Lsi11G005440 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G005440
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Microtubule-binding protein TANGLED
Location	chr11: 5671454 .. 5673949 (-)
RNA-Seq Expression	Lsi11G005440
Synteny	Lsi11G005440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTTTTTAGCTCTCTTCATTTTTTTTGGGTGAAACAGTTTTAGAAAGCCATGATGAGAGCAAAGTTTCTATCTTTCATTTCATTGTCTGTGTTTCATTTCAATACATTTTTTCAGCTCAAAGGTTGAAAATTTAAATTCTTCTTCACTTTCTTGTGAAATAAACACTCTGATTTTTGGTTTCCCCTGCTAAAGTTCAGCTTCAATATTTGAAGAATACACAAATGGAGGATTTTTAAACTCAGTTCCCATTAACAAGTACAAGATTGAACAAACTTTTTTAGCTTCTTTTTCATACACAAAAAAACAGTCCCCACTGAACTTCAGCTAGAACTTGCAATCCAATATGTTTTCATTCTATGAAGCTGTAAATGGATGGAAAAATTCTTCTTGTTCTTAGATTTTCGGACTAATTTGCTTTGTCTTATATGTTTATGAAGGTGGAAATGTGCATGAGTAGACTACAAGAACTGCAATTCACAGTAACAGGAGGAAACAAAGTGATTTCTGGGGTGAGCCTTAGCCCACGTAGTACAAGAACCTATCTTAAGACAAGCCTCAGATGTAAACAGGAATCTGTAAGGTATCATTTCTTCCTCATCAATTTTTATTGGTTTTGTGTAAAGTTTAATTTATTATTATATATATTTTTAATTACTGAAATGGGTTCTTCTCTGTTTTCAACTTTGAAGGGTTAAAAATGGTGGAGGCAGGAAATCTCCAGTGGGGAAGTTTCCAGCAAATGCAGGAGGTCTCTTTCTAAACTTATTCATTGAATTTTTCTTCTGTATTCTTGCCTCTTCTTATTGGGTCAGTTTCATGTTTCAAATTTTTCCTTCTTTTAATAAAGTTGATGTCACAATTAATAAAGAATAGCCTTTTTTATATACTGAAAAAAAAATTAGTCCCTCATTGATGTGAATAAGAGAGGTAATATATCGAAATTCTAGCAACCAAAGATTGAATTTTGTAAGAACAATACTTAGTGTATCTAAAGATTGCAGCTGTCTTTTGTAGCTTAAGACAACCACACCGTAGAAAAGCCTAAAAGACTGTTTAAAAAAACCAAAAAGGAAGAAAAAAGGTTTGTTACGAAGCAAACTATGATTGGACGATTGAATGGACTGCAAAAAGATAAGTACAACTAAATTTTACCAAAATATTTTACTTATTTTTTTAACATTCAATATCTTGATTTTGGCACCTGATTTTTTTTCTTCTTCTTTGAATTCACTGTTCACAAATTTGTAGTTTAAGAAAGAATAGGGTAATATAAACAAAATAGGTAATTTGTGAAAACACATGAAAAGAAACTATAATTTTAAAAATAGTTATCCACAATCCACGTGTGTTTTACACTCTTAAGAAGAAACAGAGTTTTGTATTAGAAAGTGAACAAATGATTTTTTTCCACTCATTTTATTTTGTACAGGTGAGTGGAAGAGGATGTCTTTACCAGCAATGCTTGTAGGTGAAACCATTGGGGAAATACTGACTGCAAGTAAGTTTGCAAGAGAGATGGTTGAAGCAGTTACCAATAATAACACCAAAAACACATCAATGGATGACCCGAAAACTCCGTTGACACGACAAAGAAACCGCAAACCAAACATCGACGATTCAGAATTAAGAGCAAGAAGGAAAAGAGAGAAGCAAGAAAAGTTTCAATCAAAACGAACTGAATCACATTCTCCATCACTTCAACGAGTTCGATCCCGAATCAACTTCAAGGTTGTTTCACCTCCAACAAAAAGAGATGTTGTTGATAAAGAGAATGCAAGATATCTGGCGAATCGAGTGTCACCTAGGAACAGGCCGTGGACGAAAAAGACCATACTATTTCCAAACCCTTTATTCCTATCATCAGAGAACTCCTCCCAACAACCAAAGTTTTGCAGAACGAAGTCTCCTGTGATTACAAAAACTAGACAACAAACTCCACATAAGTTCTTAATCAAGTCTCCAGCATCAGCTTCAAAGTTTCAGGTGAAGATCAAGAGCCCACCGGTGGTGATCACACGATCACCTACGAGATCGGTAGTGATCACAAGATCGCCTACGAGACAGGTAAGCTTGAGTAAGCAGTCTCCGAAGAGATCCACTGCCTCCAAGCTGCGTCGGTCGTTTTCACCATCAAGGCTGGTAGCTTCCAAGCTGAGGCAACCATTCTCACCTGCAAGACTTACAGCTTCCAAGCTGAGACAATCATTCTCACCTTCAAGATTGGCTGCTAGGTTGGTGTCTCCCCTGAAAAGCAGAAAAAGTGTACAAAAGTATGATGGGAACATTAATCTGAGTGGTTTGAAACAGAGACCAACCAACATACAGATGAGAATTTGAAGGACAGTTGTTGCTCTAAATAATGATTCTTTTGTTTGATATTTTCTCAATGTCTATAGTGTTTCATTCTTGTGTGTGTGATTGGTTACTCCATTCCATCACATTGCATCATTTTGTGAAAATCAATAAAGAAAGCTGTGGTTCACTTCAAA

mRNA sequence

ATGGTTTTAGAAAGCCATGATGAGAGCAAAGTGGAAATGTGCATGAGTAGACTACAAGAACTGCAATTCACAGTAACAGGAGGAAACAAAGTGATTTCTGGGGTGAGCCTTAGCCCACGTAGTACAAGAACCTATCTTAAGACAAGCCTCAGATGTAAACAGGAATCTGTAAGGGTTAAAAATGGTGGAGGCAGGAAATCTCCAGTGGGGAAGTTTCCAGCAAATGCAGGAGGTGAGTGGAAGAGGATGTCTTTACCAGCAATGCTTGTAGGTGAAACCATTGGGGAAATACTGACTGCAAGTAAGTTTGCAAGAGAGATGGTTGAAGCAGTTACCAATAATAACACCAAAAACACATCAATGGATGACCCGAAAACTCCGTTGACACGACAAAGAAACCGCAAACCAAACATCGACGATTCAGAATTAAGAGCAAGAAGGAAAAGAGAGAAGCAAGAAAAGTTTCAATCAAAACGAACTGAATCACATTCTCCATCACTTCAACGAGTTCGATCCCGAATCAACTTCAAGGTTGTTTCACCTCCAACAAAAAGAGATGTTGTTGATAAAGAGAATGCAAGATATCTGGCGAATCGAGTGTCACCTAGGAACAGGCCGTGGACGAAAAAGACCATACTATTTCCAAACCCTTTATTCCTATCATCAGAGAACTCCTCCCAACAACCAAAGTTTTGCAGAACGAAGTCTCCTGTGATTACAAAAACTAGACAACAAACTCCACATAAGTTCTTAATCAAGTCTCCAGCATCAGCTTCAAAGTTTCAGGTGAAGATCAAGAGCCCACCGGTGGTGATCACACGATCACCTACGAGATCGGTAGTGATCACAAGATCGCCTACGAGACAGGTAAGCTTGAGTAAGCAGTCTCCGAAGAGATCCACTGCCTCCAAGCTGCGTCGGTCGTTTTCACCATCAAGGCTGGTAGCTTCCAAGCTGAGGCAACCATTCTCACCTGCAAGACTTACAGCTTCCAAGCTGAGACAATCATTCTCACCTTCAAGATTGGCTGCTAGGTTGGTGTCTCCCCTGAAAAGCAGAAAAAGTGTACAAAAGTATGATGGGAACATTAATCTGAGTGGTTTGAAACAGAGACCAACCAACATACAGATGAGAATTTGAAGGACAGTTGTTGCTCTAAATAATGATTCTTTTGTTTGATATTTTCTCAATGTCTATAGTGTTTCATTCTTGTGTGTGTGATTGGTTACTCCATTCCATCACATTGCATCATTTTGTGAAAATCAATAAAGAAAGCTGTGGTTCACTTCAAA

Coding sequence (CDS)

ATGGTTTTAGAAAGCCATGATGAGAGCAAAGTGGAAATGTGCATGAGTAGACTACAAGAACTGCAATTCACAGTAACAGGAGGAAACAAAGTGATTTCTGGGGTGAGCCTTAGCCCACGTAGTACAAGAACCTATCTTAAGACAAGCCTCAGATGTAAACAGGAATCTGTAAGGGTTAAAAATGGTGGAGGCAGGAAATCTCCAGTGGGGAAGTTTCCAGCAAATGCAGGAGGTGAGTGGAAGAGGATGTCTTTACCAGCAATGCTTGTAGGTGAAACCATTGGGGAAATACTGACTGCAAGTAAGTTTGCAAGAGAGATGGTTGAAGCAGTTACCAATAATAACACCAAAAACACATCAATGGATGACCCGAAAACTCCGTTGACACGACAAAGAAACCGCAAACCAAACATCGACGATTCAGAATTAAGAGCAAGAAGGAAAAGAGAGAAGCAAGAAAAGTTTCAATCAAAACGAACTGAATCACATTCTCCATCACTTCAACGAGTTCGATCCCGAATCAACTTCAAGGTTGTTTCACCTCCAACAAAAAGAGATGTTGTTGATAAAGAGAATGCAAGATATCTGGCGAATCGAGTGTCACCTAGGAACAGGCCGTGGACGAAAAAGACCATACTATTTCCAAACCCTTTATTCCTATCATCAGAGAACTCCTCCCAACAACCAAAGTTTTGCAGAACGAAGTCTCCTGTGATTACAAAAACTAGACAACAAACTCCACATAAGTTCTTAATCAAGTCTCCAGCATCAGCTTCAAAGTTTCAGGTGAAGATCAAGAGCCCACCGGTGGTGATCACACGATCACCTACGAGATCGGTAGTGATCACAAGATCGCCTACGAGACAGGTAAGCTTGAGTAAGCAGTCTCCGAAGAGATCCACTGCCTCCAAGCTGCGTCGGTCGTTTTCACCATCAAGGCTGGTAGCTTCCAAGCTGAGGCAACCATTCTCACCTGCAAGACTTACAGCTTCCAAGCTGAGACAATCATTCTCACCTTCAAGATTGGCTGCTAGGTTGGTGTCTCCCCTGAAAAGCAGAAAAAGTGTACAAAAGTATGATGGGAACATTAATCTGAGTGGTTTGAAACAGAGACCAACCAACATACAGATGAGAATTTGA

Protein sequence

MVLESHDESKVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSPVGKFPANAGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTKNTSMDDPKTPLTRQRNRKPNIDDSELRARRKREKQEKFQSKRTESHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPVITKTRQQTPHKFLIKSPASASKFQVKIKSPPVVITRSPTRSVVITRSPTRQVSLSKQSPKRSTASKLRRSFSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINLSGLKQRPTNIQMRI

Homology

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BLAST of Lsi11G005440 vs. ExPASy Swiss-Prot
Match: Q197W8 (Microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=TAN PE=1 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 9.6e-89
Identity = 220/447 (49.22%), Postives = 290/447 (64.88%), Query Frame = 0


Query: 9   SKVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSP 68
           +KV+ CM RLQELQ+T+ GG KV+SGV+LSPRSTR YLKTSLRCKQE++R+KN   +KSP
Sbjct: 29  NKVDKCMERLQELQYTIAGGTKVVSGVNLSPRSTRIYLKTSLRCKQETLRIKNATNKKSP 88

Query: 69  VGKFPANAGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTKNTSM------- 128
           VGKFPA++ G+W++MSLPAML+GET+ EIL AS+  R++V+A+    ++ +         
Sbjct: 89  VGKFPASSPGDWRKMSLPAMLLGETVNEILQASQVTRDIVDAIAPKKSRKSRRLTMSQED 148

Query: 129 DDPKTPLTRQRNRKPNID--DSELRARRKREKQEKFQSKRTESHS-PSLQRVRSRINFKV 188
           D PKTP T+Q++R+ N +   S ++ARRK+EK    Q++R+ES S PSLQR RSRI F+ 
Sbjct: 149 DGPKTPETQQKSREQNPETVSSNIKARRKKEK----QNRRSESDSPPSLQRARSRIAFRT 208

Query: 189 VSPPTKRDVVDKENA-RYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSP 248
           +SP  K +  + EN+ R+LANRVSP+++PW KK +LFPNPLF+S   ++QQ KF RT SP
Sbjct: 209 ISPQVKGN--NGENSFRHLANRVSPKHKPWVKKAVLFPNPLFISG-TATQQAKFSRTMSP 268

Query: 249 VIT-------KTRQQTPHKFLIKS-PASASKFQVKIKSPPVVITRSPTR--------SVV 308
           VI        K  ++TP+KFLIKS P SASKFQVKI+SPP V+  SPTR        S  
Sbjct: 269 VIARNEISSIKNNKETPYKFLIKSPPTSASKFQVKIRSPPKVLV-SPTRNGSNSVRKSPR 328

Query: 309 ITRSPTRQVSL-------------SKQSPKRSTASKLRRSFSPSRLVASKLRQ------- 368
            +RSPTR V+L              K+SPK STA+KLRRSF+P+R  ++  R+       
Sbjct: 329 GSRSPTRTVNLGKKSASISPIRNTGKRSPKLSTAAKLRRSFTPTRNGSNLARKSSISPKR 388

Query: 369 ----------------------PFSPARL--------TASKLRQSFSPSRLAARLVSPLK 379
                                   SP R+        TA+K R+SFSPSRLA R VSP+K
Sbjct: 389 VTLQAFLSPTRNGNFCKKSPKASISPTRVCNKSQKLSTAAKFRRSFSPSRLAMRFVSPMK 448

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BLAST of Lsi11G005440 vs. ExPASy Swiss-Prot
Match: Q84M91 (Probable microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=TAN PE=1 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 6.0e-83
Identity = 208/423 (49.17%), Postives = 275/423 (65.01%), Query Frame = 0


Query: 9   SKVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSP 68
           +KV+ CM RLQELQ+T+ GG KV+SGV+LSPRSTR YLKTSLRCKQE++R+KN   +KSP
Sbjct: 29  NKVDKCMERLQELQYTIAGGTKVVSGVNLSPRSTRIYLKTSLRCKQETLRIKNATNKKSP 88

Query: 69  VGKFPANAGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTKNTSM------- 128
           VGKFPA++ G+W++MSLPAML+GET+ EIL AS+  R++V+A+    ++ +         
Sbjct: 89  VGKFPASSPGDWRKMSLPAMLLGETVNEILQASQVTRDIVDAIAPKKSRKSRRLTMSQED 148

Query: 129 DDPKTPLTRQRNRKPNID--DSELRARRKREKQEKFQSKRTESHS-PSLQRVRSRINFKV 188
           D PKTP T+Q++R+ N +   S ++ARRK+EK    Q++R+ES S PSLQR RSRI F+ 
Sbjct: 149 DGPKTPETQQKSREQNPETVSSNIKARRKKEK----QNRRSESDSPPSLQRARSRIAFRT 208

Query: 189 VSPPTKRDVVDKENA-RYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSP 248
           +SP  K +  + EN+ R+LANRVSP+++PW KK +LFPNPLF+S   ++QQ KF RT SP
Sbjct: 209 ISPQVKGN--NGENSFRHLANRVSPKHKPWVKKAVLFPNPLFISG-TATQQAKFSRTMSP 268

Query: 249 VIT-------KTRQQTPHKFLIKS-PASASKFQVKIKSPPVVITRSPTR--------SVV 308
           VI        K  ++TP+KFLIKS P SASKFQVKI+SPP V+  SPTR        S  
Sbjct: 269 VIARNEISSIKNNKETPYKFLIKSPPTSASKFQVKIRSPPKVLV-SPTRNGSNSVRKSPR 328

Query: 309 ITRSPTRQVSL-------------SKQSPKRSTASKLRRSFSPSRLVASKLRQ------- 355
            +RSPTR V+L              K+SPK STA+KLRRSF+P+R  ++  R+       
Sbjct: 329 GSRSPTRTVNLGKKSASISPIRNTGKRSPKLSTAAKLRRSFTPTRNGSNLARKSSISPKR 388

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BLAST of Lsi11G005440 vs. ExPASy Swiss-Prot
Match: Q9FUH9 (Microtubule-binding protein TANGLED1 OS=Zea mays OX=4577 GN=TAN1 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.3e-58
Identity = 170/389 (43.70%), Postives = 219/389 (56.30%), Query Frame = 0


Query: 10  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGG--RKS 69
           KV+ CM+RLQELQ+TV GG KV+SGVSLSPRSTR YL+TSLRCKQE+VR++ G    ++S
Sbjct: 35  KVDRCMARLQELQYTVAGGAKVVSGVSLSPRSTRGYLRTSLRCKQETVRMRGGASAQKRS 94

Query: 70  PVGKFPANAGGE---WKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTKNTSMDDP 129
           P GKF    GGE   W+RMSLPAML+GET+ EI+ AS+FAR++V A        T+ + P
Sbjct: 95  PSGKFGGGVGGEGAQWRRMSLPAMLLGETVLEIVQASQFARDIVTA-----AGATNREPP 154

Query: 130 KTPLTRQRNRKPNI-DDSELRARRKREKQEKFQSKRTE----SHSPSLQRVRSRINFKVV 189
           +TP    R RKP   + + LRARR REKQ       T     +  PS  RVRSRI FK V
Sbjct: 155 RTPKPAPRTRKPAAGEPTPLRARRAREKQSHRGGAATRGADAATPPSRSRVRSRIQFKPV 214

Query: 190 SPPTKRDVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPV- 249
           SP      V        ANRVSP+NRPW KK ++FPNP F +S +++  P  C T SP  
Sbjct: 215 SP------VAVGRPSVSANRVSPKNRPWAKKAVMFPNPTFHASTSAATDP--CATPSPSK 274

Query: 250 ----ITKTR-----QQTPHKFLIKSPASASKFQVKIKSPPVVITRSPTRSVVITRSPTRQ 309
               + KTR     +QTPHKFL+KSP SA   ++++    +               P R 
Sbjct: 275 KQKRLYKTRSPVAARQTPHKFLVKSPPSALGSKLRMHGKAL---------------PARP 334

Query: 310 VSLSKQSPKRSTASKLRRSFSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAARLVSP 369
            ++S   P ++ AS                          A   R SFSPSRLA RL+SP
Sbjct: 335 AAVSPPPPVKAQAS-------------------------PAKTRRCSFSPSRLATRLMSP 370

Query: 370 LKSRKSV-QKYDGNIN-----LSGLKQRP 373
           +K+R S+ +  D  +      +SGLKQRP
Sbjct: 395 IKARLSLGRSRDSGVGVGGGPMSGLKQRP 370

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BLAST of Lsi11G005440 vs. ExPASy TrEMBL
Match: A0A5A7U154 (Microtubule-binding protein TANGLED OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00260 PE=4 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 3.1e-175
Identity = 349/395 (88.35%), Postives = 360/395 (91.14%), Query Frame = 0


Query: 10  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSPV 69
           KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQES+R+KNGGG+KSPV
Sbjct: 25  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESLRIKNGGGKKSPV 84

Query: 70  GKFPANA--GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT-KNTSMDDPKT 129
           GKFP+NA  GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT KNTSMDDPKT
Sbjct: 85  GKFPSNAGGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKT 144

Query: 130 PLTRQRNRKPNIDDSELRARRKREKQEKFQSKRTE-SHSPSLQRVRSRINFKVVSPPTKR 189
           PLTRQRNRKPN++DSELRARRKREKQEKFQS+R E SHSPSLQRVRSRINFKVVSPPTKR
Sbjct: 145 PLTRQRNRKPNLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKR 204

Query: 190 DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPVITKTRQQ 249
           DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSS+NSSQQPKFCRTKSPVI KTRQQ
Sbjct: 205 DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTRQQ 264

Query: 250 TPHKFLIKSPASASKFQVKIKSP-------------------PVVITRSPTRSVVITRSP 309
           TPHKFLIKSP SASKFQVKI  P                   PVVITRSPTR VVITRSP
Sbjct: 265 TPHKFLIKSPVSASKFQVKISPPVVIKRSPTRPVVITRSPTRPVVITRSPTRPVVITRSP 324

Query: 310 TR-QVSLSKQSPKRSTASKLRRSFSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAAR 369
           TR  +S SK SPKRSTASKLRRSFSPSRLVASKLRQPFSPA+LTASKLRQSFSPSRLAAR
Sbjct: 325 TRPMISSSKLSPKRSTASKLRRSFSPSRLVASKLRQPFSPAKLTASKLRQSFSPSRLAAR 384

Query: 370 LVSPLKSRKSVQKYDGNINLSGLKQRP-TNIQMRI 380
           LVSPLKSRKSVQKYDGNIN+SGLKQRP  NIQMRI
Sbjct: 385 LVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 419

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BLAST of Lsi11G005440 vs. ExPASy TrEMBL
Match: A0A5D3D444 (Microtubule-binding protein TANGLED OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00190 PE=4 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 3.1e-175
Identity = 349/395 (88.35%), Postives = 360/395 (91.14%), Query Frame = 0


Query: 10  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSPV 69
           KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQES+R+KNGGG+KSPV
Sbjct: 36  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESLRIKNGGGKKSPV 95

Query: 70  GKFPANA--GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT-KNTSMDDPKT 129
           GKFP+NA  GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT KNTSMDDPKT
Sbjct: 96  GKFPSNAGGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKT 155

Query: 130 PLTRQRNRKPNIDDSELRARRKREKQEKFQSKRTE-SHSPSLQRVRSRINFKVVSPPTKR 189
           PLTRQRNRKPN++DSELRARRKREKQEKFQS+R E SHSPSLQRVRSRINFKVVSPPTKR
Sbjct: 156 PLTRQRNRKPNLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKR 215

Query: 190 DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPVITKTRQQ 249
           DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSS+NSSQQPKFCRTKSPVI KTRQQ
Sbjct: 216 DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTRQQ 275

Query: 250 TPHKFLIKSPASASKFQVKIKSP-------------------PVVITRSPTRSVVITRSP 309
           TPHKFLIKSP SASKFQVKI  P                   PVVITRSPTR VVITRSP
Sbjct: 276 TPHKFLIKSPVSASKFQVKISPPVVIKRSPTRPVVITRSPTRPVVITRSPTRPVVITRSP 335

Query: 310 TR-QVSLSKQSPKRSTASKLRRSFSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAAR 369
           TR  +S SK SPKRSTASKLRRSFSPSRLVASKLRQPFSPA+LTASKLRQSFSPSRLAAR
Sbjct: 336 TRPMISSSKLSPKRSTASKLRRSFSPSRLVASKLRQPFSPAKLTASKLRQSFSPSRLAAR 395

Query: 370 LVSPLKSRKSVQKYDGNINLSGLKQRP-TNIQMRI 380
           LVSPLKSRKSVQKYDGNIN+SGLKQRP  NIQMRI
Sbjct: 396 LVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

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BLAST of Lsi11G005440 vs. ExPASy TrEMBL
Match: A6YTD5 (Microtubule binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 7.7e-174
Identity = 347/395 (87.85%), Postives = 358/395 (90.63%), Query Frame = 0


Query: 10  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSPV 69
           KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQES+R+KNGGG+KSPV
Sbjct: 36  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESIRIKNGGGKKSPV 95

Query: 70  GKFPANA--GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT-KNTSMDDPKT 129
           GKFP+NA  GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT KNTSMDDPKT
Sbjct: 96  GKFPSNAGGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKT 155

Query: 130 PLTRQRNRKPNIDDSELRARRKREKQEKFQSKRTE-SHSPSLQRVRSRINFKVVSPPTKR 189
           PLTRQRNRKPN++DSELRARRKREKQEKFQS+R E SHSPSLQRVRSRINFKVVSPPTKR
Sbjct: 156 PLTRQRNRKPNLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKR 215

Query: 190 DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPVITKTRQQ 249
           DVVDKENA YLANRVSPRNRPWTKKTILFPNPLFLSS+NSSQQPKFCRTKSPVI KTRQQ
Sbjct: 216 DVVDKENAGYLANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTRQQ 275

Query: 250 TPHKFLIKSPASASKFQVKIKSP-------------------PVVITRSPTRSVVITRSP 309
           TPHKFLIKSP SASKFQVKI  P                   PVVITRSPTR VVITRSP
Sbjct: 276 TPHKFLIKSPVSASKFQVKISPPVVIKRSPTRPVVITRSPTRPVVITRSPTRPVVITRSP 335

Query: 310 TR-QVSLSKQSPKRSTASKLRRSFSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAAR 369
           TR  +S SK SPKRSTASKLR SFSPSRLVASKLRQPFSPA+LTASKLRQSFSPSRLAAR
Sbjct: 336 TRPMISSSKLSPKRSTASKLRPSFSPSRLVASKLRQPFSPAKLTASKLRQSFSPSRLAAR 395

Query: 370 LVSPLKSRKSVQKYDGNINLSGLKQRP-TNIQMRI 380
           LVSPLKSRKSVQKYDGNIN+SGLKQRP  NIQMRI
Sbjct: 396 LVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

[Close]

BLAST of Lsi11G005440 vs. ExPASy TrEMBL
Match: A0A1S3BZ63 (microtubule-binding protein TANGLED OS=Cucumis melo OX=3656 GN=LOC103495028 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 7.7e-174
Identity = 347/395 (87.85%), Postives = 358/395 (90.63%), Query Frame = 0


Query: 10  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSPV 69
           KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQES+R+KNGGG+KSPV
Sbjct: 36  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESIRIKNGGGKKSPV 95

Query: 70  GKFPANA--GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT-KNTSMDDPKT 129
           GKFP+NA  GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT KNTSMDDPKT
Sbjct: 96  GKFPSNAGGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKT 155

Query: 130 PLTRQRNRKPNIDDSELRARRKREKQEKFQSKRTE-SHSPSLQRVRSRINFKVVSPPTKR 189
           PLTRQRNRKPN++DSELRARRKREKQEKFQS+R E SHSPSLQRVRSRINFKVVSPPTKR
Sbjct: 156 PLTRQRNRKPNLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKR 215

Query: 190 DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPVITKTRQQ 249
           DVVDKENA YLANRVSPRNRPWTKKTILFPNPLFLSS+NSSQQPKFCRTKSPVI KTRQQ
Sbjct: 216 DVVDKENAGYLANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTRQQ 275

Query: 250 TPHKFLIKSPASASKFQVKIKSP-------------------PVVITRSPTRSVVITRSP 309
           TPHKFLIKSP SASKFQVKI  P                   PVVITRSPTR VVITRSP
Sbjct: 276 TPHKFLIKSPVSASKFQVKISPPVVIKRSPTRPVVITRSPTRPVVITRSPTRPVVITRSP 335

Query: 310 TR-QVSLSKQSPKRSTASKLRRSFSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAAR 369
           TR  +S SK SPKRSTASKLR SFSPSRLVASKLRQPFSPA+LTASKLRQSFSPSRLAAR
Sbjct: 336 TRPMISSSKLSPKRSTASKLRPSFSPSRLVASKLRQPFSPAKLTASKLRQSFSPSRLAAR 395

Query: 370 LVSPLKSRKSVQKYDGNINLSGLKQRP-TNIQMRI 380
           LVSPLKSRKSVQKYDGNIN+SGLKQRP  NIQMRI
Sbjct: 396 LVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

[Close]

BLAST of Lsi11G005440 vs. ExPASy TrEMBL
Match: A0A6J1KAM7 (microtubule-binding protein TANGLED OS=Cucurbita maxima OX=3661 GN=LOC111493748 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.9e-164
Identity = 329/375 (87.73%), Postives = 346/375 (92.27%), Query Frame = 0


Query: 10  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKN-GGGRKSP 69
           KVEMCM RLQELQFTVTGGNKVISGVSLSPRSTR YLKTSLRCKQE++R+KN GGGRKSP
Sbjct: 30  KVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQETLRIKNGGGGRKSP 89

Query: 70  VGKFPANA-GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTKNTSMDDPKTP 129
           VGKFPANA GGEWKRMSLPAMLVGETIGEILTASKFAREM+EAVT  +TK+ SMDDPKTP
Sbjct: 90  VGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMIEAVT-IDTKSMSMDDPKTP 149

Query: 130 LTRQRNRKPNIDDSELRARRKREKQEKFQSKRTESHSPSLQRVRSRINFKVVSPPTKRDV 189
           LTRQRNR+P ++DSELR RRKREKQEK QSKRTESHSPSLQRVRSRINFKVVSPPTKRDV
Sbjct: 150 LTRQRNRRPTLEDSELRVRRKREKQEKLQSKRTESHSPSLQRVRSRINFKVVSPPTKRDV 209

Query: 190 VDKENARYLANRVSPRN-RPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPVITKTRQQT 249
           +DKENARYLANRVSPRN RPWTKKTILFPNP+FLSS ++SQQPKFCRTKSPVITKTRQQT
Sbjct: 210 IDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKSPVITKTRQQT 269

Query: 250 PHKFLIKSPASASKFQVKIKSPPVVITRSPTRSVVITRSPTRQVSLSKQS-PKRSTASKL 309
           PHKFLIKSPASASKFQVKI+SPPVVITRSPT+ V+           SKQS PK STASKL
Sbjct: 270 PHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVL----------SSKQSPPKGSTASKL 329

Query: 310 RRSFSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINL 369
           RRSFSPSRL+ SKLRQPFSPARLT SKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINL
Sbjct: 330 RRSFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINL 389

Query: 370 SGLKQRPTN-IQMRI 380
           SGLKQRPTN IQMRI
Sbjct: 390 SGLKQRPTNIIQMRI 393

[Close]

BLAST of Lsi11G005440 vs. NCBI nr
Match: XP_038877022.1 (microtubule-binding protein TANGLED [Benincasa hispida])

HSP 1 Score: 664.5 bits (1713), Expect = 5.6e-187
Identity = 356/371 (95.96%), Postives = 363/371 (97.84%), Query Frame = 0


Query: 10  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSPV 69
           KVEMCM+RLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVR+KNGGGRKSPV
Sbjct: 32  KVEMCMNRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRIKNGGGRKSPV 91

Query: 70  GKFPANAGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTKNTSMDDPKTPL- 129
           GKFPANAGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNN  KNTSMDDPKTPL 
Sbjct: 92  GKFPANAGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNTNKNTSMDDPKTPLT 151

Query: 130 TRQRNRKPNIDDSELRARRKREKQEKFQSKRTESHSPSLQRVRSRINFKVVSPPTKRDVV 189
           TRQRNRKPNI+DSELRARRKREKQEKFQSKRTESHSPSLQRVRSRINFKVVSPPTKRDVV
Sbjct: 152 TRQRNRKPNIEDSELRARRKREKQEKFQSKRTESHSPSLQRVRSRINFKVVSPPTKRDVV 211

Query: 190 DKENARYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPVITKTRQQTPH 249
           DKENARY+ANRVSPRNRPWTKKTILFPNPLFLS++NSSQQPKFCRTKSPVITKTRQQTPH
Sbjct: 212 DKENARYMANRVSPRNRPWTKKTILFPNPLFLSTDNSSQQPKFCRTKSPVITKTRQQTPH 271

Query: 250 KFLIKSPASASKFQVKIKSPPVVITRSPTRSVVITRSPTRQVSLSKQSPKRSTASKLRRS 309
           KFLIKSP SASKFQVKIKSPPVVITRSPTR VVIT SPTRQVSL+KQSPKRS ASKLRRS
Sbjct: 272 KFLIKSPVSASKFQVKIKSPPVVITRSPTRPVVITLSPTRQVSLNKQSPKRSAASKLRRS 331

Query: 310 FSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINLSGL 369
           FSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINLSGL
Sbjct: 332 FSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINLSGL 391

Query: 370 KQRPTNIQMRI 380
           KQRP NIQMRI
Sbjct: 392 KQRPINIQMRI 402

[Close]

BLAST of Lsi11G005440 vs. NCBI nr
Match: TYK18310.1 (microtubule-binding protein TANGLED [Cucumis melo var. makuwa])

HSP 1 Score: 624.4 bits (1609), Expect = 6.4e-175
Identity = 349/395 (88.35%), Postives = 360/395 (91.14%), Query Frame = 0


Query: 10  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSPV 69
           KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQES+R+KNGGG+KSPV
Sbjct: 36  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESLRIKNGGGKKSPV 95

Query: 70  GKFPANA--GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT-KNTSMDDPKT 129
           GKFP+NA  GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT KNTSMDDPKT
Sbjct: 96  GKFPSNAGGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKT 155

Query: 130 PLTRQRNRKPNIDDSELRARRKREKQEKFQSKRTE-SHSPSLQRVRSRINFKVVSPPTKR 189
           PLTRQRNRKPN++DSELRARRKREKQEKFQS+R E SHSPSLQRVRSRINFKVVSPPTKR
Sbjct: 156 PLTRQRNRKPNLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKR 215

Query: 190 DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPVITKTRQQ 249
           DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSS+NSSQQPKFCRTKSPVI KTRQQ
Sbjct: 216 DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTRQQ 275

Query: 250 TPHKFLIKSPASASKFQVKIKSP-------------------PVVITRSPTRSVVITRSP 309
           TPHKFLIKSP SASKFQVKI  P                   PVVITRSPTR VVITRSP
Sbjct: 276 TPHKFLIKSPVSASKFQVKISPPVVIKRSPTRPVVITRSPTRPVVITRSPTRPVVITRSP 335

Query: 310 TR-QVSLSKQSPKRSTASKLRRSFSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAAR 369
           TR  +S SK SPKRSTASKLRRSFSPSRLVASKLRQPFSPA+LTASKLRQSFSPSRLAAR
Sbjct: 336 TRPMISSSKLSPKRSTASKLRRSFSPSRLVASKLRQPFSPAKLTASKLRQSFSPSRLAAR 395

Query: 370 LVSPLKSRKSVQKYDGNINLSGLKQRP-TNIQMRI 380
           LVSPLKSRKSVQKYDGNIN+SGLKQRP  NIQMRI
Sbjct: 396 LVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

[Close]

BLAST of Lsi11G005440 vs. NCBI nr
Match: KAA0047966.1 (microtubule-binding protein TANGLED [Cucumis melo var. makuwa])

HSP 1 Score: 624.4 bits (1609), Expect = 6.4e-175
Identity = 349/395 (88.35%), Postives = 360/395 (91.14%), Query Frame = 0


Query: 10  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSPV 69
           KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQES+R+KNGGG+KSPV
Sbjct: 25  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESLRIKNGGGKKSPV 84

Query: 70  GKFPANA--GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT-KNTSMDDPKT 129
           GKFP+NA  GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT KNTSMDDPKT
Sbjct: 85  GKFPSNAGGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKT 144

Query: 130 PLTRQRNRKPNIDDSELRARRKREKQEKFQSKRTE-SHSPSLQRVRSRINFKVVSPPTKR 189
           PLTRQRNRKPN++DSELRARRKREKQEKFQS+R E SHSPSLQRVRSRINFKVVSPPTKR
Sbjct: 145 PLTRQRNRKPNLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKR 204

Query: 190 DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPVITKTRQQ 249
           DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSS+NSSQQPKFCRTKSPVI KTRQQ
Sbjct: 205 DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTRQQ 264

Query: 250 TPHKFLIKSPASASKFQVKIKSP-------------------PVVITRSPTRSVVITRSP 309
           TPHKFLIKSP SASKFQVKI  P                   PVVITRSPTR VVITRSP
Sbjct: 265 TPHKFLIKSPVSASKFQVKISPPVVIKRSPTRPVVITRSPTRPVVITRSPTRPVVITRSP 324

Query: 310 TR-QVSLSKQSPKRSTASKLRRSFSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAAR 369
           TR  +S SK SPKRSTASKLRRSFSPSRLVASKLRQPFSPA+LTASKLRQSFSPSRLAAR
Sbjct: 325 TRPMISSSKLSPKRSTASKLRRSFSPSRLVASKLRQPFSPAKLTASKLRQSFSPSRLAAR 384

Query: 370 LVSPLKSRKSVQKYDGNINLSGLKQRP-TNIQMRI 380
           LVSPLKSRKSVQKYDGNIN+SGLKQRP  NIQMRI
Sbjct: 385 LVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 419

[Close]

BLAST of Lsi11G005440 vs. NCBI nr
Match: XP_008454676.1 (PREDICTED: microtubule-binding protein TANGLED [Cucumis melo] >ABR67412.1 microtubule binding protein [Cucumis melo subsp. melo])

HSP 1 Score: 619.8 bits (1597), Expect = 1.6e-173
Identity = 347/395 (87.85%), Postives = 358/395 (90.63%), Query Frame = 0


Query: 10  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSPV 69
           KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQES+R+KNGGG+KSPV
Sbjct: 36  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESIRIKNGGGKKSPV 95

Query: 70  GKFPANA--GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT-KNTSMDDPKT 129
           GKFP+NA  GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT KNTSMDDPKT
Sbjct: 96  GKFPSNAGGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKT 155

Query: 130 PLTRQRNRKPNIDDSELRARRKREKQEKFQSKRTE-SHSPSLQRVRSRINFKVVSPPTKR 189
           PLTRQRNRKPN++DSELRARRKREKQEKFQS+R E SHSPSLQRVRSRINFKVVSPPTKR
Sbjct: 156 PLTRQRNRKPNLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKR 215

Query: 190 DVVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPVITKTRQQ 249
           DVVDKENA YLANRVSPRNRPWTKKTILFPNPLFLSS+NSSQQPKFCRTKSPVI KTRQQ
Sbjct: 216 DVVDKENAGYLANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTRQQ 275

Query: 250 TPHKFLIKSPASASKFQVKIKSP-------------------PVVITRSPTRSVVITRSP 309
           TPHKFLIKSP SASKFQVKI  P                   PVVITRSPTR VVITRSP
Sbjct: 276 TPHKFLIKSPVSASKFQVKISPPVVIKRSPTRPVVITRSPTRPVVITRSPTRPVVITRSP 335

Query: 310 TR-QVSLSKQSPKRSTASKLRRSFSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAAR 369
           TR  +S SK SPKRSTASKLR SFSPSRLVASKLRQPFSPA+LTASKLRQSFSPSRLAAR
Sbjct: 336 TRPMISSSKLSPKRSTASKLRPSFSPSRLVASKLRQPFSPAKLTASKLRQSFSPSRLAAR 395

Query: 370 LVSPLKSRKSVQKYDGNINLSGLKQRP-TNIQMRI 380
           LVSPLKSRKSVQKYDGNIN+SGLKQRP  NIQMRI
Sbjct: 396 LVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

[Close]

BLAST of Lsi11G005440 vs. NCBI nr
Match: XP_011648821.1 (microtubule-binding protein TANGLED [Cucumis sativus] >KAE8651599.1 hypothetical protein Csa_023440 [Cucumis sativus])

HSP 1 Score: 612.8 bits (1579), Expect = 1.9e-171
Identity = 345/394 (87.56%), Postives = 357/394 (90.61%), Query Frame = 0


Query: 10  KVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSPV 69
           KVEMCM+RLQELQFTVTGGNKVISGVSLSPRSTR YLKTSLRCKQES+R+KN GG+KSPV
Sbjct: 34  KVEMCMNRLQELQFTVTGGNKVISGVSLSPRSTRAYLKTSLRCKQESLRIKN-GGKKSPV 93

Query: 70  GKFPANA-GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNT-KNTSMDDPKTP 129
           GKFP+NA GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNN+T KNTSMDDPKTP
Sbjct: 94  GKFPSNAVGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNSTNKNTSMDDPKTP 153

Query: 130 LTRQRNRKPNIDDSELRARRKREKQEKFQSKRTE-SHSPSLQRVRSRINFKVVSPPTKRD 189
           LTRQRNRKPN++DSELRARRKREKQEKFQSKR E SHSPSLQRVRSRINFKVVSPPTKRD
Sbjct: 154 LTRQRNRKPNLEDSELRARRKREKQEKFQSKRIESSHSPSLQRVRSRINFKVVSPPTKRD 213

Query: 190 VVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSPVITKTRQQT 249
           VVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSS+N SQQPKFCRTKSPVI KTRQQT
Sbjct: 214 VVDKENARYLANRVSPRNRPWTKKTILFPNPLFLSSDNPSQQPKFCRTKSPVIAKTRQQT 273

Query: 250 PHKFLIKSPASASKFQVKIKSP-------------------PVVITRSPTRSVVITRSPT 309
           PHKFLIKSP SASKFQVKI  P                   PVVITRSPTR V+ITRSPT
Sbjct: 274 PHKFLIKSPVSASKFQVKISPPVVIKRSPTRPVVITRSPRRPVVITRSPTRPVMITRSPT 333

Query: 310 RQVSLSKQSPKRST-ASKLRRSFSPSRLVASKLRQPFSPARLTASKLRQSFSPSRLAARL 369
           RQ+S SK SPKRST  SKLRRSFSPSRLVASKLRQPFSPA+LTASKLRQSFSPSRLAARL
Sbjct: 334 RQISSSKLSPKRSTVVSKLRRSFSPSRLVASKLRQPFSPAKLTASKLRQSFSPSRLAARL 393

Query: 370 VSPLKSRKSVQKYDGNINLSGLKQRP-TNIQMRI 380
           VSPLKSRKSVQKYDGNINLSGLKQRP  NIQMRI
Sbjct: 394 VSPLKSRKSVQKYDGNINLSGLKQRPINNIQMRI 426

[Close]

BLAST of Lsi11G005440 vs. TAIR 10
Match: AT3G05330.1 (cyclin family )

HSP 1 Score: 309.3 bits (791), Expect = 4.3e-84
Identity = 208/423 (49.17%), Postives = 275/423 (65.01%), Query Frame = 0


Query: 9   SKVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESVRVKNGGGRKSP 68
           +KV+ CM RLQELQ+T+ GG KV+SGV+LSPRSTR YLKTSLRCKQE++R+KN   +KSP
Sbjct: 29  NKVDKCMERLQELQYTIAGGTKVVSGVNLSPRSTRIYLKTSLRCKQETLRIKNATNKKSP 88

Query: 69  VGKFPANAGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTKNTSM------- 128
           VGKFPA++ G+W++MSLPAML+GET+ EIL AS+  R++V+A+    ++ +         
Sbjct: 89  VGKFPASSPGDWRKMSLPAMLLGETVNEILQASQVTRDIVDAIAPKKSRKSRRLTMSQED 148

Query: 129 DDPKTPLTRQRNRKPNID--DSELRARRKREKQEKFQSKRTESHS-PSLQRVRSRINFKV 188
           D PKTP T+Q++R+ N +   S ++ARRK+EK    Q++R+ES S PSLQR RSRI F+ 
Sbjct: 149 DGPKTPETQQKSREQNPETVSSNIKARRKKEK----QNRRSESDSPPSLQRARSRIAFRT 208

Query: 189 VSPPTKRDVVDKENA-RYLANRVSPRNRPWTKKTILFPNPLFLSSENSSQQPKFCRTKSP 248
           +SP  K +  + EN+ R+LANRVSP+++PW KK +LFPNPLF+S   ++QQ KF RT SP
Sbjct: 209 ISPQVKGN--NGENSFRHLANRVSPKHKPWVKKAVLFPNPLFISG-TATQQAKFSRTMSP 268

Query: 249 VIT-------KTRQQTPHKFLIKS-PASASKFQVKIKSPPVVITRSPTR--------SVV 308
           VI        K  ++TP+KFLIKS P SASKFQVKI+SPP V+  SPTR        S  
Sbjct: 269 VIARNEISSIKNNKETPYKFLIKSPPTSASKFQVKIRSPPKVLV-SPTRNGSNSVRKSPR 328

Query: 309 ITRSPTRQVSL-------------SKQSPKRSTASKLRRSFSPSRLVASKLRQ------- 355
            +RSPTR V+L              K+SPK STA+KLRRSF+P+R  ++  R+       
Sbjct: 329 GSRSPTRTVNLGKKSASISPIRNTGKRSPKLSTAAKLRRSFTPTRNGSNLARKSSISPKR 388

The following BLAST results are available for this feature:

BLAST of Lsi11G005440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q197W8	9.6e-89	49.22	Microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=TAN PE=1 ...	[more]
Q84M91	6.0e-83	49.17	Probable microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FUH9	2.3e-58	43.70	Microtubule-binding protein TANGLED1 OS=Zea mays OX=4577 GN=TAN1 PE=2 SV=1	[more]

BLAST of Lsi11G005440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U154	3.1e-175	88.35	Microtubule-binding protein TANGLED OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3D444	3.1e-175	88.35	Microtubule-binding protein TANGLED OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A6YTD5	7.7e-174	87.85	Microtubule binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BZ63	7.7e-174	87.85	microtubule-binding protein TANGLED OS=Cucumis melo OX=3656 GN=LOC103495028 PE=4...	[more]
A0A6J1KAM7	1.9e-164	87.73	microtubule-binding protein TANGLED OS=Cucurbita maxima OX=3661 GN=LOC111493748 ...	[more]

BLAST of Lsi11G005440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877022.1	5.6e-187	95.96	microtubule-binding protein TANGLED [Benincasa hispida]	[more]
TYK18310.1	6.4e-175	88.35	microtubule-binding protein TANGLED [Cucumis melo var. makuwa]	[more]
KAA0047966.1	6.4e-175	88.35	microtubule-binding protein TANGLED [Cucumis melo var. makuwa]	[more]
XP_008454676.1	1.6e-173	87.85	PREDICTED: microtubule-binding protein TANGLED [Cucumis melo] >ABR67412.1 microt...	[more]
XP_011648821.1	1.9e-171	87.56	microtubule-binding protein TANGLED [Cucumis sativus] >KAE8651599.1 hypothetical...	[more]

BLAST of Lsi11G005440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05330.1	4.3e-84	49.17	cyclin family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..166
IPR044709	Microtubule-binding protein TANGLED1	PANTHER	PTHR35728	MICROTUBULE-BINDING PROTEIN TANGLED-RELATED	coord: 9..316 coord: 324..374

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G005440.1	Lsi11G005440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:2000694	regulation of phragmoplast microtubule organization
cellular_component	GO:0005875	microtubule associated complex
cellular_component	GO:0009574	preprophase band
molecular_function	GO:0008017	microtubule binding