Lsi11G007080 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G007080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Tetratricopeptide repeat protein 1
Location	chr11: 7533205 .. 7536855 (-)
RNA-Seq Expression	Lsi11G007080
Synteny	Lsi11G007080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTCTCACAATTCTATAAACAAAATTAACTCTCTTCTTCTCTCCCTAAAACCCAAAGTCTCAGAACCAAATCATTTCAGAATCTATTCAGAAATTGTGTTGATTCGTGGAGGAAAATGGTTCGGATAGAAATGGAGGAACCCCAGGACGAAGTTCCTAGTCCTCCGGAGGCCTCTGCATCGGCCAAAAAGGCGACGGATTCAAGCAGCGGTCCGTCAACATCTAATGCGAGCAAAAACCCTTCCGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGCGATGAGCATCAAGAGAATCCTGATCAAAATTCAGAACAGGAGGAACGAATTGCCACGCTTAGTGAAGATGAGATTAAAGAGGTTTTTCTTCCCTCCTTTAAGTTTTGTTTATTACTGTTTTTTTGCTTTGCGATTGTTTTCTTTTGCCTTCTGCGATCAGTATTATTGGCGTTGACATTAATGATTCAATTCTTATTGTTTGGTATCCTTTTTAACTTTAAAGTAGTTCGTGTATTGTTTTTCTCCTTCATTAATTTCAAGTTTATTCGATGCTAGGATCATTTACACTGTTGGCAATGTTGGTTCTACATTGAAATATTTGAATGAGAATTGATGAATGCATGAAAATGAATAGTCTTCATATCGCTTTGATCATGATATCAGGGGTAGTTGATTTTGTGTTCTCGTATGCGATAAGGAAAACCCCTTTGAAAGAATTTCGGATTGTATGGGAAATTTAAGTTGTGGACAATATTATGGAGCTAAGGGAACTGTTGACAGTTTATAATTTGTTTAGATCTTGATTTTCCTAGATGGTTGTGATAATTTAAGTGGCCATATGACTTACTGACATGATTCTCTTATAGCTCTATTGTAGATCCCCCCGGGGCCTCTTTTATCTAGAAATAAGTTGGTAGATGGTCATCTAAGCTGTTGAATTTTTTTAATTATCATGACATGTTCATCCTTTATGCGGGCTTACAATTTTTTTGGTTCATTTTTTCTTCGGTCCTTTGTATCTAAATTCATCATCTATTACATATCTTGCAGAAAGCCTTGGCTGAAGCAAATAACGCGAAGTTGGCGGGCAACAAACTATTTGGAGAAGGAAAATATGAGGAGGCTATATTAGAGTATGATCGTGCTTTGAACATTGCTCCGGATATGCCCTCTGCAGTGGAGTTACGGTCCATATGCCATGCTAACCGTGGCGTGTGTTTGCTAAAACTAGTATGTCTTTACTATATCCTAAATTGAAAAAGTTTAGTGTGTTCTCTTGTTTAGATATTTTTCTCCATTTATTCGATGCATTATAACCGTATCTTTAATGACTTTAGAGGGTTATATGCCAACTGGTAGTAATCCATGTGATCTTATGGTAGCACGCTTTATTTCTTCTCAGATGCTTTTGTTAGTCCCAACTCCCATTTTTGTTCATCTTGAGGCTGTTGTGAGTGGCTTCACTAATCACTAACCTAGAAAAATCCCGTTCACAAATGTAGAAACATGAATAAATAATTTTGTGAAGACCTTGATTAATGTGGGGGATATGGTGGGATATGGTGTTGTTTTCATAAATGACGAAACATAACCATTTCTCTCTCCTTTCCCTCTTCTAAATTGGATACATAAGCTTATAAATTTCCTGGAAGTCCAAATTTGAAATTACCTCTCCATGTGAAGGATTTATTTCTGTTATTAGGTGGCCATCTTTTCAGACACAAGTCCTAAGCTCTCTGGAATGTCGCATGAAAATTATGATCCTTCAAAAAGCCAAGGCCTCTAAGATTAATTTGATCTGTTCACATGCCTGAAATTTCTCCTTTACATATCAGTCACTAAACATTATGCATGTCAACTTCTTAGTGTATGCGTCTGAATTTTGCTGCTTGTTCATGAACCTGTAGGATTTTTTTTTTGCAATGTAATTAAACTTATTGTCCTGGCTGATGGATTGAGCTTACCTCACTACAAATGACGAGGTTGTCCATTATGCATACCGTTGCTGGTGTCTTTTGAACTGTTATATCCATTCTCACATCGATGTGGCTGATGGAATAATCAAATTAGGAAAATAACAGTTGTGCATCTGAGCCATGATTCTATTTGGGGAAACTGCACTCTCTGGTTTCATTTTTAGTTACCTCAAAAAAAAAAAAGGTCGTCTTTTGAACTTAATTTGTTAGCTAAACATTATTTTGGTCGGATTGCTTCCTTTTTCAATTAAGAACAAGAGAAATCTTTTCATTGAATTAATGGAAAGATTTTTCAATTGAGATGGGTTGAAACTAGGACTTTCTTGTGAGGTTTTGCTTTATTTCCACATCTATTTTCTTCTCTCCAACAGTATAATATATGTATGCATCACGTACTGATTTTCTTGACCATAATTTTTCCAAGGAAAAATATGATGACACGATCAAAGCATGCTCAAAGGCAATTGAACTGAATCCTGGATATGTCAAAGCTTTGTCTAGAAGAGGAGAGGCTCACGAGAAGCTTGAACACTTTGAGGAGGCCATTAATGGTAAACTTTGCTTTGCTTATAAGTTTTTAATATGGCCAACCTTGACGGCAGTTGTTTTCTTTAGAGCTTTCCAGTATGTTCTGAAGCTGTTGTAATAACCTTCCTTTATTAAATTTTATTTATTAACAGATGGGGTCATGTATATTTTATCTACTTGCAGATATGAAAAAGATATTGGAATTGGATTCATCAAATGACCAGGCTAAGAAGACCATCCGTCGCCTTGAACCGCTAGCCGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATTGGTAGGCCTTTTACTGTTTTAAAACTATTTGTCAGTATCATATTTCATTCATCTTTGTTTTAGAACTTGCTTCGGACCAATGGAAATTAAGGCACGTGCATGTGAAGTAATACCCTTTTTGTCATGAGGGGCAAAGTTTTACGTACATAATCTTTACCATCCAAAAAAAATTTCAAGAAAAAACTTTTAACACCTAATTCTTTTATGTATATTTTTGTTGGTCAATTACCACCTTGCTCCCCTTTCCTGGCTCTGCCTGTGAGTGACCTGTGAATCTACTGCATCTGCATCGACACAGATATTTAGTGCATGAGCAACATTTGAATCTAGACAAGTGAATACACATTGGATATCGGATATCATCAATTACTTCATCTTCTAAGTCGATAGTTTGTTCCCTATTCATGAATTTATAATGCTATATTTCTGTTTGAGCAGGAAAGTTGAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGTATGAGCGTGGACAACTTCAAGGCTGTAAAAGACCCAAATACTGGTTCCTATTCAATTTCATTCCAACGATAGTTTGGCTTTACTCGATTTGTATTTACGAGGACGGTAAGAGGAAAAGTATACAAAAAAAAAATGTTACCTGTATGTACTGAGCATTATTTATTCCTGGATTTAATGATTATAACTGATGGTGGTAGTGTTTAAAGTTTGGGCTATGGTTGGTTTTTCAGATGGCAAATTGCTACTGTTGGATGGTACTTTATTTATTGTTGTTACTTGTTACCTTATGATTGTGGACTCTACATGCAGGCTTTATACTGAGATTTGCTGTTCTACTTTGAAAGCTTCTTGAAAAAA

mRNA sequence

ATCTTCTCACAATTCTATAAACAAAATTAACTCTCTTCTTCTCTCCCTAAAACCCAAAGTCTCAGAACCAAATCATTTCAGAATCTATTCAGAAATTGTGTTGATTCGTGGAGGAAAATGGTTCGGATAGAAATGGAGGAACCCCAGGACGAAGTTCCTAGTCCTCCGGAGGCCTCTGCATCGGCCAAAAAGGCGACGGATTCAAGCAGCGGTCCGTCAACATCTAATGCGAGCAAAAACCCTTCCGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGCGATGAGCATCAAGAGAATCCTGATCAAAATTCAGAACAGGAGGAACGAATTGCCACGCTTAGTGAAGATGAGATTAAAGAGAAAGCCTTGGCTGAAGCAAATAACGCGAAGTTGGCGGGCAACAAACTATTTGGAGAAGGAAAATATGAGGAGGCTATATTAGAGTATGATCGTGCTTTGAACATTGCTCCGGATATGCCCTCTGCAGTGGAGTTACGGTCCATATGCCATGCTAACCGTGGCGTGTGTTTGCTAAAACTAGAAAAATATGATGACACGATCAAAGCATGCTCAAAGGCAATTGAACTGAATCCTGGATATGTCAAAGCTTTGTCTAGAAGAGGAGAGGCTCACGAGAAGCTTGAACACTTTGAGGAGGCCATTAATGATATGAAAAAGATATTGGAATTGGATTCATCAAATGACCAGGCTAAGAAGACCATCCGTCGCCTTGAACCGCTAGCCGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATTGGTAGGCCTTTTACTTATCATATTTCATTCATCTTTGTTTTAGAACTTGCTTCGGACCAATGGAAATTAAGGCACGTGCATGTGAAGAAAGTTGAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGTATGAGCGTGGACAACTTCAAGGCTGTAAAAGACCCAAATACTGGTTCCTATTCAATTTCATTCCAACGATAGTTTGGCTTTACTCGATTTGTATTTACGAGGACGGTAAGAGGAAAAGTATACAAAAAAAAAATGTTACCTGTATGTACTGAGCATTATTTATTCCTGGATTTAATGATTATAACTGATGGTGGTAGTGTTTAAAGTTTGGGCTATGGTTGGTTTTTCAGATGGCAAATTGCTACTGTTGGATGGTACTTTATTTATTGTTGTTACTTGTTACCTTATGATTGTGGACTCTACATGCAGGCTTTATACTGAGATTTGCTGTTCTACTTTGAAAGCTTCTTGAAAAAA

Coding sequence (CDS)

ATGGTTCGGATAGAAATGGAGGAACCCCAGGACGAAGTTCCTAGTCCTCCGGAGGCCTCTGCATCGGCCAAAAAGGCGACGGATTCAAGCAGCGGTCCGTCAACATCTAATGCGAGCAAAAACCCTTCCGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGCGATGAGCATCAAGAGAATCCTGATCAAAATTCAGAACAGGAGGAACGAATTGCCACGCTTAGTGAAGATGAGATTAAAGAGAAAGCCTTGGCTGAAGCAAATAACGCGAAGTTGGCGGGCAACAAACTATTTGGAGAAGGAAAATATGAGGAGGCTATATTAGAGTATGATCGTGCTTTGAACATTGCTCCGGATATGCCCTCTGCAGTGGAGTTACGGTCCATATGCCATGCTAACCGTGGCGTGTGTTTGCTAAAACTAGAAAAATATGATGACACGATCAAAGCATGCTCAAAGGCAATTGAACTGAATCCTGGATATGTCAAAGCTTTGTCTAGAAGAGGAGAGGCTCACGAGAAGCTTGAACACTTTGAGGAGGCCATTAATGATATGAAAAAGATATTGGAATTGGATTCATCAAATGACCAGGCTAAGAAGACCATCCGTCGCCTTGAACCGCTAGCCGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATTGGTAGGCCTTTTACTTATCATATTTCATTCATCTTTGTTTTAGAACTTGCTTCGGACCAATGGAAATTAAGGCACGTGCATGTGAAGAAAGTTGAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGTATGAGCGTGGACAACTTCAAGGCTGTAAAAGACCCAAATACTGGTTCCTATTCAATTTCATTCCAACGATAGTTTGGCTTTACTCGATTTGTATTTACGAGGACGGTAAGAGGAAAAGTATACAAAAAAAAAATGTTACCTGTATGTACTGA

Protein sequence

MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDEHQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNIAPDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLEHFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGRPFTYHISFIFVLELASDQWKLRHVHVKKVERHGQFFVGSFWYERGQLQGCKRPKYWFLFNFIPTIVWLYSICIYEDGKRKSIQKKNVTCMY

Homology

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BLAST of Lsi11G007080 vs. ExPASy Swiss-Prot
Match: Q99614 (Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.3e-19
Identity = 76/220 (34.55%), Postives = 113/220 (51.36%), Query Frame = 0


Query: 13  VPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDEHQENPDQNSEQ- 72
           VP P    + +K   D  +        +        + + E G    E++ N D NS + 
Sbjct: 33  VPDPKNQHSQSKLLRDDEAHLQEDQGEEECFHDCSASFEEEPGADKVENKSNEDVNSSEL 92

Query: 73  -EERIATLSE---DEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNIAPDMPSA 132
            EE +  L +   DE K+K   E+   K  GN+ F +G Y EA   Y RAL + P     
Sbjct: 93  DEEYLIELEKNMSDEEKQKRREESTRLKEEGNEQFKKGDYIEAESSYSRALEMCPS--CF 152

Query: 133 VELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLEHFEEAIN 192
            + RSI  +NR    +K +K +  I  CSKAI+LNP Y++A+ RR E +EK +  +EA+ 
Sbjct: 153 QKERSILFSNRAAARMKQDKKEMAINDCSKAIQLNPSYIRAILRRAELYEKTDKLDEALE 212

Query: 193 DMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           D K ILE D S  QA++   RL    E++ E++KEEM+G+
Sbjct: 213 DYKSILEKDPSIHQAREACMRLPKQIEERNERLKEEMLGK 250

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BLAST of Lsi11G007080 vs. ExPASy Swiss-Prot
Match: Q91Z38 (Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-18
Identity = 63/179 (35.20%), Postives = 97/179 (54.19%), Query Frame = 0


Query: 49  ASDGELGDSGDEHQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYE 108
           ASD    +  +E+    ++N  +EE          K+K   E+   K  GN+ F  G Y 
Sbjct: 84  ASDDSSSELDEEYLIELEKNMPEEE----------KQKRREESAKLKEEGNERFKRGDYM 143

Query: 109 EAILEYDRALNIAPDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKA 168
           EA   Y +AL + P      + RS+  +NR    +K +K +  I  CSKAI+LNP Y++A
Sbjct: 144 EAESSYSQALQMCP--ACFQKDRSVLFSNRAAARMKQDKKETAITDCSKAIQLNPTYIRA 203

Query: 169 LSRRGEAHEKLEHFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           + RR E +EK +  +EA+ D K +LE D S  QA++   RL    E++ E++KEEM+G+
Sbjct: 204 ILRRAELYEKTDKLDEALEDYKSVLEKDPSVHQAREACMRLPKQIEERNERLKEEMLGK 250

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BLAST of Lsi11G007080 vs. ExPASy Swiss-Prot
Match: Q3ZBR5 (Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.3e-16
Identity = 78/238 (32.77%), Postives = 121/238 (50.84%), Query Frame = 0


Query: 4   IEMEEPQD------EVPSPPEASASAKKATDSSSGPSTSNASK----NPSDGYETASDGE 63
           +++ +PQ+       V S  E  + ++   D  + P      +    + S  +ET   G 
Sbjct: 17  LKVTDPQEAECLHPPVSSGKEQHSQSELLKDVDAQPQEDQGEEECFHDASASFETEEPG- 76

Query: 64  LGDSGDEHQENPDQNSE-QEERIATLSE---DEIKEKALAEANNAKLAGNKLFGEGKYEE 123
             D  +   E+    SE  EE +  L +   DE K++   E++  K  GN+ F +G Y E
Sbjct: 77  -ADKLENKPEDDMNPSELDEEYLMELEKNMPDEEKKRRREESSRLKEEGNEQFKKGDYIE 136

Query: 124 AILEYDRALNIAPDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKAL 183
           A   Y RAL   P      + RS+  +NR    +K EK +  I  CSKAI+LNP Y++A+
Sbjct: 137 AESSYTRALQTCPS--CFQKDRSVLFSNRAAARMKQEKKEMAISDCSKAIQLNPSYIRAI 196

Query: 184 SRRGEAHEKLEHFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
            RR E +EK +  +EA+ D K ILE D S  QA++   RL    E++ E++KEEM+G+
Sbjct: 197 LRRAELYEKTDKLDEALEDYKSILEKDPSVHQAREACMRLPKQIEERNERLKEEMLGK 250

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BLAST of Lsi11G007080 vs. ExPASy Swiss-Prot
Match: Q9CZW5 (Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 2.6e-15
Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 0


Query: 79  SEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNIAPDMPSAVELRSICHANR 138
           S D ++  +L  A  AK  GNK F  GKYE+AI  Y  A+++ P   + V+L S  + NR
Sbjct: 105 SGDSLEMSSLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCPTEKN-VDL-STFYQNR 164

Query: 139 GVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLEHFEEAINDMKKILELDS- 198
                +L+K+ +  + C+KA+ELNP YVKAL RR +AHEKL++ +E + D+  +  L+  
Sbjct: 165 AAAFEQLQKWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDNKKECLEDVTAVCILEGF 224

Query: 199 SNDQ----AKKTIRRLEPLAEQKREKMKEEMIGRP 229
            N+Q    A K ++ L     +++ K +E ++  P
Sbjct: 225 QNEQSMLLADKVLKLLGKENAKEKYKNREPLMPSP 257

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BLAST of Lsi11G007080 vs. ExPASy Swiss-Prot
Match: Q75Q39 (Mitochondrial import receptor subunit TOM70 OS=Rattus norvegicus OX=10116 GN=Tomm70 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.6e-15
Identity = 55/155 (35.48%), Postives = 88/155 (56.77%), Query Frame = 0


Query: 79  SEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNIAPDMPSAVELRSICHANR 138
           S D ++  +L  A  AK  GNK F  GKYE+AI  Y  A+++ P   +A    S  + NR
Sbjct: 104 SGDSLEMSSLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCPTEKNAD--LSTFYQNR 163

Query: 139 GVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLEHFEEAINDMKKILELDS- 198
                +L+K+ +  + C+KA+ELNP YVKAL RR +AHEKL++ +E + D+  +  L+  
Sbjct: 164 AAAFEQLQKWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDNKKECLEDVTAVCILEGF 223

Query: 199 SNDQ----AKKTIRRLEPLAEQKREKMKEEMIGRP 229
            N+Q    A K ++ L     +++ K +E ++  P
Sbjct: 224 QNEQSMLLADKVLKLLGKENAKEKYKNREPLMPSP 256

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BLAST of Lsi11G007080 vs. ExPASy TrEMBL
Match: A0A5A7TIE6 (Tetratricopeptide repeat protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00140 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.7e-103
Identity = 208/227 (91.63%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDE 60
           MVRIEMEE QDEVP+PP  SASAK  TDSSSGPSTSNASKNPSDGYETASDGELGDS DE
Sbjct: 1   MVRIEMEEHQDEVPNPPNPSASAKTTTDSSSGPSTSNASKNPSDGYETASDGELGDSADE 60

Query: 61  HQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120
            QENPDQ+SEQEERIAT+SEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI EYDRALNI
Sbjct: 61  CQENPDQHSEQEERIATISEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLE 180
           APD+P AVEL+SIC+ANRG C LKLEKYDDTIKACSKAIELNP YVKALSRRGEAHEKLE
Sbjct: 121 APDVPVAVELQSICNANRGACFLKLEKYDDTIKACSKAIELNPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIG+
Sbjct: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGK 227

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BLAST of Lsi11G007080 vs. ExPASy TrEMBL
Match: A0A0A0LJ51 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036720 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.7e-103
Identity = 208/227 (91.63%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDE 60
           MVRIEMEEP DEVPSPP+ S+S K  TDSSS PSTSNASKNPSDGYETASDGELGDS DE
Sbjct: 1   MVRIEMEEPHDEVPSPPKPSSSVKTTTDSSSVPSTSNASKNPSDGYETASDGELGDSADE 60

Query: 61  HQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120
            QENPDQ+SEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI EYDRALNI
Sbjct: 61  CQENPDQHSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLE 180
           APD+P+AVEL+SICHANRGVC LKLEKY DTIKACSKAIELNP YVKALSRRGEAHEKLE
Sbjct: 121 APDVPAAVELQSICHANRGVCFLKLEKYADTIKACSKAIELNPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIG+
Sbjct: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGK 227

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BLAST of Lsi11G007080 vs. ExPASy TrEMBL
Match: A0A1S3BTU1 (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103493454 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 6.0e-103
Identity = 208/227 (91.63%), Postives = 214/227 (94.27%), Query Frame = 0


Query: 1   MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDE 60
           MVRIEMEE QDEVP+PP  SASAK  TDSSSGPSTSNASKNPSDGYETASDGELGDS DE
Sbjct: 1   MVRIEMEEHQDEVPNPPNPSASAKTTTDSSSGPSTSNASKNPSDGYETASDGELGDSADE 60

Query: 61  HQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120
            QENPDQ+SEQ ERIAT+SEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI EYDRALNI
Sbjct: 61  CQENPDQHSEQGERIATISEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLE 180
           APD+P AVELRSIC+ANRG C LKLEKYDDTIKACSKAIELNP YVKALSRRGEAHEKLE
Sbjct: 121 APDVPVAVELRSICNANRGACFLKLEKYDDTIKACSKAIELNPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIG+
Sbjct: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGK 227

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BLAST of Lsi11G007080 vs. ExPASy TrEMBL
Match: A0A6J1KKL8 (tetratricopeptide repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494007 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 2.3e-99
Identity = 198/227 (87.22%), Postives = 214/227 (94.27%), Query Frame = 0


Query: 1   MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDE 60
           MVRIEMEE +DEVPSPP+ASAS +K TDSS  PSTS+AS+ PSDGYETASDGELGDSGDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGVPSTSSASQEPSDGYETASDGELGDSGDE 60

Query: 61  HQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120
           +Q++P+Q+ E EE+IA LSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI+EYDRALNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLE 180
           APDMPSA ELRSICHANRGVC LKLEKYD+TIKACSKAIE+NP YVKALSRRGEAHEKLE
Sbjct: 121 APDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           HFEEAI+DMKKILELDSSNDQAKK IRRLEPLAEQKREKMKEEMIG+
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGK 227

[Close]

BLAST of Lsi11G007080 vs. ExPASy TrEMBL
Match: A0A6J1G423 (tetratricopeptide repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450555 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 3.1e-99
Identity = 198/227 (87.22%), Postives = 213/227 (93.83%), Query Frame = 0


Query: 1   MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDE 60
           MVRIEMEE +DEVPSPP+ASAS +K TDSS  PSTS+ASK PSDGYETASDGELGDSGDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60

Query: 61  HQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120
           +Q++P+Q+ E EE+IA LSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI+EYDRALNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLE 180
           APDMPSA ELRSICHANRGVC LKLEKYD+TIKACSKAIE+NP YVKALSRRGEAHE LE
Sbjct: 121 APDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHENLE 180

Query: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           HFEEAI+DMKKILELDSSNDQAKK IRRLEPLAEQKREKMKEEMIG+
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGK 227

[Close]

BLAST of Lsi11G007080 vs. NCBI nr
Match: XP_038889502.1 (tetratricopeptide repeat protein 1 [Benincasa hispida])

HSP 1 Score: 400.2 bits (1027), Expect = 1.7e-107
Identity = 215/227 (94.71%), Postives = 221/227 (97.36%), Query Frame = 0


Query: 1   MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDE 60
           MVRIEMEEPQDEVP PP+ASASAKK TDSSSGPSTSNASK+PSDGYETASDGELGDS DE
Sbjct: 1   MVRIEMEEPQDEVPIPPKASASAKKTTDSSSGPSTSNASKDPSDGYETASDGELGDSSDE 60

Query: 61  HQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120
           HQE+ DQ+SEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI
Sbjct: 61  HQEHLDQHSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLE 180
           APDMPSAVELRSICHANRGVC LKLEKYDDTIKACSKAIELNP YVKALSRRGEAHEKLE
Sbjct: 121 APDMPSAVELRSICHANRGVCFLKLEKYDDTIKACSKAIELNPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           HFEEAINDMKKILELDSSNDQA+KTIRRLEPLAEQKREKMKEEMIG+
Sbjct: 181 HFEEAINDMKKILELDSSNDQARKTIRRLEPLAEQKREKMKEEMIGK 227

[Close]

BLAST of Lsi11G007080 vs. NCBI nr
Match: KAA0043100.1 (tetratricopeptide repeat protein 1 [Cucumis melo var. makuwa] >TYJ96388.1 tetratricopeptide repeat protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 385.2 bits (988), Expect = 5.5e-103
Identity = 208/227 (91.63%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDE 60
           MVRIEMEE QDEVP+PP  SASAK  TDSSSGPSTSNASKNPSDGYETASDGELGDS DE
Sbjct: 1   MVRIEMEEHQDEVPNPPNPSASAKTTTDSSSGPSTSNASKNPSDGYETASDGELGDSADE 60

Query: 61  HQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120
            QENPDQ+SEQEERIAT+SEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI EYDRALNI
Sbjct: 61  CQENPDQHSEQEERIATISEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLE 180
           APD+P AVEL+SIC+ANRG C LKLEKYDDTIKACSKAIELNP YVKALSRRGEAHEKLE
Sbjct: 121 APDVPVAVELQSICNANRGACFLKLEKYDDTIKACSKAIELNPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIG+
Sbjct: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGK 227

[Close]

BLAST of Lsi11G007080 vs. NCBI nr
Match: XP_004144712.1 (tetratricopeptide repeat protein 1 [Cucumis sativus] >KGN61074.1 hypothetical protein Csa_021252 [Cucumis sativus])

HSP 1 Score: 385.2 bits (988), Expect = 5.5e-103
Identity = 208/227 (91.63%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDE 60
           MVRIEMEEP DEVPSPP+ S+S K  TDSSS PSTSNASKNPSDGYETASDGELGDS DE
Sbjct: 1   MVRIEMEEPHDEVPSPPKPSSSVKTTTDSSSVPSTSNASKNPSDGYETASDGELGDSADE 60

Query: 61  HQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120
            QENPDQ+SEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI EYDRALNI
Sbjct: 61  CQENPDQHSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLE 180
           APD+P+AVEL+SICHANRGVC LKLEKY DTIKACSKAIELNP YVKALSRRGEAHEKLE
Sbjct: 121 APDVPAAVELQSICHANRGVCFLKLEKYADTIKACSKAIELNPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIG+
Sbjct: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGK 227

[Close]

BLAST of Lsi11G007080 vs. NCBI nr
Match: XP_008452420.1 (PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo])

HSP 1 Score: 384.0 bits (985), Expect = 1.2e-102
Identity = 208/227 (91.63%), Postives = 214/227 (94.27%), Query Frame = 0


Query: 1   MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDE 60
           MVRIEMEE QDEVP+PP  SASAK  TDSSSGPSTSNASKNPSDGYETASDGELGDS DE
Sbjct: 1   MVRIEMEEHQDEVPNPPNPSASAKTTTDSSSGPSTSNASKNPSDGYETASDGELGDSADE 60

Query: 61  HQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120
            QENPDQ+SEQ ERIAT+SEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI EYDRALNI
Sbjct: 61  CQENPDQHSEQGERIATISEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLE 180
           APD+P AVELRSIC+ANRG C LKLEKYDDTIKACSKAIELNP YVKALSRRGEAHEKLE
Sbjct: 121 APDVPVAVELRSICNANRGACFLKLEKYDDTIKACSKAIELNPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIG+
Sbjct: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGK 227

[Close]

BLAST of Lsi11G007080 vs. NCBI nr
Match: XP_023522143.1 (tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo] >XP_023547337.1 tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.2 bits (957), Expect = 2.2e-99
Identity = 199/227 (87.67%), Postives = 214/227 (94.27%), Query Frame = 0


Query: 1   MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDE 60
           MVRIEMEE +DEVPSPP+ASAS +K  DSS  PSTS+ASK PSDGYETASDGELGDSGDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60

Query: 61  HQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120
           +Q++P+Q+ E EE+IA LSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI+EYDRALNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLE 180
           APDMPSAVELRSICHANRGVC LKLEKYD+TIKACSKAIE+NP YVKALSRRGEAHEKLE
Sbjct: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGR 228
           HFEEAI+DMKKILELDSSNDQAKK IRRLEPLAEQKREKMKEEMIG+
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGK 227

[Close]

BLAST of Lsi11G007080 vs. TAIR 10
Match: AT4G30480.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 5.0e-54
Identity = 130/245 (53.06%), Postives = 162/245 (66.12%), Query Frame = 0


Query: 1   MVRIEMEEPQDEV---PSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDS 60
           MV IE  E +DE+     P  AS+S+ + T+      T     + SDG+ETAS+ E+ D 
Sbjct: 1   MVLIESSESEDEILIKNEPKPASSSSPQPTE------TKQVDGDDSDGFETASEREISDE 60

Query: 61  GDEH----------QENPDQNSEQEERIATLSEDEI-------KEKALAEANNAKLAGNK 120
             E           QE P  + ++EE+I  +SE E        KEKALAEAN AK  GNK
Sbjct: 61  EGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGNK 120

Query: 121 LFGEGKYEEAILEYDRALNIAPDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIE 180
           LF  G YEEA+ +Y  AL +  ++P ++ELRSIC+ NRGVC LKL K ++TIK C+KA+E
Sbjct: 121 LFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKALE 180

Query: 181 LNPGYVKALSRRGEAHEKLEHFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKM 226
           LNP Y KAL RR EAHEKLEHFE+A+ D+KKILELD SNDQA+K IRRLEPLA +KREKM
Sbjct: 181 LNPTYNKALVRRAEAHEKLEHFEDAVTDLKKILELDPSNDQARKGIRRLEPLAAEKREKM 239

[Close]

BLAST of Lsi11G007080 vs. TAIR 10
Match: AT4G30480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 8.7e-38
Identity = 99/209 (47.37%), Postives = 129/209 (61.72%), Query Frame = 0


Query: 1   MVRIEMEEPQDEV---PSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDS 60
           MV IE  E +DE+     P  AS+S+ + T+      T     + SDG+ETAS+ E+ D 
Sbjct: 1   MVLIESSESEDEILIKNEPKPASSSSPQPTE------TKQVDGDDSDGFETASEREISDE 60

Query: 61  GDEH----------QENPDQNSEQEERIATLSEDEI-------KEKALAEANNAKLAGNK 120
             E           QE P  + ++EE+I  +SE E        KEKALAEAN AK  GNK
Sbjct: 61  EGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGNK 120

Query: 121 LFGEGKYEEAILEYDRALNIAPDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIE 180
           LF  G YEEA+ +Y  AL +  ++P ++ELRSIC+ NRGVC LKL K ++TIK C+KA+E
Sbjct: 121 LFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKALE 180

Query: 181 LNPGYVKALSRRGEAHEKLEHFEEAINDM 190
           LNP Y KAL RR EAHEKLEHFE+A+  +
Sbjct: 181 LNPTYNKALVRRAEAHEKLEHFEDAVTGL 203

[Close]

BLAST of Lsi11G007080 vs. TAIR 10
Match: AT4G30480.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-20
Identity = 71/165 (43.03%), Postives = 94/165 (56.97%), Query Frame = 0


Query: 1   MVRIEMEEPQDEV---PSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDS 60
           MV IE  E +DE+     P  AS+S+ + T+      T     + SDG+ETAS+ E+ D 
Sbjct: 1   MVLIESSESEDEILIKNEPKPASSSSPQPTE------TKQVDGDDSDGFETASEREISDE 60

Query: 61  GDEH----------QENPDQNSEQEERIATLSEDEI-------KEKALAEANNAKLAGNK 120
             E           QE P  + ++EE+I  +SE E        KEKALAEAN AK  GNK
Sbjct: 61  EGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGNK 120

Query: 121 LFGEGKYEEAILEYDRALNIAPDMPSAVELRSICHANRGVCLLKL 146
           LF  G YEEA+ +Y  AL +  ++P ++ELRSIC+ NRGVC LKL
Sbjct: 121 LFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKL 159

[Close]

BLAST of Lsi11G007080 vs. TAIR 10
Match: AT3G25230.1 (rotamase FKBP 1 )

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-12
Identity = 55/167 (32.93%), Postives = 87/167 (52.10%), Query Frame = 0


Query: 59  DEHQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKL-FGEGKYEEAI--LEYD 118
           D+ +E+ D N+E++   A+  ++E          N+K  G K      +YE+A+  +EYD
Sbjct: 383 DKERESWDMNTEEKIEAASKKKEE---------GNSKFKGGKYSLASKRYEKAVKFIEYD 442

Query: 119 RALNIAPDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEA 178
            + +   +   A  L+  C+ N   C LKL+ Y    K C+K +EL    VKAL RR +A
Sbjct: 443 TSFS-EEEKKQAKALKVACNLNDAACKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQA 502

Query: 179 HEKLEHFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKE 223
           + +L   + A  D+KK LE+D +N + K   +RL       +EKMKE
Sbjct: 503 YMELSDLDLAEFDVKKALEIDPNNREVKLEQKRL-------KEKMKE 532

[Close]

BLAST of Lsi11G007080 vs. TAIR 10
Match: AT3G25230.2 (rotamase FKBP 1 )

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-12
Identity = 55/167 (32.93%), Postives = 87/167 (52.10%), Query Frame = 0


Query: 59  DEHQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKL-FGEGKYEEAI--LEYD 118
           D+ +E+ D N+E++   A+  ++E          N+K  G K      +YE+A+  +EYD
Sbjct: 383 DKERESWDMNTEEKIEAASKKKEE---------GNSKFKGGKYSLASKRYEKAVKFIEYD 442

Query: 119 RALNIAPDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEA 178
            + +   +   A  L+  C+ N   C LKL+ Y    K C+K +EL    VKAL RR +A
Sbjct: 443 TSFS-EEEKKQAKALKVACNLNDAACKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQA 502

Query: 179 HEKLEHFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKE 223
           + +L   + A  D+KK LE+D +N + K   +RL       +EKMKE
Sbjct: 503 YMELSDLDLAEFDVKKALEIDPNNREVKLEQKRL-------KEKMKE 532

The following BLAST results are available for this feature:

BLAST of Lsi11G007080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99614	2.3e-19	34.55	Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1	[more]
Q91Z38	1.5e-18	35.20	Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1	[more]
Q3ZBR5	5.3e-16	32.77	Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1	[more]
Q9CZW5	2.6e-15	36.13	Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 P...	[more]
Q75Q39	2.6e-15	35.48	Mitochondrial import receptor subunit TOM70 OS=Rattus norvegicus OX=10116 GN=Tom...	[more]

BLAST of Lsi11G007080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TIE6	2.7e-103	91.63	Tetratricopeptide repeat protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0LJ51	2.7e-103	91.63	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036720 ...	[more]
A0A1S3BTU1	6.0e-103	91.63	tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103493454 PE=4 ...	[more]
A0A6J1KKL8	2.3e-99	87.22	tetratricopeptide repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494007 P...	[more]
A0A6J1G423	3.1e-99	87.22	tetratricopeptide repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450555...	[more]

BLAST of Lsi11G007080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889502.1	1.7e-107	94.71	tetratricopeptide repeat protein 1 [Benincasa hispida]	[more]
KAA0043100.1	5.5e-103	91.63	tetratricopeptide repeat protein 1 [Cucumis melo var. makuwa] >TYJ96388.1 tetrat...	[more]
XP_004144712.1	5.5e-103	91.63	tetratricopeptide repeat protein 1 [Cucumis sativus] >KGN61074.1 hypothetical pr...	[more]
XP_008452420.1	1.2e-102	91.63	PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo]	[more]
XP_023522143.1	2.2e-99	87.67	tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo] >XP_0235473...	[more]

BLAST of Lsi11G007080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30480.2	5.0e-54	53.06	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30480.1	8.7e-38	47.37	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30480.3	1.6e-20	43.03	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G25230.1	1.6e-12	32.93	rotamase FKBP 1	[more]
AT3G25230.2	1.6e-12	32.93	rotamase FKBP 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 91..124 e-value: 19.0 score: 12.4 coord: 132..165 e-value: 1.1E-6 score: 38.2 coord: 166..199 e-value: 3.0E-4 score: 30.1
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 102..123 e-value: 0.18 score: 12.1
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 91..124 score: 9.3519
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 132..165 score: 8.1719
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 166..199 score: 9.9419
IPR001440	Tetratricopeptide repeat 1	PFAM	PF00515	TPR_1	coord: 134..165 e-value: 4.7E-9 score: 35.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 47..225 e-value: 2.8E-43 score: 149.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 90..218
IPR013105	Tetratricopeptide repeat 2	PFAM	PF07719	TPR_2	coord: 167..198 e-value: 2.0E-5 score: 24.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..74
None	No IPR available	PANTHER	PTHR46014:SF1	TETRATRICOPEPTIDE REPEAT PROTEIN 1	coord: 32..226
None	No IPR available	PANTHER	PTHR46014	TETRATRICOPEPTIDE REPEAT PROTEIN 1	coord: 32..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G007080.1	Lsi11G007080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity