Lsi11G006070 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G006070
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	F-box protein PP2-B15-like
Location	chr11: 6425612 .. 6425935 (+)
RNA-Seq Expression	Lsi11G006070
Synteny	Lsi11G006070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGAATTTCGAGCATCGGAGTGTTGCCGGAGGACTGTGTTTCGGCGATTCTGTCACTCACAACTCCCTCCGACGCCGGGAAATTATCCCTCGTCTCGTCGGCGTTTCGGTCGGCGGCGGAATCAGACGTCGTTTGGGGCAGATTTTTGCCGAAAAACTACGCCGAAATTCTGGCAGCGTCTGAAATCTCCGGCGAGTGTCCATTGAGTTCGAAGAGAGAGGTTTTCTTCCGACTCTGTTCTCCGATACTTCTGGACGGCGGTAAAAAGGTAAATAAAATTTTCAAGTCCGTAAAATTTTTGGGTATTCCATTTTGTTAG

mRNA sequence

ATGGCCGGAATTTCGAGCATCGGAGTGTTGCCGGAGGACTGTGTTTCGGCGATTCTGTCACTCACAACTCCCTCCGACGCCGGGAAATTATCCCTCGTCTCGTCGGCGTTTCGGTCGGCGGCGGAATCAGACGTCGTTTGGGGCAGATTTTTGCCGAAAAACTACGCCGAAATTCTGGCAGCGTCTGAAATCTCCGGCGAGTGTCCATTGAGTTCGAAGAGAGAGGTTTTCTTCCGACTCTGTTCTCCGATACTTCTGGACGGCGGTAAAAAGGTAAATAAAATTTTCAAGTCCGTAAAATTTTTGGGTATTCCATTTTGTTAG

Coding sequence (CDS)

ATGGCCGGAATTTCGAGCATCGGAGTGTTGCCGGAGGACTGTGTTTCGGCGATTCTGTCACTCACAACTCCCTCCGACGCCGGGAAATTATCCCTCGTCTCGTCGGCGTTTCGGTCGGCGGCGGAATCAGACGTCGTTTGGGGCAGATTTTTGCCGAAAAACTACGCCGAAATTCTGGCAGCGTCTGAAATCTCCGGCGAGTGTCCATTGAGTTCGAAGAGAGAGGTTTTCTTCCGACTCTGTTCTCCGATACTTCTGGACGGCGGTAAAAAGGTAAATAAAATTTTCAAGTCCGTAAAATTTTTGGGTATTCCATTTTGTTAG

Protein sequence

MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFKSVKFLGIPFC

Homology

[Close]

BLAST of Lsi11G006070 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.7e-14
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 3   GISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAAS 62
           G S   VLPEDC+S I+S T+P DA   + VS  F SA  SD VW +FLP  Y  +++ S
Sbjct: 57  GTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRS 116

Query: 63  EISGECPLSSKREVFFRLC-SPILLDGGKK 92
            +      +SK+E++F LC +P+L++ GKK
Sbjct: 117 RV-----FASKKELYFALCHNPVLIEDGKK 141

[Close]

BLAST of Lsi11G006070 vs. ExPASy Swiss-Prot
Match: O80494 (F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 3.7e-14
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 9  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGEC 68
          +LPE CV+ ILS TTP+D    + VSS FR A +SD VW +FLP +Y  +++ S      
Sbjct: 2  MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRI 61

Query: 69 PLSSKREVFFRLCSPILLDGGKKVNKIFK 98
            SSK+E++  LC  IL+D G+K+ KI K
Sbjct: 62 -FSSKKELYRCLCESILIDNGRKIFKIEK 89

[Close]

BLAST of Lsi11G006070 vs. ExPASy Swiss-Prot
Match: Q9ZVQ9 (F-box protein PP2-B7 OS=Arabidopsis thaliana OX=3702 GN=PP2B7 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-13
Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 6   SIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEIS 65
           S+G LPE+C+S I+S T+P DA   +LVS  F SA +SD+VW +F+P  Y  +L+ S+  
Sbjct: 39  SLGDLPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLSRSQ-- 98

Query: 66  GECPLSSKREVFFRLC-SPILLDGGKK 92
                SSK+E+FF LC   +L++  KK
Sbjct: 99  ---HFSSKKELFFALCDESVLINVSKK 120

[Close]

BLAST of Lsi11G006070 vs. ExPASy Swiss-Prot
Match: Q9FV02 (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 5.4e-13
Identity = 37/87 (42.53%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 5   SSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEI 64
           S++  LPE C+S I+S T+P DA   + VS  F SA +SD+VW +FLP +Y  ++  S +
Sbjct: 22  STLDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLITPSRV 81

Query: 65  SGECPLSSKREVFFRLCS-PILLDGGK 91
                 SSK+E++F LC+ P+L++ GK
Sbjct: 82  -----FSSKKELYFSLCNDPLLIEDGK 103

[Close]

BLAST of Lsi11G006070 vs. ExPASy Swiss-Prot
Match: Q9C7K0 (F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.4e-13
Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 9  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGEC 68
          +LPE C++ IL+ T+P+DA   S VSS FR A +SD VW +FLP +Y  +++ S      
Sbjct: 3  MLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQS-TDHHW 62

Query: 69 PLSSKREVFFRLCSPILLDGGKKVNKIFK 98
           +SSK+E++  LC  +L+D  +K+ KI K
Sbjct: 63 NISSKKEIYRCLCDSLLIDNARKLFKINK 90

[Close]

BLAST of Lsi11G006070 vs. ExPASy TrEMBL
Match: A0A6J1G450 (F-box protein PP2-B15-like OS=Cucurbita moschata OX=3662 GN=LOC111450571 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.6e-36
Identity = 81/91 (89.01%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
          MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+A
Sbjct: 1  MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSTFRSAAESDVVWSRFLPKNYAEIVA 60

Query: 61 ASEISGECPLSSKREVFFRLCSPILLDGGKK 92
          AS+ISGE PL SKRE FFRLCSPIL++GGKK
Sbjct: 61 ASDISGESPLCSKREAFFRLCSPILIEGGKK 91

[Close]

BLAST of Lsi11G006070 vs. ExPASy TrEMBL
Match: A0A6J1KF36 (F-box protein PP2-B15-like OS=Cucurbita maxima OX=3661 GN=LOC111493739 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.0e-36
Identity = 78/91 (85.71%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
          MAGISSIGVLPEDC+SAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLP+NYAEI+A
Sbjct: 1  MAGISSIGVLPEDCISAILSLTTPTDAGKLSLVSSTFRSAAESDVVWSRFLPRNYAEIMA 60

Query: 61 ASEISGECPLSSKREVFFRLCSPILLDGGKK 92
           S+I+GE PL SKRE FFRLCSPIL+DGGKK
Sbjct: 61 VSDIAGELPLCSKREAFFRLCSPILIDGGKK 91

[Close]

BLAST of Lsi11G006070 vs. ExPASy TrEMBL
Match: A0A6J1KDI1 (F-box protein PP2-B15-like OS=Cucurbita maxima OX=3661 GN=LOC111493914 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.4e-35
Identity = 78/91 (85.71%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
          MAGISSIGVLPEDC+SAIL LTTP+DAGKLSLVSS FRSAAESDVVW RFLP+NYAEI+A
Sbjct: 1  MAGISSIGVLPEDCISAILLLTTPTDAGKLSLVSSTFRSAAESDVVWSRFLPRNYAEIMA 60

Query: 61 ASEISGECPLSSKREVFFRLCSPILLDGGKK 92
          AS+I+GE PL SKRE FFRLCSPIL+DGGKK
Sbjct: 61 ASDIAGELPLCSKREAFFRLCSPILIDGGKK 91

[Close]

BLAST of Lsi11G006070 vs. ExPASy TrEMBL
Match: A0A0A0LLX5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032230 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.8e-35
Identity = 79/91 (86.81%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
          MAGISSIGVLPEDC+SAILSLTTPSDAGKL+LVSS FRSAAESDVVWGRFLP+NY EI+A
Sbjct: 1  MAGISSIGVLPEDCISAILSLTTPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61 ASEISGECPLSSKREVFFRLCSPILLDGGKK 92
          ASE+SGE PL SKRE FFRLCSPIL+D GKK
Sbjct: 61 ASEMSGEAPLRSKREAFFRLCSPILVDEGKK 91

[Close]

BLAST of Lsi11G006070 vs. ExPASy TrEMBL
Match: A0A0A0LJT8 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032730 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.0e-35
Identity = 79/91 (86.81%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
          MAGISSIGVLPEDCVSAILSLT+PSDAGKL+LVSS FRSAAESDVVWGRFLP+NY EI+A
Sbjct: 1  MAGISSIGVLPEDCVSAILSLTSPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61 ASEISGECPLSSKREVFFRLCSPILLDGGKK 92
          ASE+SGE PL SKRE FFRLCSPIL+D GKK
Sbjct: 61 ASEMSGEAPLRSKREAFFRLCSPILVDEGKK 91

[Close]

BLAST of Lsi11G006070 vs. NCBI nr
Match: KAG6599205.1 (F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36
Identity = 82/91 (90.11%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
          MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+A
Sbjct: 1  MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSTFRSAAESDVVWSRFLPKNYAEIVA 60

Query: 61 ASEISGECPLSSKREVFFRLCSPILLDGGKK 92
          AS+ISGE PL SKRE FFRLCSPIL+DGGKK
Sbjct: 61 ASDISGESPLCSKREAFFRLCSPILIDGGKK 91

[Close]

BLAST of Lsi11G006070 vs. NCBI nr
Match: KAG6599216.1 (F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36
Identity = 82/91 (90.11%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
          MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+A
Sbjct: 1  MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSTFRSAAESDVVWSRFLPKNYAEIVA 60

Query: 61 ASEISGECPLSSKREVFFRLCSPILLDGGKK 92
          AS+ISGE PL SKRE FFRLCSPIL+DGGKK
Sbjct: 61 ASDISGESPLCSKREAFFRLCSPILIDGGKK 91

[Close]

BLAST of Lsi11G006070 vs. NCBI nr
Match: KAG7030140.1 (F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36
Identity = 82/91 (90.11%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
          MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+A
Sbjct: 1  MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSTFRSAAESDVVWSRFLPKNYAEIVA 60

Query: 61 ASEISGECPLSSKREVFFRLCSPILLDGGKK 92
          AS+ISGE PL SKRE FFRLCSPIL+DGGKK
Sbjct: 61 ASDISGESPLCSKRETFFRLCSPILIDGGKK 91

[Close]

BLAST of Lsi11G006070 vs. NCBI nr
Match: XP_023545312.1 (F-box protein PP2-B15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.9 bits (411), Expect = 1.5e-36
Identity = 82/91 (90.11%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
          MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+A
Sbjct: 1  MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVA 60

Query: 61 ASEISGECPLSSKREVFFRLCSPILLDGGKK 92
          AS+ISGE PL SKRE FFRLCSPIL+DGGKK
Sbjct: 61 ASDISGESPLCSKREAFFRLCSPILIDGGKK 91

[Close]

BLAST of Lsi11G006070 vs. NCBI nr
Match: XP_022946535.1 (F-box protein PP2-B15-like [Cucurbita moschata])

HSP 1 Score: 161.8 bits (408), Expect = 3.3e-36
Identity = 81/91 (89.01%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
          MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+A
Sbjct: 1  MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSTFRSAAESDVVWSRFLPKNYAEIVA 60

Query: 61 ASEISGECPLSSKREVFFRLCSPILLDGGKK 92
          AS+ISGE PL SKRE FFRLCSPIL++GGKK
Sbjct: 61 ASDISGESPLCSKREAFFRLCSPILIEGGKK 91

[Close]

BLAST of Lsi11G006070 vs. TAIR 10
Match: AT1G09155.1 (phloem protein 2-B15 )

HSP 1 Score: 79.0 bits (193), Expect = 2.7e-15
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 9  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGEC 68
          +LPE CV+ ILS TTP+D    + VSS FR A +SD VW +FLP +Y  +++ S      
Sbjct: 2  MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRI 61

Query: 69 PLSSKREVFFRLCSPILLDGGKKVNKIFK 98
            SSK+E++  LC  IL+D G+K+ KI K
Sbjct: 62 -FSSKKELYRCLCESILIDNGRKIFKIEK 89

[Close]

BLAST of Lsi11G006070 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 79.0 bits (193), Expect = 2.7e-15
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 3   GISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAAS 62
           G S   VLPEDC+S I+S T+P DA   + VS  F SA  SD VW +FLP  Y  +++ S
Sbjct: 57  GTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRS 116

Query: 63  EISGECPLSSKREVFFRLC-SPILLDGGKK 92
            +      +SK+E++F LC +P+L++ GKK
Sbjct: 117 RV-----FASKKELYFALCHNPVLIEDGKK 141

[Close]

BLAST of Lsi11G006070 vs. TAIR 10
Match: AT2G02320.1 (phloem protein 2-B7 )

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-14
Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 6   SIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEIS 65
           S+G LPE+C+S I+S T+P DA   +LVS  F SA +SD+VW +F+P  Y  +L+ S+  
Sbjct: 39  SLGDLPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLSRSQ-- 98

Query: 66  GECPLSSKREVFFRLC-SPILLDGGKK 92
                SSK+E+FF LC   +L++  KK
Sbjct: 99  ---HFSSKKELFFALCDESVLINVSKK 120

[Close]

BLAST of Lsi11G006070 vs. TAIR 10
Match: AT1G56250.1 (phloem protein 2-B14 )

HSP 1 Score: 75.1 bits (183), Expect = 3.8e-14
Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 9  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGEC 68
          +LPE C++ IL+ T+P+DA   S VSS FR A +SD VW +FLP +Y  +++ S      
Sbjct: 3  MLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQS-TDHHW 62

Query: 69 PLSSKREVFFRLCSPILLDGGKKVNKIFK 98
           +SSK+E++  LC  +L+D  +K+ KI K
Sbjct: 63 NISSKKEIYRCLCDSLLIDNARKLFKINK 90

[Close]

BLAST of Lsi11G006070 vs. TAIR 10
Match: AT1G56240.1 (phloem protein 2-B13 )

HSP 1 Score: 74.3 bits (181), Expect = 6.5e-14
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 9  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGEC 68
          +LPE CV+ IL+ T+P+DA   S VSS FR A +SD VW +FLP +Y  +++ S      
Sbjct: 3  MLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRI 62

Query: 69 PLSSKREVFFRLCSPILLDGGKKVNKIFK 98
            SSK+E++  LC  +L+D  +K+ KI K
Sbjct: 63 -FSSKKEIYRCLCDSLLIDNARKLFKINK 90

The following BLAST results are available for this feature:

BLAST of Lsi11G006070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E6P4	3.7e-14	44.44	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
O80494	3.7e-14	46.07	F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2	[more]
Q9ZVQ9	1.9e-13	44.83	F-box protein PP2-B7 OS=Arabidopsis thaliana OX=3702 GN=PP2B7 PE=2 SV=1	[more]
Q9FV02	5.4e-13	42.53	F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2	[more]
Q9C7K0	5.4e-13	42.70	F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1	[more]

BLAST of Lsi11G006070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G450	1.6e-36	89.01	F-box protein PP2-B15-like OS=Cucurbita moschata OX=3662 GN=LOC111450571 PE=4 SV...	[more]
A0A6J1KF36	8.0e-36	85.71	F-box protein PP2-B15-like OS=Cucurbita maxima OX=3661 GN=LOC111493739 PE=4 SV=1	[more]
A0A6J1KDI1	1.4e-35	85.71	F-box protein PP2-B15-like OS=Cucurbita maxima OX=3661 GN=LOC111493914 PE=4 SV=1	[more]
A0A0A0LLX5	1.8e-35	86.81	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032230 PE=4 ...	[more]
A0A0A0LJT8	4.0e-35	86.81	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032730 PE=4 ...	[more]

BLAST of Lsi11G006070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599205.1	1.1e-36	90.11	F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6599216.1	1.1e-36	90.11	F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7030140.1	1.1e-36	90.11	F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023545312.1	1.5e-36	90.11	F-box protein PP2-B15-like [Cucurbita pepo subsp. pepo]	[more]
XP_022946535.1	3.3e-36	89.01	F-box protein PP2-B15-like [Cucurbita moschata]	[more]

BLAST of Lsi11G006070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09155.1	2.7e-15	46.07	phloem protein 2-B15	[more]
AT2G02240.1	2.7e-15	44.44	F-box family protein	[more]
AT2G02320.1	1.3e-14	44.83	phloem protein 2-B7	[more]
AT1G56250.1	3.8e-14	42.70	phloem protein 2-B14	[more]
AT1G56240.1	6.5e-14	43.82	phloem protein 2-B13	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 10..48 e-value: 1.5E-4 score: 21.6
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 4..50 score: 9.02057
None	No IPR available	GENE3D	1.20.1280.50		coord: 2..97 e-value: 2.2E-5 score: 26.3
None	No IPR available	PANTHER	PTHR32278:SF15	F-BOX PROTEIN PP2-B10-LIKE	coord: 9..97
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 9..97
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 3..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G006070.1	Lsi11G006070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding