PLK 241
                                       Y+  + +FY+HHDI++ A+PL   WL+  P  
Sbjct: 187 --------------------------HVYNQEEDSFYVHHDILLSAYPLSVEWLNFDPSP 246

Query: 242 GGERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENS 301
               GN+IAVG+M P IE+WDLDI+D ++P   LG    K  KKKKKKGKK S     + 
Sbjct: 247 DDSTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLG---SKLSKKKKKKGKKNS---SADG 306

Query: 302 HTDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQV 361
           HTD+VL L+WNK  RN+LASASAD  V +WD+S G+   ++  HTDKVQ + ++   +Q 
Sbjct: 307 HTDAVLDLSWNKLVRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQT 366

Query: 362 LLSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRN 421
           L+SGS+D SV L D R+P  S   W+ +  +E + W+  +   F+ S +DG V   D R+
Sbjct: 367 LISGSYDKSVALYDCRSPEESHRMWRFSGQIERVTWNHFSPCHFLASTDDGFVYNLDARS 426

Query: 422 ATTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVAST 481
                    K  FTL+AH   +  +  +      L T S DK VK+WD+  + PS V S 
Sbjct: 427 --------DKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDRPSLVHSR 470

Query: 482 NLKAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYG 524
           ++K G +F  +   D PF+ A GG K  L VWD  T ++V+  +G
Sbjct: 487 DMKMGVLFCSSCCPDLPFIYAFGGQKEGLRVWDISTVSSVNEAFG 470

[Close]
BLAST of Lsi11G007160 vs. ExPASy Swiss-Prot
Match: P21304 (Periodic tryptophan protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PWP1 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.8e-56
Identity = 176/565 (31.15%), Postives = 277/565 (49.03%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPD--LADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGD 60
           MISA +WVP+G     P+  + D    E I++L + N    D +K + +EA+ E     D
Sbjct: 1   MISATNWVPRGFSSEFPEKYVLDDEEVERINQLAQLN---LDDAKATLEEAEGESGVEDD 60

Query: 61  ANDEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDED-------DEIEL 120
           A             A G S+   KL+ +  DI + LKE +++ YDDE+        ++ +
Sbjct: 61  A-------------ATGSSN---KLKDQL-DIDDDLKEYNLEEYDDEEIADNEGGKDVSM 120

Query: 121 F--TSGAGDIYYPTNDM--DPYLKDKDGDDSEDIEDE-TIKPTDAVILCACSEDNVSALQ 180
           F   S   D+ +   +   DPY+   + +DS++ + E  + P+D ++L A +ED+VS L 
Sbjct: 121 FPGLSNDSDVKFHEGEKGEDPYISLPNQEDSQEEKQELQVYPSDNLVLAARTEDDVSYLD 180

Query: 181 ACGALELIPISPFLSSNQSRKICFSDTYQGLISKQVWICEGYDAG---------DPNFYI 240
                                I   D   G  S  + + EG +A          DP  Y+
Sbjct: 181 ---------------------IYVYDDGAGFHSSDIPVEEGDEADPDVARGLVRDPALYV 240

Query: 241 HHDIIIPAFPLCTAWLDCPL--KGGERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLG-- 300
           HHD+++PAFPLC  WLD  +     E  N+ A+G+ +P IEIW+LD +D+  P  +LG  
Sbjct: 241 HHDLMLPAFPLCVEWLDYKVGSNSEEAANYAAIGTFDPQIEIWNLDCVDKAFPDMILGEP 300

Query: 301 ---GIVEKKKKKKKKKGKKTSVTYKENSHTDSVLGLAWNKEYRNILASASADKQVKIWDV 360
               +V  K KKKKKK K   +T     HTD+VL +A NK +R++LAS SAD  VK+WD+
Sbjct: 301 LDNSMVSLKSKKKKKKSKTGHIT---THHTDAVLSMAHNKYFRSVLASTSADHTVKLWDL 360

Query: 361 STGQC--NITMQHHTDKVQAVAWNHHSSQVLLSGSFDHSVVLKDGR--NPSHSGYKWQVT 420
           ++G    ++   H    V +  W+  +  +LL+G +D  V L D R  + S     W   
Sbjct: 361 NSGNAARSLASIHSNKNVSSSEWHMLNGSILLTGGYDSRVALTDVRISDESQMSKYWSAM 420

Query: 421 ADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNATTETSSESKASFTLHAHEKAVCSVSYN 480
           A  E       +E++ +   + G V  FDIRN     +   K  +TL AH+  + ++  N
Sbjct: 421 AGEEIETVTFASENIILCGTDSGNVYSFDIRN-----NENRKPVWTLKAHDAGISTLCSN 480

Query: 481 PLAPNLLATGST-DKMVKLW-----DLSNNE-PSCVASTNLKAGAVFSVAFAEDCPF--L 523
              P +++TG+  +K VKLW     D +N + PS V S +   G V + +FA D      
Sbjct: 481 KFIPGMMSTGAMGEKTVKLWKFPLDDATNTKGPSMVLSRDFDVGNVLTSSFAPDIEVAGT 516

[Close]
BLAST of Lsi11G007160 vs. ExPASy TrEMBL
Match: A0A1S3BUS3 (periodic tryptophan protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103493411 PE=4 SV=1)

HSP 1 Score: 924.9 bits (2389), Expect = 1.6e-265
Identity = 465/530 (87.74%), Postives = 482/530 (90.94%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDAN 60
           MISAVSWVPKGVCKP+PDLADPPS+E IDELLKS+ V+EDSSKHSDDEADEEDMDV D +
Sbjct: 1   MISAVSWVPKGVCKPVPDLADPPSQEIIDELLKSSQVVEDSSKHSDDEADEEDMDVEDPS 60

Query: 61  DEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDIY 120
           DEEIANALAVAQALGKSSE T LETKYDDIAEGLKELDMDNYD+EDDEIELFTSGAGD+Y
Sbjct: 61  DEEIANALAVAQALGKSSETTNLETKYDDIAEGLKELDMDNYDNEDDEIELFTSGAGDVY 120

Query: 121 YPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPFL 180
           YP+NDMDPYLKDKDGDDSEDIEDETIKPTDAVI+CACSEDNVSAL               
Sbjct: 121 YPSNDMDPYLKDKDGDDSEDIEDETIKPTDAVIICACSEDNVSAL--------------- 180

Query: 181 SSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKGG 240
                               QVW+CEGYDAGDPNFYIH DIIIPAFPLCTAWLDCPLKGG
Sbjct: 181 --------------------QVWVCEGYDAGDPNFYIHRDIIIPAFPLCTAWLDCPLKGG 240

Query: 241 ERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSHT 300
           ERGNFIAVGSMEP+IEIWDLDIIDEVQPCAVLGGIVE  KKKKKKKGKKTSVTYKENSHT
Sbjct: 241 ERGNFIAVGSMEPSIEIWDLDIIDEVQPCAVLGGIVE--KKKKKKKGKKTSVTYKENSHT 300

Query: 301 DSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVLL 360
           DSVLGLAWNKE+RNILASASADKQVKIWDV TGQCNITMQHHTDKVQAVAWNHHSSQVLL
Sbjct: 301 DSVLGLAWNKEFRNILASASADKQVKIWDVCTGQCNITMQHHTDKVQAVAWNHHSSQVLL 360

Query: 361 SGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNAT 420
           SGSFDHSV LKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNAT
Sbjct: 361 SGSFDHSVALKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNAT 420

Query: 421 TETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTNL 480
           TETSSE+KASFTLHAHEKAVCSVSY+P APNLLATGSTDKMVKLWDLSNNEPSCVASTN 
Sbjct: 421 TETSSETKASFTLHAHEKAVCSVSYSPSAPNLLATGSTDKMVKLWDLSNNEPSCVASTNP 480

Query: 481 KAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQRRS 531
           KAGAVFSV+F+EDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQ+RS
Sbjct: 481 KAGAVFSVSFSEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQQRS 493

[Close]
BLAST of Lsi11G007160 vs. ExPASy TrEMBL
Match: A0A0A0LH54 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G047770 PE=4 SV=1)

HSP 1 Score: 916.0 bits (2366), Expect = 7.2e-263
Identity = 461/530 (86.98%), Postives = 479/530 (90.38%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDAN 60
           MISAVSWVPKGVCKPLPDLADPPS+E ID+LLKSN V+EDSSKHSDDEADEEDMDV DAN
Sbjct: 1   MISAVSWVPKGVCKPLPDLADPPSQETIDQLLKSNQVVEDSSKHSDDEADEEDMDVEDAN 60

Query: 61  DEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDIY 120
           DEEIANALAVAQALGKSSE   LETKYDDIAE LKELDMDNYD+EDDEIELFTSGAGD+Y
Sbjct: 61  DEEIANALAVAQALGKSSETRNLETKYDDIAEELKELDMDNYDNEDDEIELFTSGAGDVY 120

Query: 121 YPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPFL 180
           YP+NDMDPYL+DKDGDDSEDIEDETIKPTDAVI+CACSEDNVSAL               
Sbjct: 121 YPSNDMDPYLQDKDGDDSEDIEDETIKPTDAVIICACSEDNVSAL--------------- 180

Query: 181 SSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKGG 240
                               QVWICEGY  GDPNFYIH DIIIPAFPLCTAWLDCPLKGG
Sbjct: 181 --------------------QVWICEGYGVGDPNFYIHRDIIIPAFPLCTAWLDCPLKGG 240

Query: 241 ERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSHT 300
           ERGNFIAVGSMEP+IEIWDLD+IDEVQPCAVLGGIVE  KKKKKKKGKKTSVTYKENSHT
Sbjct: 241 ERGNFIAVGSMEPSIEIWDLDVIDEVQPCAVLGGIVE--KKKKKKKGKKTSVTYKENSHT 300

Query: 301 DSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVLL 360
           DSVLGLAWNKE+RNILASASADKQVKIWDVSTGQCNITMQHH DKVQAVAWNHHSSQVLL
Sbjct: 301 DSVLGLAWNKEFRNILASASADKQVKIWDVSTGQCNITMQHHIDKVQAVAWNHHSSQVLL 360

Query: 361 SGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNAT 420
           SGSFDHSVVLKDGRNPSHSGYKWQVTADVE+LAWDPHTEHMFVVSLEDGTVKGFDIRNAT
Sbjct: 361 SGSFDHSVVLKDGRNPSHSGYKWQVTADVENLAWDPHTEHMFVVSLEDGTVKGFDIRNAT 420

Query: 421 TETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTNL 480
           TE+SSESKASFTLHAHEKAVCSVSY+P APNLLATGSTDKMVKLWDLSNNEPSC+ASTN 
Sbjct: 421 TESSSESKASFTLHAHEKAVCSVSYSPSAPNLLATGSTDKMVKLWDLSNNEPSCLASTNP 480

Query: 481 KAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQRRS 531
           KAGAVFSV+F+EDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNY Q+RS
Sbjct: 481 KAGAVFSVSFSEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYSQQRS 493

[Close]
BLAST of Lsi11G007160 vs. ExPASy TrEMBL
Match: A0A6J1EZ45 (uncharacterized WD repeat-containing protein C17D11.16 OS=Cucurbita moschata OX=3662 GN=LOC111440869 PE=4 SV=1)

HSP 1 Score: 889.4 bits (2297), Expect = 7.3e-255
Identity = 450/531 (84.75%), Postives = 471/531 (88.70%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVL-EDSSKHSDDEADEEDMDVGDA 60
           MISAVSWVPKGVCKPLP  ADPPSKE IDELLKS  VL EDSSKHS+DE DEEDMDV DA
Sbjct: 1   MISAVSWVPKGVCKPLPVAADPPSKETIDELLKSKDVLEEDSSKHSEDEVDEEDMDVEDA 60

Query: 61  NDEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDI 120
           NDEEIANALAVAQALGKSSE TK ETKYDDIAEGLKELDMD+YDDEDDEIELFTSGAGD+
Sbjct: 61  NDEEIANALAVAQALGKSSETTKSETKYDDIAEGLKELDMDHYDDEDDEIELFTSGAGDL 120

Query: 121 YYPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPF 180
           YY +NDMDPYLKD+  DDSED+EDETIKPTDAVI+CAC+ED+VSALQ C           
Sbjct: 121 YYKSNDMDPYLKDEGDDDSEDLEDETIKPTDAVIVCACNEDDVSALQVC----------- 180

Query: 181 LSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKG 240
                                   ICEGYDAGDPNFYIHH+IIIPAFPLCTAWLDCPLKG
Sbjct: 181 ------------------------ICEGYDAGDPNFYIHHEIIIPAFPLCTAWLDCPLKG 240

Query: 241 GERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSH 300
           GERGNFIAVGSMEPAIEIWDLDI DEVQPC VLGGI EKKKKK KKK KKT +TYKENSH
Sbjct: 241 GERGNFIAVGSMEPAIEIWDLDIRDEVQPCVVLGGIAEKKKKKNKKKEKKTLITYKENSH 300

Query: 301 TDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVL 360
           TDSVLGLAWNKEYRNILASASADKQVKIWDVST +CNITMQHHTDKVQAVAWN+HSSQVL
Sbjct: 301 TDSVLGLAWNKEYRNILASASADKQVKIWDVSTEKCNITMQHHTDKVQAVAWNYHSSQVL 360

Query: 361 LSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA 420
           LSGSFDHSVVLKDGRNPSHSGYKW VTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA
Sbjct: 361 LSGSFDHSVVLKDGRNPSHSGYKWLVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA 420

Query: 421 TTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTN 480
           TTETSSESKASFTLHAHEKAVCSV+YNP APNLLATGSTDKMVKLWDLSNNEPSCVASTN
Sbjct: 421 TTETSSESKASFTLHAHEKAVCSVAYNPAAPNLLATGSTDKMVKLWDLSNNEPSCVASTN 480

Query: 481 LKAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQRRS 531
            KAGAVFS++F+EDCPFL+AIGGSKGKLEVWDTL+DAAVSRK+GNYRQ +S
Sbjct: 481 PKAGAVFSLSFSEDCPFLMAIGGSKGKLEVWDTLSDAAVSRKFGNYRQPKS 496

[Close]
BLAST of Lsi11G007160 vs. ExPASy TrEMBL
Match: A0A6J1KY07 (uncharacterized WD repeat-containing protein C17D11.16 OS=Cucurbita maxima OX=3661 GN=LOC111499760 PE=4 SV=1)

HSP 1 Score: 888.3 bits (2294), Expect = 1.6e-254
Identity = 449/531 (84.56%), Postives = 471/531 (88.70%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVL-EDSSKHSDDEADEEDMDVGDA 60
           MISAVSWVPKGVCKPLP  ADPPSKE IDELLKS  VL EDSSKHS+DE D+EDMDV DA
Sbjct: 1   MISAVSWVPKGVCKPLPVAADPPSKETIDELLKSKDVLEEDSSKHSEDEVDKEDMDVEDA 60

Query: 61  NDEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDI 120
           NDEEIANALAVAQALGKSS+ T  ETKYDDIAEGLKELDMD+YDDEDDEIELFTSGAGD+
Sbjct: 61  NDEEIANALAVAQALGKSSKTTMSETKYDDIAEGLKELDMDHYDDEDDEIELFTSGAGDL 120

Query: 121 YYPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPF 180
           YY +NDMDPYLKDKD DDSED+EDETIKPTDAVI+CAC+ED+VSALQ C           
Sbjct: 121 YYKSNDMDPYLKDKDDDDSEDLEDETIKPTDAVIVCACNEDDVSALQVC----------- 180

Query: 181 LSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKG 240
                                   ICEGYDAGDPNFYIHH+IIIPAFPLCTAWLDCPLKG
Sbjct: 181 ------------------------ICEGYDAGDPNFYIHHEIIIPAFPLCTAWLDCPLKG 240

Query: 241 GERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSH 300
           GERGNFIAVGSMEPAIEIWDLDI DEVQPC VLGGI EKKKKK KKK KKT +TYKENSH
Sbjct: 241 GERGNFIAVGSMEPAIEIWDLDIRDEVQPCVVLGGIAEKKKKKNKKKEKKTLITYKENSH 300

Query: 301 TDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVL 360
           TDSVLGLAWNKEYRNILASASADKQVKIWDVST +CNITMQHHTDKVQAVAWN+HSSQVL
Sbjct: 301 TDSVLGLAWNKEYRNILASASADKQVKIWDVSTEKCNITMQHHTDKVQAVAWNYHSSQVL 360

Query: 361 LSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA 420
           LSGSFDHSVVLKDGRNPSHSGYKW VTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA
Sbjct: 361 LSGSFDHSVVLKDGRNPSHSGYKWLVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA 420

Query: 421 TTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTN 480
           TTETSSESKASFTLHAHEKAVCSV+YNP APNLLATGSTDKMVKLWDLSNNEPSCVASTN
Sbjct: 421 TTETSSESKASFTLHAHEKAVCSVAYNPAAPNLLATGSTDKMVKLWDLSNNEPSCVASTN 480

Query: 481 LKAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQRRS 531
            KAGAVFS++F+EDCPFL+AIGGSKGKLEVWDTL+DAAVSRK+GNYRQ +S
Sbjct: 481 PKAGAVFSLSFSEDCPFLMAIGGSKGKLEVWDTLSDAAVSRKFGNYRQPKS 496

[Close]
BLAST of Lsi11G007160 vs. ExPASy TrEMBL
Match: A0A6J1C2R2 (uncharacterized WD repeat-containing protein C17D11.16 OS=Momordica charantia OX=3673 GN=LOC111006904 PE=4 SV=1)

HSP 1 Score: 858.6 bits (2217), Expect = 1.4e-245
Identity = 440/534 (82.40%), Postives = 463/534 (86.70%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEAD----EEDMDV 60
           MIS +SWVPKGVCKPLP +ADPPSKE IDE+LKS  VLE+SSKHSDDE D    ++ MDV
Sbjct: 1   MISTISWVPKGVCKPLPVVADPPSKETIDEILKSKDVLEESSKHSDDEIDDAVEDKGMDV 60

Query: 61  GDANDEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGA 120
            D+ DEEIANALAVAQALGKSSE TK ETKYDDIA+GLKELDMDNYDDEDDEIELFTSG 
Sbjct: 61  DDSKDEEIANALAVAQALGKSSESTKSETKYDDIADGLKELDMDNYDDEDDEIELFTSGV 120

Query: 121 GDIYYPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPI 180
           GD+YYP+NDMDPYLKDKD DDSED EDETIKPTDAVI+CAC+ED+VS L           
Sbjct: 121 GDLYYPSNDMDPYLKDKDDDDSED-EDETIKPTDAVIVCACNEDDVSVL----------- 180

Query: 181 SPFLSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCP 240
                                   QV I EGY AG+PN YIHH+IIIPAFPLCTAWLDCP
Sbjct: 181 ------------------------QVRIYEGYGAGEPNLYIHHEIIIPAFPLCTAWLDCP 240

Query: 241 LKGGERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKE 300
           LKGGERGNFIAVGSMEP+IEIWDLDIIDEVQP  VLGGI E   KKKKKKGKKT +TYKE
Sbjct: 241 LKGGERGNFIAVGSMEPSIEIWDLDIIDEVQPSVVLGGIAE---KKKKKKGKKTIITYKE 300

Query: 301 NSHTDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSS 360
           NSHTDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQC+I MQHHTDKVQAVAWNHHS 
Sbjct: 301 NSHTDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCDINMQHHTDKVQAVAWNHHSP 360

Query: 361 QVLLSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDI 420
           QVLLSGSFDHSVVLKDGRNPSHSGYKW VTADVE+LAWDPHTEHMFVVSLEDGTVK FDI
Sbjct: 361 QVLLSGSFDHSVVLKDGRNPSHSGYKWLVTADVENLAWDPHTEHMFVVSLEDGTVKCFDI 420

Query: 421 RNATTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVA 480
           RNATTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVA
Sbjct: 421 RNATTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVA 480

Query: 481 STNLKAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQRRS 531
           STN KAGAVFSV+F+EDCPFLLAIGGSKGKLEVWDTL+DAAVSRK+GNYRQ RS
Sbjct: 481 STNPKAGAVFSVSFSEDCPFLLAIGGSKGKLEVWDTLSDAAVSRKFGNYRQPRS 495

[Close]
BLAST of Lsi11G007160 vs. NCBI nr
Match: XP_038890811.1 (uncharacterized WD repeat-containing protein C17D11.16-like [Benincasa hispida] >XP_038890812.1 uncharacterized WD repeat-containing protein C17D11.16-like [Benincasa hispida])

HSP 1 Score: 925.2 bits (2390), Expect = 2.5e-265
Identity = 467/528 (88.45%), Postives = 475/528 (89.96%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDAN 60
           MISAVSWVPKGVCKPLPDLADPPSKE IDELLKS HV++DSSKHSDDEADE DMDV DAN
Sbjct: 1   MISAVSWVPKGVCKPLPDLADPPSKETIDELLKSKHVVDDSSKHSDDEADEGDMDVEDAN 60

Query: 61  DEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDIY 120
           DEEIANALAVAQALGKSSE TK +TKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGD Y
Sbjct: 61  DEEIANALAVAQALGKSSETTKSDTKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDAY 120

Query: 121 YPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPFL 180
           YPTNDMDPYLKD D DDSEDIEDETIKPTDAVI+CACSEDNVSAL               
Sbjct: 121 YPTNDMDPYLKDNDDDDSEDIEDETIKPTDAVIICACSEDNVSAL--------------- 180

Query: 181 SSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKGG 240
                               QVWICEGYDAGDPN YIH DIIIPAFPLCTAWLDCPLKGG
Sbjct: 181 --------------------QVWICEGYDAGDPNIYIHRDIIIPAFPLCTAWLDCPLKGG 240

Query: 241 ERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSHT 300
           ERGNFIAVGSMEP+IEIWDLDIIDEVQPC VLGGIVE   KKKKKKGKKTSVTYKENSHT
Sbjct: 241 ERGNFIAVGSMEPSIEIWDLDIIDEVQPCVVLGGIVE---KKKKKKGKKTSVTYKENSHT 300

Query: 301 DSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVLL 360
           DSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVLL
Sbjct: 301 DSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVLL 360

Query: 361 SGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNAT 420
           SGSFDHSVVLKDGRNPSHSGYKWQVTADVESL WDPHTEHMFVVSLEDGTVKGFDIRNAT
Sbjct: 361 SGSFDHSVVLKDGRNPSHSGYKWQVTADVESLVWDPHTEHMFVVSLEDGTVKGFDIRNAT 420

Query: 421 TETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTNL 480
           TETSSESKASFTLHAHEKAVCSVSYNP APNLLATGSTDKMVKLWDLSNNEPSCVASTNL
Sbjct: 421 TETSSESKASFTLHAHEKAVCSVSYNPSAPNLLATGSTDKMVKLWDLSNNEPSCVASTNL 480

Query: 481 KAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQR 529
           K GAVFSVAF+EDCPFLLAIGGSKGKLEVWDTLTDAAVSRK+GNYR+R
Sbjct: 481 KVGAVFSVAFSEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKFGNYRRR 490

[Close]
BLAST of Lsi11G007160 vs. NCBI nr
Match: XP_008452352.1 (PREDICTED: periodic tryptophan protein 1 homolog [Cucumis melo] >XP_008452356.1 PREDICTED: periodic tryptophan protein 1 homolog [Cucumis melo])

HSP 1 Score: 924.9 bits (2389), Expect = 3.2e-265
Identity = 465/530 (87.74%), Postives = 482/530 (90.94%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDAN 60
           MISAVSWVPKGVCKP+PDLADPPS+E IDELLKS+ V+EDSSKHSDDEADEEDMDV D +
Sbjct: 1   MISAVSWVPKGVCKPVPDLADPPSQEIIDELLKSSQVVEDSSKHSDDEADEEDMDVEDPS 60

Query: 61  DEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDIY 120
           DEEIANALAVAQALGKSSE T LETKYDDIAEGLKELDMDNYD+EDDEIELFTSGAGD+Y
Sbjct: 61  DEEIANALAVAQALGKSSETTNLETKYDDIAEGLKELDMDNYDNEDDEIELFTSGAGDVY 120

Query: 121 YPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPFL 180
           YP+NDMDPYLKDKDGDDSEDIEDETIKPTDAVI+CACSEDNVSAL               
Sbjct: 121 YPSNDMDPYLKDKDGDDSEDIEDETIKPTDAVIICACSEDNVSAL--------------- 180

Query: 181 SSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKGG 240
                               QVW+CEGYDAGDPNFYIH DIIIPAFPLCTAWLDCPLKGG
Sbjct: 181 --------------------QVWVCEGYDAGDPNFYIHRDIIIPAFPLCTAWLDCPLKGG 240

Query: 241 ERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSHT 300
           ERGNFIAVGSMEP+IEIWDLDIIDEVQPCAVLGGIVE  KKKKKKKGKKTSVTYKENSHT
Sbjct: 241 ERGNFIAVGSMEPSIEIWDLDIIDEVQPCAVLGGIVE--KKKKKKKGKKTSVTYKENSHT 300

Query: 301 DSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVLL 360
           DSVLGLAWNKE+RNILASASADKQVKIWDV TGQCNITMQHHTDKVQAVAWNHHSSQVLL
Sbjct: 301 DSVLGLAWNKEFRNILASASADKQVKIWDVCTGQCNITMQHHTDKVQAVAWNHHSSQVLL 360

Query: 361 SGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNAT 420
           SGSFDHSV LKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNAT
Sbjct: 361 SGSFDHSVALKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNAT 420

Query: 421 TETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTNL 480
           TETSSE+KASFTLHAHEKAVCSVSY+P APNLLATGSTDKMVKLWDLSNNEPSCVASTN 
Sbjct: 421 TETSSETKASFTLHAHEKAVCSVSYSPSAPNLLATGSTDKMVKLWDLSNNEPSCVASTNP 480

Query: 481 KAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQRRS 531
           KAGAVFSV+F+EDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQ+RS
Sbjct: 481 KAGAVFSVSFSEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQQRS 493

[Close]
BLAST of Lsi11G007160 vs. NCBI nr
Match: XP_004149077.1 (uncharacterized WD repeat-containing protein C17D11.16 [Cucumis sativus] >KGN61083.1 hypothetical protein Csa_021221 [Cucumis sativus])

HSP 1 Score: 916.0 bits (2366), Expect = 1.5e-262
Identity = 461/530 (86.98%), Postives = 479/530 (90.38%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDAN 60
           MISAVSWVPKGVCKPLPDLADPPS+E ID+LLKSN V+EDSSKHSDDEADEEDMDV DAN
Sbjct: 1   MISAVSWVPKGVCKPLPDLADPPSQETIDQLLKSNQVVEDSSKHSDDEADEEDMDVEDAN 60

Query: 61  DEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDIY 120
           DEEIANALAVAQALGKSSE   LETKYDDIAE LKELDMDNYD+EDDEIELFTSGAGD+Y
Sbjct: 61  DEEIANALAVAQALGKSSETRNLETKYDDIAEELKELDMDNYDNEDDEIELFTSGAGDVY 120

Query: 121 YPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPFL 180
           YP+NDMDPYL+DKDGDDSEDIEDETIKPTDAVI+CACSEDNVSAL               
Sbjct: 121 YPSNDMDPYLQDKDGDDSEDIEDETIKPTDAVIICACSEDNVSAL--------------- 180

Query: 181 SSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKGG 240
                               QVWICEGY  GDPNFYIH DIIIPAFPLCTAWLDCPLKGG
Sbjct: 181 --------------------QVWICEGYGVGDPNFYIHRDIIIPAFPLCTAWLDCPLKGG 240

Query: 241 ERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSHT 300
           ERGNFIAVGSMEP+IEIWDLD+IDEVQPCAVLGGIVE  KKKKKKKGKKTSVTYKENSHT
Sbjct: 241 ERGNFIAVGSMEPSIEIWDLDVIDEVQPCAVLGGIVE--KKKKKKKGKKTSVTYKENSHT 300

Query: 301 DSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVLL 360
           DSVLGLAWNKE+RNILASASADKQVKIWDVSTGQCNITMQHH DKVQAVAWNHHSSQVLL
Sbjct: 301 DSVLGLAWNKEFRNILASASADKQVKIWDVSTGQCNITMQHHIDKVQAVAWNHHSSQVLL 360

Query: 361 SGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNAT 420
           SGSFDHSVVLKDGRNPSHSGYKWQVTADVE+LAWDPHTEHMFVVSLEDGTVKGFDIRNAT
Sbjct: 361 SGSFDHSVVLKDGRNPSHSGYKWQVTADVENLAWDPHTEHMFVVSLEDGTVKGFDIRNAT 420

Query: 421 TETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTNL 480
           TE+SSESKASFTLHAHEKAVCSVSY+P APNLLATGSTDKMVKLWDLSNNEPSC+ASTN 
Sbjct: 421 TESSSESKASFTLHAHEKAVCSVSYSPSAPNLLATGSTDKMVKLWDLSNNEPSCLASTNP 480

Query: 481 KAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQRRS 531
           KAGAVFSV+F+EDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNY Q+RS
Sbjct: 481 KAGAVFSVSFSEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYSQQRS 493

[Close]
BLAST of Lsi11G007160 vs. NCBI nr
Match: XP_023529554.1 (uncharacterized WD repeat-containing protein C17D11.16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 890.6 bits (2300), Expect = 6.7e-255
Identity = 450/531 (84.75%), Postives = 471/531 (88.70%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVL-EDSSKHSDDEADEEDMDVGDA 60
           MISAVSWVPKGVCKPLP  ADPPSKE IDELLKS  VL EDSSKHS+DE DEEDMDV DA
Sbjct: 1   MISAVSWVPKGVCKPLPVAADPPSKETIDELLKSKDVLEEDSSKHSEDEVDEEDMDVEDA 60

Query: 61  NDEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDI 120
           NDEEIANALAVAQALGKSSE TK ETKYDDIAEGLKELDMD+YDDEDDEIELFTSGAGD+
Sbjct: 61  NDEEIANALAVAQALGKSSETTKSETKYDDIAEGLKELDMDHYDDEDDEIELFTSGAGDL 120

Query: 121 YYPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPF 180
           YY +NDMDPYLKD+D DDSED+EDETIKPTDAVI+CAC+ED+VSALQ C           
Sbjct: 121 YYKSNDMDPYLKDEDDDDSEDLEDETIKPTDAVIVCACNEDDVSALQVC----------- 180

Query: 181 LSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKG 240
                                   ICEGYDAGDPNFYIHH+IIIPAFPLCTAWLDCPLKG
Sbjct: 181 ------------------------ICEGYDAGDPNFYIHHEIIIPAFPLCTAWLDCPLKG 240

Query: 241 GERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSH 300
           GERGNFIAVGSMEPAIEIWDLDI DEVQPC VLGGI EKKKKK KKK KKT +TYKENSH
Sbjct: 241 GERGNFIAVGSMEPAIEIWDLDIRDEVQPCVVLGGIAEKKKKKNKKKEKKTLITYKENSH 300

Query: 301 TDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVL 360
           TDSVLGLAWNKEYRNILASASADKQVKIWDVST +CNITMQHHTDKVQAVAWN+HSSQVL
Sbjct: 301 TDSVLGLAWNKEYRNILASASADKQVKIWDVSTEKCNITMQHHTDKVQAVAWNYHSSQVL 360

Query: 361 LSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA 420
           LSGSFDHSVVLKDGRNPSHSGYKW VTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA
Sbjct: 361 LSGSFDHSVVLKDGRNPSHSGYKWLVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA 420

Query: 421 TTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTN 480
           TTETSSESKASFTLHAHEKAVCSV+YNP APNLLATGSTDKMVKLWDLSNNEPSCVASTN
Sbjct: 421 TTETSSESKASFTLHAHEKAVCSVAYNPAAPNLLATGSTDKMVKLWDLSNNEPSCVASTN 480

Query: 481 LKAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQRRS 531
            KAGAVFS++F+EDCPF +AIGGSKGKLEVWDTL+DAAVSRK+GNYRQ +S
Sbjct: 481 PKAGAVFSLSFSEDCPFFMAIGGSKGKLEVWDTLSDAAVSRKFGNYRQPKS 496

[Close]
BLAST of Lsi11G007160 vs. NCBI nr
Match: XP_022933466.1 (uncharacterized WD repeat-containing protein C17D11.16 [Cucurbita moschata] >KAG6587643.1 hypothetical protein SDJN03_16208, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 889.4 bits (2297), Expect = 1.5e-254
Identity = 450/531 (84.75%), Postives = 471/531 (88.70%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVL-EDSSKHSDDEADEEDMDVGDA 60
           MISAVSWVPKGVCKPLP  ADPPSKE IDELLKS  VL EDSSKHS+DE DEEDMDV DA
Sbjct: 1   MISAVSWVPKGVCKPLPVAADPPSKETIDELLKSKDVLEEDSSKHSEDEVDEEDMDVEDA 60

Query: 61  NDEEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDI 120
           NDEEIANALAVAQALGKSSE TK ETKYDDIAEGLKELDMD+YDDEDDEIELFTSGAGD+
Sbjct: 61  NDEEIANALAVAQALGKSSETTKSETKYDDIAEGLKELDMDHYDDEDDEIELFTSGAGDL 120

Query: 121 YYPTNDMDPYLKDKDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPF 180
           YY +NDMDPYLKD+  DDSED+EDETIKPTDAVI+CAC+ED+VSALQ C           
Sbjct: 121 YYKSNDMDPYLKDEGDDDSEDLEDETIKPTDAVIVCACNEDDVSALQVC----------- 180

Query: 181 LSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKG 240
                                   ICEGYDAGDPNFYIHH+IIIPAFPLCTAWLDCPLKG
Sbjct: 181 ------------------------ICEGYDAGDPNFYIHHEIIIPAFPLCTAWLDCPLKG 240

Query: 241 GERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSH 300
           GERGNFIAVGSMEPAIEIWDLDI DEVQPC VLGGI EKKKKK KKK KKT +TYKENSH
Sbjct: 241 GERGNFIAVGSMEPAIEIWDLDIRDEVQPCVVLGGIAEKKKKKNKKKEKKTLITYKENSH 300

Query: 301 TDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVL 360
           TDSVLGLAWNKEYRNILASASADKQVKIWDVST +CNITMQHHTDKVQAVAWN+HSSQVL
Sbjct: 301 TDSVLGLAWNKEYRNILASASADKQVKIWDVSTEKCNITMQHHTDKVQAVAWNYHSSQVL 360

Query: 361 LSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA 420
           LSGSFDHSVVLKDGRNPSHSGYKW VTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA
Sbjct: 361 LSGSFDHSVVLKDGRNPSHSGYKWLVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNA 420

Query: 421 TTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTN 480
           TTETSSESKASFTLHAHEKAVCSV+YNP APNLLATGSTDKMVKLWDLSNNEPSCVASTN
Sbjct: 421 TTETSSESKASFTLHAHEKAVCSVAYNPAAPNLLATGSTDKMVKLWDLSNNEPSCVASTN 480

Query: 481 LKAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYRQRRS 531
            KAGAVFS++F+EDCPFL+AIGGSKGKLEVWDTL+DAAVSRK+GNYRQ +S
Sbjct: 481 PKAGAVFSLSFSEDCPFLMAIGGSKGKLEVWDTLSDAAVSRKFGNYRQPKS 496

[Close]
BLAST of Lsi11G007160 vs. TAIR 10
Match: AT4G18905.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 607.8 bits (1566), Expect = 8.1e-174
Identity = 316/532 (59.40%), Postives = 394/532 (74.06%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDAN 60
           MI+AVSW+PKG  K +PD+A+PPSKE + EL++S     +    ++DE  EE+++     
Sbjct: 1   MITAVSWIPKGNLKAVPDVAEPPSKEELKELIESGAFARNVEGSNEDE--EEEIEEDGEE 60

Query: 61  DEEIANALAVAQALGKSSEITKLET--KYDDIAEGLKELDMDNYDDEDDEIELFTSGAGD 120
             E+ +A AVA+ALGKSS+   + +  + D++++GLKELDMDNYD+EDDEIELF+SG GD
Sbjct: 61  ISEVDHAKAVAEALGKSSKSKAVSSSMEVDEVSQGLKELDMDNYDEEDDEIELFSSGMGD 120

Query: 121 IYYPTNDMDPYLKD-KDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPIS 180
           +YYP+N+MDPYLKD  D DD EDI+D T+KPTD+VI+CA +ED+VS L            
Sbjct: 121 LYYPSNEMDPYLKDVDDEDDEEDIDDTTVKPTDSVIICARNEDDVSHL------------ 180

Query: 181 PFLSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPL 240
                                  +V++ E   +G PN Y+HH IIIP FPLCTAWLDCPL
Sbjct: 181 -----------------------EVYLYE-ESSGSPNMYVHHHIIIPEFPLCTAWLDCPL 240

Query: 241 KGGERGNFIAVGSME-PAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKE 300
           KGGE+GNF+A+GS + P IEIWDLD+ DEV PC  LGGI E+    KKKK KK    +KE
Sbjct: 241 KGGEKGNFVAIGSKDTPTIEIWDLDVRDEVLPCIQLGGI-EEMIVSKKKKSKKQKPKFKE 300

Query: 301 NSHTDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSS 360
            SHT+SVLGLAWNKE+RNILASASADK+VK+WDV+TG C ITM+HHT +VQAVAWNH++ 
Sbjct: 301 GSHTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAP 360

Query: 361 QVLLSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDI 420
           +VLLSGSFD +VV+KDGR PSHSG+KW V +DVESLAWDPH EH FVVSLEDGTVKGFDI
Sbjct: 361 EVLLSGSFDQTVVMKDGRQPSHSGFKWSVMSDVESLAWDPHCEHSFVVSLEDGTVKGFDI 420

Query: 421 RNATTETSSESKASFTL--HAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSC 480
           R A + + S+   ++T+  HA ++ V S+SYN   PNLLATGS DK VKLWDLSNNEPSC
Sbjct: 421 RAAQSGSDSDLNPTYTIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSC 480

Query: 481 VASTNLKAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYR 527
           +A+    AGAVFS++FA D PFLLAIGGSKG+L VWDTL DA V+RKYG+ R
Sbjct: 481 IATHQPNAGAVFSISFAVDNPFLLAIGGSKGELHVWDTLLDANVARKYGSNR 493

[Close]
BLAST of Lsi11G007160 vs. TAIR 10
Match: AT4G18905.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 600.5 bits (1547), Expect = 1.3e-171
Identity = 316/541 (58.41%), Postives = 395/541 (73.01%), Query Frame = 0 

Query: 1   MISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDAN 60
           MI+AVSW+PKG  K +PD+A+PPSKE + EL++S     +    ++DE  EE+++     
Sbjct: 1   MITAVSWIPKGNLKAVPDVAEPPSKEELKELIESGAFARNVEGSNEDE--EEEIEEDGEE 60

Query: 61  DEEIANALAVAQALGKSSEITKLET--KYDDIAEGLKELDMDNYDDEDDEIELFTSGAGD 120
             E+ +A AVA+ALGKSS+   + +  + D++++GLKELDMDNYD+EDDEIELF+SG GD
Sbjct: 61  ISEVDHAKAVAEALGKSSKSKAVSSSMEVDEVSQGLKELDMDNYDEEDDEIELFSSGMGD 120

Query: 121 IYYPTNDMDPYLKD-KDGDDSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPIS 180
           +YYP+N+MDPYLKD  D DD EDI+D T+KPTD+VI+CA +ED+VS L            
Sbjct: 121 LYYPSNEMDPYLKDVDDEDDEEDIDDTTVKPTDSVIICARNEDDVSHL------------ 180

Query: 181 PFLSSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPL 240
                                  +V++ E   +G PN Y+HH IIIP FPLCTAWLDCPL
Sbjct: 181 -----------------------EVYLYE-ESSGSPNMYVHHHIIIPEFPLCTAWLDCPL 240

Query: 241 KGGERGNFIAVGSME-PAIEIWDLDIIDEVQPCAVLGG----IVEKKKKKKKKK-----G 300
           KGGE+GNF+A+GS + P IEIWDLD+ DEV PC  LGG    IV KKKK KK+K      
Sbjct: 241 KGGEKGNFVAIGSKDTPTIEIWDLDVRDEVLPCIQLGGIEEMIVSKKKKSKKQKPVCASN 300

Query: 301 KKTSVTYKENSHTDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQ 360
              S +   +SHT+SVLGLAWNKE+RNILASASADK+VK+WDV+TG C ITM+HHT +VQ
Sbjct: 301 SSISSSSMASSHTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQ 360

Query: 361 AVAWNHHSSQVLLSGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLE 420
           AVAWNH++ +VLLSGSFD +VV+KDGR PSHSG+KW V +DVESLAWDPH EH FVVSLE
Sbjct: 361 AVAWNHYAPEVLLSGSFDQTVVMKDGRQPSHSGFKWSVMSDVESLAWDPHCEHSFVVSLE 420

Query: 421 DGTVKGFDIRNATTETSSESKASFTL--HAHEKAVCSVSYNPLAPNLLATGSTDKMVKLW 480
           DGTVKGFDIR A + + S+   ++T+  HA ++ V S+SYN   PNLLATGS DK VKLW
Sbjct: 421 DGTVKGFDIRAAQSGSDSDLNPTYTIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLW 480

Query: 481 DLSNNEPSCVASTNLKAGAVFSVAFAEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNY 527
           DLSNNEPSC+A+    AGAVFS++FA D PFLLAIGGSKG+L VWDTL DA V+RKYG+ 
Sbjct: 481 DLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGELHVWDTLLDANVARKYGSN 503

[Close]
BLAST of Lsi11G007160 vs. TAIR 10
Match: AT4G18900.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 521.2 bits (1341), Expect = 1.0e-147
Identity = 278/510 (54.51%), Postives = 353/510 (69.22%), Query Frame = 0 

Query: 23  PSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDANDEEIANALAVAQALGKSSEITK 82
           PSKE I+       + +DS K+  ++ +EE+ +  + N  E+A+A AVA+  GKSS+   
Sbjct: 7   PSKEEIE-------MHKDSCKYFSNDTEEEETEDEEENG-EVAHAKAVAEEFGKSSKSKN 66

Query: 83  LETKY---DDIAEGLKELDMDNYDDEDDEIELFTSGAGDIYYPTNDMDPYLKDKDGDDSE 142
           + +     D++AEGLKELDMDNYD+EDD IE+F+SG GD+YY +N+MDPYLK  D  D +
Sbjct: 67  VSSSMELDDEVAEGLKELDMDNYDEEDDGIEIFSSGRGDLYYKSNEMDPYLKRNDDHDDD 126

Query: 143 DIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPFLSSNQSRKICFSDTYQGLIS 202
             +D  I PTD VI+CA ++D                       ++ ++           
Sbjct: 127 SDDDPPILPTDLVIVCAMTDD----------------------KEANRL----------- 186

Query: 203 KQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKGGERGNFIAVGS-MEPAIEIW 262
             V++ E    G PN Y HH  IIPA PLCTAWLDCPLKGGERGNF+AVGS   P IEIW
Sbjct: 187 -DVYVSEDTSHGSPNMYNHHYRIIPAIPLCTAWLDCPLKGGERGNFLAVGSDGTPTIEIW 246

Query: 263 DLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSHTDSVLGLAWNKEYRNILAS 322
           DLD   ++ PC  LGG        + K+G      YK+ SHT SVLGLAWNKE+RNILAS
Sbjct: 247 DLDAWFDMLPCVQLGG--------QNKEG-----NYKQGSHTRSVLGLAWNKEFRNILAS 306

Query: 323 ASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVLLSGSFDHSVVLKDGRNPSH 382
           ASADK+VK+WDV+TG C ITM+HHT +VQAVAWNH++ +VLLSGSFD +VVLKDGR PSH
Sbjct: 307 ASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDGRQPSH 366

Query: 383 SGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNATTETSSESKASFTLHAHEK 442
           SG+KW V +DVESLAWDPH+EH FVVSLEDGTVKGFD+R A+  ++SES  SFT++ H++
Sbjct: 367 SGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQASI-SASESNPSFTINGHDE 426

Query: 443 AVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTNLKAGAVFSVAFAEDCPFLL 502
           A  SVSYN  APNLLATGS D+ VKLWDLSNNEPSC+A+ N  AG +F +AF+ D PFLL
Sbjct: 427 AATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLL 460

Query: 503 AIGGSKGKLEVWDTLTDAAVSRKYGNYRQR 529
           A+GG  G+L++WDTL+D  VS +YG+   R
Sbjct: 487 AMGGVMGELKLWDTLSDTNVSSRYGSREVR 460

[Close]
BLAST of Lsi11G007160 vs. TAIR 10
Match: AT4G35370.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 454.1 bits (1167), Expect = 1.5e-127
Identity = 247/505 (48.91%), Postives = 319/505 (63.17%), Query Frame = 0 

Query: 2   ISAVSWVPKGVCKPLPDLADPPSKEAIDELLKSNHVLEDSSKHSDDEADEEDMDVGDAND 61
           I A+SW+PK   K +P  A+ P                           EE MD  +  +
Sbjct: 3   IVALSWIPKEASKAMPVAAESPCM-------------------------EEKMD-DEIQN 62

Query: 62  EEIANALAVAQALGKSSEITKLETKYDDIAEGLKELDMDNYDDEDDEIELFTSGAGDIYY 121
            ++ +A +VA++ GKS   +   T  D++ + LKELDMDNYD+EDDEIELF+SG G +YY
Sbjct: 63  AQVTHAKSVAKSFGKSKVASSSSTDADEVVKFLKELDMDNYDEEDDEIELFSSGQGHLYY 122

Query: 122 PTNDMDPYLKDKDGD-DSEDIEDETIKPTDAVILCACSEDNVSALQACGALELIPISPFL 181
           P+NDMDPYLKD DGD DSED +D TI+PTD++I+CA  +  V+ L               
Sbjct: 123 PSNDMDPYLKDTDGDYDSEDHDDLTIRPTDSLIICAAIKHEVNYL--------------- 182

Query: 182 SSNQSRKICFSDTYQGLISKQVWICEGYDAGDPNFYIHHDIIIPAFPLCTAWLDCPLKGG 241
                               +V++ E  +    N Y+ +D+II   PLCTAWLDCPLKGG
Sbjct: 183 --------------------EVYVYEESE----NIYLRNDMIISELPLCTAWLDCPLKGG 242

Query: 242 ERGNFIAVGSMEPAIEIWDLDIIDEVQPCAVLGGIVEKKKKKKKKKGKKTSVTYKENSHT 301
            +GNF+A+G+ME +IEIWDLD+   V  CA L                    T  +NSHT
Sbjct: 243 GKGNFVAIGTMESSIEIWDLDL---VCTCATL------------------CTTGTDNSHT 302

Query: 302 DSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITMQHHTDKVQAVAWNHHSSQVLL 361
             V+ LAWNKE+RNI+AS S DK+VK+WDV+TG+C +TM+HH  KV AVAWN+++ +VLL
Sbjct: 303 GPVIDLAWNKEFRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLL 362

Query: 362 SGSFDHSVVLKDGRNPSHSGYKWQVTADVESLAWDPHTEHMFVVSLEDGTVKGFDIRNAT 421
           SGS D +VVLKDGR+PS+SG KW   A VE LAWDPH+EH FVVSL+DGTVKGFD R   
Sbjct: 363 SGSRDRTVVLKDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTR--- 415

Query: 422 TETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLWDLSNNEPSCVASTNL 481
              +S+   SF +HAH+  V S+SYN  APNLLATGS D+ VKLWDLSNN+PS +A+   
Sbjct: 423 ---ASDLSPSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSNNQPSWIATNKP 415

Query: 482 KAGAVFSVAFAEDCPFLLAIGGSKG 506
            AG VFSV+F+ DCPFLLA+GGS+G
Sbjct: 483 NAGEVFSVSFSADCPFLLAVGGSEG 415

[Close]
BLAST of Lsi11G007160 vs. TAIR 10
Match: AT5G58230.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-13
Identity = 54/183 (29.51%), Postives = 87/183 (47.54%), Query Frame = 0 

Query: 295 KENSHTDSVLGLAWNKEYRNILASASADKQVKIWDVSTGQCNITM------QHHTDKVQA 354
           K   H+    GL+W+K  +  L S S D Q+ +WD++    N ++      + H   V+ 
Sbjct: 173 KLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVED 232

Query: 355 VAWNHHSSQVLLSGSFDHSVVLKDGRNPSHSGYKWQVTA---DVESLAWDPHTEHMFVVS 414
           VAW+     +  S   D  +++ D R+PS S     V A   +V  LA++P  E +    
Sbjct: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATG 292

Query: 415 LEDGTVKGFDIRNATTETSSESKASFTLHAHEKAVCSVSYNPLAPNLLATGSTDKMVKLW 469
             D TVK FD+R  +T       A  T  +H++ V  V +NP    +LA+    + + +W
Sbjct: 293 STDKTVKLFDLRKLST-------ALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 348

The following BLAST results are available for this feature:
BLAST of Lsi11G007160 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9P7751.4e-7434.95Uncharacterized WD repeat-containing protein C17D11.16 OS=Schizosaccharomyces po... [more]
Q99LL52.1e-7334.10Periodic tryptophan protein 1 homolog OS=Mus musculus OX=10090 GN=Pwp1 PE=1 SV=1[more]
Q136101.1e-7134.10Periodic tryptophan protein 1 homolog OS=Homo sapiens OX=9606 GN=PWP1 PE=1 SV=1[more]
Q2HJ562.5e-7134.10Periodic tryptophan protein 1 homolog OS=Bos taurus OX=9913 GN=PWP1 PE=2 SV=1[more]
P213041.8e-5631.15Periodic tryptophan protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ... [more]
BLAST of Lsi11G007160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BUS31.6e-26587.74periodic tryptophan protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103493411 PE... [more]
A0A0A0LH547.2e-26386.98WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G... [more]
A0A6J1EZ457.3e-25584.75uncharacterized WD repeat-containing protein C17D11.16 OS=Cucurbita moschata OX=... [more]
A0A6J1KY071.6e-25484.56uncharacterized WD repeat-containing protein C17D11.16 OS=Cucurbita maxima OX=36... [more]
A0A6J1C2R21.4e-24582.40uncharacterized WD repeat-containing protein C17D11.16 OS=Momordica charantia OX... [more]
BLAST of Lsi11G007160 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038890811.12.5e-26588.45uncharacterized WD repeat-containing protein C17D11.16-like [Benincasa hispida] ... [more]
XP_008452352.13.2e-26587.74PREDICTED: periodic tryptophan protein 1 homolog [Cucumis melo] >XP_008452356.1 ... [more]
XP_004149077.11.5e-26286.98uncharacterized WD repeat-containing protein C17D11.16 [Cucumis sativus] >KGN610... [more]
XP_023529554.16.7e-25584.75uncharacterized WD repeat-containing protein C17D11.16 [Cucurbita pepo subsp. pe... [more]
XP_022933466.11.5e-25484.75uncharacterized WD repeat-containing protein C17D11.16 [Cucurbita moschata] >KAG... [more]
BLAST of Lsi11G007160 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G18905.18.1e-17459.40Transducin/WD40 repeat-like superfamily protein [more]
AT4G18905.21.3e-17158.41Transducin/WD40 repeat-like superfamily protein [more]
AT4G18900.11.0e-14754.51Transducin/WD40 repeat-like superfamily protein [more]
AT4G35370.11.5e-12748.91Transducin/WD40 repeat-like superfamily protein [more]
AT5G58230.11.1e-1329.51Transducin/WD40 repeat-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 246..260
score: 27.47
coord: 453..467
score: 39.53
coord: 316..330
score: 41.53
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 376..415
e-value: 1.8
score: 15.3
coord: 332..372
e-value: 7.4E-4
score: 28.8
coord: 471..511
e-value: 0.26
score: 20.4
coord: 287..329
e-value: 2.8E-6
score: 36.9
coord: 426..466
e-value: 4.1E-9
score: 46.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 431..466
e-value: 4.7E-4
score: 20.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 433..475
score: 14.351543
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 296..338
score: 14.251289
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 379..522
e-value: 4.0E-29
score: 103.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 94..378
e-value: 9.8E-26
score: 92.7
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 295..353
e-value: 1.3E-4
score: 22.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..60
NoneNo IPR availablePANTHERPTHR14091:SF4TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEINcoord: 1..166
coord: 200..525
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 296..334
score: 11.207411
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 433..471
score: 11.681953
IPR044285Periodic tryptophan protein 1PANTHERPTHR14091PERIODIC TRYPTOPHAN PROTEIN 1coord: 1..166
coord: 200..525
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 316..330
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 453..467
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 243..518

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G007160.1Lsi11G007160.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006364 rRNA processing
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding